HEADER PROTON TRANSPORT 07-MAY-24 9F9E TITLE LASER EXCITATION EFFECTS ON BR: EXTRAPOLATED 6 PS LIGHT DATASET TITLE 2 RECORDED AT 342 GW/CM2 AT SWISSFEL COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIORHODOPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BR,BACTERIOOPSIN,BO; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM; SOURCE 3 ORGANISM_TAXID: 2242; SOURCE 4 ATCC: 700922; SOURCE 5 GENE: BOP, VNG_1467G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACTERIORHODOSPIN, PROTON TRANSPORT, MEMBRANE, RETINAL, TIME-RESOLVED KEYWDS 2 CRYSTALLOGRAPHY, SERIAL CRYSTALLOGRAPHY, LASER EXCITATION EXPDTA X-RAY DIFFRACTION AUTHOR Q.BERTRAND,T.WEINERT,J.STANDFUSS REVDAT 1 22-JAN-25 9F9E 0 JRNL AUTH Q.BERTRAND,P.NOGLY,E.NANGO,D.KEKILLI,G.KHUSAINOV,A.FURRER, JRNL AUTH 2 D.JAMES,F.DWORKOWSKI,P.SKOPINTSEV,S.MOUS,I.MARTIEL, JRNL AUTH 3 P.BORJESSON,G.ORTOLANI,C.Y.HUANG,M.KEPA,D.OZEROV,S.BRUNLE, JRNL AUTH 4 V.PANNEELS,T.TANAKA,R.TANAKA,K.TONO,S.OWADA,P.J.M.JOHNSON, JRNL AUTH 5 K.NASS,G.KNOPP,C.CIRELLI,C.MILNE,G.SCHERTLER,S.IWATA, JRNL AUTH 6 R.NEUTZE,T.WEINERT,J.STANDFUSS JRNL TITL STRUCTURAL EFFECTS OF HIGH LASER POWER DENSITIES ON AN EARLY JRNL TITL 2 BACTERIORHODOPSIN PHOTOCYCLE INTERMEDIATE. JRNL REF NAT COMMUN V. 15 10278 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39604356 JRNL DOI 10.1038/S41467-024-54422-8 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20_4459: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 22755 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.259 REMARK 3 R VALUE (WORKING SET) : 0.255 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.890 REMARK 3 FREE R VALUE TEST SET COUNT : 2024 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 15.7400 - 4.3100 0.99 1532 142 0.2669 0.3377 REMARK 3 2 4.3000 - 3.4300 0.99 1503 149 0.2272 0.2644 REMARK 3 3 3.4300 - 3.0000 0.99 1486 146 0.2368 0.2834 REMARK 3 4 3.0000 - 2.7300 0.99 1487 145 0.2158 0.2501 REMARK 3 5 2.7300 - 2.5400 0.99 1509 147 0.2171 0.2548 REMARK 3 6 2.5300 - 2.3900 0.98 1485 146 0.2069 0.2647 REMARK 3 7 2.3900 - 2.2700 0.99 1492 151 0.2064 0.2674 REMARK 3 8 2.2700 - 2.1700 0.99 1469 145 0.2208 0.3232 REMARK 3 9 2.1700 - 2.0900 0.99 1494 148 0.2392 0.2980 REMARK 3 10 2.0800 - 2.0100 0.99 1507 144 0.2712 0.3159 REMARK 3 11 2.0100 - 1.9500 0.97 1450 137 0.3164 0.3475 REMARK 3 12 1.9500 - 1.9000 0.97 1448 144 0.3584 0.3678 REMARK 3 13 1.8900 - 1.8400 0.96 1453 139 0.4413 0.5046 REMARK 3 14 1.8400 - 1.8000 0.95 1416 141 0.4772 0.4521 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2072 REMARK 3 ANGLE : 0.883 2763 REMARK 3 CHIRALITY : 0.035 307 REMARK 3 PLANARITY : 0.011 326 REMARK 3 DIHEDRAL : 18.660 420 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7751 27.2130 30.4112 REMARK 3 T TENSOR REMARK 3 T11: 0.0679 T22: 0.0690 REMARK 3 T33: 0.2256 T12: 0.0331 REMARK 3 T13: -0.0436 