HEADER TRANSFERASE 16-MAR-24 9EP0 TITLE DOLICHYL PHOSPHATE MANNOSE SYNTHASE IN COMPLEX WITH DONOR (GDP-MAN) TITLE 2 AND TRACES OF ACCEPTOR (DOL55P) AND PRODUCT (DOL55P-MAN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DOLICHOL MONOPHOSPHATE MANNOSE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: N-TERMINAL HEXA-HISTDINE TAG AND TEV PROTEASE CLEAVAGE COMPND 6 SITE ADDED BY THE EXPRESSION PLASMID SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS DSM 3638; SOURCE 3 ORGANISM_TAXID: 186497; SOURCE 4 STRAIN: DSM 3638; SOURCE 5 GENE: PF0058; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS DOLICHYL PHOSPHATE MANNOSE SYNTHASE, ENZYME, INTEGRAL MEMBRANE KEYWDS 2 PROTEIN, PROTEIN GLYCOSYLATION, GLYCOSYLPHOSPHATIDYLINOSITOL KEYWDS 3 SYNTHESIS, GDP-MANNOSE, DOLICHYL MONOPHOSPHATE, DOLICHOL KEYWDS 4 MONOPHOSPHATE MANNOSE, DONOR-ACCEPTOR AND PRODUCT COMPLEX, KEYWDS 5 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.GANDINI,M.M.KESKITALO,T.REICHENBACH,C.DIVNE REVDAT 2 15-APR-26 9EP0 1 JRNL REVDAT 1 01-OCT-25 9EP0 0 JRNL AUTH R.GANDINI,M.M.KESKITALO,T.REICHENBACH,D.C.KALYANI,C.DIVNE JRNL TITL CRYSTALLOGRAPHIC DATA FOR PYROCOCCUS FURIOSUS JRNL TITL 2 DOLICHYLPHOSPHATE MANNOSE SYNTHASE SUGGEST THAT THE ENZYME JRNL TITL 3 COULD FLIP ITS GLYCOLIPID PRODUCT. JRNL REF SCI REP V. 16 2026 JRNL REFN ESSN 2045-2322 JRNL PMID 41826688 JRNL DOI 10.1038/S41598-026-44343-5 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.2_4158: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 14315 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.301 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 6.2400 - 4.9600 1.00 1308 150 0.2221 0.2457 REMARK 3 2 4.9600 - 4.3300 1.00 1309 140 0.1927 0.2617 REMARK 3 3 4.3300 - 3.9400 1.00 1292 143 0.2188 0.3229 REMARK 3 4 3.9400 - 3.6500 1.00 1277 144 0.2386 0.3022 REMARK 3 5 3.6500 - 3.4400 1.00 1271 147 0.2639 0.3441 REMARK 3 6 3.4400 - 3.2700 1.00 1250 137 0.2754 0.3542 REMARK 3 7 3.2700 - 3.1200 0.99 1290 140 0.3107 0.4102 REMARK 3 8 3.1200 - 3.0000 0.99 1245 151 0.3759 0.4349 REMARK 3 9 3.0000 - 2.9000 0.99 1257 136 0.5024 0.5155 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.550 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 89.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2924 REMARK 3 ANGLE : 1.183 3963 REMARK 3 CHIRALITY : 0.058 452 REMARK 3 PLANARITY : 0.015 476 REMARK 3 DIHEDRAL : 10.170 423 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9EP0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1292137361. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14327 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 43.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 13.