HEADER HYDROLASE 10-APR-24 9EZ7 TITLE BSMI (NICKING TOP MUTANT) CRYSTALLIZED WITH CA2+ AND COGNATE DSDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BSMI; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (BOTTOM STRAND); COMPND 8 CHAIN: E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (TOP STRAND); COMPND 12 CHAIN: F; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 GENE: BSMIR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 10 ORGANISM_TAXID: 1422; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 14 ORGANISM_TAXID: 1422 KEYWDS RESTRICTION ENDONUCLEASE, DNA CLEAVAGE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.SIESKIND,S.MISSOURY,C.MADRU,I.COMMENGE,G.NIOGRET,M.HOLLENSTEIN, AUTHOR 2 Y.RONDELEZ,A.HAOUZ,P.LEGRAND,L.SAUGUET,M.DELARUE REVDAT 1 02-APR-25 9EZ7 0 JRNL AUTH R.SIESKIND,S.MISSOURY,C.MADRU,I.COMMENGE,G.NIOGRET, JRNL AUTH 2 M.HOLLENSTEIN,Y.RONDELEZ,L.SAUGUET,A.HAOUZ,P.LEGRAND, JRNL AUTH 3 M.DELARUE JRNL TITL CRYSTAL STRUCTURES OF MONOMERIC BSMI RESTRICTION JRNL TITL 2 ENDONUCLEASE REVEAL COORDINATED SEQUENTIAL CLEAVAGE OF TWO JRNL TITL 3 DNA STRANDS. JRNL REF COMMUN BIOL V. 8 387 2025 JRNL REFN ESSN 2399-3642 JRNL PMID 40055548 JRNL DOI 10.1038/S42003-025-07612-Z REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 73.1 REMARK 3 NUMBER OF REFLECTIONS : 39796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1880 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 11.02 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE : 0.3481 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 34 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5417 REMARK 3 NUCLEIC ACID ATOMS : 527 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 476 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.30410 REMARK 3 B22 (A**2) : -1.14190 REMARK 3 B33 (A**2) : 4.44600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.270 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.333 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.214 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.302 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.210 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6145 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8417 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2081 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 963 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6145 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 801 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4609 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.93 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.41 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.89 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { *|* } REMARK 3 ORIGIN FOR THE GROUP (A): 16.5873 -22.8905 -10.5936 REMARK 3 T TENSOR REMARK 3 T11: -0.0704 