HEADER HYDROLASE 26-MAR-24 9ETK TITLE CRYSTAL STRUCTURE OF VIBRIO CHOLERAE RNASE AM COMPND MOL_ID: 1; COMPND 2 MOLECULE: METAL-DEPENDENT PHOSPHOESTERASES (PHP FAMILY); COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHP DOMAIN-CONTAINING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: D6U24_06320, ERS013186_00176, F0H40_05235, I7465_04955; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS RNASE, EXORIBONUCLEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.D.LORMAND,H.SONDERMANN REVDAT 1 11-SEP-24 9ETK 0 JRNL AUTH J.D.LORMAND,H.SONDERMANN JRNL TITL CRYSTAL STRUCTURE OF VIBRIO CHOLERASE RNASE AM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.LIEBSCHNER,P.V.AFONINE,M.L.BAKER,G.BUNKOCZI,V.B.CHEN, REMARK 1 AUTH 2 T.I.CROLL,B.HINTZE,L.W.HUNG,S.JAIN,A.J.MCCOY,N.W.MORIARTY, REMARK 1 AUTH 3 R.D.OEFFNER,B.K.POON,M.G.PRISANT,R.J.READ,J.S.RICHARDSON, REMARK 1 AUTH 4 D.C.RICHARDSON,M.D.SAMMITO,O.V.SOBOLEV,D.H.STOCKWELL, REMARK 1 AUTH 5 T.C.TERWILLIGER,A.G.URZHUMTSEV,L.L.VIDEAU,C.J.WILLIAMS, REMARK 1 AUTH 6 P.D.ADAMS REMARK 1 TITL MACROMOLECULAR STRUCTURE DETERMINATION USING X-RAYS, REMARK 1 TITL 2 NEUTRONS AND ELECTRONS: RECENT DEVELOPMENTS IN PHENIX REMARK 1 REF ACTA CRYSTALLOGR., SECT. D: V. 75 861 2019 REMARK 1 REF 2 BIOL. CRYSTALLOGR. REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 31588918 REMARK 1 DOI 10.1107/S2059798319011471 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21_5207 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 99047 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.810 REMARK 3 FREE R VALUE TEST SET COUNT : 3776 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5900 - 4.4400 1.00 3548 140 0.1484 0.1775 REMARK 3 2 4.4300 - 3.5200 1.00 3566 141 0.1246 0.1245 REMARK 3 3 3.5200 - 3.0800 1.00 3535 143 0.1369 0.1612 REMARK 3 4 3.0800 - 2.8000 1.00 3534 140 0.1481 0.1805 REMARK 3 5 2.8000 - 2.6000 1.00 3575 141 0.1444 0.1809 REMARK 3 6 2.5900 - 2.4400 1.00 3562 135 0.1425 0.1869 REMARK 3 7 2.4400 - 2.3200 1.00 3565 143 0.1314 0.1583 REMARK 3 8 2.3200 - 2.2200 1.00 3537 142 0.1397 0.1782 REMARK 3 9 2.2200 - 2.1300 1.00 3535 141 0.1311 0.1611 REMARK 3 10 2.1300 - 2.0600 1.00 3521 139 0.1232 0.1471 REMARK 3 11 2.0600 - 2.0000 1.00 3557 140 0.1239 0.1705 REMARK 3 12 2.0000 - 1.9400 1.00 3588 140 0.1331 0.1938 REMARK 3 13 1.9400 - 1.8900 1.00 3535 139 0.1515 0.2281 REMARK 3 14 1.8900 - 1.8400 1.00 3595 142 0.1769 0.1978 REMARK 3 15 1.8400 - 1.8000 1.00 3522 144 0.1721 0.1968 REMARK 3 16 1.8000 - 1.7600 1.00 3547 140 0.1630 0.1941 REMARK 3 17 1.7600 - 1.7300 1.00 3550 139 0.1681 0.2097 REMARK 3 18 1.7300 - 1.6900 1.00 3567 141 0.1639 0.1874 REMARK 3 19 1.6900 - 1.6600 1.00 3533 139 0.1704 0.2506 REMARK 3 20 1.6600 - 1.6300 1.00 3508 144 0.1786 0.2298 REMARK 3 21 1.6300 - 1.6100 1.00 3621 144 0.1890 0.2412 REMARK 3 22 1.6100 - 1.5800 1.00 3445 130 0.2237 0.2486 REMARK 3 23 1.5800 - 1.5600 1.00 3676 145 0.2375 0.3167 REMARK 3 24 1.5600 - 1.5400 1.00 3486 138 0.2812 0.2973 REMARK 3 25 1.5400 - 1.5200 0.98 3475 141 0.3347 0.4428 REMARK 3 26 1.5200 - 1.5000 0.94 3386 137 0.4003 0.4061 REMARK 3 27 1.5000 - 1.4800 0.91 3202 