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM CHLORIDE, 0.1 M REMARK 280 TRISODIUM CITRATE (PH 5.5), 37% (V/V) PENTAERYTHRITOL REMARK 280 PROPOXYLATE (5/4 PO/OH), 50 MM HEPES (PH 7.5), 150 MM NACL, 10% REMARK 280 (V/V) GLYCEROL, 0.05% LDAO, 5 MM GDP-MANNOSE, 5 MM MGCL2, 0.25 REMARK 280 MM C55 DOLICHYL PHOSPHATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.51000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.51000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.90000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 72.62500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.90000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 72.62500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.51000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.90000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 72.62500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 49.51000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.90000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 72.62500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 ALA A 203 REMARK 465 ARG A 204 REMARK 465 GLY A 205 REMARK 465 GLU A 206 REMARK 465 SER A 207 REMARK 465 LYS A 208 REMARK 465 LEU A 209 REMARK 465 LYS A 210 REMARK 465 GLY A 211 REMARK 465 LYS A 212 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CA GLY A 29 NH1 ARG A 290 8455 1.80 REMARK 500 OE2 GLU A 51 NZ LYS A 191 8455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 306 CB - CG - CD2 ANGL. DEV. = -12.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 13 -61.20 -142.17 REMARK 500 ASN A 31 99.41 -66.15 REMARK 500 PRO A 57 94.28 -68.02 REMARK 500 SER A 190 -51.58 -134.29 REMARK 500 TRP A 284 -73.32 -132.19 REMARK 500 VAL A 348 -66.56 -99.26 REMARK 500 TRP A 350 66.03 -116.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 13 0.10 SIDE CHAIN REMARK 500 ARG A 290 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MJC A 403 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 91 OD2 REMARK 620 2 GLN A 93 OE1 78.7 REMARK 620 3 GDD A 400 O2A 98.1 159.3 REMARK 620 4 GDD A 400 O2B 169.3 95.9 83.8 REMARK 620 N 1 2 3 DBREF 9EP0 A 1 352 UNP Q8U4M3 Q8U4M3_PYRFU 1 352 SEQADV 9EP0 MET A -21 UNP Q8U4M3 INITIATING METHIONINE SEQADV 9EP0 HIS A -20 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 HIS A -19 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 HIS A -18 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 HIS A -17 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 HIS A -16 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 HIS A -15 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 SER A -14 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 SER A -13 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 GLY A -12 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 VAL A -11 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 ASP A -10 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 LEU A -9 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 GLY A -8 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 THR A -7 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 GLU A -6 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 ASN A -5 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 LEU A -4 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 