HEADER VIRAL PROTEIN 29-APR-24 9F5L TITLE SARS-COV-2 NUCLEOCAPSID N-TERMINAL DOMAIN (NTD) MUTANT A119S COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: N,NUCLEOCAPSID PROTEIN,NC,PROTEIN N; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS SARS-COV-2, NUCELOCAPSID, N-TERMINAL DOMAIN, ZETA P. 2, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.DHAMOTHARAN,A.SCHLUNDT REVDAT 1 20-NOV-24 9F5L 0 JRNL AUTH K.DHAMOTHARAN,A.SCHLUNDT JRNL TITL STRUCTURE OF N-TERMINAL DOMAIN MUTANT A119S OF NUCLEOCAPSID JRNL TITL 2 PROTEIN OF SARS-COV-2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 22492 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.314 REMARK 3 R VALUE (WORKING SET) : 0.314 REMARK 3 FREE R VALUE : 0.323 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1179 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.4067 REMARK 3 BIN FREE R VALUE : 0.3544 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 27 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3848 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.45470 REMARK 3 B22 (A**2) : -8.78780 REMARK 3 B33 (A**2) : -0.66690 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.490 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.609 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.322 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.584 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.323 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.827 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.825 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3960 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5385 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1313 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 678 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3960 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 503 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2519 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 0.77 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.58 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.60 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|48 - A|171 } REMARK 3 ORIGIN FOR THE GROUP (A): 10.9835 -16.818 -21.2052 REMARK 3 T TENSOR REMARK 3 T11: 0.1784 T22: 0.1308 REMARK 3 T33: 0.1255 T12: -0.0065 REMARK 3 T13: -0.0608 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 2.1847 L22: 7.1449 REMARK 3 L33: 1.3608 L12: -1.4548 REMARK 3 L13: 0.7153 L23: 0.3403 REMARK 3 S TENSOR REMARK 3 S11: 0.1686 S12: 0.4161 S13: 0.3165 REMARK 3 S21: 0.4161 S22: 0.1299 S23: -0.0691 REMARK 3 S31: 0.3165 S32: -0.0691 S33: -0.2985 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|48 - B|171 } REMARK 3 ORIGIN FOR THE GROUP (A): 36.3221 -32.775 -32.3025 REMARK 3 T TENSOR REMARK 3 T11: 0.1439 T22: 0.048 REMARK 3 T33: 0.1358 T12: 0.0256 REMARK 3 T13: 0.0429 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 2.9842 L22: 2.75 REMARK 3 L33: 3.9585 L12: -0.7458 REMARK 3 L13: 0.7375 L23: -0.6176 REMARK 3 S TENSOR REMARK 3 S11: -0.0837 S12: 0.1225 S13: -0.2099 REMARK 3 S21: 0.1225 S22: 0.0637 S23: -0.116 REMARK 3 S31: -0.2099 S32: -0.116 S33: 0.0199 