HEADER ALLERGEN 28-MAY-24 9FHN TITLE CRYSTAL STRUCTURE OF THE ARGININE KINASE DER P 20.0101 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGININE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.3.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DERMATOPHAGOIDES PTERONYSSINUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN HOUSE DUST MITE; SOURCE 4 ORGANISM_TAXID: 6956; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HOUSE DUST MITE, ALLERGEN, IGE BINDING, ARGININE KINASE, CROSS- KEYWDS 2 REACTIVITY EXPDTA X-RAY DIFFRACTION AUTHOR L.SCHOOLTINK,T.SAGMEISTER,N.TODOROVIC,G.HOFER,W.KELLER REVDAT 1 11-JUN-25 9FHN 0 JRNL AUTH L.SCHOOLTINK,N.TODOROVIC,T.SAGMEISTER,G.HOFER,W.KELLER JRNL TITL CRYSTAL STRUCTURE OF THE ARGININE KINASE TO BE PUBLISHED. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.SARZSINSZKY,C.LUPINEK,S.VRTALA,H.J.HUANG,G.HOFER,W.KELLER, REMARK 1 AUTH 2 K.W.CHEN,C.B.PANAITESCU,Y.RESCH-MARAT,P.ZIEGLMAYER, REMARK 1 AUTH 3 R.ZIEGLMAYER,P.LEMELL,F.HORAK,M.DUCHENE,R.VALENTA REMARK 1 TITL EXPRESSION IN ESCHERICHIA COLI AND PURIFICATION OF FOLDED REMARK 1 TITL 2 RDER P 20, THE ARGININE KINASE FROM DERMATOPHAGOIDES REMARK 1 TITL 3 PTERONYSSINUS: A POSSIBLE BIOMARKER FOR ALLERGIC ASTHMA REMARK 1 REF ALLERGY ASTHMA IMMUNOL RES V. 13 154 2021 REMARK 1 REFN ISSN 2092-7355 REMARK 1 PMID 33191683 REMARK 1 DOI 10.4168/AAIR.2021.13.1.154 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 73.1 REMARK 3 NUMBER OF REFLECTIONS : 40075 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.270 REMARK 3 FREE R VALUE : 0.310 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2044 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1400 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 36.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE SET COUNT : 71 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5580 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 199 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21300 REMARK 3 B22 (A**2) : 1.49400 REMARK 3 B33 (A**2) : -1.16900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.44400 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.361 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.259 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.210 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.280 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.823 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.783 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5695 ; 0.005 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 5498 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7659 ; 1.232 ; 1.664 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12689 ; 0.425 ; 1.586 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 694 ; 6.679 