TYR A -3 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 PHE A -2 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 GLN A -1 UNP Q8U4M3 EXPRESSION TAG SEQADV 9EP0 SER A 0 UNP Q8U4M3 EXPRESSION TAG SEQRES 1 A 374 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 374 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS VAL SER SEQRES 3 A 374 VAL ILE ILE PRO THR TYR ASN GLU ARG GLU ASN LEU GLU SEQRES 4 A 374 GLU LEU PHE SER ARG ILE ASP ASN ALA LEU GLN GLY LEU SEQRES 5 A 374 ASN TYR GLU ILE VAL VAL VAL ASP ASP ASP SER PRO ASP SEQRES 6 A 374 ARG THR TRP GLU LYS ALA GLN GLU LEU SER SER LYS TYR SEQRES 7 A 374 PRO VAL LYS VAL ILE ARG ARG THR LYS GLU LYS GLY LEU SEQRES 8 A 374 SER SER ALA VAL ILE ARG GLY PHE LYS GLU ALA SER GLY SEQRES 9 A 374 ASP VAL PHE VAL VAL MET ASP ALA ASP LEU GLN HIS PRO SEQRES 10 A 374 PRO GLU VAL ILE PRO LYS LEU ILE GLU ALA ILE LYS ASN SEQRES 11 A 374 GLY SER ASP ILE ALA ILE GLY SER ARG TYR VAL LYS GLY SEQRES 12 A 374 GLY LYS VAL GLU ASN TRP PRO PHE TYR ARG LYS LEU ILE SEQRES 13 A 374 SER LYS GLY ALA ILE MET VAL GLY ARG ILE ALA LEU PRO SEQRES 14 A 374 LYS ILE ARG ASP ILE LYS ASP PRO VAL SER GLY PHE PHE SEQRES 15 A 374 ALA LEU ARG LYS GLU VAL VAL GLU GLY VAL GLU LEU ASN SEQRES 16 A 374 PRO ILE GLY PHE LYS ILE LEU MET GLU ILE LEU ILE LYS SEQRES 17 A 374 GLY LYS TYR SER LYS VAL VAL GLU VAL PRO PHE THR PHE SEQRES 18 A 374 GLY ILE ARG ALA ARG GLY GLU SER LYS LEU LYS GLY LYS SEQRES 19 A 374 THR ILE PHE GLU TYR LEU ARG HIS ILE TYR ARG LEU MET SEQRES 20 A 374 LYS TRP GLU GLY GLU ILE ASP ARG ILE VAL LYS PHE SER SEQRES 21 A 374 ILE VAL GLY LEU SER GLY ILE LEU VAL ASN GLU GLY PHE SEQRES 22 A 374 LEU TRP LEU PHE VAL ASN LEU GLY ILE PRO LYS GLU ILE SEQRES 23 A 374 ALA VAL ILE PRO ALA VAL GLU LEU SER ILE LEU ASN ASN SEQRES 24 A 374 PHE PHE TRP ASN ASP ILE TRP THR PHE LYS ASP ILE ARG SEQRES 25 A 374 ARG GLY SER ILE PHE SER ARG LEU LEU LYS PHE HIS ILE SEQRES 26 A 374 ALA ALA LEU SER GLY ALA VAL VAL ASN PHE ILE VAL TYR SEQRES 27 A 374 TRP ILE LEU LEU PHE LEU GLY ILE HIS TYR LEU ILE ALA SEQRES 28 A 374 ASN LEU VAL GLY ILE VAL LEU SER PHE GLY VAL ARG TYR SEQRES 29 A 374 VAL ILE ASN ARG HIS VAL THR TRP ALA THR HET GDD A 400 39 HET MG A 401 1 HET EFS A 402 7 HET MJC A 403 41 HETNAM GDD GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE HETNAM MG MAGNESIUM ION HETNAM EFS ETHYL DIHYDROGEN PHOSPHATE HETNAM MJC DOLICHYL PHOSPHATE MANNOSE FORMUL 2 GDD C16 H25 N5 O16 P2 FORMUL 3 MG MG 2+ FORMUL 4 EFS C2 H7 O4 P FORMUL 5 MJC C61 H103 O9 P HELIX 1 AA1 ASN A 15 LEU A 27 1 13 HELIX 2 AA2 TRP A 46 SER A 53 1 8 HELIX 3 AA3 GLY A 68 ALA A 80 1 13 HELIX 4 AA4 PRO A 95 GLU A 97 5 3 HELIX 5 AA5 VAL A 98 ASN A 108 1 11 HELIX 6 AA6 PRO A 128 LEU A 146 1 19 HELIX 7 AA7 PRO A 147 ARG A 150 5 4 HELIX 8 AA8 GLU A 165 VAL A 167 5 3 HELIX 9 AA9 LYS A 178 GLY A 187 1 10 HELIX 10 AB1 ILE A 214 GLU A 228 1 15 HELIX 11 AB2 GLY A 229 LEU A 258 1 30 HELIX 12 AB3 PRO A 261 TRP A 284 1 24 HELIX 13 AB4 PHE A 286 ARG A 290 5 5 HELIX 14 AB5 SER A 293 