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.7763 L22: 0.6136 REMARK 3 L33: 0.4816 L12: 0.1635 REMARK 3 L13: 0.3249 L23: 0.1705 REMARK 3 S TENSOR REMARK 3 S11: -0.0315 S12: 0.1050 S13: -0.2994 REMARK 3 S21: 0.0566 S22: 0.1763 S23: -0.3265 REMARK 3 S31: 0.1403 S32: 0.2380 S33: 0.5146 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3404 27.9322 41.2361 REMARK 3 T TENSOR REMARK 3 T11: 0.0905 T22: 0.0280 REMARK 3 T33: 0.1408 T12: 0.0678 REMARK 3 T13: -0.0539 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 1.2416 L22: 1.2578 REMARK 3 L33: 0.3044 L12: 0.4984 REMARK 3 L13: -0.3075 L23: 0.2136 REMARK 3 S TENSOR REMARK 3 S11: 0.1938 S12: -0.4502 S13: -0.1229 REMARK 3 S21: 0.4490 S22: -0.1493 S23: -0.1521 REMARK 3 S31: 0.1943 S32: 0.1403 S33: 0.1142 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8645 39.1070 28.6820 REMARK 3 T TENSOR REMARK 3 T11: 0.1037 T22: 0.0901 REMARK 3 T33: 0.0667 T12: 0.0344 REMARK 3 T13: -0.0209 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.2683 L22: 0.6023 REMARK 3 L33: 0.1143 L12: 0.0019 REMARK 3 L13: -0.1657 L23: -0.0381 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: 0.0395 S13: -0.0029 REMARK 3 S21: -0.0606 S22: 0.0639 S23: -0.1058 REMARK 3 S31: -0.0071 S32: -0.2719 S33: -0.0353 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3793 45.9701 39.7926 REMARK 3 T TENSOR REMARK 3 T11: 0.1174 T22: 0.1022 REMARK 3 T33: 0.0931 T12: 0.0284 REMARK 3 T13: -0.0160 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.0317 L22: 0.1642 REMARK 3 L33: 0.0261 L12: 0.0033 REMARK 3 L13: -0.0314 L23: -0.0046 REMARK 3 S TENSOR REMARK 3 S11: 0.0677 S12: -0.0834 S13: 0.0083 REMARK 3 S21: 0.0614 S22: 0.1132 S23: 0.0218 REMARK 3 S31: 0.1427 S32: 0.0608 S33: 0.0084 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4388 53.2151 30.2793 REMARK 3 T TENSOR REMARK 3 T11: 0.1042 T22: 0.0881 REMARK 3 T33: 0.1407 T12: -0.0036 REMARK 3 T13: -0.0136 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.3559 L22: 0.1535 REMARK 3 L33: 1.0239 L12: -0.1613 REMARK 3 L13: -0.0552 L23: 0.0115 REMARK 3 S TENSOR REMARK 3 S11: 0.1862 S12: 0.0570 S13: 0.1739 REMARK 3 S21: 0.0635 S22: 0.0834 S23: -0.1969 REMARK 3 S31: 0.0595 S32: 0.1957 S33: 0.4067 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8035 48.1139 57.4340 REMARK 3 T TENSOR REMARK 3 T11: 0.5758 T22: 0.5671 REMARK 3 T33: 0.3715 T12: -0.1313 REMARK 3 T13: -0.0035 T23: 0.1376 REMARK 3 L TENSOR REMARK 3 L11: -0.0029 L22: 0.0006 REMARK 3 L33: 0.0147 L12: 0.0010 REMARK 3 L13: -0.0011 L23: 0.0070 REMARK 3 S TENSOR REMARK 3 S11: 0.1479 S12: -0.1177 S13: 0.0737 REMARK 3 S21: 0.0485 S22: 0.0690 S23: -0.1355 REMARK 3 S31: 0.0434 S32: 0.0414 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1142 42.2695 35.4275 REMARK 3 T TENSOR REMARK 3 T11: 0.0885 T22: 0.1129 REMARK 3 T33: 0.1153 T12: -0.0252 REMARK 3 T13: -0.0687 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.3678 