HEADER PROTON TRANSPORT 07-MAY-24 9F9H TITLE LASER EXCITATION EFFECTS ON BR: REPROCESSED EXTRAPOLATED 10PS LIGHT TITLE 2 DATASET RECORDED AT 525 GW/CM2 FROM NOGLY ET AL. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIORHODOPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BR,BACTERIOOPSIN,BO; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM; SOURCE 3 ORGANISM_TAXID: 2242; SOURCE 4 ATCC: 700922; SOURCE 5 GENE: BOP, VNG_1467G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACTERIORHODOSPIN, PROTON TRANSPORT, MEMBRANE, RETINAL, TIME-RESOLVED KEYWDS 2 CRYSTALLOGRAPHY, SERIAL CRYSTALLOGRAPHY, LASER EXCITATION EXPDTA X-RAY DIFFRACTION AUTHOR Q.BERTRAND,T.WEINERT,J.STANDFUSS REVDAT 1 22-JAN-25 9F9H 0 JRNL AUTH Q.BERTRAND,P.NOGLY,E.NANGO,D.KEKILLI,G.KHUSAINOV,A.FURRER, JRNL AUTH 2 D.JAMES,F.DWORKOWSKI,P.SKOPINTSEV,S.MOUS,I.MARTIEL, JRNL AUTH 3 P.BORJESSON,G.ORTOLANI,C.Y.HUANG,M.KEPA,D.OZEROV,S.BRUNLE, JRNL AUTH 4 V.PANNEELS,T.TANAKA,R.TANAKA,K.TONO,S.OWADA,P.J.M.JOHNSON, JRNL AUTH 5 K.NASS,G.KNOPP,C.CIRELLI,C.MILNE,G.SCHERTLER,S.IWATA, JRNL AUTH 6 R.NEUTZE,T.WEINERT,J.STANDFUSS JRNL TITL STRUCTURAL EFFECTS OF HIGH LASER POWER DENSITIES ON AN EARLY JRNL TITL 2 BACTERIORHODOPSIN PHOTOCYCLE INTERMEDIATE. JRNL REF NAT COMMUN V. 15 10278 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39604356 JRNL DOI 10.1038/S41467-024-54422-8 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20_4459: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 27736 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.150 REMARK 3 FREE R VALUE TEST SET COUNT : 1983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 16.0200 - 3.9800 0.99 1979 153 0.2027 0.2268 REMARK 3 2 3.9800 - 3.1700 0.98 1940 145 0.2003 0.2349 REMARK 3 3 3.1700 - 2.7700 0.98 1920 149 0.1909 0.2440 REMARK 3 4 2.7700 - 2.5200 0.98 1913 143 0.1951 0.2186 REMARK 3 5 2.5200 - 2.3400 0.96 1888 152 0.1991 0.2662 REMARK 3 6 2.3400 - 2.2000 0.97 1907 146 0.1979 0.2558 REMARK 3 7 2.2000 - 2.0900 0.97 1878 146 0.2140 0.2605 REMARK 3 8 2.0900 - 2.0000 0.96 1881 146 0.2304 0.2757 REMARK 3 9 2.0000 - 1.9200 0.95 1859 147 0.2751 0.3222 REMARK 3 10 1.9200 - 1.8600 0.94 1820 142 0.3164 0.3408 REMARK 3 11 1.8600 - 1.8000 0.91 1804 132 0.3812 0.3851 REMARK 3 12 1.8000 - 1.7500 0.90 1770 139 0.3942 0.4255 REMARK 3 13 1.7500 - 1.7000 0.87 1684 128 0.4781 0.4703 REMARK 3 14 1.7000 - 1.6600 0.76 1510 115 0.5432 0.5849 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 2122 REMARK 3 ANGLE : 1.586 2824 REMARK 3 CHIRALITY : 0.100 311 REMARK 3 PLANARITY : 0.019 332 REMARK 3 DIHEDRAL : 16.576 810 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6663 27.3694 29.9601 REMARK 3 T TENSOR REMARK 3 T11: 0.1304 T22: 0.1592 REMARK 3 T33: 0.3207 T12: 0.0414 REMARK 3 T13: 0.0156 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 