HEADER PROTON TRANSPORT 07-MAY-24 9F9I TITLE LASER EXCITATION EFFECTS ON BR: DARK DATASET RECORDED AT SACLA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIORHODOPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BR,BACTERIOOPSIN,BO; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM; SOURCE 3 ORGANISM_TAXID: 2242; SOURCE 4 ATCC: 700922; SOURCE 5 GENE: BOP, VNG_1467G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACTERIORHODOSPIN, PROTON TRANSPORT, MEMBRANE, RETINAL, TIME-RESOLVED KEYWDS 2 CRYSTALLOGRAPHY, SERIAL CRYSTALLOGRAPHY, LASER EXCITATION EXPDTA X-RAY DIFFRACTION AUTHOR Q.BERTRAND,T.WEINERT,J.STANDFUSS REVDAT 1 22-JAN-25 9F9I 0 JRNL AUTH Q.BERTRAND,P.NOGLY,E.NANGO,D.KEKILLI,G.KHUSAINOV,A.FURRER, JRNL AUTH 2 D.JAMES,F.DWORKOWSKI,P.SKOPINTSEV,S.MOUS,I.MARTIEL, JRNL AUTH 3 P.BORJESSON,G.ORTOLANI,C.Y.HUANG,M.KEPA,D.OZEROV,S.BRUNLE, JRNL AUTH 4 V.PANNEELS,T.TANAKA,R.TANAKA,K.TONO,S.OWADA,P.J.M.JOHNSON, JRNL AUTH 5 K.NASS,G.KNOPP,C.CIRELLI,C.MILNE,G.SCHERTLER,S.IWATA, JRNL AUTH 6 R.NEUTZE,T.WEINERT,J.STANDFUSS JRNL TITL STRUCTURAL EFFECTS OF HIGH LASER POWER DENSITIES ON AN EARLY JRNL TITL 2 BACTERIORHODOPSIN PHOTOCYCLE INTERMEDIATE. JRNL REF NAT COMMUN V. 15 10278 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39604356 JRNL DOI 10.1038/S41467-024-54422-8 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20_4459: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 32349 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.160 REMARK 3 FREE R VALUE TEST SET COUNT : 1994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.2300 - 3.8600 1.00 2187 152 0.1531 0.1824 REMARK 3 2 3.8500 - 3.0600 1.00 2190 144 0.1362 0.1751 REMARK 3 3 3.0600 - 2.6700 1.00 2180 141 0.1482 0.1433 REMARK 3 4 2.6700 - 2.4300 1.00 2157 149 0.1379 0.1655 REMARK 3 5 2.4300 - 2.2600 1.00 2166 142 0.1269 0.1675 REMARK 3 6 2.2600 - 2.1200 1.00 2173 139 0.1284 0.1570 REMARK 3 7 2.1200 - 2.0200 1.00 2152 143 0.1435 0.1531 REMARK 3 8 2.0200 - 1.9300 1.00 2177 142 0.1391 0.1741 REMARK 3 9 1.9300 - 1.8500 1.00 2180 139 0.1553 0.1869 REMARK 3 10 1.8500 - 1.7900 1.00 2145 137 0.1694 0.2345 REMARK 3 11 1.7900 - 1.7300 1.00 2166 143 0.1946 0.2335 REMARK 3 12 1.7300 - 1.6800 1.00 2151 142 0.2175 0.2844 REMARK 3 13 1.6800 - 1.6400 1.00 2165 138 0.2469 0.2838 REMARK 3 14 1.6400 - 1.6000 1.00 2166 143 0.2698 0.2949 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2147 REMARK 3 ANGLE : 1.182 2853 REMARK 3 CHIRALITY : 0.075 312 REMARK 3 PLANARITY : 0.009 335 REMARK 3 DIHEDRAL : 15.746 455 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6324 27.1637 29.8210 REMARK 3 T TENSOR REMARK 3 T11: 0.1365 T22: 0.1870 REMARK 3 T33: 0.3009 T12: 0.0317 REMARK 3 T13: -0.0037 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 