data_9FDM # _entry.id 9FDM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9FDM pdb_00009fdm 10.2210/pdb9fdm/pdb WWPDB D_1292138709 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-06-04 ? 2 'Structure model' 1 1 2025-07-23 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Obsolete ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_database_PDB_obs_spr 2 2 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_database_status.status_code' 2 2 'Structure model' '_pdbx_database_status.status_code_sf' # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2025-07-23 _pdbx_database_PDB_obs_spr.pdb_id 9RT6 _pdbx_database_PDB_obs_spr.replace_pdb_id 9FDM _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9FDM _pdbx_database_status.recvd_initial_deposition_date 2024-05-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email solange.morera@i2bc.paris-saclay.fr _pdbx_contact_author.name_first Solange _pdbx_contact_author.name_last Morera _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7781-0448 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Morera, S.' 1 0000-0001-7781-0448 'Vigouroux, A.' 2 0000-0003-3531-5320 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'To be determined later' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Morera, S.' 1 ? primary 'Vigouroux, A.' 2 ? primary 'Vicogne, J.' 3 ? primary 'Melnyk, O.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn Schistosomin 8943.024 2 ? ? ? ? 2 non-polymer syn BIOTIN 244.311 2 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer nat 'SULFATE ION' 96.063 4 ? ? ? ? 5 water nat water 18.015 47 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Schistosomin-like precursor' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code DNYRCPNPGDAFECFESDATARFCVSGKRGAYVICSKCRRKYEFCANGAKVSKRPEVECRADWASTECTSENSDVPSVMK _entity_poly.pdbx_seq_one_letter_code_can DNYRCPNPGDAFECFESDATARFCVSGKRGAYVICSKCRRKYEFCANGAKVSKRPEVECRADWASTECTSENSDVPSVMK _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 BIOTIN BTN 3 'SODIUM ION' NA 4 'SULFATE ION' SO4 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ASN n 1 3 TYR n 1 4 ARG n 1 5 CYS n 1 6 PRO n 1 7 ASN n 1 8 PRO n 1 9 GLY n 1 10 ASP n 1 11 ALA n 1 12 PHE n 1 13 GLU n 1 14 CYS n 1 15 PHE n 1 16 GLU n 1 17 SER n 1 18 ASP n 1 19 ALA n 1 20 THR n 1 21 ALA n 1 22 ARG n 1 23 PHE n 1 24 CYS n 1 25 VAL n 1 26 SER n 1 27 GLY n 1 28 LYS n 1 29 ARG n 1 30 GLY n 1 31 ALA n 1 32 TYR n 1 33 VAL n 1 34 ILE n 1 35 CYS n 1 36 SER n 1 37 LYS n 1 38 CYS n 1 39 ARG n 1 40 ARG n 1 41 LYS n 1 42 TYR n 1 43 GLU n 1 44 PHE n 1 45 CYS n 1 46 ALA n 1 47 ASN n 1 48 GLY n 1 49 ALA n 1 50 LYS n 1 51 VAL n 1 52 SER n 1 53 LYS n 1 54 ARG n 1 55 PRO n 1 56 GLU n 1 57 VAL n 1 58 GLU n 1 59 CYS n 1 60 ARG n 1 61 ALA n 1 62 ASP n 1 63 TRP n 1 64 ALA n 1 65 SER n 1 66 THR n 1 67 GLU n 1 68 CYS n 1 69 THR n 1 70 SER n 1 71 GLU n 1 72 ASN n 1 73 SER n 1 74 ASP n 1 75 VAL n 1 76 PRO n 1 77 SER n 1 78 VAL n 1 79 MET n 1 80 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 80 _pdbx_entity_src_syn.organism_scientific Schistosoma _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 6181 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BTN non-polymer . BIOTIN ? 'C10 H16 N2 O3 S' 244.311 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 18 ? ? ? A . n A 1 2 ASN 2 19 ? ? ? A . n A 1 3 TYR 3 20 20 TYR TYR A . n A 1 4 ARG 4 21 21 ARG ARG A . n A 1 5 CYS 5 22 22 CYS CYS A . n A 1 6 PRO 6 23 23 PRO PRO A . n A 1 7 ASN 7 24 24 ASN ASN A . n A 1 8 PRO 8 25 25 PRO PRO A . n A 1 9 GLY 9 26 26 GLY GLY A . n A 1 10 ASP 10 27 27 ASP ASP A . n A 1 11 ALA 11 28 28 ALA ALA A . n A 1 12 PHE 12 29 29 PHE PHE A . n A 1 13 GLU 13 30 30 GLU GLU A . n A 1 14 CYS 14 31 31 CYS CYS A . n A 1 15 PHE 15 32 32 PHE PHE A . n A 1 16 GLU 16 33 33 GLU GLU A . n A 1 17 SER 17 34 34 SER SER A . n A 1 18 ASP 18 35 35 ASP ASP A . n A 1 19 ALA 19 36 36 ALA ALA A . n A 1 20 THR 20 37 37 THR THR A . n A 1 21 ALA 21 38 38 ALA ALA A . n A 1 22 ARG 22 39 39 ARG ARG A . n A 1 23 PHE 23 40 40 PHE PHE A . n A 1 24 CYS 24 41 41 CYS CYS A . n A 1 25 VAL 25 42 42 VAL VAL A . n A 1 26 SER 26 43 43 SER SER A . n A 1 27 GLY 27 44 44 GLY GLY A . n A 1 28 LYS 28 45 45 LYS LYS A . n A 1 29 ARG 29 46 46 ARG ARG A . n A 1 30 GLY 30 47 47 GLY GLY A . n A 1 31 ALA 31 48 48 ALA ALA A . n A 1 32 TYR 32 49 49 TYR TYR A . n A 1 33 VAL 33 50 50 VAL VAL A . n A 1 34 ILE 34 51 51 ILE ILE A . n A 1 35 CYS 35 52 52 CYS CYS A . n A 1 36 SER 36 53 53 SER SER A . n A 1 37 LYS 37 54 54 LYS LYS A . n A 1 38 CYS 38 55 55 CYS CYS A . n A 1 39 ARG 39 56 56 ARG ARG A . n A 1 40 ARG 40 57 57 ARG ARG A . n A 1 41 LYS 41 58 58 LYS LYS A . n A 1 42 TYR 42 59 59 TYR TYR A . n A 1 43 GLU 43 60 60 GLU GLU A . n A 1 44 PHE 44 61 61 PHE PHE A . n A 1 45 CYS 45 62 62 CYS CYS A . n A 1 46 ALA 46 63 63 ALA ALA A . n A 1 47 ASN 47 64 64 ASN ASN A . n A 1 48 GLY 48 65 65 GLY GLY A . n A 1 49 ALA 49 66 66 ALA ALA A . n A 1 50 LYS 50 67 67 LYS LYS A . n A 1 51 VAL 51 68 68 VAL VAL A . n A 1 52 SER 52 69 69 SER SER A . n A 1 53 LYS 53 70 70 LYS LYS A . n A 1 54 ARG 54 71 71 ARG ARG A . n A 1 55 PRO 55 72 72 PRO PRO A . n A 1 56 GLU 56 73 73 GLU GLU A . n A 1 57 VAL 57 74 74 VAL VAL A . n A 1 58 GLU 58 75 75 GLU GLU A . n A 1 59 CYS 59 76 76 