128 0.4421 0.4351 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.217 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2371 REMARK 3 ANGLE : 0.886 3233 REMARK 3 CHIRALITY : 0.083 341 REMARK 3 PLANARITY : 0.009 422 REMARK 3 DIHEDRAL : 14.254 873 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9ETK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1292137570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03285 REMARK 200 MONOCHROMATOR : LN2 COOLED DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99127 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.479 REMARK 200 RESOLUTION RANGE LOW (A) : 45.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS (PH 5.0), 0.2 M REMARK 280 AMMONIUM SULFATE AND 22.5 % PEG 3350, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 23.73200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 81.95950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.73200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 81.95950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 280 REMARK 465 ASN A 281 REMARK 465 ARG A 282 REMARK 465 VAL A 283 REMARK 465 GLU A 284 REMARK 465 ARG A 285 REMARK 465 LEU A 286 REMARK 465 ASP A 287 REMARK 465 GLU A 288 REMARK 465 GLU A 289 REMARK 465 GLU A 290 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 464 O HOH A 592 2.09 REMARK 500 NZ LYS A 139 O HOH A 401 2.10 REMARK 500 O HOH A 437 O HOH A 631 2.16 REMARK 500 O HOH A 595 O HOH A 621 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 12 -109.76 -126.26 REMARK 500 THR A 115 -102.51 -130.30 REMARK 500 LEU A 158 -27.32 75.97 REMARK 500 HIS A 191 65.66 28.25 REMARK 500 GLN A 224 137.47 -175.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 310 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 6 NE2 REMARK 620 2 HIS A 8 NE2 101.4 REMARK 620 3 GLU A 65 OE1 89.0 90.6 REMARK 620 4 ASP A 248 OD1 85.3 85.4 172.3 REMARK 620 5 SO4 A 308 O1 170.9 85.6 96.8 89.5 REMARK 620 6 HOH A 405 O 97.3 159.6 98.1 87.9 75.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 312 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 13 OD1 REMARK 620 2 ASP A 13 OD2 59.1 REMARK 620 3 SO4 A 308 O1 133.5 156.5 REMARK 620 4 SO4 A 308 O3 161.0 102.5 62.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 311 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 65 OE2 REMARK 620 2 SO4 A 308 O2 104.8 REMARK 620 3 HOH A 403 O 172.3 67.9 REMARK 620 4 HOH A 405 O 89.4 81.5 87.2 REMARK 620 N 1 2 3 DBREF1 9ETK A 1 290 UNP A0A0H5Y1H1_VIBCL DBREF2 9ETK A A0A0H5Y1H1 1 290 SEQADV 9ETK GLY A 0 UNP A0A0H5Y1H EXPRESSION TAG SEQRES 1 A 291 GLY MET ARG ILE ASP LEU HIS SER HIS THR THR ALA SER SEQRES 2 A 291 ASP GLY ARG PHE THR TYR GLN GLN LEU ILE ASP ARG ALA SEQRES 3 A 291 VAL SER PHE GLU ILE ASP VAL LEU ALA ILE THR ASP HIS SEQRES 4 A 291 ASP THR VAL ALA ALA LEU ALA ASP ALA ARG ALA TYR ILE SEQRES 5 A 291 ALA GLN GLN GLN TYR PRO LEU GLN LEU VAL ASN GLY ILE SEQRES 6 A 291 GLU ILE SER THR VAL TRP GLN ASN LYS ASP ILE HIS ILE SEQRES 7 A 291 VAL GLY LEU ASN ILE ASP PRO ASN SER GLU ALA LEU GLY SEQRES 8 A 291 GLN LEU ILE ALA ARG GLN GLN GLN ARG ARG VAL GLU ARG