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 34 ; 6.974 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1071 ;14.450 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 825 ; 0.058 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6634 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1302 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1285 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 48 ; 0.244 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2814 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 260 ; 0.243 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2785 ; 0.409 ; 0.268 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2785 ; 0.409 ; 0.268 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3476 ; 0.586 ; 0.478 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3477 ; 0.586 ; 0.479 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2910 ; 0.394 ; 0.304 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2911 ; 0.394 ; 0.304 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4183 ; 0.592 ; 0.541 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4184 ; 0.592 ; 0.541 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 356 NULL REMARK 3 1 A 1 A 356 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 356 REMARK 3 ORIGIN FOR THE GROUP (A): -3.8463 -0.2943 34.6861 REMARK 3 T TENSOR REMARK 3 T11: 0.0090 T22: 0.0208 REMARK 3 T33: 0.0109 T12: 0.0054 REMARK 3 T13: -0.0019 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.6091 L22: 1.0958 REMARK 3 L33: 0.0079 L12: 0.0114 REMARK 3 L13: -0.0036 L23: 0.0674 REMARK 3 S TENSOR REMARK 3 S11: -0.0195 S12: -0.1097 S13: -0.0150 REMARK 3 S21: 0.0928 S22: 0.0196 S23: -0.0495 REMARK 3 S31: 0.0058 S32: 0.0005 S33: -0.0001 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): -16.0238 3.1411 71.9344 REMARK 3 T TENSOR REMARK 3 T11: 0.0142 T22: 0.0159 REMARK 3 T33: 0.0163 T12: -0.0070 REMARK 3 T13: 0.0028 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.5555 L22: 1.0783 REMARK 3 L33: 0.2403 L12: -0.1200 REMARK 3 L13: -0.0104 L23: 0.1085 REMARK 3 S TENSOR REMARK 3 S11: 0.0159 S12: -0.0883 S13: 0.0034 REMARK 3 S21: 0.0839 S22: -0.0185 S23: -0.0637 REMARK 3 S31: -0.0037 S32: 0.0075 S33: 0.0026 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9FHN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1292136906. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAY-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : LIQUID ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : EXCILLUM METALJET D2+ 70 KV REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.34138 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : BRUKER PHOTON III REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49720 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 59.