CYS CYS A . n A 1 60 ARG 60 77 77 ARG ARG A . n A 1 61 ALA 61 78 78 ALA ALA A . n A 1 62 ASP 62 79 79 ASP ASP A . n A 1 63 TRP 63 80 80 TRP TRP A . n A 1 64 ALA 64 81 81 ALA ALA A . n A 1 65 SER 65 82 82 SER SER A . n A 1 66 THR 66 83 83 THR THR A . n A 1 67 GLU 67 84 84 GLU GLU A . n A 1 68 CYS 68 85 85 CYS CYS A . n A 1 69 THR 69 86 86 THR THR A . n A 1 70 SER 70 87 87 SER SER A . n A 1 71 GLU 71 88 88 GLU GLU A . n A 1 72 ASN 72 89 89 ASN ASN A . n A 1 73 SER 73 90 90 SER SER A . n A 1 74 ASP 74 91 91 ASP ASP A . n A 1 75 VAL 75 92 92 VAL VAL A . n A 1 76 PRO 76 93 93 PRO PRO A . n A 1 77 SER 77 94 94 SER SER A . n A 1 78 VAL 78 95 95 VAL VAL A . n A 1 79 MET 79 96 96 MET MET A . n A 1 80 LYS 80 97 97 LYS LYS A . n B 1 1 ASP 1 18 ? ? ? B . n B 1 2 ASN 2 19 ? ? ? B . n B 1 3 TYR 3 20 ? ? ? B . n B 1 4 ARG 4 21 21 ARG ARG B . n B 1 5 CYS 5 22 22 CYS CYS B . n B 1 6 PRO 6 23 23 PRO PRO B . n B 1 7 ASN 7 24 24 ASN ASN B . n B 1 8 PRO 8 25 25 PRO PRO B . n B 1 9 GLY 9 26 26 GLY GLY B . n B 1 10 ASP 10 27 27 ASP ASP B . n B 1 11 ALA 11 28 28 ALA ALA B . n B 1 12 PHE 12 29 29 PHE PHE B . n B 1 13 GLU 13 30 30 GLU GLU B . n B 1 14 CYS 14 31 31 CYS CYS B . n B 1 15 PHE 15 32 32 PHE PHE B . n B 1 16 GLU 16 33 33 GLU GLU B . n B 1 17 SER 17 34 34 SER SER B . n B 1 18 ASP 18 35 35 ASP ASP B . n B 1 19 ALA 19 36 36 ALA ALA B . n B 1 20 THR 20 37 37 THR THR B . n B 1 21 ALA 21 38 38 ALA ALA B . n B 1 22 ARG 22 39 39 ARG ARG B . n B 1 23 PHE 23 40 40 PHE PHE B . n B 1 24 CYS 24 41 41 CYS CYS B . n B 1 25 VAL 25 42 42 VAL VAL B . n B 1 26 SER 26 43 43 SER SER B . n B 1 27 GLY 27 44 44 GLY GLY B . n B 1 28 LYS 28 45 45 LYS LYS B . n B 1 29 ARG 29 46 46 ARG ARG B . n B 1 30 GLY 30 47 47 GLY GLY B . n B 1 31 ALA 31 48 48 ALA ALA B . n B 1 32 TYR 32 49 49 TYR TYR B . n B 1 33 VAL 33 50 50 VAL VAL B . n B 1 34 ILE 34 51 51 ILE ILE B . n B 1 35 CYS 35 52 52 CYS CYS B . n B 1 36 SER 36 53 53 SER SER B . n B 1 37 LYS 37 54 54 LYS LYS B . n B 1 38 CYS 38 55 55 CYS CYS B . n B 1 39 ARG 39 56 56 ARG ARG B . n B 1 40 ARG 40 57 57 ARG ARG B . n B 1 41 LYS 41 58 58 LYS LYS B . n B 1 42 TYR 42 59 59 TYR TYR B . n B 1 43 GLU 43 60 60 GLU GLU B . n B 1 44 PHE 44 61 61 PHE PHE B . n B 1 45 CYS 45 62 62 CYS CYS B . n B 1 46 ALA 46 63 63 ALA ALA B . n B 1 47 ASN 47 64 64 ASN ASN B . n B 1 48 GLY 48 65 65 GLY GLY B . n B 1 49 ALA 49 66 66 ALA ALA B . n B 1 50 LYS 50 67 67 LYS LYS B . n B 1 51 VAL 51 68 68 VAL VAL B . n B 1 52 SER 52 69 69 SER SER B . n B 1 53 LYS 53 70 70 LYS LYS B . n B 1 54 ARG 54 71 71 ARG ARG B . n B 1 55 PRO 55 72 72 PRO PRO B . n B 1 56 GLU 56 73 73 GLU GLU B . n B 1 57 VAL 57 74 74 VAL VAL B . n B 1 58 GLU 58 75 75 GLU GLU B . n B 1 59 CYS 59 76 76 CYS CYS B . n B 1 60 ARG 60 77 77 ARG ARG B . n B 1 61 ALA 61 78 78 ALA ALA B . n B 1 62 ASP 62 79 79 ASP ASP B . n B 1 63 TRP 63 80 80 TRP TRP B . n B 1 64 ALA 64 81 81 ALA ALA B . n B 1 65 SER 65 82 82 SER SER B . n B 1 66 THR 66 83 83 THR THR B . n B 1 67 GLU 67 84 84 GLU GLU B . n B 1 68 CYS 68 85 85 CYS CYS B . n B 1 69 THR 69 86 86 THR THR B . n B 1 70 SER 70 87 87 SER SER B . n B 1 71 GLU 71 88 88 GLU GLU B . n B 1 72 ASN 72 89 89 ASN ASN B . n B 1 73 SER 73 90 90 SER SER B . n B 1 74 ASP 74 91 91 ASP ASP B . n B 1 75 VAL 75 92 92 VAL VAL B . n B 1 76 PRO 76 93 93 PRO PRO B . n B 1 77 SER 77 94 94 SER SER B . n B 1 78 VAL 78 95 95 VAL VAL B . n B 1 79 MET 79 96 96 MET MET B . n B 1 80 LYS 80 97 97 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BTN 1 101 101 BTN BTN A . D 3 NA 1 102 1 NA NA A . E 4 SO4 1 103 2 SO4 SO4 A . F 4 SO4 1 104 3 SO4 SO4 A . G 4 SO4 1 105 4 SO4 SO4 A . H 2 BTN 1 101 101 BTN BTN B . I 4 SO4 1 102 1 SO4 SO4 B . J 5 HOH 1 201 4 HOH HOH A . J 5 HOH 2 202 28 HOH HOH A . J 5 HOH 3 203 15 HOH HOH A . J 5 HOH 4 204 55 HOH HOH A . J 5 HOH 5 205 24 HOH HOH A . J 5 HOH 6 206 57 HOH HOH A . J 5 HOH 7 207 65 HOH HOH A . J 5 HOH 8 208 40 HOH HOH A . J 5 HOH 9 209 33 HOH HOH A . J 5 HOH 10 210 45 HOH HOH A . J 5 HOH 11 211 26 HOH HOH A . J 5 HOH 12 212 27 HOH HOH A . J 5 HOH 13 213 29 HOH HOH A . J 5 HOH 14 214 46 HOH HOH A . J 5 HOH 15 215 5 HOH HOH A . J 5 HOH 16 216 12 HOH HOH A . J 5 HOH 17 217 54 HOH HOH A . J 5 HOH 18 218 62 HOH HOH A . J 5 HOH 19 219 37 HOH HOH A . J 5 HOH 20 220 59 HOH HOH A . J 5 HOH 21 221 70 HOH HOH A . J 5 HOH 22 222 72 HOH HOH A . J 5 HOH 23 223 22 HOH HOH A . J 5 HOH 24 224 73 HOH HOH A . J 5 HOH 25 225 58 HOH HOH A . J 5 HOH 26 226 64 HOH HOH A . J 5 HOH 27 227 66 HOH HOH A . K 5 HOH 1 201 69 HOH HOH B . K 5 HOH 2 202 30 HOH HOH B . K 5 HOH 3 203 11 HOH HOH B . K 5 HOH 4 204 13 HOH HOH B . K 5 HOH 5 205 7 HOH HOH B . K 5 HOH 6 206 41 HOH HOH B . K 5 HOH 7 207 68 HOH HOH B . K 5 HOH 8 208 34 HOH HOH B . K 5 HOH 9 209 32 HOH HOH B . K 5 HOH 10 210 61 HOH HOH B . K 5 HOH 11 211 67 HOH HOH B . K 5 HOH 12 212 47 HOH HOH B . K 5 HOH 13 213 8 HOH HOH B . K 5 HOH 14 214 51 HOH HOH B . K 5 HOH 15 215 60 HOH HOH B . K 5 HOH 16 216 71 HOH HOH B . K 5 HOH 17 217 36 HOH HOH B . K 5 HOH 18 218 56 HOH HOH B . K 5 HOH 19 219 9 HOH HOH B . K 5 HOH 20 220 18 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.4 ? 1 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? '1.0.5 20240123' ? 2 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? 'Jun 30, 2023' ? 