LEU A 322 1 30 HELIX 15 AB6 HIS A 325 VAL A 348 1 24 SHEET 1 AA1 7 VAL A 58 ARG A 62 0 SHEET 2 AA1 7 ASN A 31 ASP A 38 1 N VAL A 36 O ILE A 61 SHEET 3 AA1 7 LYS A 2 THR A 9 1 N ILE A 7 O VAL A 35 SHEET 4 AA1 7 VAL A 84 VAL A 87 1 O VAL A 86 N ILE A 6 SHEET 5 AA1 7 PHE A 160 ARG A 163 -1 O LEU A 162 N PHE A 85 SHEET 6 AA1 7 ILE A 112 SER A 116 -1 N ALA A 113 O ALA A 161 SHEET 7 AA1 7 VAL A 192 PRO A 196 1 O VAL A 195 N ILE A 114 SHEET 1 AA2 2 LYS A 123 VAL A 124 0 SHEET 2 AA2 2 THR A 198 PHE A 199 1 O PHE A 199 N LYS A 123 LINK OD2 ASP A 91 MG MG A 401 1555 1555 2.05 LINK OE1 GLN A 93 MG MG A 401 1555 1555 2.23 LINK O2A GDD A 400 MG MG A 401 1555 1555 1.91 LINK O2B GDD A 400 MG MG A 401 1555 1555 2.12 CISPEP 1 THR A 45 TRP A 46 0 6.68 CRYST1 87.800 145.250 99.020 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011390 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006885 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010099 0.00000 CONECT 733 2812 CONECT 749 2812 CONECT 2773 2774 CONECT 2774 2773 2775 2776 CONECT 2775 2774 2779 CONECT 2776 2774 2777 CONECT 2777 2776 2778 2783 CONECT 2778 2777 2779 2781 CONECT 2779 2775 2778 2780 CONECT 2780 2779 CONECT 2781 2778 2782 CONECT 2782 2781 2783 CONECT 2783 2777 2782 2784 CONECT 2784 2783 2785 2790 CONECT 2785 2784 2786 2787 CONECT 2786 2785 CONECT 2787 2785 2788 2789 CONECT 2788 2787 CONECT 2789 2787 2790 2791 CONECT 2790 2784 2789 CONECT 2791 2789 2792 CONECT 2792 2791 2793 CONECT 2793 2792 2794 2795 2796 CONECT 2794 2793 CONECT 2795 2793 2812 CONECT 2796 2793 2797 CONECT 2797 2796 2798 2799 2800 CONECT 2798 2797 2812 CONECT 2799 2797 CONECT 2800 2797 2801 CONECT 2801 2800 2802 2806 CONECT 2802 2801 2803 CONECT 2803 2802 2804 2810 CONECT 2804 2803 2805 CONECT 2805 2804 CONECT 2806 2801 2807 2808 CONECT 2807 2806 CONECT 2808 2806 2809 2810 CONECT 2809 2808 CONECT 2810 2803 2808 2811 CONECT 2811 2810 CONECT 2812 733 749 2795 2798 CONECT 2813 2814 CONECT 2814 2813 2815 CONECT 2815 2814 2816 CONECT 2816 2815 2817 2818 2819 CONECT 2817 2816 CONECT 2818 2816 CONECT 2819 2816 CONECT 2820 2821 2822 2854 CONECT 2821 2820 2853 CONECT 2822 2820 2823 CONECT 2823 2822 2826 CONECT 2824 2825 CONECT 2825 2824 2826 2855 CONECT 2826 2823 2825 CONECT 2827 2836 2856 CONECT 2828 2856 CONECT 2829 2830 2857 CONECT 2830 2829 2831 CONECT 2831 2830 2832 2833 CONECT 2832 2831 CONECT 2833 2831 2858 CONECT 2834 2835 2858 CONECT 2835 2834 2859 2860 CONECT 2836 2827 2855 CONECT 2837 2838 2843 2847 CONECT 2838 2837 2839 2844 CONECT 2839 2838 2840 2845 CONECT 2840 2839 2841 2846 CONECT 2841 2840 2842 2847 CONECT 2842 2841 2848 CONECT 2843 2837 2849 CONECT 2844 2838 CONECT 2845 2839 CONECT 2846 2840 CONECT 2847 2837 2841 CONECT 2848 2842 CONECT 2849 2843 2850 2851 2852 CONECT 2850 2849 2853 CONECT 2851 2849 CONECT 2852 2849 CONECT 2853 2821 2850 CONECT 2854 2820 CONECT 2855 2825 2836 CONECT 2856 2827 2828 2857 CONECT 2857 2829 2856 CONECT 2858 2833 2834 CONECT 2859 2835 CONECT 2860 2835 MASTER 353 0 4 15 9 0 0 6 2859 1 90 29 END