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.14400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE MONOHYDRATE, 0.1 REMARK 280 M BIS-TRIS PH 5.5, 25% W/V POLYETHYLENE GLYCOL 3,350, MICROBATCH, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.51000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 312 REMARK 465 GLY A 313 REMARK 465 GLU A 314 REMARK 465 HIS A 315 REMARK 465 THR A 316 REMARK 465 GLU A 317 REMARK 465 SER A 318 REMARK 465 VAL A 319 REMARK 465 ALA B 312 REMARK 465 GLY B 313 REMARK 465 GLU B 314 REMARK 465 HIS B 315 REMARK 465 THR B 316 REMARK 465 GLU B 317 REMARK 465 SER B 318 REMARK 465 VAL B 319 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG B 124 O HOH B 406 1.37 REMARK 500 HH21 ARG A 126 O HOH A 401 1.41 REMARK 500 HG11 VAL A 113 O HOH A 402 1.45 REMARK 500 HD21 ASN B 199 O HOH B 401 1.54 REMARK 500 O HOH B 420 O HOH B 486 1.57 REMARK 500 O HOH B 406 O HOH B 480 1.95 REMARK 500 NH2 ARG A 126 O HOH A 401 1.97 REMARK 500 O HOH B 403 O HOH B 464 2.04 REMARK 500 ND2 ASN B 199 O HOH B 401 2.10 REMARK 500 OD2 ASP B 183 O HOH B 402 2.11 REMARK 500 O LEU B 268 O HOH B 403 2.13 REMARK 500 O PRO B 272 O HOH B 404 2.14 REMARK 500 O VAL A 111 O HOH A 402 2.15 REMARK 500 O GLY B 321 O HOH B 405 2.16 REMARK 500 NH2 ARG B 124 O HOH B 406 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 486 O HOH B 493 2547 1.86 REMARK 500 O HOH A 475 O HOH A 488 2546 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 65 -68.46 -90.37 REMARK 500 ASP A 114 70.16 -154.50 REMARK 500 TYR A 119 -45.39 -141.43 REMARK 500 ASN A 223 35.92 71.52 REMARK 500 GLU A 224 -118.76 -78.15 REMARK 500 LEU A 275 -168.10 -119.91 REMARK 500 VAL B 65 -70.43 -90.36 REMARK 500 ASP B 114 70.25 -153.20 REMARK 500 TYR B 119 -44.27 -143.57 REMARK 500 ASP B 192 -168.99 -73.08 REMARK 500 ASN B 223 35.66 70.78 REMARK 500 GLU B 224 -119.70 -78.03 REMARK 500 LEU B 275 -167.91 -119.36 REMARK 500 REMARK 500 REMARK: NULL DBREF 9FHN A 1 356 UNP B2ZSY4 B2ZSY4_DERPT 1 356 DBREF 9FHN B 1 356 UNP B2ZSY4 B2ZSY4_DERPT 1 356 SEQRES 1 A 356 MET VAL ASP PRO ALA THR LEU SER LYS LEU GLU ALA GLY SEQRES 2 A 356 PHE GLN LYS LEU GLN ASN ALA GLN ASP CYS HIS SER LEU SEQRES 3 A 356 LEU LYS LYS TYR LEU THR ARG ASP VAL PHE ASP GLN LEU SEQRES 4 A 356 LYS ASN LYS LYS THR ASP MET GLY ALA THR LEU LEU ASP SEQRES 5 A 356 VAL ILE GLN SER GLY VAL GLU ASN LEU ASP SER GLY VAL SEQRES 6 A 356 GLY ILE TYR ALA PRO ASP ALA GLN SER TYR LYS THR PHE SEQRES 7 A 356 ALA ALA LEU PHE ASP PRO ILE ILE ASP ASP TYR HIS LYS SEQRES 8 A 356 GLY PHE LYS PRO THR ASP LYS HIS PRO LYS THR ASP PHE SEQRES 9 A 356 GLY ASN ILE GLU ASN PHE VAL ASN VAL ASP PRO LYS ASN SEQRES 10 A 356 GLU TYR VAL LEU SER THR ARG VAL ARG CYS GLY ARG SER SEQRES 11 A 356 LEU ASN GLY TYR PRO PHE ASN PRO MET LEU THR GLU ALA SEQRES 