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.7 ? 4 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? 2.4.9 ? 5 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . ? 6 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 7 # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 94.16 _cell.angle_beta_esd ? _cell.angle_gamma 90 _cell.angle_gamma_esd ? _cell.entry_id 9FDM _cell.details ? _cell.formula_units_Z ? _cell.length_a 20.488 _cell.length_a_esd ? _cell.length_b 38.711 _cell.length_b_esd ? _cell.length_c 87.072 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9FDM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9FDM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'AS, Tris-HCl, NaB' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 292 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-06-13 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91956 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91956 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9FDM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.897 _reflns.d_resolution_low 19.661 _reflns.details ;Some remarks regarding the mmCIF items written, the PDB Exchange Dictionary (PDBx/mmCIF) Version 5.0 supporting the data files in the current PDB archive (dictionary version 5.325, last updated 2020-04-13: http://mmcif.wwpdb.org/dictionaries/mmcif_pdbx_v50.dic/Index/) and the actual quantities provided by MRFANA (https://github.com/githubgphl/MRFANA) from the autoPROC package (https://www.globalphasing.com/autoproc/). In general, the mmCIF categories here should provide items that are currently used in the PDB archive. If there are alternatives, the one recommended by the PDB developers has been selected. The distinction between *_all and *_obs quantities is not always clear: often only one version is actively used within the PDB archive (or is the one recommended by PDB developers). The intention of distinguishing between classes of reflections before and after some kind of observation criterion was applied, can in principle be useful - but such criteria change in various ways throughout the data processing steps (rejection of overloaded or too partial reflections, outlier/misfit rejections during scaling etc) and there is no retrospect computation of data scaling/merging statistics for the reflections used in the final refinement (where another observation criterion might have been applied). Typical data processing will usually only provide one version of statistics at various stages and these are given in the recommended item here, irrespective of the "_all" and "_obs" connotation, see e.g. the use of _reflns.pdbx_Rmerge_I_obs, _reflns.pdbx_Rrim_I_all and _reflns.pdbx_Rpim_I_all. Please note that all statistics related to "merged intensities" (or "merging") are based on inverse-variance weighting of the individual measurements making up a symmetry-unique reflection. This is standard for several decades now, even if some of the dictionary definitions seem to suggest that a simple "mean" or "average" intensity is being used instead. R-values are always given for all symmetry-equivalent reflections following Friedel's law, i.e. Bijvoet pairs are not treated separately (since we want to describe the overall mean intensity and not the mean I(+) and I(-) here). The Rrim metric is identical to the Rmeas R-value and only differs in name. _reflns.pdbx_number_measured_all is the number of measured intensities just before the final merging step (at which point no additional rejection takes place). _reflns.number_obs is the number of symmetry-unique observations, i.e. the result of merging those measurements via inverse-variance weighting. _reflns.pdbx_netI_over_sigmaI is based on the merged intensities (_reflns.number_obs) as expected. _reflns.pdbx_redundancy is synonymous with "multiplicity". The per-shell item _reflns_shell.number_measured_all corresponds to the overall value _reflns.pdbx_number_measured_all. The per-shell item _reflns_shell.number_unique_all corresponds to the overall value _reflns.number_obs. The per-shell item _reflns_shell.percent_possible_all corresponds to the overall value _reflns.percent_possible_obs. The per-shell item _reflns_shell.meanI_over_sigI_obs corresponds to the overall value given as _reflns.pdbx_netI_over_sigmaI. But be aware of the incorrect definition of the former in the current dictionary! ; _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10239 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 91.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.60 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.55 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.2792 _reflns.pdbx_Rpim_I_all 0.1007 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 77793 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.985 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.2600 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] 0.98149 _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] 0.19150 _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] 1.00000 _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] -0.19150 _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] 0.98149 _reflns.pdbx_aniso_diffraction_limit_1 1.80000 _reflns.pdbx_aniso_diffraction_limit_2 1.97700 _reflns.pdbx_aniso_diffraction_limit_3 1.93700 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] 0.8692 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] 0.4944 _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] 1.