T22: -0.0428 REMARK 3 T33: 0.0544 T12: -0.002 REMARK 3 T13: -0.0132 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.1757 L22: 0.1695 REMARK 3 L33: 0.1412 L12: 0.0897 REMARK 3 L13: -0.105 L23: -0.0921 REMARK 3 S TENSOR REMARK 3 S11: 0.011 S12: 0.0082 S13: -0.0069 REMARK 3 S21: 0.0082 S22: -0.0064 S23: -0.0022 REMARK 3 S31: -0.0069 S32: -0.0022 S33: -0.0045 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9EZ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-APR-24. REMARK 100 THE DEPOSITION ID IS D_1292137847. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC 1.0.5 REMARK 200 DATA SCALING SOFTWARE : AUTOPROC 1.0.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39820 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.031 REMARK 200 RESOLUTION RANGE LOW (A) : 79.179 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : 0.29700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 69.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 2.38900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, PH 6.5 100 MM CACL2 25% REMARK 280 PEG400 35% GUANIDINE HCL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 49.27500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 66.49450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.27500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 66.49450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 26 CG OD1 ND2 REMARK 470 ASN A 98 CG OD1 ND2 REMARK 470 GLU A 103 CG CD OE1 OE2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 ASP A 209 CG OD1 OD2 REMARK 470 ASN A 248 CG OD1 ND2 REMARK 470 ASP A 249 CG OD1 OD2 REMARK 470 ARG A 266 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 293 CG CD OE1 OE2 REMARK 470 LYS A 329 CG CD CE NZ REMARK 470 MET A 336 CG SD CE REMARK 470 LYS A 452 CG CD CE NZ REMARK 470 ASN A 466 CG OD1 ND2 REMARK 470 ASP A 535 CG OD1 OD2 REMARK 470 GLU A 538 CG CD OE1 OE2 REMARK 470 ASN A 595 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 890 O HOH A 898 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA E 7 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DG F 3 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 66 -154.43 -162.48 REMARK 500 ASN A 68 39.92 -148.04 REMARK 500 ALA A 306 -46.83 72.02 REMARK 500 PRO A 311 24.87 -71.82 REMARK 500 GLN A 401 -40.21 -130.66 REMARK 500 ASP A 402 89.66 -159.04 REMARK 500 GLN A 469 -158.03 -138.07 REMARK 500 ILE A 484 -62.05 -91.66 REMARK 500 ASN A 508 -115.18 64.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 704 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 240 OE1 REMARK 620 2 GLU A 240 OE2 47.6 REMARK 620 3 HOH A 897 O 78.8 124.5 REMARK 620 4 HOH A 913 O 77.5 123.9 3.4 REMARK 620 5 HOH A1209 O 81.8 127.8 3.5 4.5 REMARK 620 6 HOH A1220 O 80.8 125.9 2.7 6.0 3.