12 A 356 GLN TYR LYS GLU MET GLU THR LYS VAL LYS GLY GLN LEU SEQRES 13 A 356 ALA THR PHE GLU GLY GLU LEU LYS GLY THR TYR TYR PRO SEQRES 14 A 356 LEU LEU GLY MET ASP LYS ALA THR GLN GLN GLN LEU ILE SEQRES 15 A 356 ASP ASP HIS PHE LEU PHE LYS GLU GLY ASP ARG PHE LEU SEQRES 16 A 356 GLN ALA ALA ASN ALA CYS ARG TYR TRP PRO VAL GLY ARG SEQRES 17 A 356 GLY ILE PHE HIS ASN ASP LYS LYS THR PHE LEU MET TRP SEQRES 18 A 356 VAL ASN GLU GLU ASP HIS LEU ARG ILE ILE SER MET GLN SEQRES 19 A 356 LYS GLY GLY ASP LEU LYS GLU VAL TYR GLY ARG LEU VAL SEQRES 20 A 356 LYS ALA VAL LYS HIS ILE GLU GLN LYS ILE PRO PHE SER SEQRES 21 A 356 ARG ASP ASP ARG LEU GLY PHE LEU THR PHE CYS PRO THR SEQRES 22 A 356 ASN LEU GLY THR THR ILE ARG ALA SER VAL HIS ILE LYS SEQRES 23 A 356 LEU PRO LYS LEU ALA ALA ASP ARG LYS LYS LEU GLU GLU SEQRES 24 A 356 VAL ALA GLY ARG TYR ASN LEU GLN VAL ARG GLY THR ALA SEQRES 25 A 356 GLY GLU HIS THR GLU SER VAL GLY GLY ILE TYR ASP ILE SEQRES 26 A 356 SER ASN LYS ARG ARG MET GLY LEU THR GLU TYR GLN ALA SEQRES 27 A 356 VAL LYS GLU MET GLN ASP GLY ILE LEU GLU LEU ILE LYS SEQRES 28 A 356 MET GLU LYS SER MET SEQRES 1 B 356 MET VAL ASP PRO ALA THR LEU SER LYS LEU GLU ALA GLY SEQRES 2 B 356 PHE GLN LYS LEU GLN ASN ALA GLN ASP CYS HIS SER LEU SEQRES 3 B 356 LEU LYS LYS TYR LEU THR ARG ASP VAL PHE ASP GLN LEU SEQRES 4 B 356 LYS ASN LYS LYS THR ASP MET GLY ALA THR LEU LEU ASP SEQRES 5 B 356 VAL ILE GLN SER GLY VAL GLU ASN LEU ASP SER GLY VAL SEQRES 6 B 356 GLY ILE TYR ALA PRO ASP ALA GLN SER TYR LYS THR PHE SEQRES 7 B 356 ALA ALA LEU PHE ASP PRO ILE ILE ASP ASP TYR HIS LYS SEQRES 8 B 356 GLY PHE LYS PRO THR ASP LYS HIS PRO LYS THR ASP PHE SEQRES 9 B 356 GLY ASN ILE GLU ASN PHE VAL ASN VAL ASP PRO LYS ASN SEQRES 10 B 356 GLU TYR VAL LEU SER THR ARG VAL ARG CYS GLY ARG SER SEQRES 11 B 356 LEU ASN GLY TYR PRO PHE ASN PRO MET LEU THR GLU ALA SEQRES 12 B 356 GLN TYR LYS GLU MET GLU THR LYS VAL LYS GLY GLN LEU SEQRES 13 B 356 ALA THR PHE GLU GLY GLU LEU LYS GLY THR TYR TYR PRO SEQRES 14 B 356 LEU LEU GLY MET ASP LYS ALA THR GLN GLN GLN LEU ILE SEQRES 15 B 356 ASP ASP HIS PHE LEU PHE LYS GLU GLY ASP ARG PHE LEU SEQRES 16 B 356 GLN ALA ALA ASN ALA CYS ARG TYR TRP PRO VAL GLY ARG SEQRES 17 B 356 GLY ILE PHE HIS ASN ASP LYS LYS THR PHE LEU MET TRP SEQRES 18 B 356 VAL ASN GLU GLU ASP HIS LEU ARG ILE ILE SER MET GLN SEQRES 19 B 356 LYS GLY GLY ASP LEU LYS GLU VAL TYR GLY ARG LEU VAL SEQRES 20 B 356 LYS ALA VAL LYS HIS ILE GLU GLN LYS ILE PRO PHE SER SEQRES 21 B 356 ARG ASP ASP ARG LEU GLY PHE LEU THR PHE CYS PRO THR SEQRES 22 B 356 ASN LEU GLY THR THR ILE ARG ALA SER VAL HIS ILE LYS SEQRES 23 B 356 LEU PRO LYS LEU ALA ALA ASP ARG LYS LYS LEU GLU GLU SEQRES 24 B 356 VAL ALA GLY ARG TYR ASN LEU GLN VAL ARG GLY THR ALA SEQRES 25 B 356 GLY GLU HIS THR GLU SER VAL GLY GLY