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] -0.4944 _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] 0.8692 _reflns.pdbx_aniso_B_tensor_eigenvalue_1 2.3031 _reflns.pdbx_aniso_B_tensor_eigenvalue_2 9.8366 _reflns.pdbx_aniso_B_tensor_eigenvalue_3 0.0000 _reflns.pdbx_orthogonalization_convention pdb _reflns.pdbx_percent_possible_ellipsoidal 91.2 _reflns.pdbx_percent_possible_spherical 87.8 _reflns.pdbx_percent_possible_ellipsoidal_anomalous 90.9 _reflns.pdbx_percent_possible_spherical_anomalous 87.4 _reflns.pdbx_redundancy_anomalous 3.95 _reflns.pdbx_CC_half_anomalous -0.220 _reflns.pdbx_absDiff_over_sigma_anomalous 0.682 _reflns.pdbx_percent_possible_anomalous 90.9 _reflns.pdbx_observed_signal_threshold 1.20 _reflns.pdbx_signal_type 'local ' _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 5.423 19.661 ? 12.54 3675 3675 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.18 ? ? ? 0.1078 0.0391 ? 1 ? 0.993 ? ? 100.0 ? 0.1003 ? 100.0 100.0 100.0 100.0 3.95 -0.324 0.555 100.0 4.307 5.422 ? 12.63 4014 4014 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.84 ? ? ? 0.1141 0.0403 ? 2 ? 0.993 ? ? 100.0 ? 0.1066 ? 100.0 100.0 100.0 100.0 4.18 -0.251 0.575 100.0 3.764 4.305 ? 12.28 3995 3995 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.80 ? ? ? 0.1286 0.0460 ? 3 ? 0.982 ? ? 100.0 ? 0.1198 ? 100.0 100.0 100.0 100.0 4.11 -0.592 0.623 100.0 3.410 3.763 ? 10.74 3741 3741 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.31 ? ? ? 0.1468 0.0537 ? 4 ? 0.985 ? ? 100.0 ? 0.1363 ? 100.0 100.0 100.0 100.0 3.83 -0.345 0.664 100.0 3.158 3.410 ? 9.38 3925 3925 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.67 ? ? ? 0.1812 0.0655 ? 5 ? 0.981 ? ? 100.0 ? 0.1687 ? 100.0 100.0 100.0 100.0 3.98 -0.165 0.691 100.0 2.975 3.158 ? 7.91 3945 3945 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.71 ? ? ? 0.2335 0.0839 ? 6 ? 0.973 ? ? 100.0 ? 0.2175 ? 100.0 100.0 100.0 100.0 4.06 -0.186 0.723 100.0 2.827 2.975 ? 7.05 4069 4069 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.95 ? ? ? 0.2514 0.0888 ? 7 ? 0.972 ? ? 100.0 ? 0.2349 ? 100.0 100.0 100.0 100.0 4.10 -0.248 0.715 100.0 2.700 2.826 ? 5.64 4053 4053 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.92 ? ? ? 0.3326 0.1177 ? 8 ? 0.962 ? ? 100.0 ? 0.3107 ? 100.0 100.0 100.0 100.0 4.11 -0.149 0.721 100.0 2.595 2.700 ? 4.87 4058 4058 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.93 ? ? ? 0.3962 0.1404 ? 9 ? 0.925 ? ? 100.0 ? 0.3701 ? 100.0 100.0 100.0 100.0 4.11 -0.063 0.729 100.0 2.504 2.595 ? 4.07 3763 3763 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.35 ? ? ? 0.4586 0.1686 ? 10 ? 0.913 ? ? 100.0 ? 0.4257 ? 100.0 100.0 100.0 100.0 3.78 -0.177 0.691 100.0 2.422 2.504 ? 3.78 3850 3850 ? 511 511 ? ? ? ? ? ? ? ? ? ? ? 7.53 ? ? ? 0.5174 0.1882 ? 11 ? 0.902 ? ? 100.0 ? 0.4812 ? 100.0 100.0 100.0 100.0 3.88 -0.041 0.711 100.0 2.355 2.422 ? 3.20 3672 3672 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.17 ? ? ? 0.6225 0.2314 ? 12 ? 0.818 ? ? 100.0 ? 0.5769 ? 100.0 100.0 99.8 99.8 3.71 0.055 0.721 99.8 2.291 2.355 ? 2.97 3883 3883 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.58 ? ? ? 0.7013 0.2535 ? 13 ? 0.845 ? ? 100.0 ? 0.6530 ? 100.0 100.0 100.0 100.0 3.92 -0.010 0.684 100.0 2.235 2.291 ? 2.62 3919 3919 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.65 ? ? ? 0.7981 0.2871 ? 14 ? 0.817 ? ? 100.0 ? 0.7436 ? 100.0 100.0 100.0 100.0 3.93 -0.027 0.713 100.0 2.183 2.235 ? 2.15 4015 4015 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.84 ? ? ? 0.9998 0.3561 ? 15 ? 0.696 ? ? 100.0 ? 0.9329 ? 100.0 100.0 100.0 100.0 4.02 -0.001 0.711 100.0 2.136 2.183 ? 2.26 3980 3980 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.77 ? ? ? 0.9617 0.3437 ? 16 ? 0.731 ? ? 99.0 ? 0.8969 ? 99.0 99.0 99.0 99.0 4.02 -0.064 0.696 99.0 2.093 2.136 ? 2.07 4044 4044 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.90 ? ? ? 1.0700 0.3786 ? 17 ? 0.756 ? ? 98.7 ? 0.9995 ? 98.7 98.7 97.8 97.8 4.09 -0.056 0.679 97.8 2.048 2.092 ? 1.91 4001 4001 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.81 ? ? ? 1.1751 0.4199 ? 18 ? 0.707 ? ? 88.9 ? 1.0960 ? 88.9 88.9 88.5 88.5 4.01 -0.050 0.657 88.5 1.998 2.047 ? 1.67 3866 3866 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 7.55 ? ? ? 1.2914 0.4657 ? 19 ? 0.612 ? ? 76.1 ? 1.2027 ? 76.1 76.1 76.0 76.0 3.87 0.007 0.679 76.0 1.897 1.998 ? 1.37 3325 3325 ? 512 512 ? ? ? ? ? ? ? ? ? ? ? 6.49 ? ? ? 1.4548 0.5659 ? 20 ? 0.483 ? ? 40.7 ? 1.3358 ? 