3.3649 L22: 7.6121 REMARK 3 L33: 5.5236 L12: 1.6116 REMARK 3 L13: -2.6252 L23: -5.6777 REMARK 3 S TENSOR REMARK 3 S11: -0.1306 S12: 0.2160 S13: -0.1499 REMARK 3 S21: -0.2990 S22: -0.0159 S23: -0.4376 REMARK 3 S31: 0.4068 S32: 0.2210 S33: 0.1825 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2023 27.7280 41.1771 REMARK 3 T TENSOR REMARK 3 T11: 0.2603 T22: 0.1918 REMARK 3 T33: 0.2479 T12: 0.0165 REMARK 3 T13: -0.0281 T23: 0.0422 REMARK 3 L TENSOR REMARK 3 L11: 2.1506 L22: 1.9459 REMARK 3 L33: 1.6420 L12: -0.1371 REMARK 3 L13: -0.4883 L23: 1.3648 REMARK 3 S TENSOR REMARK 3 S11: -0.0448 S12: -0.3433 S13: -0.1319 REMARK 3 S21: 0.4420 S22: 0.0475 S23: -0.0390 REMARK 3 S31: 0.4377 S32: -0.0979 S33: 0.0231 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6421 38.6794 28.6410 REMARK 3 T TENSOR REMARK 3 T11: 0.1870 T22: 0.1998 REMARK 3 T33: 0.2102 T12: 0.0064 REMARK 3 T13: -0.0126 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.7658 L22: 2.5235 REMARK 3 L33: 1.2457 L12: -0.3199 REMARK 3 L13: -0.4327 L23: 0.8175 REMARK 3 S TENSOR REMARK 3 S11: 0.0315 S12: 0.2269 S13: 0.0066 REMARK 3 S21: -0.2937 S22: 0.0089 S23: -0.0338 REMARK 3 S31: -0.0568 S32: -0.1485 S33: -0.0411 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5492 45.9376 37.1993 REMARK 3 T TENSOR REMARK 3 T11: 0.1827 T22: 0.1706 REMARK 3 T33: 0.2293 T12: 0.0189 REMARK 3 T13: -0.0300 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.8349 L22: 1.9448 REMARK 3 L33: 9.4067 L12: 0.0335 REMARK 3 L13: -0.8751 L23: -2.1844 REMARK 3 S TENSOR REMARK 3 S11: 0.1292 S12: -0.1443 S13: 0.0203 REMARK 3 S21: 0.0793 S22: 0.1904 S23: 0.0487 REMARK 3 S31: 0.1003 S32: -0.2312 S33: -0.3491 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1132 53.1879 32.8403 REMARK 3 T TENSOR REMARK 3 T11: 0.2045 T22: 0.1755 REMARK 3 T33: 0.2579 T12: -0.0218 REMARK 3 T13: -0.0031 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 3.3206 L22: 2.9818 REMARK 3 L33: 5.5728 L12: 0.1092 REMARK 3 L13: 0.2860 L23: -2.1129 REMARK 3 S TENSOR REMARK 3 S11: 0.0900 S12: -0.0250 S13: 0.2335 REMARK 3 S21: 0.2464 S22: -0.0845 S23: -0.1232 REMARK 3 S31: -0.5131 S32: 0.3949 S33: 0.0463 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7046 46.5209 57.7572 REMARK 3 T TENSOR REMARK 3 T11: 1.0671 T22: 0.9261 REMARK 3 T33: 0.6843 T12: 0.0340 REMARK 3 T13: -0.0482 T23: -0.0708 REMARK 3 L TENSOR REMARK 3 L11: 5.5475 L22: 3.7842 REMARK 3 L33: 5.7085 L12: -4.5446 REMARK 3 L13: 5.6198 L23: -4.6330 REMARK 3 S TENSOR REMARK 3 S11: -0.9621 S12: -2.0321 S13: 1.0497 REMARK 3 S21: 1.2310 S22: 0.5732 S23: -0.2086 REMARK 3 S31: -2.3035 S32: -0.3161 S33: 0.3793 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9133 41.9897 35.2981 REMARK 3 T