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|48 - C|171 } REMARK 3 ORIGIN FOR THE GROUP (A): 10.2301 -41.1795 -36.6071 REMARK 3 T TENSOR REMARK 3 T11: 0.1039 T22: 0.2142 REMARK 3 T33: 0.1965 T12: 0.0342 REMARK 3 T13: -0.0373 T23: -0.1372 REMARK 3 L TENSOR REMARK 3 L11: 5.5234 L22: 3.4625 REMARK 3 L33: 2.4163 L12: 0.0797 REMARK 3 L13: -1.1805 L23: -0.3852 REMARK 3 S TENSOR REMARK 3 S11: 0.0625 S12: -0.1284 S13: -0.1226 REMARK 3 S21: -0.1284 S22: -0.0865 S23: -0.2282 REMARK 3 S31: -0.1226 S32: -0.2282 S33: 0.024 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|49 - D|171 } REMARK 3 ORIGIN FOR THE GROUP (A): -5.907 -44.2743 -8.1162 REMARK 3 T TENSOR REMARK 3 T11: 0.7085 T22: 0.0499 REMARK 3 T33: 0.1443 T12: 0.0571 REMARK 3 T13: 0.2594 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 1.8781 L22: 3.1603 REMARK 3 L33: 3.7674 L12: -0.6014 REMARK 3 L13: 0.933 L23: -1.2271 REMARK 3 S TENSOR REMARK 3 S11: -0.111 S12: 1.1053 S13: -0.3786 REMARK 3 S21: 1.1053 S22: 0.1402 S23: 0.0011 REMARK 3 S31: -0.3786 S32: 0.0011 S33: -0.0292 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9F5L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-APR-24. REMARK 100 THE DEPOSITION ID IS D_1292138208. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97598 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC 1.1.7, XDS BUILT REMARK 200 20230630 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.13, POINTLESS REMARK 200 1.12.15, STARANISO 2.3.74 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22537 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.363 REMARK 200 RESOLUTION RANGE LOW (A) : 99.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200MM SODIUM ACETATE TRIHYDRATE 100MM REMARK 280 TRIS-HCL PH 8.5 30% PEG 4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.43550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.58300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.10150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.58300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.43550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.10150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 39 REMARK 465 SER A 40 REMARK 465 ARG A 41 REMARK 465 PRO A 42 REMARK 465 GLN A 43 REMARK 465 GLY A 44 REMARK 465 LEU A 45 REMARK 465 PRO A 46 REMARK 465 ASN A 47 REMARK 465 TYR A 172 REMARK 465 ALA A 173 REMARK 465 GLU A 174 REMARK 465 GLY B 39 REMARK 465 SER B 40 REMARK 465 ARG B 41 REMARK 465 PRO B 42 REMARK 465 GLN B 43 REMARK 465 GLY B 44 REMARK 465 LEU B 45 REMARK 465 PRO B 46 REMARK 465 ASN B 47 REMARK 465 TYR B 172 REMARK 465 ALA B 173 REMARK 465 GLU B 174 REMARK 465 GLY C 39 REMARK 465 SER C 40 REMARK 465 ARG C 41 REMARK 465 PRO C 42 REMARK 465 GLN C 43 REMARK 465 GLY C 44 REMARK 465 LEU C 45 REMARK 465 PRO C 46 REMARK 465 ASN C 47 REMARK 465 TYR C 172 REMARK 465 ALA C 173 REMARK 465 GLU C 174 REMARK 465 GLY D 39 REMARK 465 SER D 40 REMARK 465 ARG D 41 REMARK 465 PRO D 42 REMARK 465 GLN D 43 REMARK 465 GLY D 44 REMARK 465 LEU D 45 REMARK 465 PRO D 46 REMARK 465 ASN D 47 REMARK 465 ASN D 48 REMARK 465 TYR D 172 REMARK 465 ALA D 173 REMARK 465 GLU D 174 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 143 45.01 -106.63 REMARK 500 LYS B 143 45.40 -106.59 REMARK 500 LYS C 143 44.76 -106.28 REMARK 500 GLU D 136 -58.64 -25.07 REMARK 500 LYS D 143 45.04 -106.