40.7 30.3 40.5 29.8 3.34 -0.084 0.671 40.5 # _refine.aniso_B[1][1] 3.3948 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] -0.5909 _refine.aniso_B[2][2] -1.63 _refine.aniso_B[2][3] 0 _refine.aniso_B[3][3] -1.7647 _refine.B_iso_max ? _refine.B_iso_mean 54.28 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.926 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9FDM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.099 _refine.ls_d_res_low 43.42 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6702 _refine.ls_number_reflns_R_free 356 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 82.6 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2435 _refine.ls_R_factor_R_free 0.2582 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2426 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.252 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.254 _refine.pdbx_overall_SU_R_Blow_DPI 0.542 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.498 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 9FDM _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.37 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.099 _refine_hist.d_res_low 43.42 _refine_hist.number_atoms_solvent 47 _refine_hist.number_atoms_total 1292 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1194 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1282 ? t_bond_d 2 ? HARMONIC 'X-RAY DIFFRACTION' ? 0.91 ? 1727 ? t_angle_deg 2 ? HARMONIC 'X-RAY DIFFRACTION' ? ? ? 460 ? t_dihedral_angle_d 2 ? SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? 218 ? t_gen_planes 5 ? HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1282 ? t_it 10 ? HARMONIC 'X-RAY DIFFRACTION' ? ? ? 162 ? t_chiral_improper_torsion 5 ? SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? 981 ? t_ideal_dist_contact 4 ? SEMIHARMONIC 'X-RAY DIFFRACTION' ? 3.15 ? ? ? t_omega_torsion ? ? ? 'X-RAY DIFFRACTION' ? 18.5 ? ? ? t_other_torsion ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.1 _refine_ls_shell.d_res_low 2.21 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 395 _refine_ls_shell.number_reflns_R_free 28 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.percent_reflns_obs 34.84 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs 0.3063 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3042 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.correlation_coeff_Fo_to_Fc ? _refine_ls_shell.correlation_coeff_Fo_to_Fc_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.3331 # _struct.entry_id 9FDM _struct.title 'Structure of the toxin Schistosomine 79 from Schistosoma' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9FDM _struct_keywords.text toxin _struct_keywords.pdbx_keywords TOXIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 2 ? I N N 4 ? J N N 5 ? K N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B5L013_BIOGL _struct_ref.pdbx_db_accession B5L013 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code DNYRCPNPGDAFECFESDATARFCVSGKRGAYVICSKCRRKYEFCANGAKVSKRPEVECRADWASTECTSDNSDVPSVM _struct_ref.pdbx_align_begin 18 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9FDM A 1 ? 79 ? B5L013 18 ? 96 ? 18 96 2 1 9FDM B 1 ? 79 ? B5L013 18 ? 96 ? 18 96 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9FDM GLU A 71 ? UNP B5L013 ASP 88 conflict 88 1 1 9FDM LYS A 80 ? UNP B5L013 ? ? 'expression tag' 97 2 2 9FDM GLU B 71 ? UNP B5L013 ASP 88 conflict 88 3 2 9FDM LYS B 80 ? UNP B5L013 ? ? 'expression tag' 97 4 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,J 2 1 B,H,I,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 36 ? GLY A 48 ? SER A 53 GLY A 65 1 ? 13 HELX_P HELX_P2 AA2 ARG A 54 ? CYS A 59 ? ARG A 71 CYS A 76 1 ? 6 HELX_P HELX_P3 AA3 THR A 69 ? ASP A 74 ? THR A 86 ASP A 91 1 ? 6 HELX_P HELX_P4 AA4 SER B 36 ? GLY B 48 ? SER B 53 GLY B 65 1 ? 13 HELX_P HELX_P5 AA5 ARG B 54 ? CYS B 59 ? ARG B 71 CYS B 76 1 ? 6 HELX_P HELX_P6 AA6 THR B 69 ? ASP B 74 ? THR B 86 ASP B 91 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 45 SG ? ? A CYS 22 A CYS 62 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf2 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 38 SG ? ? A CYS 31 A CYS 55 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf3 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 59 SG ? ? A CYS 41 A CYS 76 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf4 disulf ? ? A CYS 35 SG ? ? ? 1_555 A CYS 68 SG ? ? A CYS 52 A CYS 85 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf5 disulf ? ? B CYS 5 SG ? ? ? 1_555 B CYS 45 SG ? ? B CYS 22 B CYS 62 1_555 ? ? ? ? ? ? ? 2.047 ? ? disulf6 disulf ? ? B CYS 14 SG ? ? ? 1_555 B CYS 38 SG ? ? B CYS 31 B CYS 55 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf7 disulf ? ? B CYS 24 SG ? ? ? 1_555 B CYS 59 SG ? ? B CYS 41 B CYS 76 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf8 disulf ? ? B CYS 35 SG ? ? ? 1_555 B CYS 68 SG ? ? B CYS 52 B CYS 85 1_555 ? ? ? ? ? ? ? 2.050 ? ? covale1 covale one ? A LYS 80 NZ ? ? ? 1_555 C BTN . C11 ? ? A LYS 97 A BTN 101 1_555 ? ? ? ? ? ? ? 1.366 ? ? covale2 covale one ? B LYS 80 NZ ? ? ? 1_555 H BTN . C11 ? ? B LYS 97 B BTN 101 1_555 ? ? ? ? ? ? ? 1.374 ? ? metalc1 metalc ? ? D NA . NA ? ? ? 1_555 F SO4 . O4 ? ? A NA 102 A SO4 104 1_555 ? ? ? ? ? ? ? 2.233 ? ? metalc2 metalc ? ? D NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 102 A HOH 205 1_555 ? ? ? ? ? ? ? 