HEADER PROTON TRANSPORT 07-MAY-24 9F9J TITLE LASER EXCITATION EFFECTS ON BR: EXTRAPOLATED 10PS LIGHT DATASET TITLE 2 RECORDED AT 1281 GW/CM2 AT SACLA (+100PS, 1NS, 10NS) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIORHODOPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BR,BACTERIOOPSIN,BO; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM; SOURCE 3 ORGANISM_TAXID: 2242; SOURCE 4 ATCC: 700922; SOURCE 5 GENE: BOP, VNG_1467G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACTERIORHODOSPIN, PROTON TRANSPORT, MEMBRANE, RETINAL, TIME-RESOLVED KEYWDS 2 CRYSTALLOGRAPHY, SERIAL CRYSTALLOGRAPHY, LASER EXCITATION EXPDTA X-RAY DIFFRACTION AUTHOR Q.BERTRAND,T.WEINERT,J.STANDFUSS REVDAT 1 22-JAN-25 9F9J 0 JRNL AUTH Q.BERTRAND,P.NOGLY,E.NANGO,D.KEKILLI,G.KHUSAINOV,A.FURRER, JRNL AUTH 2 D.JAMES,F.DWORKOWSKI,P.SKOPINTSEV,S.MOUS,I.MARTIEL, JRNL AUTH 3 P.BORJESSON,G.ORTOLANI,C.Y.HUANG,M.KEPA,D.OZEROV,S.BRUNLE, JRNL AUTH 4 V.PANNEELS,T.TANAKA,R.TANAKA,K.TONO,S.OWADA,P.J.M.JOHNSON, JRNL AUTH 5 K.NASS,G.KNOPP,C.CIRELLI,C.MILNE,G.SCHERTLER,S.IWATA, JRNL AUTH 6 R.NEUTZE,T.WEINERT,J.STANDFUSS JRNL TITL STRUCTURAL EFFECTS OF HIGH LASER POWER DENSITIES ON AN EARLY JRNL TITL 2 BACTERIORHODOPSIN PHOTOCYCLE INTERMEDIATE. JRNL REF NAT COMMUN V. 15 10278 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39604356 JRNL DOI 10.1038/S41467-024-54422-8 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20_4459: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 3 NUMBER OF REFLECTIONS : 22437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2024 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 16.0200 - 4.2200 0.99 1618 165 0.2000 0.2252 REMARK 3 2 4.2200 - 3.3600 0.99 1626 160 0.1927 0.2311 REMARK 3 3 3.3600 - 2.9400 0.98 1601 156 0.2096 0.2641 REMARK 3 4 2.9300 - 2.6700 0.98 1576 154 0.2227 0.2533 REMARK 3 5 2.6700 - 2.4800 0.97 1569 164 0.2541 0.3185 REMARK 3 6 2.4800 - 2.3300 0.96 1526 157 0.2693 0.3506 REMARK 3 7 2.3300 - 2.2200 0.94 1545 149 0.3075 0.4059 REMARK 3 8 2.2200 - 2.1200 0.93 1510 145 0.3347 0.3778 REMARK 3 9 2.1200 - 2.0400 0.91 1456 144 0.3804 0.4379 REMARK 3 10 2.0400 - 1.9700 0.87 1397 138 0.4095 0.4525 REMARK 3 11 1.9700 - 1.9100 0.84 1348 134 0.4819 0.5951 REMARK 3 12 1.9100 - 1.8500 0.80 1286 123 0.5810 0.6569 REMARK 3 13 1.8500 - 1.8000 0.77 1255 128 0.5533 0.6050 REMARK 3 14 1.8000 - 1.7600 0.69 1100 107 0.5890 0.5904 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 42.