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 239 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH D 240 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH D 241 DISTANCE = 9.91 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9EXB RELATED DB: PDB REMARK 900 NTD_WT REMARK 900 RELATED ID: 9F83 RELATED DB: PDB REMARK 900 NTD_D63G REMARK 900 RELATED ID: 9EZB RELATED DB: PDB REMARK 900 NTD_P67S REMARK 900 RELATED ID: 9F7A RELATED DB: PDB REMARK 900 NTD_P80R REMARK 900 RELATED ID: 9EVY RELATED DB: PDB REMARK 900 NTD_E136D REMARK 900 RELATED ID: 9FBG RELATED DB: PDB REMARK 900 NTD_P151S REMARK 900 RELATED ID: 9F5J RELATED DB: PDB REMARK 900 NTD_Q58I REMARK 900 RELATED ID: 9F7C RELATED DB: PDB REMARK 900 NTD_S105I REMARK 900 RELATED ID: 9EWH RELATED DB: PDB REMARK 900 NTD_Y109A DBREF 9F5L A 41 174 UNP P0DTC9 NCAP_SARS2 41 174 DBREF 9F5L B 41 174 UNP P0DTC9 NCAP_SARS2 41 174 DBREF 9F5L C 41 174 UNP P0DTC9 NCAP_SARS2 41 174 DBREF 9F5L D 41 174 UNP P0DTC9 NCAP_SARS2 41 174 SEQADV 9F5L GLY A 39 UNP P0DTC9 EXPRESSION TAG SEQADV 9F5L SER A 40 UNP P0DTC9 EXPRESSION TAG SEQADV 9F5L SER A 119 UNP P0DTC9 ALA 119 VARIANT SEQADV 9F5L GLY B 39 UNP P0DTC9 EXPRESSION TAG SEQADV 9F5L SER B 40 UNP P0DTC9 EXPRESSION TAG SEQADV 9F5L SER B 119 UNP P0DTC9 ALA 119 VARIANT SEQADV 9F5L GLY C 39 UNP P0DTC9 EXPRESSION TAG SEQADV 9F5L SER C 40 UNP P0DTC9 EXPRESSION TAG SEQADV 9F5L SER C 119 UNP P0DTC9 ALA 119 VARIANT SEQADV 9F5L GLY D 39 UNP P0DTC9 EXPRESSION TAG SEQADV 9F5L SER D 40 UNP P0DTC9 EXPRESSION TAG SEQADV 9F5L SER D 119 UNP P0DTC9 ALA 119 VARIANT SEQRES 1 A 136 GLY SER ARG PRO GLN GLY LEU PRO ASN ASN THR ALA SER SEQRES 2 A 136 TRP PHE THR ALA LEU THR GLN HIS GLY LYS GLU ASP LEU SEQRES 3 A 136 LYS PHE PRO ARG GLY GLN GLY VAL PRO ILE ASN THR ASN SEQRES 4 A 136 SER SER PRO ASP ASP GLN ILE GLY TYR TYR ARG ARG ALA SEQRES 5 A 136 THR ARG ARG ILE ARG GLY GLY ASP GLY LYS MET LYS ASP SEQRES 6 A 136 LEU SER PRO ARG TRP TYR PHE TYR TYR LEU GLY THR GLY SEQRES 7 A 136 PRO GLU SER GLY LEU PRO TYR GLY ALA ASN LYS ASP GLY SEQRES 8 A 136 ILE ILE TRP VAL ALA THR GLU GLY ALA LEU ASN THR PRO SEQRES 9 A 136 LYS ASP HIS ILE GLY THR ARG ASN PRO ALA ASN ASN ALA SEQRES 10 A 136 ALA ILE VAL LEU GLN LEU PRO GLN GLY THR THR LEU PRO SEQRES 11 A 136 LYS GLY PHE TYR ALA GLU SEQRES 1 B 136 GLY SER ARG PRO GLN GLY LEU PRO ASN ASN THR ALA SER SEQRES 2 B 136 TRP PHE THR ALA LEU THR GLN HIS GLY LYS GLU ASP LEU SEQRES 3 B 136 LYS PHE PRO ARG GLY GLN GLY VAL PRO ILE ASN THR ASN SEQRES 4 B 136 SER SER PRO ASP ASP GLN ILE GLY TYR TYR ARG ARG ALA SEQRES 5 B 136 THR ARG ARG ILE ARG GLY GLY ASP GLY LYS MET LYS ASP SEQRES 6 B 136 LEU SER PRO ARG TRP TYR PHE TYR TYR LEU GLY THR GLY SEQRES 7 B 136 PRO GLU SER GLY LEU PRO TYR GLY ALA ASN LYS ASP GLY SEQRES 8 B 136 ILE ILE TRP VAL ALA THR GLU GLY ALA LEU ASN THR PRO SEQRES 9 B 136 LYS ASP HIS ILE GLY THR ARG ASN PRO ALA ASN ASN ALA SEQRES 10 B 136 ALA ILE VAL LEU GLN LEU PRO GLN GLY THR THR LEU PRO SEQRES 11 B 136 LYS GLY PHE TYR ALA GLU SEQRES 1 C 136 GLY SER ARG PRO GLN GLY LEU