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 703 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 470 OE2 REMARK 620 2 ASP A 528 OD2 165.4 REMARK 620 3 SER A 547 O 94.7 91.5 REMARK 620 4 SER A 547 OG 100.0 70.6 65.7 REMARK 620 5 HOH A 875 O 73.6 92.3 127.8 66.8 REMARK 620 6 HOH A1054 O 87.6 91.4 158.9 134.6 72.9 REMARK 620 7 HOH A1076 O 108.4 85.6 81.7 138.2 150.4 77.7 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9EZ5 RELATED DB: PDB REMARK 900 INACTIVATED VERSION DBREF 9EZ7 A 1 676 UNP Q8RLN4 Q8RLN4_GEOSE 1 676 DBREF 9EZ7 E 1 13 PDB 9EZ7 9EZ7 1 13 DBREF 9EZ7 F 1 13 PDB 9EZ7 9EZ7 1 13 SEQADV 9EZ7 VAL A 109 UNP Q8RLN4 GLU 109 ENGINEERED MUTATION SEQADV 9EZ7 A UNP Q8RLN4 CYS 488 DELETION SEQADV 9EZ7 A UNP Q8RLN4 PHE 489 DELETION SEQADV 9EZ7 A UNP Q8RLN4 SER 490 DELETION SEQADV 9EZ7 A UNP Q8RLN4 GLY 491 DELETION SEQADV 9EZ7 A UNP Q8RLN4 MET 492 DELETION SEQADV 9EZ7 A UNP Q8RLN4 CYS 493 DELETION SEQADV 9EZ7 A UNP Q8RLN4 GLY 582 DELETION SEQRES 1 A 669 MET ASN VAL PHE ARG ILE HIS GLY ASP ASN ILE ILE GLU SEQRES 2 A 669 CYS GLU ARG VAL ILE ASP LEU ILE LEU SER LYS ILE ASN SEQRES 3 A 669 PRO GLN LYS VAL LYS ARG GLY PHE ILE SER LEU SER CYS SEQRES 4 A 669 PRO PHE ILE GLU ILE ILE PHE LYS GLU GLY HIS ASP TYR SEQRES 5 A 669 PHE HIS TRP ARG PHE ASP MET PHE PRO GLY PHE ASN LYS SEQRES 6 A 669 ASN THR ASN ASP ARG TRP ASN SER ASN ILE LEU ASP LEU SEQRES 7 A 669 LEU SER GLN LYS GLY SER PHE LEU TYR GLU THR PRO ASP SEQRES 8 A 669 VAL ILE ILE THR SER LEU ASN ASN GLY LYS GLU GLU ILE SEQRES 9 A 669 LEU MET ALA ILE VAL PHE CYS SER ALA LEU GLN ALA GLY SEQRES 10 A 669 ASN GLN ALA TRP GLN ARG SER GLY ARG ALA TYR SER VAL SEQRES 11 A 669 GLY ARG THR GLY TYR PRO TYR ILE TYR ILE VAL ASP PHE SEQRES 12 A 669 VAL LYS TYR GLU LEU ASN ASN SER ASP ARG SER ARG LYS SEQRES 13 A 669 ASN LEU ARG PHE PRO ASN PRO ALA ILE PRO TYR SER TYR SEQRES 14 A 669 ILE SER HIS SER LYS ASN THR GLY ASN PHE ILE VAL GLN SEQRES 15 A 669 ALA TYR PHE ARG GLY GLU GLU TYR GLN PRO LYS TYR ASP SEQRES 16 A 669 LYS LYS LEU LYS PHE PHE ASP GLU THR ILE PHE ALA GLU SEQRES 17 A 669 ASP ASP ILE ALA ASP TYR ILE ILE ALA LYS LEU GLN HIS SEQRES 18 A 669 ARG ASP THR SER ASN ILE GLU GLN LEU LEU ILE ASN LYS SEQRES 19 A 669 ASN LEU LYS MET VAL GLU PHE LEU SER LYS ASN THR LYS SEQRES 20 A 669 ASN ASP ASN ASN PHE THR TYR SER GLU TRP GLU SER ILE SEQRES 21 A 669 TYR ASN GLY THR TYR ARG ILE THR ASN LEU PRO SER LEU SEQRES 22 A 669 GLY ARG PHE LYS PHE ARG LYS LYS ILE ALA GLU LYS SER SEQRES 23 A 669 LEU SER GLY LYS VAL LYS GLU PHE ASN ASN ILE VAL GLN SEQRES 24 A 669 ARG TYR SER VAL GLY LEU ALA SER SER ASP LEU PRO PHE SEQRES 25 A 669 GLY VAL ILE ARG LYS GLU SER ARG ASN ASP PHE ILE ASN SEQRES 26 A 669 ASP VAL CYS LYS LEU TYR ASN ILE ASN ASP MET LYS ILE SEQRES 27 A 669 ILE LYS GLU LEU LYS GLU ASP ALA ASP LEU ILE VAL CYS SEQRES 28 A 669 MET LEU LYS GLY PHE LYS PRO ARG GLY ASP ASP ASN ARG SEQRES 29 A 669 PRO ASP ARG GLY ALA LEU PRO LEU VAL ALA MET LEU ALA SEQRES 30 A 669 