TENSOR REMARK 3 T11: 0.1930 T22: 0.2375 REMARK 3 T33: 0.2877 T12: -0.0315 REMARK 3 T13: -0.0441 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.0925 L22: 1.2176 REMARK 3 L33: 3.1333 L12: -0.1151 REMARK 3 L13: -0.3664 L23: -0.6359 REMARK 3 S TENSOR REMARK 3 S11: -0.0150 S12: -0.1189 S13: 0.0581 REMARK 3 S21: 0.1894 S22: 0.0404 S23: -0.2686 REMARK 3 S31: -0.2669 S32: 0.1377 S33: -0.0292 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7118 31.4564 55.2073 REMARK 3 T TENSOR REMARK 3 T11: 0.4537 T22: 0.6644 REMARK 3 T33: 0.4891 T12: 0.0195 REMARK 3 T13: -0.1802 T23: 0.1561 REMARK 3 L TENSOR REMARK 3 L11: 2.0002 L22: 3.0935 REMARK 3 L33: 2.4753 L12: 1.9389 REMARK 3 L13: -4.7916 L23: -0.1200 REMARK 3 S TENSOR REMARK 3 S11: -0.1115 S12: -0.0355 S13: -0.6387 REMARK 3 S21: 0.9720 S22: -0.3657 S23: -1.5042 REMARK 3 S31: 0.9438 S32: 1.7200 S33: 0.0005 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0731 30.0620 64.7397 REMARK 3 T TENSOR REMARK 3 T11: 0.8047 T22: 0.5389 REMARK 3 T33: 0.2152 T12: -0.0769 REMARK 3 T13: -0.1386 T23: 0.0678 REMARK 3 L TENSOR REMARK 3 L11: 3.6886 L22: 0.6396 REMARK 3 L33: 2.1366 L12: -1.3440 REMARK 3 L13: 1.6924 L23: -0.1636 REMARK 3 S TENSOR REMARK 3 S11: 0.4566 S12: -0.5697 S13: -0.4377 REMARK 3 S21: 0.4034 S22: -0.0154 S23: 0.0059 REMARK 3 S31: 0.4772 S32: -0.1632 S33: -0.3105 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9F9I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1292135922. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : BL3 REMARK 200 X-RAY GENERATOR MODEL : SACLA BEAMLINE BL3 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.227 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MPCCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL 0.9.1 REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL 0.9.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32843 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.590 REMARK 200 RESOLUTION RANGE LOW (A) : 31.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 1944. REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NA/K PHOSPHATE BUFFER PH 5.6 30 REMARK 280 % PEG 2000, LIPIDIC CUBIC PHASE, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.58500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.58500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.58500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 SER A 158 OG REMARK 470 LYS A 172 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET A 32 O HOH A 401 2.01 REMARK 500 OD2 ASP A 104 O HOH A 402 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LI1 A 301 REMARK 610 LI1 A 302 REMARK 610 LI1 A 303 REMARK 610 LI1 A 304 REMARK 610 LI1 A 305 REMARK 610 LI1 A 311 REMARK 610 LI1 A 312 REMARK 