1.6357 L22: 4.1370 REMARK 3 L33: 7.8664 L12: 1.1773 REMARK 3 L13: -1.6781 L23: -4.4978 REMARK 3 S TENSOR REMARK 3 S11: -0.1915 S12: 0.0874 S13: -0.1939 REMARK 3 S21: -0.2566 S22: -0.0761 S23: -0.4250 REMARK 3 S31: 0.6353 S32: 0.6299 S33: 0.1288 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3180 27.9900 41.4823 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.1051 REMARK 3 T33: 0.2534 T12: 0.0081 REMARK 3 T13: -0.0178 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.0388 L22: 1.6553 REMARK 3 L33: 2.3422 L12: 0.1062 REMARK 3 L13: -0.7521 L23: 1.7013 REMARK 3 S TENSOR REMARK 3 S11: -0.0302 S12: -0.1035 S13: -0.0818 REMARK 3 S21: 0.2446 S22: -0.0008 S23: -0.0672 REMARK 3 S31: 0.2661 S32: -0.0720 S33: 0.0605 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7657 38.9950 28.7212 REMARK 3 T TENSOR REMARK 3 T11: 0.0974 T22: 0.1297 REMARK 3 T33: 0.2373 T12: -0.0059 REMARK 3 T13: 0.0028 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 1.2786 L22: 1.4186 REMARK 3 L33: 5.8338 L12: -0.3343 REMARK 3 L13: -0.3189 L23: 1.1379 REMARK 3 S TENSOR REMARK 3 S11: 0.0406 S12: 0.1844 S13: 0.0772 REMARK 3 S21: -0.1159 S22: 0.0100 S23: -0.1161 REMARK 3 S31: -0.1028 S32: 0.0484 S33: -0.0612 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5849 46.3313 37.5348 REMARK 3 T TENSOR REMARK 3 T11: 0.1235 T22: 0.1484 REMARK 3 T33: 0.2460 T12: 0.0198 REMARK 3 T13: -0.0139 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.6807 L22: 1.3661 REMARK 3 L33: 7.2113 L12: -0.2885 REMARK 3 L13: -0.2078 L23: -0.7413 REMARK 3 S TENSOR REMARK 3 S11: 0.1293 S12: -0.2022 S13: 0.0064 REMARK 3 S21: 0.0745 S22: 0.1736 S23: 0.0369 REMARK 3 S31: 0.1001 S32: -0.2567 S33: -0.2875 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1045 53.5841 32.9633 REMARK 3 T TENSOR REMARK 3 T11: 0.1282 T22: 0.1157 REMARK 3 T33: 0.2600 T12: -0.0326 REMARK 3 T13: -0.0241 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.7862 L22: 1.5846 REMARK 3 L33: 3.8033 L12: -0.5495 REMARK 3 L13: 0.6894 L23: -2.0699 REMARK 3 S TENSOR REMARK 3 S11: 0.0450 S12: 0.0276 S13: 0.1374 REMARK 3 S21: 0.1842 S22: 0.0447 S23: -0.0454 REMARK 3 S31: -0.5650 S32: 0.3341 S33: 0.0388 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6936 46.8838 58.0517 REMARK 3 T TENSOR REMARK 3 T11: 0.7186 T22: 0.7429 REMARK 3 T33: 0.5086 T12: -0.0299 REMARK 3 T13: -0.0111 T23: 0.0718 REMARK 3 L TENSOR REMARK 3 L11: 5.3697 L22: 5.9973 REMARK 3 L33: 6.2149 L12: -5.2926 REMARK 3 L13: 4.9672 L23: -6.0199 REMARK 3 S TENSOR REMARK 3 S11: -0.5055 S12: -0.9165 S13: 0.5079 REMARK 3 S21: 1.2714 S22: 0.8068 S23: 0.0613 REMARK 3 S31: -1.2948 S32: -1.0154 S33: -0.3210 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9686 42.3189 35.4743 REMARK 3 T TENSOR REMARK 3 T11: 0.1112 T22: 0.1691 REMARK 3 