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2148 REMARK 3 ANGLE : 0.886 2852 REMARK 3 CHIRALITY : 0.042 309 REMARK 3 PLANARITY : 0.019 335 REMARK 3 DIHEDRAL : 16.249 833 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8812 27.3452 29.7122 REMARK 3 T TENSOR REMARK 3 T11: 0.3072 T22: 0.3147 REMARK 3 T33: 0.3983 T12: 0.0374 REMARK 3 T13: -0.0095 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 3.1479 L22: 6.3980 REMARK 3 L33: 6.4960 L12: 1.7981 REMARK 3 L13: -2.8559 L23: -5.3944 REMARK 3 S TENSOR REMARK 3 S11: -0.1875 S12: 0.1821 S13: -0.1092 REMARK 3 S21: -0.6151 S22: 0.1225 S23: -0.4178 REMARK 3 S31: 1.1149 S32: 0.2829 S33: 0.0083 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1916 28.0547 41.6512 REMARK 3 T TENSOR REMARK 3 T11: 0.3647 T22: 0.2812 REMARK 3 T33: 0.4014 T12: 0.0238 REMARK 3 T13: -0.0542 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 2.0512 L22: 0.8768 REMARK 3 L33: 2.5456 L12: -0.3924 REMARK 3 L13: -0.6410 L23: 1.4103 REMARK 3 S TENSOR REMARK 3 S11: 0.1698 S12: -0.1455 S13: -0.0371 REMARK 3 S21: 0.1578 S22: 0.2925 S23: -0.0502 REMARK 3 S31: 0.5072 S32: -0.1544 S33: -0.5449 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9154 39.1383 27.9078 REMARK 3 T TENSOR REMARK 3 T11: 0.3064 T22: 0.3304 REMARK 3 T33: 0.3327 T12: -0.0026 REMARK 3 T13: 0.0104 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.3633 L22: 1.7798 REMARK 3 L33: 4.4698 L12: 0.3481 REMARK 3 L13: -0.0544 L23: 1.3805 REMARK 3 S TENSOR REMARK 3 S11: 0.0179 S12: 0.2501 S13: 0.0122 REMARK 3 S21: -0.3121 S22: 0.0788 S23: -0.0380 REMARK 3 S31: 0.0606 S32: -0.1696 S33: -0.1168 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7694 46.3503 37.0339 REMARK 3 T TENSOR REMARK 3 T11: 0.3336 T22: 0.3545 REMARK 3 T33: 0.3659 T12: 0.0310 REMARK 3 T13: -0.0526 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.6756 L22: 2.3243 REMARK 3 L33: 2.2893 L12: -0.6879 REMARK 3 L13: -0.8181 L23: -1.2416 REMARK 3 S TENSOR REMARK 3 S11: 0.2209 S12: -0.0029 S13: 0.0240 REMARK 3 S21: 0.0995 S22: 0.3265 S23: -0.0213 REMARK 3 S31: 0.1321 S32: -0.4865 S33: -0.5230 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5980 53.5485 33.6096 REMARK 3 T TENSOR REMARK 3 T11: 0.3384 T22: 0.2689 REMARK 3 T33: 0.3732 T12: -0.0798 REMARK 3 T13: 0.0011 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 3.2782 L22: 1.8095 REMARK 3 L33: 3.6829 L12: -0.8918 REMARK 3 L13: 0.4233 L23: -2.6463 REMARK 3 S TENSOR REMARK 3 S11: 0.0737 S12: 0.0467 S13: 0.1729 REMARK 3 S21: 0.2657 S22: 0.0513 S23: -0.0026 REMARK 3 S31: -1.4973 S32: 1.0445 S33: -0.0725 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7566 46.9259 57.9332 REMARK 3 T TENSOR REMARK 3 T11: 1.7056 T22: 1.1692 REMARK 3 T33: 0.7552 T12: -0.0530 REMARK 3 T13: 0.0449 T23: -0.1488 REMARK 3 L TENSOR REMARK 3 L11: 5.6009 L22: 6.1482 REMARK 3 L33: 5.2680 L12: -3.7205 REMARK 3 L13: 2.6930 L23: -5.4857 REMARK 3 S TENSOR REMARK 3 S11: -0.6266 S12: -1.1289 S13: 0.3426 REMARK 3 S21: 2.4293 S22: 0.1890 S23: 0.3196 REMARK 