GLY GLU ASN ALA GLN ILE PHE THR PHE ILE TYR GLY PRO SEQRES 31 A 669 LEU ILE LYS GLY ALA ILE ASN LEU ILE ASP GLN ASP ILE SEQRES 32 A 669 ASN LYS LEU ALA LYS ARG ASN GLY LEU TRP LYS SER PHE SEQRES 33 A 669 VAL SER LEU SER ASP PHE ILE VAL LEU ASP CYS PRO ILE SEQRES 34 A 669 ILE GLY GLU SER TYR ASN GLU PHE ARG LEU ILE ILE ASN SEQRES 35 A 669 LYS ASN ASN LYS GLU SER ILE LEU ARG LYS THR SER LYS SEQRES 36 A 669 GLN GLN ASN ILE LEU VAL ASP PRO THR PRO ASN HIS TYR SEQRES 37 A 669 GLN GLU ASN ASP VAL ASP THR VAL ILE TYR SER ILE PHE SEQRES 38 A 669 LYS TYR ILE VAL PRO ASN ASN PRO PRO GLY GLY ASP TRP SEQRES 39 A 669 SER GLY LEU SER ILE ILE ARG ASN GLY HIS GLU PHE ARG SEQRES 40 A 669 TRP LEU SER LEU PRO ARG VAL SER GLU ASN GLY LYS ARG SEQRES 41 A 669 PRO ASP HIS VAL ILE GLN ILE LEU ASP LEU PHE GLU LYS SEQRES 42 A 669 PRO LEU LEU LEU SER ILE GLU SER LYS GLU LYS PRO ASN SEQRES 43 A 669 ASP LEU GLU PRO LYS ILE GLY VAL GLN LEU ILE LYS TYR SEQRES 44 A 669 ILE GLU TYR LEU PHE ASP PHE THR PRO SER VAL GLN ARG SEQRES 45 A 669 LYS ILE ALA GLY ASN TRP GLU PHE GLY ASN LYS SER LEU SEQRES 46 A 669 VAL PRO ASN ASP PHE ILE LEU LEU SER ALA GLY ALA PHE SEQRES 47 A 669 ILE ASP TYR ASP ASN LEU THR GLU ASN ASP TYR GLU LYS SEQRES 48 A 669 ILE PHE GLU VAL THR GLY CYS ASP LEU LEU ILE ALA ILE SEQRES 49 A 669 LYS ASN GLN ASN ASN PRO GLN LYS TRP VAL ILE LYS PHE SEQRES 50 A 669 LYS PRO LYS ASN THR ILE ALA GLU LYS LEU VAL ASN TYR SEQRES 51 A 669 ILE LYS LEU ASN PHE LYS SER ASN ILE PHE ASP THR GLY SEQRES 52 A 669 PHE PHE HIS ILE GLU GLY SEQRES 1 E 13 DG DT DC DT DG DC DA DT DT DC DC DT DC SEQRES 1 F 13 DG DA DG DG DA DA DT DG DC DA DG DA DC HET CL A 701 1 HET MES A 702 12 HET CA A 703 1 HET CA A 704 1 HETNAM CL CHLORIDE ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM CA CALCIUM ION FORMUL 4 CL CL 1- FORMUL 5 MES C6 H13 N O4 S FORMUL 6 CA 2(CA 2+) FORMUL 8 HOH *476(H2 O) HELIX 1 AA1 ASN A 10 ILE A 25 1 16 HELIX 2 AA2 LEU A 76 GLN A 81 1 6 HELIX 3 AA3 ALA A 116 TRP A 121 5 6 HELIX 4 AA4 ARG A 123 ARG A 132 1 10 HELIX 5 AA5 PRO A 163 GLY A 177 1 15 HELIX 6 AA6 ASP A 195 LYS A 199 5 5 HELIX 7 AA7 ASP A 202 PHE A 206 5 5 HELIX 8 AA8 ALA A 207 GLN A 220 1 14 HELIX 9 AA9 THR A 224 LYS A 244 1 21 HELIX 10 AB1 THR A 253 ASN A 262 1 10 HELIX 11 AB2 ALA A 283 LEU A 287 5 5 HELIX 12 AB3 LYS A 290 SER A 302 1 13 HELIX 13 AB4 ARG A 316 ASN A 332 1 17 HELIX 14 AB5 ASP A 335 LYS A 343 1 9 HELIX 15 AB6 ARG A 364 ARG A 367 5 4 HELIX 16 AB7 GLY A 368 GLY A 378 1 11 HELIX 17 AB8 ILE A 392 ASP A 400 1 9 HELIX 18 AB9 ASP A 402 ASN A 410 1 9 HELIX 19 AC1 ASN A 410 SER A 420 1 11 HELIX 20 AC2 ASN A 442 LYS A 452 1 11 HELIX 21 AC3 GLN A 469 ILE A 484 1 16 HELIX 22 AC4 LYS A 550 LEU A 554 5 5 HELIX 23 AC5 LYS A 557 ASP A 571 1 15 HELIX 24 AC6 VAL A 593 PHE A 597 5 5 HELIX 25 AC7 THR A 612 GLY A 624 1 13 HELIX 26 AC8 ASN A 648 ASN A 661 1 14 HELIX 27 AC9 ASP A 668 GLY