L22: 1.0132 REMARK 3 L33: 0.7121 L12: -0.2645 REMARK 3 L13: -0.0130 L23: -0.2991 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: -0.1646 S13: 0.1255 REMARK 3 S21: 0.3106 S22: -0.0040 S23: -0.5715 REMARK 3 S31: -0.2809 S32: 0.2626 S33: 0.1593 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2204 31.7624 54.8188 REMARK 3 T TENSOR REMARK 3 T11: 0.4499 T22: 0.5148 REMARK 3 T33: 0.2646 T12: -0.0053 REMARK 3 T13: -0.1856 T23: 0.0454 REMARK 3 L TENSOR REMARK 3 L11: 0.0516 L22: 0.0690 REMARK 3 L33: 0.0673 L12: -0.0368 REMARK 3 L13: -0.0470 L23: 0.0015 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: 0.0282 S13: -0.0125 REMARK 3 S21: 0.0777 S22: 0.0671 S23: -0.0467 REMARK 3 S31: 0.0378 S32: 0.1117 S33: -0.0043 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1688 30.3482 64.8308 REMARK 3 T TENSOR REMARK 3 T11: 0.5246 T22: 0.2504 REMARK 3 T33: 0.2374 T12: -0.0183 REMARK 3 T13: -0.0250 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 0.0045 L22: 0.0001 REMARK 3 L33: 0.0150 L12: -0.0058 REMARK 3 L13: 0.0007 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.1147 S12: -0.0408 S13: 0.0475 REMARK 3 S21: 0.0743 S22: -0.0111 S23: 0.0741 REMARK 3 S31: -0.0908 S32: 0.1099 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9F9E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1292138400. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : ESA REMARK 200 X-RAY GENERATOR MODEL : SWISSFEL ARAMIS BEAMLINE ESA REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.028919 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI JUNGFRAU 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL 0.9.1 REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL 0.9.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27072 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 16.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 224.0 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 146.0 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NA/K PHOSPHATE BUFFER PH 5.6 30 REMARK 280 % PEG 2000, LIPIDIC CUBIC PHASE, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.85000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.85000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.85000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 SER A 158 OG REMARK 470 LYS A 172 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 458 O HOH A 465 2.05 REMARK 500 OD1 ASP A 102 O HOH A 401 2.10 REMARK 500 O GLY A 197 O HOH A 402 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 154 48.46 -98.57 REMARK 500 MET A 163 -166.97 -109.69 REMARK 500 MET A 163 -166.97 -110.