2.510 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O4 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id F _pdbx_struct_conn_angle.ptnr1_label_comp_id SO4 _pdbx_struct_conn_angle.ptnr1_label_seq_id . _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id SO4 _pdbx_struct_conn_angle.ptnr1_auth_seq_id 104 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id D _pdbx_struct_conn_angle.ptnr2_label_comp_id NA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id NA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 102 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id J _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 205 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 118.5 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 BTN C . ? LYS A 80 ? BTN A 101 ? 1_555 LYS A 97 ? 1_555 C11 NZ LYS 1 BTN Biotinylation Biotin 2 BTN H . ? LYS B 80 ? BTN B 101 ? 1_555 LYS B 97 ? 1_555 C11 NZ LYS 1 BTN Biotinylation Biotin 3 CYS A 5 ? CYS A 45 ? CYS A 22 ? 1_555 CYS A 62 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 14 ? CYS A 38 ? CYS A 31 ? 1_555 CYS A 55 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 24 ? CYS A 59 ? CYS A 41 ? 1_555 CYS A 76 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 35 ? CYS A 68 ? CYS A 52 ? 1_555 CYS A 85 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS B 5 ? CYS B 45 ? CYS B 22 ? 1_555 CYS B 62 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS B 14 ? CYS B 38 ? CYS B 31 ? 1_555 CYS B 55 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS B 24 ? CYS B 59 ? CYS B 41 ? 1_555 CYS B 76 ? 1_555 SG SG . . . None 'Disulfide bridge' 10 CYS B 35 ? CYS B 68 ? CYS B 52 ? 1_555 CYS B 85 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 30 ? CYS A 35 ? GLY A 47 CYS A 52 AA1 2 ARG A 22 ? GLY A 27 ? ARG A 39 GLY A 44 AA1 3 LYS A 50 ? VAL A 51 ? LYS A 67 VAL A 68 AA2 1 GLY B 30 ? CYS B 35 ? GLY B 47 CYS B 52 AA2 2 ARG B 22 ? GLY B 27 ? ARG B 39 GLY B 44 AA2 3 LYS B 50 ? VAL B 51 ? LYS B 67 VAL B 68 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 30 ? O GLY A 47 N GLY A 27 ? N GLY A 44 AA1 2 3 N SER A 26 ? N SER A 43 O LYS A 50 ? O LYS A 67 AA2 1 2 O TYR B 32 ? O TYR B 49 N VAL B 25 ? N VAL B 42 AA2 2 3 N SER B 26 ? N SER B 43 O LYS B 50 ? O LYS B 67 # _pdbx_entry_details.entry_id 9FDM _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NZ _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 97 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C10 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 BTN _pdbx_validate_close_contact.auth_seq_id_2 101 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 206 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 225 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_655 _pdbx_validate_symm_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 53 ? ? 86.76 149.66 2 1 CYS A 76 ? ? -102.85 -114.74 3 1 ASP A 79 ? ? -91.82 46.83 4 1 SER B 53 ? ? 87.81 150.50 5 1 CYS B 76 ? ? -102.98 -114.17 6 1 ASP B 79 ? ? -92.00 46.52 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? ? 8.0341 0.5774 9.7024 -0.1895 ? 0.1175 ? -0.0418 ? -0.1749 ? -0.0128 ? -0.3552 ? 4.3559 ? 0.7328 ? 2.3694 ? 6.5963 ? -0.2963 ? 8.5462 ? 0.2521 ? -0.1983 ? 0.9618 ? -0.1983 ? 0.0141 ? 0.199 ? 0.9618 ? 0.199 ? -0.2663 ? 2 'X-RAY DIFFRACTION' ? ? 12.7878 -1.3214 32.9276 -0.0895 ? -0.0666 ? -0.0286 ? -0.1067 ? 0.0247 ? -0.3468 ? 8.988 ? -2.4061 ? 1.0478 ? 7.357 ? -0.7519 ? 9.1804 ? 0.0728 ? 0.2294 ? 0.9612 ? 0.2294 ? 0.1874 ? -0.2317 ? 0.9612 ? -0.2317 ? -0.2602 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 20 ? ? ? A 97 ? ? '{ A|* }' 2 'X-RAY DIFFRACTION' 1 ? ? A 101 ? ? ? A 101 ? ? '{ A|* }' 3 'X-RAY DIFFRACTION' 2 ? ? B 21 ? ? ? B 97 ? ? '{ B|* }' 4 'X-RAY DIFFRACTION' 2 ? ? B 101 ? ? ? B 101 ? ? '{ B|* }' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 18 ? A ASP 1 2 1 Y 1 A ASN 19 ? A ASN 2 3 1 Y 1 B ASP 18 ? B ASP 1 4 1 Y 1 B ASN 19 ? B ASN 2 5 1 Y 1 B TYR 20 ? B TYR 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BTN C11 C N N 74 BTN O11 O N N 75 BTN O12 O N N 76 BTN C10 C N N 77 BTN C9 C N N 78 BTN C8 C N N 79 BTN C7 C N N 80 BTN C2 C N S 81 BTN S1 S N N 82 BTN C6 C N N 83 BTN C5 C N R 84 BTN N1 N N N 85 BTN C3 C N N 86 BTN O3 O N N 87 BTN N2 N N N 88 BTN C4 C N S 89 BTN HO2 H N N 90 BTN H101 H N N 91 BTN H102 H N N 92 BTN H91 H N N 93 BTN H92 H N N 94 BTN H81 H N N 95 BTN H82 H N N 96 BTN H71 H N N 97 BTN H72 H N N 98 BTN H2 H N N 99 BTN H61 H N N 100 BTN H62 H N N 101 BTN H5 H N N 102 BTN HN1 H N N 103 BTN HN2 H N N 104 BTN H4 H N N 105 CYS N N N N 106 CYS CA C N R 107 CYS C C N N 108 CYS O O N N 109 CYS CB C N N 110 CYS SG S N N 111 CYS OXT O N N 112 CYS H H N N 113 CYS H2 H N N 114 CYS HA H N N 115 CYS HB2 H N N 116 CYS HB3 H N N 117 CYS HG H N N 118 CYS HXT H N N 119 GLU N N N N 120 GLU CA C N S 121 GLU C C N N 122 GLU O O N N 123 GLU CB C N N 124 GLU CG C N N 125 GLU CD C N N 126 GLU OE1 O N N 127 GLU OE2 O N N 128 GLU OXT O N N 129 GLU H H N N 130 GLU H2 H N N 131 GLU HA H N N 132 GLU HB2 H N N 133 GLU HB3 H N N 134 GLU HG2 H N N 135 GLU HG3 H N N 136 GLU HE2 H N N 137 GLU HXT H N N 138 GLY N N N N 139 GLY CA C N N 140 GLY C C N N 141 GLY O O N N 142 GLY OXT O N N 143 GLY H H N N 144 GLY H2 H N N 145 GLY HA2 H N N 146 GLY HA3 H N N 147 GLY HXT H N N 148 HOH O O N N 149 HOH H1 H N N 150 HOH H2 H N N 151 ILE N N N N 152 ILE CA C N S 153 ILE C C N N 154 ILE O O N N 155 ILE CB C N S 156 ILE CG1 C N N 157 ILE CG2 C N N 158 ILE CD1 C N N 159 ILE OXT O N N 160 ILE H H N N 161 ILE H2 H N N 162 ILE HA H N N 163 ILE HB H N N 164 ILE HG12 H N N 165 ILE