3 S31: -2.8851 S32: -2.3533 S33: 0.9141 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0602 42.4500 35.7776 REMARK 3 T TENSOR REMARK 3 T11: 0.3765 T22: 0.3490 REMARK 3 T33: 0.4172 T12: -0.0695 REMARK 3 T13: -0.0477 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 0.6079 L22: -0.0352 REMARK 3 L33: 5.5475 L12: -0.3158 REMARK 3 L13: -0.9951 L23: -1.4280 REMARK 3 S TENSOR REMARK 3 S11: -0.0102 S12: 0.0820 S13: -0.0527 REMARK 3 S21: 0.1042 S22: 0.0604 S23: -0.1903 REMARK 3 S31: -0.3200 S32: 0.2903 S33: -0.0358 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9292 31.7537 55.3892 REMARK 3 T TENSOR REMARK 3 T11: 0.5075 T22: 0.5204 REMARK 3 T33: 0.5629 T12: -0.0573 REMARK 3 T13: -0.0752 T23: 0.2415 REMARK 3 L TENSOR REMARK 3 L11: 3.5178 L22: 5.4705 REMARK 3 L33: 3.0120 L12: -2.0254 REMARK 3 L13: -0.8471 L23: 3.9339 REMARK 3 S TENSOR REMARK 3 S11: -0.6474 S12: -0.4286 S13: 0.0656 REMARK 3 S21: 1.4202 S22: -0.9325 S23: -0.8730 REMARK 3 S31: -0.1498 S32: 0.5549 S33: 1.0487 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2507 30.2882 64.8345 REMARK 3 T TENSOR REMARK 3 T11: 0.7288 T22: 0.4830 REMARK 3 T33: 0.3718 T12: -0.1231 REMARK 3 T13: -0.1207 T23: 0.0223 REMARK 3 L TENSOR REMARK 3 L11: 4.0361 L22: 1.3875 REMARK 3 L33: 2.5667 L12: 0.1236 REMARK 3 L13: 1.7309 L23: -1.5347 REMARK 3 S TENSOR REMARK 3 S11: 1.1945 S12: -0.0854 S13: -0.4490 REMARK 3 S21: 1.3052 S22: -0.0390 S23: -0.2625 REMARK 3 S31: -0.6323 S32: 1.7779 S33: -1.3699 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9F9J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1292138402. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : BL3 REMARK 200 X-RAY GENERATOR MODEL : SACLA BEAMLINE BL3 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.227 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MPCCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL 0.9.1 REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL 0.9.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29412 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 31.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 425.0 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA/K PHOSPHATE PH5.4, 30% PEG REMARK 280 2000, LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.85000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.85000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.85000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 163 -169.51 -124.