HEADER OXIDOREDUCTASE 28-MAR-24 9EV4 TITLE PYRUVATE:QUINONE OXIDOREDUCTASE (PQO) FROM CORYNEBACTERIUM GLUTAMICUM TITLE 2 CS176 COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIAMINE PYROPHOSPHATE-REQUIRING ENZYMES [ACETOLACTATE COMPND 3 SYNTHASE, PYRUVATE DEHYDROGENASE (CYTOCHROME), GLYOXYLATE COMPND 4 CARBOLIGASE, PHOSPHONOPYRUVATE DECARBOXYLASE]; COMPND 5 CHAIN: A; COMPND 6 SYNONYM: PYRUVATE:QUINONE OXIDOREDUCTASE; COMPND 7 EC: 1.2.5.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM; SOURCE 3 ORGANISM_TAXID: 1718; SOURCE 4 STRAIN: CS176; SOURCE 5 GENE: CGL2610; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PYRUVATE:QUINONE OXIDOREDUCTASE, PYRUVATE, CARBON METABOLISM, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.DA SILVA LAMEIRA,S.MUENSSINGER,L.YANG,B.J.EIKMANNS,M.BELLINZONI REVDAT 1 07-AUG-24 9EV4 0 JRNL AUTH C.DA SILVA LAMEIRA,S.MUNSSINGER,L.YANG,B.J.EIKMANNS, JRNL AUTH 2 M.BELLINZONI JRNL TITL CORYNEBACTERIUM GLUTAMICUM PYRUVATE:QUINONE OXIDOREDUCTASE: JRNL TITL 2 AN ENIGMATIC METABOLIC ENZYME WITH UNUSUAL STRUCTURAL JRNL TITL 3 FEATURES. JRNL REF FEBS J. 2024 JRNL REFN ISSN 1742-464X JRNL PMID 39080980 JRNL DOI 10.1111/FEBS.17232 REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 60.6 REMARK 3 NUMBER OF REFLECTIONS : 66252 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3344 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.58 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 6.34 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2239 REMARK 3 BIN FREE R VALUE : 0.2855 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 67 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4121 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 621 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.81940 REMARK 3 B22 (A**2) : 0.65560 REMARK 3 B33 (A**2) : -1.47500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.190 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.098 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.093 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.091 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.089 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4273 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5825 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1944 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 750 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4273 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 581 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4328 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 0.96 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.03 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.46 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|3 - 90 } REMARK 3 ORIGIN FOR THE GROUP (A): -12.5462 49.4682 18.4951 REMARK 3 T TENSOR REMARK 3 T11: -0.0858 T22: -0.0143 REMARK 3 T33: -0.0693 T12: -0.0833 REMARK 3 T13: 0.032 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 1.1744 L22: 0.8336 REMARK 3 L33: 2.1844 L12: -0.2541 REMARK 3 L13: 0.2839 L23: -0.0481 REMARK 3 S TENSOR REMARK 3 S11: 0.0538 S12: 0.1289 S13: 0.1352 REMARK 3 S21: 0.1289 S22: -0.0994 S23: -0.364 REMARK 3 S31: 