HG13 H N N 166 ILE HG21 H N N 167 ILE HG22 H N N 168 ILE HG23 H N N 169 ILE HD11 H N N 170 ILE HD12 H N N 171 ILE HD13 H N N 172 ILE HXT H N N 173 LYS N N N N 174 LYS CA C N S 175 LYS C C N N 176 LYS O O N N 177 LYS CB C N N 178 LYS CG C N N 179 LYS CD C N N 180 LYS CE C N N 181 LYS NZ N N N 182 LYS OXT O N N 183 LYS H H N N 184 LYS H2 H N N 185 LYS HA H N N 186 LYS HB2 H N N 187 LYS HB3 H N N 188 LYS HG2 H N N 189 LYS HG3 H N N 190 LYS HD2 H N N 191 LYS HD3 H N N 192 LYS HE2 H N N 193 LYS HE3 H N N 194 LYS HZ1 H N N 195 LYS HZ2 H N N 196 LYS HZ3 H N N 197 LYS HXT H N N 198 MET N N N N 199 MET CA C N S 200 MET C C N N 201 MET O O N N 202 MET CB C N N 203 MET CG C N N 204 MET SD S N N 205 MET CE C N N 206 MET OXT O N N 207 MET H H N N 208 MET H2 H N N 209 MET HA H N N 210 MET HB2 H N N 211 MET HB3 H N N 212 MET HG2 H N N 213 MET HG3 H N N 214 MET HE1 H N N 215 MET HE2 H N N 216 MET HE3 H N N 217 MET HXT H N N 218 NA NA NA N N 219 PHE N N N N 220 PHE CA C N S 221 PHE C C N N 222 PHE O O N N 223 PHE CB C N N 224 PHE CG C Y N 225 PHE CD1 C Y N 226 PHE CD2 C Y N 227 PHE CE1 C Y N 228 PHE CE2 C Y N 229 PHE CZ C Y N 230 PHE OXT O N N 231 PHE H H N N 232 PHE H2 H N N 233 PHE HA H N N 234 PHE HB2 H N N 235 PHE HB3 H N N 236 PHE HD1 H N N 237 PHE HD2 H N N 238 PHE HE1 H N N 239 PHE HE2 H N N 240 PHE HZ H N N 241 PHE HXT H N N 242 PRO N N N N 243 PRO CA C N S 244 PRO C C N N 245 PRO O O N N 246 PRO CB C N N 247 PRO CG C N N 248 PRO CD C N N 249 PRO OXT O N N 250 PRO H H N N 251 PRO HA H N N 252 PRO HB2 H N N 253 PRO HB3 H N N 254 PRO HG2 H N N 255 PRO HG3 H N N 256 PRO HD2 H N N 257 PRO HD3 H N N 258 PRO HXT H N N 259 SER N N N N 260 SER CA C N S 261 SER C C N N 262 SER O O N N 263 SER CB C N N 264 SER OG O N N 265 SER OXT O N N 266 SER H H N N 267 SER H2 H N N 268 SER HA H N N 269 SER HB2 H N N 270 SER HB3 H N N 271 SER HG H N N 272 SER HXT H N N 273 SO4 S S N N 274 SO4 O1 O N N 275 SO4 O2 O N N 276 SO4 O3 O N N 277 SO4 O4 O N N 278 THR N N N N 279 THR CA C N S 280 THR C C N N 281 THR O O N N 282 THR CB C N R 283 THR OG1 O N N 284 THR CG2 C N N 285 THR OXT O N N 286 THR H H N N 287 THR H2 H N N 288 THR HA H N N 289 THR HB H N N 290 THR HG1 H N N 291 THR HG21 H N N 292 THR HG22 H N N 293 THR HG23 H N N 294 THR HXT H N N 295 TRP N N N N 296 TRP CA C N S 297 TRP C C N N 298 TRP O O N N 299 TRP CB C N N 300 TRP CG C Y N 301 TRP CD1 C Y N 302 TRP CD2 C Y N 303 TRP NE1 N Y N 304 TRP CE2 C Y N 305 TRP CE3 C Y N 306 TRP CZ2 C Y N 307 TRP CZ3 C Y N 308 TRP CH2 C Y N 309 TRP OXT O N N 310 TRP H H N N 311 TRP H2 H N N 312 TRP HA H N N 313 TRP HB2 H N N 314 TRP HB3 H N N 315 TRP HD1 H N N 316 TRP HE1 H N N 317 TRP HE3 H N N 318 TRP HZ2 H N N 319 TRP HZ3 H N N 320 TRP HH2 H N N 321 TRP HXT H N N 322 TYR N N N N 323 TYR CA C N S 324 TYR C C N N 325 TYR O O N N 326 TYR CB C N N 327 TYR CG C Y N 328 TYR CD1 C Y N 329 TYR CD2 C Y N 330 TYR CE1 C Y N 331 TYR CE2 C Y N 332 TYR CZ C Y N 333 TYR OH O N N 334 TYR OXT O N N 335 TYR H H N N 336 TYR H2 H N N 337 TYR HA H N N 338 TYR HB2 H N N 339 TYR HB3 H N N 340 TYR HD1 H N N 341 TYR HD2 H N N 342 TYR HE1 H N N 343 TYR HE2 H N N 344 TYR HH H N N 345 TYR HXT H N N 346 VAL N N N N 347 VAL CA C N S 348 VAL C C N N 349 VAL O O N N 350 VAL CB C N N 351 VAL CG1 C N N 352 VAL CG2 C N N 353 VAL OXT O N N 354 VAL H H N N 355 VAL H2 H N N 356 VAL HA H N N 357 VAL HB H N N 358 VAL HG11 H N N 359 VAL HG12 H N N 360 VAL HG13 H N N 361 VAL HG21 H N N 362 VAL HG22 H N N 363 VAL HG23 H N N 364 VAL HXT H N N 365 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BTN C11 O11 doub N N 70 BTN C11 O12 sing N N 71 BTN C11 C10 sing N N 72 BTN O12 HO2 sing N N 73 BTN C10 C9 sing N N 74 BTN C10 H101 sing N N 75 BTN C10 H102 sing N N 76 BTN C9 C8 sing N N 77 BTN C9 H91 sing N N 78 BTN C9 H92 sing N N 79 BTN C8 C7 sing N N 80 BTN C8 H81 sing N N 81 BTN C8 H82 sing N N 82 BTN C7 C2 sing N N 83 BTN C7 H71 sing N N 84 BTN C7 H72 sing N N 85 BTN C2 S1 sing N N 86 BTN C2 C4 sing N N 87 BTN C2 H2 sing N N 88 BTN S1 C6 sing N N 89 BTN C6 C5 sing N N 90 BTN C6 H61 sing N N 91 BTN C6 H62 sing N N 92 BTN C5 N1 sing N N 93 BTN C5 C4 sing N N 94 BTN C5 H5 sing N N 95 BTN N1 C3 sing N N 96 BTN N1 HN1 sing N N 97 BTN C3 O3 doub N N 98 BTN C3 N2 sing N N 99 BTN N2 C4 sing N N 100 BTN N2 HN2 sing N N 101 BTN C4 H4 sing N N 102 CYS N CA sing N N 103 CYS N H sing N N 104 CYS N H2 sing N N 105 CYS CA C sing N N 106 CYS CA CB sing N N 107 CYS CA HA sing N N 108 CYS C O doub N N 109 CYS C OXT sing N N 110 CYS CB SG sing N N 111 CYS CB HB2 sing N N 112 CYS CB HB3 sing N N 113 CYS SG HG sing N N 114 CYS OXT HXT sing N N 115 GLU N CA sing N N 116 GLU N H sing N N 117 GLU N H2 sing N N 118 GLU CA C sing N N 119 GLU CA CB sing N N 120 GLU CA HA sing N N 121 GLU C O doub N N 122 GLU C OXT sing N N 123 GLU CB CG sing N N 124 GLU CB HB2 sing N N 125 GLU CB HB3 sing N N 126 GLU CG CD sing N N 127 GLU CG HG2 sing N N 128 GLU CG HG3 sing N N 129 GLU CD OE1 doub N N 130 GLU CD OE2 sing N N 131 GLU OE2 HE2 sing N N 132 GLU OXT HXT sing N N 133 GLY N CA sing N N 134 GLY N H sing N N 135 GLY N H2 sing N N 136 GLY CA C sing N N 137 GLY CA HA2 sing N N 138 GLY CA HA3 sing N N 139 GLY C O doub N N 140 GLY C OXT sing N N 141 GLY OXT HXT sing N N 142 HOH O H1 sing N N 143 HOH O H2 sing N N 