SEQRES 9 A 291 ALA GLU LEU ILE ALA HIS ARG LEU GLN LYS ALA THR ARG SEQRES 10 A 291 GLU GLY VAL LEU GLU GLU VAL GLN HIS ILE ALA ASP GLY SEQRES 11 A 291 ALA PRO ILE THR ARG ALA HIS PHE ALA LYS TRP LEU VAL SEQRES 12 A 291 ASP ASN GLY TYR ALA THR ASN MET GLN GLN VAL PHE LYS SEQRES 13 A 291 LYS TYR LEU THR ARG ASP ASN PRO GLY TYR VAL PRO PRO SEQRES 14 A 291 ASN TRP CYS SER MET SER GLU ALA VAL SER ALA ILE HIS SEQRES 15 A 291 ALA ALA GLY GLY GLN ALA VAL LEU ALA HIS PRO GLY ARG SEQRES 16 A 291 TYR ASP LEU THR ALA LYS TRP LEU LYS ARG LEU MET THR SEQRES 17 A 291 ALA PHE VAL GLU ALA GLY GLY ASP ALA MET GLU VAL ALA SEQRES 18 A 291 GLN PRO GLN GLN SER PRO GLN GLU LYS ARG THR LEU GLY SEQRES 19 A 291 ASP TYR ALA MET GLU TYR GLN LEU LEU ALA SER GLN GLY SEQRES 20 A 291 SER ASP PHE HIS TYR PRO SER PRO TRP MET GLU LEU GLY SEQRES 21 A 291 ARG ASN LEU TRP LEU PRO ALA GLY VAL GLU PRO VAL TRP SEQRES 22 A 291 LYS ASP TRP GLY LEU SER PRO SER ASN ARG VAL GLU ARG SEQRES 23 A 291 LEU ASP GLU GLU GLU HET GOL A 301 6 HET GOL A 302 6 HET GOL A 303 6 HET GOL A 304 6 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET SO4 A 308 5 HET SO4 A 309 5 HET MN A 310 1 HET MG A 311 1 HET MG A 312 1 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 4(C3 H8 O3) FORMUL 6 SO4 5(O4 S 2-) FORMUL 11 MN MN 2+ FORMUL 12 MG 2(MG 2+) FORMUL 14 HOH *250(H2 O) HELIX 1 AA1 THR A 17 PHE A 28 1 12 HELIX 2 AA2 ALA A 43 GLN A 55 1 13 HELIX 3 AA3 SER A 86 LYS A 113 1 28 HELIX 4 AA4 GLY A 118 ASP A 128 1 11 HELIX 5 AA5 THR A 133 ASN A 144 1 12 HELIX 6 AA6 ASN A 149 TYR A 157 1 9 HELIX 7 AA7 MET A 173 ALA A 183 1 11 HELIX 8 AA8 HIS A 191 ASP A 196 5 6 HELIX 9 AA9 THR A 198 ALA A 212 1 15 HELIX 10 AB1 SER A 225 TYR A 239 1 15 SHEET 1 AA1 4 ILE A 3 ASP A 4 0 SHEET 2 AA1 4 VAL A 32 ILE A 35 1 O VAL A 32 N ASP A 4 SHEET 3 AA1 4 GLN A 59 TRP A 70 1 O VAL A 61 N LEU A 33 SHEET 4 AA1 4 CYS A 171 SER A 172 1 O CYS A 171 N VAL A 69 SHEET 1 AA2 7 ILE A 3 ASP A 4 0 SHEET 2 AA2 7 VAL A 32 ILE A 35 1 O VAL A 32 N ASP A 4 SHEET 3 AA2 7 GLN A 59 TRP A 70 1 O VAL A 61 N LEU A 33 SHEET 4 AA2 7 LYS A 73 LEU A 80 -1 O ILE A 77 N ILE A 66 SHEET 5 AA2 7 GLN A 186 LEU A 189 -1 O VAL A 188 N VAL A 78 SHEET 6 AA2 7 ALA A 216 ALA A 220 1 O GLU A 218 N LEU A 189 SHEET 7 AA2 7 LEU A 242 GLN A 245 1 O SER A 244 N VAL A 219 LINK NE2 HIS A 6 MN MN A 310 1555 1555 2.15 LINK NE2 HIS A 8 MN MN A 310 1555 1555 2.10 LINK OD1 ASP A 13 MG MG A 312 1555 1555 2.32 LINK OD2 ASP A 13 MG MG A 312 1555 1555 2.16 LINK OE1 GLU A 65 MN MN A 310 1555 1555 2.14 LINK OE2 GLU A 65 MG MG A 311 1555 1555 2.05 LINK OD1 ASP A 248 MN MN A 310 1555 1555 2.26 LINK O1 SO4 A 308 MN MN A 310 1555 1555 2.19 LINK O2 SO4 A 308 MG MG A 311 1555 1555 1.98 LINK O1 SO4 A 308 MG MG A 312 1555 1555 2.39 LINK O3 SO4 A 308 MG MG A 312 1555 1555 2.40 LINK MN MN A 310 O HOH A 405 1555 1555 2.18 LINK MG MG A 311 O HOH A 403 1555 1555 2.30 LINK MG MG A 311 O HOH A 405 1555 1555 2.04 CRYST1 47.464 163.919 39.607 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021069 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006101 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025248 0.00000