0.1352 S32: -0.364 S33: 0.0456 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|91 - 164 } REMARK 3 ORIGIN FOR THE GROUP (A): -12.648 54.2067 6.9628 REMARK 3 T TENSOR REMARK 3 T11: -0.1387 T22: -0.0158 REMARK 3 T33: -0.067 T12: -0.0396 REMARK 3 T13: 0.0083 T23: -0.0368 REMARK 3 L TENSOR REMARK 3 L11: 0 L22: 1.1837 REMARK 3 L33: 1.0977 L12: -0.0117 REMARK 3 L13: 0.1363 L23: -0.05 REMARK 3 S TENSOR REMARK 3 S11: 0.0552 S12: 0.0402 S13: 0.0944 REMARK 3 S21: 0.0402 S22: -0.101 S23: -0.243 REMARK 3 S31: 0.0944 S32: -0.243 S33: 0.0458 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|165 - 200 } REMARK 3 ORIGIN FOR THE GROUP (A): -2.7645 30.7575 1.5756 REMARK 3 T TENSOR REMARK 3 T11: 0.1766 T22: -0.0861 REMARK 3 T33: -0.0507 T12: -0.046 REMARK 3 T13: -0.035 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 3.3036 L22: 0.9575 REMARK 3 L33: 1.7721 L12: -1.2907 REMARK 3 L13: -0.1835 L23: 0.0783 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: 0.0456 S13: 0.7362 REMARK 3 S21: 0.0456 S22: -0.0419 S23: -0.0668 REMARK 3 S31: 0.7362 S32: -0.0668 S33: 0.0172 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|201 - 328 } REMARK 3 ORIGIN FOR THE GROUP (A): 17.1302 28.1443 11.3011 REMARK 3 T TENSOR REMARK 3 T11: 0.1766 T22: 0.0111 REMARK 3 T33: -0.0327 T12: 0.1834 REMARK 3 T13: -0.0422 T23: 0.0512 REMARK 3 L TENSOR REMARK 3 L11: 0.7739 L22: 0.7797 REMARK 3 L33: 2.7391 L12: 0.0312 REMARK 3 L13: 0.3763 L23: -0.3087 REMARK 3 S TENSOR REMARK 3 S11: 0.152 S12: -0.0361 S13: 0.7462 REMARK 3 S21: -0.0361 S22: -0.1452 S23: 0.4362 REMARK 3 S31: 0.7462 S32: 0.4362 S33: -0.0068 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|329 - 371 } REMARK 3 ORIGIN FOR THE GROUP (A): 23.327 34.0841 33.6267 REMARK 3 T TENSOR REMARK 3 T11: 0.1683 T22: 0.2242 REMARK 3 T33: -0.002 T12: 0.0676 REMARK 3 T13: -0.0995 T23: 0.1088 REMARK 3 L TENSOR REMARK 3 L11: 1.8986 L22: 2.0662 REMARK 3 L33: 0.9302 L12: -0.8991 REMARK 3 L13: -0.4732 L23: 0.0634 REMARK 3 S TENSOR REMARK 3 S11: 0.1739 S12: 0.2563 S13: 0.2778 REMARK 3 S21: 0.2563 S22: -0.1043 S23: 0.5509 REMARK 3 S31: 0.2778 S32: 0.5509 S33: -0.0697 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { A|372 - 462 } REMARK 3 ORIGIN FOR THE GROUP (A): 2.8742 43.3418 30.4278 REMARK 3 T TENSOR REMARK 3 T11: 0.0344 T22: -0.0517 REMARK 3 T33: -0.0774 T12: -0.0764 REMARK 3 T13: -0.0073 T23: 0.0373 REMARK 3 L TENSOR REMARK 3 L11: 1.274 L22: 0.8556 REMARK 3 L33: 2.3499 L12: -0.3646 REMARK 3 L13: 0.0006 L23: -0.3212 REMARK 3 S TENSOR REMARK 3 S11: 0.0577 S12: 0.2534 S13: 0.1294 REMARK 3 S21: 0.2534 S22: -0.0869 S23: 0.1016 REMARK 3 S31: 0.1294 S32: 0.1016 S33: 0.0293 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { A|463 - 519 } REMARK 3 ORIGIN FOR THE GROUP (A): 6.1161 47.9458 45.3884 REMARK 3 T TENSOR REMARK 3 T11: 0.25 T22: 0.0782 REMARK 3 T33: -0.0889 T12: -0.1051 REMARK 3 T13: -0.0303 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 2.682 L22: 4.9865 REMARK 3 L33: 4.7642 L12: -1.6163 REMARK 3 L13: 0.5606 L23: -1.3148 REMARK 3 S TENSOR REMARK 3 S11: -0.1309 S12: 0.609 S13: -0.1943 REMARK 3 S21: 0.609 S22: 0.0974 S23: 0.4321 REMARK 3 S31: -0.1943 S32: 0.4321 S33: 0.0335 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: { A|520 - 577 } REMARK 3 ORIGIN FOR THE GROUP (A): 20.627 40.4907 28.0918 REMARK 3 T TENSOR REMARK 3 T11: 0.1095 T22: 0.163 REMARK 3 T33: 0.026 T12: 0.0221 REMARK 3 T13: -0.0662 T23: 0.0788 REMARK 3 L TENSOR REMARK 3 L11: 0.653 L22: 1.0349 REMARK 3 L33: 0.6763 L12: -0.3157 REMARK 3 L13: 0.1268 L23: -0.4297 REMARK 3 S TENSOR REMARK 3 S11: 0.1444 S12: 0.1156 S13: 0.2218 REMARK 3 S21: 0.1156 S22: -0.208 S23: 0.4662 REMARK 3 S31: 0.2218 S32: 0.4662 S33: 0.0636 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9EV4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1292137449. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.13 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66301 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.474 REMARK 200 RESOLUTION RANGE LOW (A) : 62.973 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 13.84 REMARK 200 R MERGE (I) : 0.10480 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 62.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 13.66 REMARK 200 R MERGE FOR SHELL (I) : 0.07260 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 31.07 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 9EV3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 % (W/V) PEG 4000, 8 % (V/V) REMARK 280 ISOPROPANOL, 0.1 M SODIUM ACETATE, PH 6.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.37000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.01100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 78.52950 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.37000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.01100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 78.52950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.37000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.01100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 78.52950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.37000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.01100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 78.52950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 25560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 67220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 120.02200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 120.02200 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 795 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 868 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1284 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 465 REMARK 465 LEU A 466 REMARK 465 GLY A 467 REMARK 465 MET A 468 REMARK 465 VAL A 469 REMARK 465 LYS A 470 REMARK 465 LEU A 471 REMARK 465 GLU A 472 REMARK 465 MET A 473 REMARK 465 LEU A 474 REMARK 465 VAL A 475 REMARK 465 GLU A 476 REMARK 465 GLY A 477 REMARK 465 GLN A 478 REMARK 465 PRO A 479 REMARK 465 GLU A 480 REMARK 465 PHE A 481 REMARK 465 GLY A 482 REMARK 465 THR A 483 REMARK 465 ASP A 484 REMARK 465 HIS A 485 REMARK 465 GLU A 486 REMARK 465 THR A 578 REMARK 465 PRO A 579 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 37 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 347 CG CD OE1 OE2 REMARK 470 ASN A 352 CG OD1 ND2 REMARK 470 LYS A 355 CG CD CE NZ REMARK 470 GLU A 487 CG CD OE1 OE2 REMARK 470 LEU A 535 CG CD1 CD2 REMARK 470 SER A 536 OG REMARK 470 LYS A 551 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 455 40.39 -80.89 REMARK 500 ASN A 533 35.36 -99.50 REMARK 500 LEU A 535 104.83 -57.