144 ILE N CA sing N N 145 ILE N H sing N N 146 ILE N H2 sing N N 147 ILE CA C sing N N 148 ILE CA CB sing N N 149 ILE CA HA sing N N 150 ILE C O doub N N 151 ILE C OXT sing N N 152 ILE CB CG1 sing N N 153 ILE CB CG2 sing N N 154 ILE CB HB sing N N 155 ILE CG1 CD1 sing N N 156 ILE CG1 HG12 sing N N 157 ILE CG1 HG13 sing N N 158 ILE CG2 HG21 sing N N 159 ILE CG2 HG22 sing N N 160 ILE CG2 HG23 sing N N 161 ILE CD1 HD11 sing N N 162 ILE CD1 HD12 sing N N 163 ILE CD1 HD13 sing N N 164 ILE OXT HXT sing N N 165 LYS N CA sing N N 166 LYS N H sing N N 167 LYS N H2 sing N N 168 LYS CA C sing N N 169 LYS CA CB sing N N 170 LYS CA HA sing N N 171 LYS C O doub N N 172 LYS C OXT sing N N 173 LYS CB CG sing N N 174 LYS CB HB2 sing N N 175 LYS CB HB3 sing N N 176 LYS CG CD sing N N 177 LYS CG HG2 sing N N 178 LYS CG HG3 sing N N 179 LYS CD CE sing N N 180 LYS CD HD2 sing N N 181 LYS CD HD3 sing N N 182 LYS CE NZ sing N N 183 LYS CE HE2 sing N N 184 LYS CE HE3 sing N N 185 LYS NZ HZ1 sing N N 186 LYS NZ HZ2 sing N N 187 LYS NZ HZ3 sing N N 188 LYS OXT HXT sing N N 189 MET N CA sing N N 190 MET N H sing N N 191 MET N H2 sing N N 192 MET CA C sing N N 193 MET CA CB sing N N 194 MET CA HA sing N N 195 MET C O doub N N 196 MET C OXT sing N N 197 MET CB CG sing N N 198 MET CB HB2 sing N N 199 MET CB HB3 sing N N 200 MET CG SD sing N N 201 MET CG HG2 sing N N 202 MET CG HG3 sing N N 203 MET SD CE sing N N 204 MET CE HE1 sing N N 205 MET CE HE2 sing N N 206 MET CE HE3 sing N N 207 MET OXT HXT sing N N 208 PHE N CA sing N N 209 PHE N H sing N N 210 PHE N H2 sing N N 211 PHE CA C sing N N 212 PHE CA CB sing N N 213 PHE CA HA sing N N 214 PHE C O doub N N 215 PHE C OXT sing N N 216 PHE CB CG sing N N 217 PHE CB HB2 sing N N 218 PHE CB HB3 sing N N 219 PHE CG CD1 doub Y N 220 PHE CG CD2 sing Y N 221 PHE CD1 CE1 sing Y N 222 PHE CD1 HD1 sing N N 223 PHE CD2 CE2 doub Y N 224 PHE CD2 HD2 sing N N 225 PHE CE1 CZ doub Y N 226 PHE CE1 HE1 sing N N 227 PHE CE2 CZ sing Y N 228 PHE CE2 HE2 sing N N 229 PHE CZ HZ sing N N 230 PHE OXT HXT sing N N 231 PRO N CA sing N N 232 PRO N CD sing N N 233 PRO N H sing N N 234 PRO CA C sing N N 235 PRO CA CB sing N N 236 PRO CA HA sing N N 237 PRO C O doub N N 238 PRO C OXT sing N N 239 PRO CB CG sing N N 240 PRO CB HB2 sing N N 241 PRO CB HB3 sing N N 242 PRO CG CD sing N N 243 PRO CG HG2 sing N N 244 PRO CG HG3 sing N N 245 PRO CD HD2 sing N N 246 PRO CD HD3 sing N N 247 PRO OXT HXT sing N N 248 SER N CA sing N N 249 SER N H sing N N 250 SER N H2 sing N N 251 SER CA C sing N N 252 SER CA CB sing N N 253 SER CA HA sing N N 254 SER C O doub N N 255 SER C OXT sing N N 256 SER CB OG sing N N 257 SER CB HB2 sing N N 258 SER CB HB3 sing N N 259 SER OG HG sing N N 260 SER OXT HXT sing N N 261 SO4 S O1 doub N N 262 SO4 S O2 doub N N 263 SO4 S O3 sing N N 264 SO4 S O4 sing N N 265 THR N CA sing N N 266 THR N H sing N N 267 THR N H2 sing N N 268 THR CA C sing N N 269 THR CA CB sing N N 270 THR CA HA sing N N 271 THR C O doub N N 272 THR C OXT sing N N 273 THR CB OG1 sing N N 274 THR CB CG2 sing N N 275 THR CB HB sing N N 276 THR OG1 HG1 sing N N 277 THR CG2 HG21 sing N N 278 THR CG2 HG22 sing N N 279 THR CG2 HG23 sing N N 280 THR OXT HXT sing N N 281 TRP N CA sing N N 282 TRP N H sing N N 283 TRP N H2 sing N N 284 TRP CA C sing N N 285 TRP CA CB sing N N 286 TRP CA HA sing N N 287 TRP C O doub N N 288 TRP C OXT sing N N 289 TRP CB CG sing N N 290 TRP CB HB2 sing N N 291 TRP CB HB3 sing N N 292 TRP CG CD1 doub Y N 293 TRP CG CD2 sing Y N 294 TRP CD1 NE1 sing Y N 295 TRP CD1 HD1 sing N N 296 TRP CD2 CE2 doub Y N 297 TRP CD2 CE3 sing Y N 298 TRP NE1 CE2 sing Y N 299 TRP NE1 HE1 sing N N 300 TRP CE2 CZ2 sing Y N 301 TRP CE3 CZ3 doub Y N 302 TRP CE3 HE3 sing N N 303 TRP CZ2 CH2 doub Y N 304 TRP CZ2 HZ2 sing N N 305 TRP CZ3 CH2 sing Y N 306 TRP CZ3 HZ3 sing N N 307 TRP CH2 HH2 sing N N 308 TRP OXT HXT sing N N 309 TYR N CA sing N N 310 TYR N H sing N N 311 TYR N H2 sing N N 312 TYR CA C sing N N 313 TYR CA CB sing N N 314 TYR CA HA sing N N 315 TYR C O doub N N 316 TYR C OXT sing N N 317 TYR CB CG sing N N 318 TYR CB HB2 sing N N 319 TYR CB HB3 sing N N 320 TYR CG CD1 doub Y N 321 TYR CG CD2 sing Y N 322 TYR CD1 CE1 sing Y N 323 TYR CD1 HD1 sing N N 324 TYR CD2 CE2 doub Y N 325 TYR CD2 HD2 sing N N 326 TYR CE1 CZ doub Y N 327 TYR CE1 HE1 sing N N 328 TYR CE2 CZ sing Y N 329 TYR CE2 HE2 sing N N 330 TYR CZ OH sing N N 331 TYR OH HH sing N N 332 TYR OXT HXT sing N N 333 VAL N CA sing N N 334 VAL N H sing N N 335 VAL N H2 sing N N 336 VAL CA C sing N N 337 VAL CA CB sing N N 338 VAL CA HA sing N N 339 VAL C O doub N N 340 VAL C OXT sing N N 341 VAL CB CG1 sing N N 342 VAL CB CG2 sing N N 343 VAL CB HB sing N N 344 VAL CG1 HG11 sing N N 345 VAL CG1 HG12 sing N N 346 VAL CG1 HG13 sing N N 347 VAL CG2 HG21 sing N N 348 VAL CG2 HG22 sing N N 349 VAL CG2 HG23 sing N N 350 VAL OXT HXT sing N N 351 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9FDM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.048809 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003550 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025832 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011515 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N NA O S # loop_ # loop_ #