610 LI1 A 313 REMARK 610 LI1 A 314 REMARK 610 LI1 A 315 REMARK 610 LI1 A 316 REMARK 610 LI1 A 317 DBREF 9F9I A 5 234 UNP P02945 BACR_HALSA 18 247 SEQADV 9F9I GLY A 4 UNP P02945 EXPRESSION TAG SEQRES 1 A 231 GLY THR GLY ARG PRO GLU TRP ILE TRP LEU ALA LEU GLY SEQRES 2 A 231 THR ALA LEU MET GLY LEU GLY THR LEU TYR PHE LEU VAL SEQRES 3 A 231 LYS GLY MET GLY VAL SER ASP PRO ASP ALA LYS LYS PHE SEQRES 4 A 231 TYR ALA ILE THR THR LEU VAL PRO ALA ILE ALA PHE THR SEQRES 5 A 231 MET TYR LEU SER MET LEU LEU GLY TYR GLY LEU THR MET SEQRES 6 A 231 VAL PRO PHE GLY GLY GLU GLN ASN PRO ILE TYR TRP ALA SEQRES 7 A 231 ARG TYR ALA ASP TRP LEU PHE THR THR PRO LEU LEU LEU SEQRES 8 A 231 LEU ASP LEU ALA LEU LEU VAL ASP ALA ASP GLN GLY THR SEQRES 9 A 231 ILE LEU ALA LEU VAL GLY ALA ASP GLY ILE MET ILE GLY SEQRES 10 A 231 THR GLY LEU VAL GLY ALA LEU THR LYS VAL TYR SER TYR SEQRES 11 A 231 ARG PHE VAL TRP TRP ALA ILE SER THR ALA ALA MET LEU SEQRES 12 A 231 TYR ILE LEU TYR VAL LEU PHE PHE GLY PHE THR SER LYS SEQRES 13 A 231 ALA GLU SER MET ARG PRO GLU VAL ALA SER THR PHE LYS SEQRES 14 A 231 VAL LEU ARG ASN VAL THR VAL VAL LEU TRP SER ALA TYR SEQRES 15 A 231 PRO VAL VAL TRP LEU ILE GLY SER GLU GLY ALA GLY ILE SEQRES 16 A 231 VAL PRO LEU ASN ILE GLU THR LEU LEU PHE MET VAL LEU SEQRES 17 A 231 ASP VAL SER ALA LYS VAL GLY PHE GLY LEU ILE LEU LEU SEQRES 18 A 231 ARG SER ARG ALA ILE PHE GLY GLU ALA GLU HET LI1 A 301 19 HET LI1 A 302 8 HET LI1 A 303 16 HET LI1 A 304 19 HET LI1 A 305 17 HET OLC A 306 65 HET OLC A 307 65 HET OLC A 308 65 HET OLC A 309 65 HET OLC A 310 65 HET LI1 A 311 16 HET LI1 A 312 19 HET LI1 A 313 8 HET LI1 A 314 13 HET LI1 A 315 19 HET LI1 A 316 6 HET LI1 A 317 19 HET RET A 318 48 HETNAM LI1 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14- HETNAM 2 LI1 TRIMETHYLHEXADECAN-16-YL]GLYCEROL HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM RET RETINAL HETSYN LI1 LIPID FRAGMENT HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 LI1 12(C42 H86 O3) FORMUL 7 OLC 5(C21 H40 O4) FORMUL 19 RET C20 H28 O FORMUL 20 HOH *45(H2 O) HELIX 1 AA1 GLU A 9 GLY A 31 1 23 HELIX 2 AA2 ASP A 36 LEU A 62 1 27 HELIX 3 AA3 TRP A 80 VAL A 101 1 22 HELIX 4 AA4 ASP A 104 THR A 128 1 25 HELIX 5 AA5 VAL A 130 GLY A 155 1 26 HELIX 6 AA6 GLY A 155 GLU A 161 1 7 HELIX 7 AA7 ARG A 164 GLY A 192 1 29 HELIX 8 AA8 PRO A 200 ARG A 225 1 26 HELIX 9 AA9 SER A 226 PHE A 230 5 5 SHEET 1 AA1 2 THR A 67 PHE A 71 0 SHEET 2 AA1 2 GLU A 74 ILE A 78 -1 O ILE A 78 N THR A 67 LINK NZ LYS A 216 C15 RET A 318 1555 1555 1.34 CRYST1 62.450 62.450 111.170 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016013 0.009245 0.000000 0.00000 SCALE2 0.000000 0.018490 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008995 0.00000