T33: 0.2540 T12: -0.0487 REMARK 3 T13: -0.0377 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 0.6301 L22: 0.8498 REMARK 3 L33: 4.0660 L12: -0.0964 REMARK 3 L13: -0.6497 L23: -0.7702 REMARK 3 S TENSOR REMARK 3 S11: -0.0307 S12: 0.0454 S13: -0.0487 REMARK 3 S21: 0.0978 S22: 0.0096 S23: -0.1688 REMARK 3 S31: -0.3225 S32: 0.2802 S33: 0.0281 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7694 32.0481 56.4697 REMARK 3 T TENSOR REMARK 3 T11: 0.3396 T22: 0.5239 REMARK 3 T33: 0.1904 T12: 0.0043 REMARK 3 T13: -0.1775 T23: 0.0936 REMARK 3 L TENSOR REMARK 3 L11: 5.0444 L22: 1.4900 REMARK 3 L33: 4.3081 L12: -0.7545 REMARK 3 L13: 2.2566 L23: -2.4688 REMARK 3 S TENSOR REMARK 3 S11: -0.0797 S12: -0.0770 S13: -0.0881 REMARK 3 S21: 0.4903 S22: 0.0193 S23: -0.4582 REMARK 3 S31: 0.6457 S32: 0.6893 S33: -0.0007 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1678 30.3329 65.0597 REMARK 3 T TENSOR REMARK 3 T11: 0.6973 T22: 0.3578 REMARK 3 T33: 0.1659 T12: -0.0751 REMARK 3 T13: -0.1182 T23: 0.0561 REMARK 3 L TENSOR REMARK 3 L11: 5.3156 L22: 1.9584 REMARK 3 L33: 2.0506 L12: -3.2309 REMARK 3 L13: 3.3036 L23: -2.0035 REMARK 3 S TENSOR REMARK 3 S11: 0.4446 S12: -0.8309 S13: -0.4642 REMARK 3 S21: 0.4602 S22: -0.1308 S23: -0.0530 REMARK 3 S31: 0.3901 S32: -0.2604 S33: -0.3450 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9F9H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1292135921. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : CXI REMARK 200 X-RAY GENERATOR MODEL : SLAC LCLS BEAMLINE CXI REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.3 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : CS-PAD CXI-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL 0.9.1 REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL 0.9.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35453 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 19.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 194.0 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.1900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NA/K PHOSPHATE BUFFER PH 5.6 30 REMARK 280 % PEG 2000, LIPIDIC CUBIC PHASE, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.85000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.85000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.85000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 SER A 158 OG REMARK 470 LYS A 172 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH11 ARG A 82 O HOH A 403 1.45 REMARK 500 OG SER A 162 O HOH A 401 1.96 REMARK 500 O GLU A 234 O HOH A 402 2.05 REMARK 500 O HOH A 412 O HOH A 422 2.12 REMARK 500 NH1 ARG A 82 O HOH A 403 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 141 CB SER A 141 OG 0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LI1 A 301 REMARK 610 LI1 