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1319 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1320 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A1321 DISTANCE = 5.90 ANGSTROMS DBREF 9EV4 A 1 579 UNP Q8NMG5 Q8NMG5_CORGL 1 579 SEQADV 9EV4 GLY A -1 UNP Q8NMG5 EXPRESSION TAG SEQADV 9EV4 HIS A 0 UNP Q8NMG5 EXPRESSION TAG SEQADV 9EV4 ARG A 3 UNP Q8NMG5 HIS 3 VARIANT SEQADV 9EV4 GLY A 40 UNP Q8NMG5 ASP 40 VARIANT SEQADV 9EV4 LYS A 453 UNP Q8NMG5 GLN 453 VARIANT SEQADV 9EV4 ASP A 492 UNP Q8NMG5 GLU 492 VARIANT SEQADV 9EV4 THR A 508 UNP Q8NMG5 LYS 508 VARIANT SEQADV 9EV4 ASP A 516 UNP Q8NMG5 GLU 516 VARIANT SEQRES 1 A 581 GLY HIS MET ALA ARG SER TYR ALA GLU GLN LEU ILE ASP SEQRES 2 A 581 THR LEU GLU ALA GLN GLY VAL LYS ARG ILE TYR GLY LEU SEQRES 3 A 581 VAL GLY ASP SER LEU ASN PRO ILE VAL ASP ALA VAL ARG SEQRES 4 A 581 GLN SER GLY ILE GLU TRP VAL HIS VAL ARG ASN GLU GLU SEQRES 5 A 581 ALA ALA ALA PHE ALA ALA GLY ALA GLU SER LEU ILE THR SEQRES 6 A 581 GLY GLU LEU ALA VAL CYS ALA ALA SER CYS GLY PRO GLY SEQRES 7 A 581 ASN THR HIS LEU ILE GLN GLY LEU TYR ASP SER HIS ARG SEQRES 8 A 581 ASN GLY ALA LYS VAL LEU ALA ILE ALA SER HIS ILE PRO SEQRES 9 A 581 SER ALA GLN ILE GLY SER THR PHE PHE GLN GLU THR HIS SEQRES 10 A 581 PRO GLU ILE LEU PHE LYS GLU CYS SER GLY TYR CYS GLU SEQRES 11 A 581 MET VAL ASN GLY GLY GLU GLN GLY GLU ARG ILE LEU HIS SEQRES 12 A 581 HIS ALA ILE GLN SER THR MET ALA GLY LYS GLY VAL SER SEQRES 13 A 581 VAL VAL VAL ILE PRO GLY ASP ILE ALA LYS GLU ASP ALA SEQRES 14 A 581 GLY ASP GLY THR TYR SER ASN SER THR ILE SER SER GLY SEQRES 15 A 581 THR PRO VAL VAL PHE PRO ASP PRO THR GLU ALA ALA ALA SEQRES 16 A 581 LEU VAL GLU ALA ILE ASN ASN ALA LYS SER VAL THR LEU SEQRES 17 A 581 PHE CYS GLY ALA GLY VAL LYS ASN ALA ARG ALA GLN VAL SEQRES 18 A 581 LEU GLU LEU ALA GLU LYS ILE LYS SER PRO ILE GLY HIS SEQRES 19 A 581 ALA LEU GLY GLY LYS GLN TYR ILE GLN HIS GLU ASN PRO SEQRES 20 A 581 PHE GLU VAL GLY MET SER GLY LEU LEU GLY TYR GLY ALA SEQRES 21 A 581 CYS VAL ASP ALA SER ASN GLU ALA ASP LEU LEU ILE LEU SEQRES 22 A 581 LEU GLY THR ASP PHE PRO TYR SER ASP PHE LEU PRO LYS SEQRES 23 A 581 ASP ASN VAL ALA GLN VAL ASP ILE ASN GLY ALA HIS ILE SEQRES 24 A 581 GLY ARG ARG THR THR VAL LYS TYR PRO VAL THR GLY ASP SEQRES 25 A 581 VAL ALA ALA THR ILE GLU ASN ILE LEU PRO HIS VAL LYS SEQRES 26 A 581 GLU LYS THR ASP ARG SER PHE LEU ASP ARG MET LEU LYS SEQRES 27 A 581 ALA HIS GLU ARG LYS LEU SER SER VAL VAL GLU THR TYR SEQRES 28 A 581 THR HIS ASN VAL GLU LYS HIS VAL PRO ILE HIS PRO GLU SEQRES 29 A 581 TYR VAL ALA SER ILE LEU ASN GLU LEU ALA ASP LYS ASP SEQRES 30 A 581 ALA VAL PHE THR VAL ASP THR GLY MET CYS ASN VAL TRP SEQRES 31 A 581 HIS ALA ARG TYR ILE GLU ASN PRO GLU GLY THR ARG ASP SEQRES 32 A 581 PHE VAL GLY SER PHE ARG HIS GLY THR MET ALA ASN ALA SEQRES 33 A 581 LEU PRO HIS ALA ILE GLY ALA GLN SER VAL ASP ARG ASN SEQRES 34 A 581 ARG GLN VAL ILE ALA MET CYS GLY ASP GLY GLY LEU GLY SEQRES 35 A 581 MET LEU LEU GLY GLU LEU