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 7 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LI1 A 301 REMARK 610 LI1 A 302 REMARK 610 LI1 A 303 REMARK 610 LI1 A 304 REMARK 610 LI1 A 305 REMARK 610 LI1 A 311 REMARK 610 LI1 A 312 REMARK 610 LI1 A 313 REMARK 610 LI1 A 314 REMARK 610 LI1 A 315 REMARK 610 LI1 A 316 DBREF 9F9J A 5 234 UNP P02945 BACR_HALSA 18 247 SEQADV 9F9J ALA A 4 UNP P02945 EXPRESSION TAG SEQRES 1 A 231 ALA THR GLY ARG PRO GLU TRP ILE TRP LEU ALA LEU GLY SEQRES 2 A 231 THR ALA LEU MET GLY LEU GLY THR LEU TYR PHE LEU VAL SEQRES 3 A 231 LYS GLY MET GLY VAL SER ASP PRO ASP ALA LYS LYS PHE SEQRES 4 A 231 TYR ALA ILE THR THR LEU VAL PRO ALA ILE ALA PHE THR SEQRES 5 A 231 MET TYR LEU SER MET LEU LEU GLY TYR GLY LEU THR MET SEQRES 6 A 231 VAL PRO PHE GLY GLY GLU GLN ASN PRO ILE TYR TRP ALA SEQRES 7 A 231 ARG TYR ALA ASP TRP LEU PHE THR THR PRO LEU LEU LEU SEQRES 8 A 231 LEU ASP LEU ALA LEU LEU VAL ASP ALA ASP GLN GLY THR SEQRES 9 A 231 ILE LEU ALA LEU VAL GLY ALA ASP GLY ILE MET ILE GLY SEQRES 10 A 231 THR GLY LEU VAL GLY ALA LEU THR LYS VAL TYR SER TYR SEQRES 11 A 231 ARG PHE VAL TRP TRP ALA ILE SER THR ALA ALA MET LEU SEQRES 12 A 231 TYR ILE LEU TYR VAL LEU PHE PHE GLY PHE THR SER LYS SEQRES 13 A 231 ALA GLU SER MET ARG PRO GLU VAL ALA SER THR PHE LYS SEQRES 14 A 231 VAL LEU ARG ASN VAL THR VAL VAL LEU TRP SER ALA TYR SEQRES 15 A 231 PRO VAL VAL TRP LEU ILE GLY SER GLU GLY ALA GLY ILE SEQRES 16 A 231 VAL PRO LEU ASN ILE GLU THR LEU LEU PHE MET VAL LEU SEQRES 17 A 231 ASP VAL SER ALA LYS VAL GLY PHE GLY LEU ILE LEU LEU SEQRES 18 A 231 ARG SER ARG ALA ILE PHE GLY GLU ALA GLU HET LI1 A 301 19 HET LI1 A 302 8 HET LI1 A 303 16 HET LI1 A 304 19 HET LI1 A 305 17 HET OLC A 306 65 HET OLC A 307 65 HET OLC A 308 65 HET OLC A 309 65 HET OLC A 310 65 HET LI1 A 311 16 HET LI1 A 312 19 HET LI1 A 313 13 HET LI1 A 314 19 HET LI1 A 315 6 HET LI1 A 316 13 HET RET A 317 48 HETNAM LI1 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14- HETNAM 2 LI1 TRIMETHYLHEXADECAN-16-YL]GLYCEROL HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM RET RETINAL HETSYN LI1 LIPID FRAGMENT HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 LI1 11(C42 H86 O3) FORMUL 7 OLC 5(C21 H40 O4) FORMUL 18 RET C20 H28 O FORMUL 19 HOH *28(H2 O) HELIX 1 AA1 GLU A 9 GLY A 31 1 23 HELIX 2 AA2 ASP A 36 LEU A 62 1 27 HELIX 3 AA3 TRP A 80 ASP A 102 1 23 HELIX 4 AA4 ASP A 104 THR A 128 1 25 HELIX 5 AA5 VAL A 130 GLY A 155 1 26 HELIX 6 AA6 PHE A 156 GLU A 161 1 6 HELIX 7 AA7 ARG A 164 SER A 183 1 20 HELIX 8 AA8 ALA A 184 GLY A 192 1 9 HELIX 9 AA9 PRO A 200 ARG A 225 1 26 HELIX 10 AB1 SER A 226 PHE A 230 5 5 SHEET 1 AA1 2 THR A 67 PHE A 71 0 SHEET 2 AA1 2 GLU A 74 ILE A 78 -1 O ILE A 78 N THR A 67 LINK NZ LYS A 216 C15 RET A 317 1555 1555 1.34 CRYST1 62.950 62.950 111.700 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015886 0.009172 0.000000 0.00000 SCALE2 0.000000 0.018343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008953 0.00000