A 302 REMARK 610 LI1 A 303 REMARK 610 LI1 A 304 REMARK 610 LI1 A 305 REMARK 610 LI1 A 310 REMARK 610 LI1 A 311 REMARK 610 LI1 A 312 REMARK 610 LI1 A 313 REMARK 610 LI1 A 314 REMARK 610 LI1 A 315 REMARK 610 LI1 A 316 DBREF 9F9H A 5 234 UNP P02945 BACR_HALSA 18 247 SEQADV 9F9H ALA A 4 UNP P02945 EXPRESSION TAG SEQRES 1 A 231 ALA THR GLY ARG PRO GLU TRP ILE TRP LEU ALA LEU GLY SEQRES 2 A 231 THR ALA LEU MET GLY LEU GLY THR LEU TYR PHE LEU VAL SEQRES 3 A 231 LYS GLY MET GLY VAL SER ASP PRO ASP ALA LYS LYS PHE SEQRES 4 A 231 TYR ALA ILE THR THR LEU VAL PRO ALA ILE ALA PHE THR SEQRES 5 A 231 MET TYR LEU SER MET LEU LEU GLY TYR GLY LEU THR MET SEQRES 6 A 231 VAL PRO PHE GLY GLY GLU GLN ASN PRO ILE TYR TRP ALA SEQRES 7 A 231 ARG TYR ALA ASP TRP LEU PHE THR THR PRO LEU LEU LEU SEQRES 8 A 231 LEU ASP LEU ALA LEU LEU VAL ASP ALA ASP GLN GLY THR SEQRES 9 A 231 ILE LEU ALA LEU VAL GLY ALA ASP GLY ILE MET ILE GLY SEQRES 10 A 231 THR GLY LEU VAL GLY ALA LEU THR LYS VAL TYR SER TYR SEQRES 11 A 231 ARG PHE VAL TRP TRP ALA ILE SER THR ALA ALA MET LEU SEQRES 12 A 231 TYR ILE LEU TYR VAL LEU PHE PHE GLY PHE THR SER LYS SEQRES 13 A 231 ALA GLU SER MET ARG PRO GLU VAL ALA SER THR PHE LYS SEQRES 14 A 231 VAL LEU ARG ASN VAL THR VAL VAL LEU TRP SER ALA TYR SEQRES 15 A 231 PRO VAL VAL TRP LEU ILE GLY SER GLU GLY ALA GLY ILE SEQRES 16 A 231 VAL PRO LEU ASN ILE GLU THR LEU LEU PHE MET VAL LEU SEQRES 17 A 231 ASP VAL SER ALA LYS VAL GLY PHE GLY LEU ILE LEU LEU SEQRES 18 A 231 ARG SER ARG ALA ILE PHE GLY GLU ALA GLU HET LI1 A 301 19 HET LI1 A 302 8 HET LI1 A 303 16 HET LI1 A 304 19 HET LI1 A 305 17 HET OLC A 306 65 HET OLC A 307 65 HET OLC A 308 65 HET OLC A 309 65 HET LI1 A 310 16 HET LI1 A 311 19 HET LI1 A 312 8 HET LI1 A 313 13 HET LI1 A 314 19 HET LI1 A 315 6 HET LI1 A 316 12 HET RET A 317 48 HETNAM LI1 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14- HETNAM 2 LI1 TRIMETHYLHEXADECAN-16-YL]GLYCEROL HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM RET RETINAL HETSYN LI1 LIPID FRAGMENT HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 LI1 12(C42 H86 O3) FORMUL 7 OLC 4(C21 H40 O4) FORMUL 18 RET C20 H28 O FORMUL 19 HOH *40(H2 O) HELIX 1 AA1 GLU A 9 GLY A 31 1 23 HELIX 2 AA2 ASP A 36 LEU A 62 1 27 HELIX 3 AA3 TRP A 80 VAL A 101 1 22 HELIX 4 AA4 ASP A 104 THR A 128 1 25 HELIX 5 AA5 VAL A 130 PHE A 154 1 25 HELIX 6 AA6 PHE A 156 GLU A 161 1 6 HELIX 7 AA7 ARG A 164 GLY A 192 1 29 HELIX 8 AA8 PRO A 200 ARG A 225 1 26 SHEET 1 AA1 2 THR A 67 PHE A 71 0 SHEET 2 AA1 2 GLU A 74 ILE A 78 -1 O ILE A 78 N THR A 67 LINK NZ LYS A 216 C15 RET A 317 1555 1555 1.33 CRYST1 62.950 62.950 111.700 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015886 0.009172 0.000000 0.00000 SCALE2 0.000000 0.018343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008953 0.00000