ILE TYR ASP ILE SEQRES 26 B 356 SER ASN LYS ARG ARG MET GLY LEU THR GLU TYR GLN ALA SEQRES 27 B 356 VAL LYS GLU MET GLN ASP GLY ILE LEU GLU LEU ILE LYS SEQRES 28 B 356 MET GLU LYS SER MET FORMUL 3 HOH *199(H2 O) HELIX 1 AA1 ASP A 3 ALA A 20 1 18 HELIX 2 AA2 SER A 25 LEU A 31 1 7 HELIX 3 AA3 THR A 32 LYS A 40 1 9 HELIX 4 AA4 LEU A 50 ASN A 60 1 11 HELIX 5 AA5 GLN A 73 PHE A 78 1 6 HELIX 6 AA6 PHE A 78 HIS A 90 1 13 HELIX 7 AA7 ASN A 106 PHE A 110 5 5 HELIX 8 AA8 THR A 141 ALA A 157 1 17 HELIX 9 AA9 THR A 158 PHE A 159 5 2 HELIX 10 AB1 GLU A 160 LEU A 163 5 4 HELIX 11 AB2 ASP A 174 ASP A 184 1 11 HELIX 12 AB3 ASP A 192 ALA A 198 1 7 HELIX 13 AB4 ASP A 238 ILE A 257 1 20 HELIX 14 AB5 LEU A 287 ALA A 292 1 6 HELIX 15 AB6 ASP A 293 ARG A 303 1 11 HELIX 16 AB7 THR A 334 MET A 356 1 23 HELIX 17 AB8 ASP B 3 ALA B 20 1 18 HELIX 18 AB9 SER B 25 LEU B 31 1 7 HELIX 19 AC1 THR B 32 LYS B 40 1 9 HELIX 20 AC2 LEU B 50 ASN B 60 1 11 HELIX 21 AC3 GLN B 73 PHE B 78 1 6 HELIX 22 AC4 PHE B 78 HIS B 90 1 13 HELIX 23 AC5 ASN B 106 PHE B 110 5 5 HELIX 24 AC6 THR B 141 ALA B 157 1 17 HELIX 25 AC7 THR B 158 PHE B 159 5 2 HELIX 26 AC8 GLU B 160 LEU B 163 5 4 HELIX 27 AC9 ASP B 174 ASP B 184 1 11 HELIX 28 AD1 ASP B 192 ALA B 198 1 7 HELIX 29 AD2 ASP B 238 ILE B 257 1 20 HELIX 30 AD3 ASP B 293 ARG B 303 1 11 HELIX 31 AD4 THR B 334 MET B 356 1 23 SHEET 1 AA1 8 GLY A 165 PRO A 169 0 SHEET 2 AA1 8 GLY A 209 ASN A 213 -1 O ILE A 210 N TYR A 168 SHEET 3 AA1 8 PHE A 218 VAL A 222 -1 O MET A 220 N PHE A 211 SHEET 4 AA1 8 LEU A 228 LYS A 235 -1 O ILE A 231 N LEU A 219 SHEET 5 AA1 8 VAL A 120 ARG A 129 -1 N CYS A 127 O ILE A 230 SHEET 6 AA1 8 ARG A 280 LYS A 286 -1 O SER A 282 N ARG A 124 SHEET 7 AA1 8 ILE A 322 ASN A 327 -1 O TYR A 323 N ILE A 285 SHEET 8 AA1 8 LEU A 306 GLY A 310 -1 N ARG A 309 O ASP A 324 SHEET 1 AA2 2 ARG A 261 ASP A 262 0 SHEET 2 AA2 2 GLY A 266 PHE A 267 -1 O GLY A 266 N ASP A 262 SHEET 1 AA3 8 GLY B 165 PRO B 169 0 SHEET 2 AA3 8 GLY B 209 ASN B 213 -1 O ILE B 210 N TYR B 168 SHEET 3 AA3 8 PHE B 218 VAL B 222 -1 O MET B 220 N PHE B 211 SHEET 4 AA3 8 LEU B 228 LYS B 235 -1 O ILE B 231 N LEU B 219 SHEET 5 AA3 8 VAL B 120 ARG B 129 -1 N CYS B 127 O ILE B 230 SHEET 6 AA3 8 ARG B 280 LYS B 286 -1 O SER B 282 N ARG B 124 SHEET 7 AA3 8 ILE B 322 ASN B 327 -1 O TYR B 323 N ILE B 285 SHEET 8 AA3 8 LEU B 306 GLY B 310 -1 N ARG B 309 O ASP B 324 SHEET 1 AA4 2 ARG B 261 ASP B 262 0 SHEET 2 AA4 2 GLY B 266 PHE B 267 -1 O GLY B 266 N ASP B 262 CISPEP 1 TRP A 204 PRO A 205 0 -9.30 CISPEP 2 TRP B 204 PRO B 205 0 -8.73 CRYST1 48.280 99.020 77.883 90.00 108.06 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020713 0.000000 0.006752 0.00000 SCALE2 0.000000 0.010099 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013505 0.00000 MASTER 386 0 0 31 20 0 0 6 5779 2 0 56 END