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 465 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH A 466 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH A 467 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH A 468 DISTANCE = 7.64 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LI1 A 301 REMARK 610 LI1 A 302 REMARK 610 LI1 A 303 REMARK 610 LI1 A 304 REMARK 610 LI1 A 305 REMARK 610 LI1 A 306 REMARK 610 LI1 A 311 REMARK 610 LI1 A 312 REMARK 610 LI1 A 313 REMARK 610 LI1 A 314 REMARK 610 LI1 A 315 DBREF 9F9E A 5 234 UNP P02945 BACR_HALSA 18 247 SEQRES 1 A 230 THR GLY ARG PRO GLU TRP ILE TRP LEU ALA LEU GLY THR SEQRES 2 A 230 ALA LEU MET GLY LEU GLY THR LEU TYR PHE LEU VAL LYS SEQRES 3 A 230 GLY MET GLY VAL SER ASP PRO ASP ALA LYS LYS PHE TYR SEQRES 4 A 230 ALA ILE THR THR LEU VAL PRO ALA ILE ALA PHE THR MET SEQRES 5 A 230 TYR LEU SER MET LEU LEU GLY TYR GLY LEU THR MET VAL SEQRES 6 A 230 PRO PHE GLY GLY GLU GLN ASN PRO ILE TYR TRP ALA ARG SEQRES 7 A 230 TYR ALA ASP TRP LEU PHE THR THR PRO LEU LEU LEU LEU SEQRES 8 A 230 ASP LEU ALA LEU LEU VAL ASP ALA ASP GLN GLY THR ILE SEQRES 9 A 230 LEU ALA LEU VAL GLY ALA ASP GLY ILE MET ILE GLY THR SEQRES 10 A 230 GLY LEU VAL GLY ALA LEU THR LYS VAL TYR SER TYR ARG SEQRES 11 A 230 PHE VAL TRP TRP ALA ILE SER THR ALA ALA MET LEU TYR SEQRES 12 A 230 ILE LEU TYR VAL LEU PHE PHE GLY PHE THR SER LYS ALA SEQRES 13 A 230 GLU SER MET ARG PRO GLU VAL ALA SER THR PHE LYS VAL SEQRES 14 A 230 LEU ARG ASN VAL THR VAL VAL LEU TRP SER ALA TYR PRO SEQRES 15 A 230 VAL VAL TRP LEU ILE GLY SER GLU GLY ALA GLY ILE VAL SEQRES 16 A 230 PRO LEU ASN ILE GLU THR LEU LEU PHE MET VAL LEU ASP SEQRES 17 A 230 VAL SER ALA LYS VAL GLY PHE GLY LEU ILE LEU LEU ARG SEQRES 18 A 230 SER ARG ALA ILE PHE GLY GLU ALA GLU HET LI1 A 301 14 HET LI1 A 302 43 HET LI1 A 303 20 HET LI1 A 304 32 HET LI1 A 305 36 HET LI1 A 306 38 HET OLC A 307 65 HET OLC A 308 65 HET OLC A 309 65 HET OLC A 310 65 HET LI1 A 311 36 HET LI1 A 312 32 HET LI1 A 313 20 HET LI1 A 314 20 HET LI1 A 315 14 HET RET A 316 48 HETNAM LI1 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14- HETNAM 2 LI1 TRIMETHYLHEXADECAN-16-YL]GLYCEROL HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM RET RETINAL HETSYN LI1 LIPID FRAGMENT HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 LI1 11(C42 H86 O3) FORMUL 8 OLC 4(C21 H40 O4) FORMUL 17 RET C20 H28 O FORMUL 18 HOH *68(H2 O) HELIX 1 AA1 GLU A 9 GLY A 31 1 23 HELIX 2 AA2 ASP A 36 LEU A 62 1 27 HELIX 3 AA3 TRP A 80 VAL A 101 1 22 HELIX 4 AA4 ASP A 104 THR A 128 1 25 HELIX 5 AA5 VAL A 130 PHE A 154 1 25 HELIX 6 AA6 GLY A 155 GLU A 161 1 7 HELIX 7 AA7 ARG A 164 GLY A 192 1 29 HELIX 8 AA8 PRO A 200 ARG A 225 1 26 HELIX 9 AA9 SER A 226 PHE A 230 5 5 SHEET 1 AA1 2 LEU A 66 PRO A 70 0 SHEET 2 AA1 2 GLN A 75 TYR A 79 -1 O ILE A 78 N THR A 67 LINK NZ LYS A 216 C15 RET A 316 1555 1555 1.34 CRYST1 62.950 62.950 111.700 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015886 0.009172 0.000000 0.00000 SCALE2 0.000000 0.018343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008953 0.00000