A 670 5 3 SHEET 1 AA1 8 LYS A 29 PHE A 34 0 SHEET 2 AA1 8 PRO A 40 GLU A 48 -1 O GLU A 43 N LYS A 31 SHEET 3 AA1 8 ASP A 51 PRO A 61 -1 O TRP A 55 N ILE A 44 SHEET 4 AA1 8 ASN A 2 GLY A 8 1 N PHE A 4 O ARG A 56 SHEET 5 AA1 8 VAL A 92 ASN A 98 -1 O ILE A 93 N HIS A 7 SHEET 6 AA1 8 LYS A 101 CYS A 111 -1 O LEU A 105 N ILE A 94 SHEET 7 AA1 8 TYR A 137 PHE A 143 1 O ILE A 140 N VAL A 109 SHEET 8 AA1 8 ILE A 180 ARG A 186 1 O ALA A 183 N TYR A 139 SHEET 1 AA2 6 VAL A 303 GLY A 304 0 SHEET 2 AA2 6 PHE A 312 ILE A 315 -1 O VAL A 314 N VAL A 303 SHEET 3 AA2 6 LEU A 348 LEU A 353 -1 O LEU A 348 N ILE A 315 SHEET 4 AA2 6 GLN A 382 ILE A 387 1 O PHE A 384 N ILE A 349 SHEET 5 AA2 6 PHE A 422 CYS A 427 1 O VAL A 424 N THR A 385 SHEET 6 AA2 6 GLU A 436 ILE A 441 -1 O ILE A 440 N ILE A 423 SHEET 1 AA3 5 GLY A 498 ASP A 499 0 SHEET 2 AA3 5 GLY A 502 ARG A 507 -1 O GLY A 502 N ASP A 499 SHEET 3 AA3 5 HIS A 510 TRP A 514 -1 O PHE A 512 N ILE A 505 SHEET 4 AA3 5 VAL A 576 LYS A 579 -1 O VAL A 576 N ARG A 513 SHEET 5 AA3 5 GLU A 586 PHE A 587 -1 O GLU A 586 N GLN A 577 SHEET 1 AA4 6 HIS A 529 ILE A 533 0 SHEET 2 AA4 6 LEU A 541 SER A 547 -1 O LEU A 543 N ILE A 531 SHEET 3 AA4 6 ILE A 598 ILE A 606 1 O ILE A 598 N LEU A 542 SHEET 4 AA4 6 LEU A 627 GLN A 634 1 O ILE A 631 N PHE A 605 SHEET 5 AA4 6 LYS A 639 PRO A 646 -1 O VAL A 641 N LYS A 632 SHEET 6 AA4 6 PHE A 672 GLY A 676 1 O GLY A 676 N PHE A 644 LINK OE1 GLU A 240 CA CA A 704 1555 2555 2.79 LINK OE2 GLU A 240 CA CA A 704 1555 2555 2.65 LINK OE2 GLU A 470 CA CA A 703 1555 1555 2.38 LINK OD2 ASP A 528 CA CA A 703 1555 1555 2.51 LINK O SER A 547 CA CA A 703 1555 1555 2.44 LINK OG SER A 547 CA CA A 703 1555 1555 2.95 LINK CA CA A 703 O HOH A 875 1555 1555 2.36 LINK CA CA A 703 O HOH A1054 1555 1555 2.42 LINK CA CA A 703 O HOH A1076 1555 1555 2.21 LINK CA CA A 704 O HOH A 897 1555 1555 2.97 LINK CA CA A 704 O HOH A 913 1555 1555 2.97 LINK CA CA A 704 O HOH A1209 1555 1555 2.37 LINK CA CA A 704 O HOH A1220 1555 1555 2.60 CISPEP 1 PHE A 143 VAL A 144 0 2.73 CISPEP 2 ASN A 636 PRO A 637 0 -4.76 CRYST1 98.550 132.989 63.285 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010147 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007519 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015802 0.00000 CONECT 3800 5961 CONECT 4220 5961 CONECT 4366 5961 CONECT 4368 5961 CONECT 5949 5950 5954 CONECT 5950 5949 5951 CONECT 5951 5950 5952 CONECT 5952 5951 5953 5955 CONECT 5953 5952 5954 CONECT 5954 5949 5953 CONECT 5955 5952 5956 CONECT 5956 5955 5957 CONECT 5957 5956 5958 5959 5960 CONECT 5958 5957 CONECT 5959 5957 CONECT 5960 5957 CONECT 5961 3800 4220 4366 4368 CONECT 5961 6037 6216 6238 CONECT 5962 6059 6075 6371 6382 CONECT 6037 5961 CONECT 6059 5962 CONECT 6075 5962 CONECT 6216 5961 CONECT 6238 5961 CONECT 6371 5962 CONECT 6382 5962 MASTER 337 0 4 27 25 0 0 6 6435 3 26 54 END