LEU THR VAL LYS LEU HIS LYS SEQRES 36 A 581 LEU PRO LEU LYS ALA VAL VAL PHE ASN ASN SER SER LEU SEQRES 37 A 581 GLY MET VAL LYS LEU GLU MET LEU VAL GLU GLY GLN PRO SEQRES 38 A 581 GLU PHE GLY THR ASP HIS GLU GLU VAL ASN PHE ALA ASP SEQRES 39 A 581 ILE ALA ALA ALA ALA GLY ILE LYS SER VAL ARG ILE THR SEQRES 40 A 581 ASP PRO THR LYS VAL ARG GLU GLN LEU ALA ASP ALA LEU SEQRES 41 A 581 ALA TYR PRO GLY PRO VAL LEU ILE ASP ILE VAL THR ASP SEQRES 42 A 581 PRO ASN ALA LEU SER ILE PRO PRO THR ILE THR TRP GLU SEQRES 43 A 581 GLN VAL MET GLY PHE SER LYS ALA ALA THR ARG THR VAL SEQRES 44 A 581 PHE GLY GLY GLY VAL GLY ALA MET ILE ASP LEU ALA ARG SEQRES 45 A 581 SER ASN ILE ARG ASN ILE PRO THR PRO HET FAD A 601 53 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 HOH *621(H2 O) HELIX 1 AA1 SER A 4 GLN A 16 1 13 HELIX 2 AA2 GLY A 26 SER A 28 5 3 HELIX 3 AA3 LEU A 29 GLN A 38 1 10 HELIX 4 AA4 GLU A 50 GLY A 64 1 15 HELIX 5 AA5 GLY A 74 HIS A 79 1 6 HELIX 6 AA6 LEU A 80 GLY A 91 1 12 HELIX 7 AA7 PRO A 102 ILE A 106 5 5 HELIX 8 AA8 HIS A 115 PHE A 120 1 6 HELIX 9 AA9 GLY A 132 ALA A 149 1 18 HELIX 10 AB1 ASP A 161 GLU A 165 5 5 HELIX 11 AB2 ASP A 187 ALA A 201 1 15 HELIX 12 AB3 ALA A 210 LYS A 213 5 4 HELIX 13 AB4 ALA A 215 LYS A 227 1 13 HELIX 14 AB5 GLY A 236 GLN A 241 1 6 HELIX 15 AB6 ALA A 258 ALA A 266 1 9 HELIX 16 AB7 TYR A 278 LEU A 282 5 5 HELIX 17 AB8 ASN A 293 ILE A 297 5 5 HELIX 18 AB9 ASP A 310 LEU A 319 1 10 HELIX 19 AC1 PRO A 320 VAL A 322 5 3 HELIX 20 AC2 ARG A 328 THR A 350 1 23 HELIX 21 AC3 ASN A 352 HIS A 356 5 5 HELIX 22 AC4 HIS A 360 ALA A 372 1 13 HELIX 23 AC5 GLY A 383 ILE A 393 1 11 HELIX 24 AC6 ASN A 395 THR A 399 5 5 HELIX 25 AC7 ASN A 413 ASP A 425 1 13 HELIX 26 AC8 GLY A 437 LEU A 439 5 3 HELIX 27 AC9 MET A 441 LYS A 453 1 13 HELIX 28 AD1 ASN A 489 ALA A 497 1 9 HELIX 29 AD2 ASP A 506 THR A 508 5 3 HELIX 30 AD3 LYS A 509 ALA A 519 1 11 HELIX 31 AD4 THR A 542 MET A 547 1 6 HELIX 32 AD5 ALA A 564 ASN A 575 1 12 SHEET 1 AA1 6 GLU A 42 HIS A 45 0 SHEET 2 AA1 6 ARG A 20 GLY A 23 1 N ILE A 21 O VAL A 44 SHEET 3 AA1 6 ALA A 67 ALA A 71 1 O ALA A 70 N TYR A 22 SHEET 4 AA1 6 VAL A 94 HIS A 100 1 O ILE A 97 N CYS A 69 SHEET 5 AA1 6 SER A 154 PRO A 159 1 O SER A 154 N VAL A 94 SHEET 6 AA1 6 TYR A 126 MET A 129 1 N GLU A 128 O VAL A 157 SHEET 1 AA2 6 GLU A 247 MET A 250 0 SHEET 2 AA2 6 ILE A 230 HIS A 232 1 N ILE A 230 O VAL A 248 SHEET 3 AA2 6 VAL A 204 CYS A 208 1 N LEU A 206 O GLY A 231 SHEET 4 AA2 6 LEU A 268 LEU A 272 1 O ILE A 270 N PHE A 207 SHEET 5 AA2 6 VAL A 287 ASP A 291 1 O ALA A 288 N LEU A 271 SHEET 6 AA2 6 TYR A 305 THR A 308 1 O VAL A 307 N GLN A 289 SHEET 1 AA3 6 ASP A 401 GLY A 404 0 SHEET 2 AA3 6 VAL A 377 VAL A 380 1 N PHE A 378 O ASP A 401 SHEET 3 AA3 6 VAL A 430 GLY A 435 1 O MET A 433 N THR A 379 SHEET 4 AA3 6 LYS A 457 ASN A 462 1 O VAL A 459 N CYS A 434 SHEET 5 AA3 6 VAL A 524 VAL A 529 1 O ILE A 526 N ALA A 458 SHEET 6 AA3 6 LYS A 500 ILE A 504 1 N VAL A 502 O ASP A 527 CISPEP 1 VAL A 357 PRO A 358 0 -6.82 CRYST1 68.740 120.022 157.059 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014548 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008332 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006367 0.00000