PRO ASN ASN THR ALA SER SEQRES 2 C 136 TRP PHE THR ALA LEU THR GLN HIS GLY LYS GLU ASP LEU SEQRES 3 C 136 LYS PHE PRO ARG GLY GLN GLY VAL PRO ILE ASN THR ASN SEQRES 4 C 136 SER SER PRO ASP ASP GLN ILE GLY TYR TYR ARG ARG ALA SEQRES 5 C 136 THR ARG ARG ILE ARG GLY GLY ASP GLY LYS MET LYS ASP SEQRES 6 C 136 LEU SER PRO ARG TRP TYR PHE TYR TYR LEU GLY THR GLY SEQRES 7 C 136 PRO GLU SER GLY LEU PRO TYR GLY ALA ASN LYS ASP GLY SEQRES 8 C 136 ILE ILE TRP VAL ALA THR GLU GLY ALA LEU ASN THR PRO SEQRES 9 C 136 LYS ASP HIS ILE GLY THR ARG ASN PRO ALA ASN ASN ALA SEQRES 10 C 136 ALA ILE VAL LEU GLN LEU PRO GLN GLY THR THR LEU PRO SEQRES 11 C 136 LYS GLY PHE TYR ALA GLU SEQRES 1 D 136 GLY SER ARG PRO GLN GLY LEU PRO ASN ASN THR ALA SER SEQRES 2 D 136 TRP PHE THR ALA LEU THR GLN HIS GLY LYS GLU ASP LEU SEQRES 3 D 136 LYS PHE PRO ARG GLY GLN GLY VAL PRO ILE ASN THR ASN SEQRES 4 D 136 SER SER PRO ASP ASP GLN ILE GLY TYR TYR ARG ARG ALA SEQRES 5 D 136 THR ARG ARG ILE ARG GLY GLY ASP GLY LYS MET LYS ASP SEQRES 6 D 136 LEU SER PRO ARG TRP TYR PHE TYR TYR LEU GLY THR GLY SEQRES 7 D 136 PRO GLU SER GLY LEU PRO TYR GLY ALA ASN LYS ASP GLY SEQRES 8 D 136 ILE ILE TRP VAL ALA THR GLU GLY ALA LEU ASN THR PRO SEQRES 9 D 136 LYS ASP HIS ILE GLY THR ARG ASN PRO ALA ASN ASN ALA SEQRES 10 D 136 ALA ILE VAL LEU GLN LEU PRO GLN GLY THR THR LEU PRO SEQRES 11 D 136 LYS GLY PHE TYR ALA GLU FORMUL 5 HOH *150(H2 O) HELIX 1 AA1 SER A 79 ASP A 82 5 4 HELIX 2 AA2 THR A 115 SER A 119 5 5 HELIX 3 AA3 SER B 79 ASP B 82 5 4 HELIX 4 AA4 THR B 115 SER B 119 5 5 HELIX 5 AA5 SER C 79 ASP C 82 5 4 HELIX 6 AA6 THR C 115 SER C 119 5 5 HELIX 7 AA7 SER D 79 ASP D 82 5 4 HELIX 8 AA8 THR D 115 SER D 119 5 5 SHEET 1 AA1 4 LEU A 56 THR A 57 0 SHEET 2 AA1 4 ARG A 107 TYR A 112 -1 O TRP A 108 N LEU A 56 SHEET 3 AA1 4 ILE A 84 ALA A 90 -1 N TYR A 86 O TYR A 111 SHEET 4 AA1 4 ILE A 130 ALA A 134 -1 O VAL A 133 N GLY A 85 SHEET 1 AA2 2 ARG A 93 ARG A 95 0 SHEET 2 AA2 2 MET A 101 ASP A 103 -1 O LYS A 102 N ILE A 94 SHEET 1 AA3 3 LEU A 167 PRO A 168 0 SHEET 2 AA3 3 ARG C 92 ARG C 95 -1 O ARG C 93 N LEU A 167 SHEET 3 AA3 3 MET C 101 ASP C 103 -1 O LYS C 102 N ILE C 94 SHEET 1 AA4 4 LEU B 56 THR B 57 0 SHEET 2 AA4 4 ARG B 107 TYR B 112 -1 O TRP B 108 N LEU B 56 SHEET 3 AA4 4 ILE B 84 ALA B 90 -1 N TYR B 86 O TYR B 111 SHEET 4 AA4 4 ILE B 130 ALA B 134 -1 O VAL B 133 N GLY B 85 SHEET 1 AA5 2 ARG B 93 ARG B 95 0 SHEET 2 AA5 2 MET B 101 ASP B 103 -1 O LYS B 102 N ILE B 94 SHEET 1 AA6 4 LEU C 56 THR C 57 0 SHEET 2 AA6 4 ARG C 107 TYR C 112 -1 O TRP C 108 N LEU C 56 SHEET 3 AA6 4 ILE C 84 ALA C 90 -1 N TYR C 86 O TYR C 111 SHEET 4 AA6 4 ILE C 130 ALA C 134 -1 O VAL C 133 N GLY C 85 SHEET 1 AA7 4 LEU D 56 THR D 57 0 SHEET 2 AA7 4 ARG D 107 TYR D 112 -1 O TRP D 108 N LEU D 56 SHEET 3 AA7 4 ILE D 84 ALA D 90 -1 N TYR D 86 O TYR D 111 SHEET 4 AA7 4 ILE D 130 ALA D 134 -1 O VAL D 133 N GLY D 85 SHEET 1 AA8 2 ARG D 93 ARG D 95 0 SHEET 2 AA8 2 MET D 101 ASP D 103 -1 O LYS D 102 N ILE D 94 CRYST1 58.871 92.203 99.166 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016986 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010846 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010084 0.00000