HEADER ALLERGEN 28-MAY-24 9FHO TITLE CRYSTAL STRUCTURE OF THE ARGININE KINASE DER P 20_LIKE (PUTATIVE TITLE 2 ISOFORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGININE KINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.3.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DERMATOPHAGOIDES PTERONYSSINUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN HOUSE DUST MITE; SOURCE 4 ORGANISM_TAXID: 6956; SOURCE 5 GENE: LOC113799794; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HOUSE DUST MITE ALLERGEN, IGE BINDING, ARGININE KINASE, CROSS- KEYWDS 2 REACTIVITY, ALLERGEN EXPDTA X-RAY DIFFRACTION AUTHOR L.SCHOOLTINK,T.SAGMEISTER,N.TODOROVIC,G.HOFER,W.KELLER REVDAT 1 11-JUN-25 9FHO 0 JRNL AUTH L.SCHOOLTINK,N.TODOROVIC,G.HOFER,T.SAGMEISTER,W.KELLER JRNL TITL CRYSTAL STRUCTURE OF ARGININE KINASE TO BE PUBLISHED. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.SARZSINSZKY,C.LUPINEK,S.VRTALA,H.J.HUANG,G.HOFER,W.KELLER, REMARK 1 AUTH 2 K.W.CHEN,C.B.PANAITESCU,Y.RESCH-MARAT,P.ZIEGLMAYER, REMARK 1 AUTH 3 R.ZIEGLMAYER,P.LEMELL,F.HORAK,M.DUCHENE,R.VALENTA REMARK 1 TITL EXPRESSION IN ESCHERICHIA COLI AND PURIFICATION OF FOLDED REMARK 1 TITL 2 RDER P 20, THE ARGININE KINASE FROM DERMATOPHAGOIDES REMARK 1 TITL 3 PTERONYSSINUS: A POSSIBLE BIOMARKER FOR ALLERGIC ASTHMA REMARK 1 REF ALLERGY ASTHMA IMMUNOL RES V. 13 154 2021 REMARK 1 REFN ISSN 2092-7355 REMARK 1 PMID 33191683 REMARK 1 DOI 10.4168/AAIR.2021.13.1.154 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 33139 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 1594 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2334 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.3760 REMARK 3 BIN FREE R VALUE SET COUNT : 138 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2779 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 306 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.85100 REMARK 3 B22 (A**2) : 3.34600 REMARK 3 B33 (A**2) : -1.07300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.74300 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.137 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.294 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2852 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2721 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3843 ; 1.451 ; 1.660 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6281 ; 0.480 ; 1.585 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 350 ; 6.645 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 17 ;15.805 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 526 ;15.160 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 415 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3352 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 656 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 603 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 25 ; 0.211 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1409 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 215 ; 0.238 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1400 ; 1.930 ; 2.359 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1400 ; 1.929 ; 2.359 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1750 ; 2.910 ; 4.225 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1751 ; 2.911 ; 4.227 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1452 ; 2.705 ; 2.684 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1449 ; 2.703 ; 2.677 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2093 ; 4.186 ; 4.775 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2088 ; 4.185 ; 4.760 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 356 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3750 4.7021 13.3336 REMARK 3 T TENSOR REMARK 3 T11: 0.0305 T22: 0.1238 REMARK 3 T33: 0.0362 T12: 0.0013 REMARK 3 T13: 0.0156 T23: 0.0274 REMARK 3 L TENSOR REMARK 3 L11: 1.4134 L22: 2.5253 REMARK 3 L33: 1.1865 L12: -0.0140 REMARK 3 L13: -0.2428 L23: -1.0056 REMARK 3 S TENSOR REMARK 3 S11: -0.0431 S12: 0.1475 S13: -0.0058 REMARK 3 S21: -0.2642 S22: -0.1630 S23: -0.1736 REMARK 3 S31: 0.0978 S32: 0.1344 S33: 0.2062 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9FHO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1292136907. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978564 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33156 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 9.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 48.25 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.08500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M CALCIUM CHLORIDE DIHYDRATE, 0.1 REMARK 280 M BIS-TRIS PH 6.5, 30% V/V POLYETHYLENE GLYCOL MONOMETHYL ETHER REMARK 280 550, MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.94700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 312 REMARK 465 GLY A 313 REMARK 465 GLU A 314 REMARK 465 HIS A 315 REMARK 465 THR A 316 REMARK 465 GLU A 317 REMARK 465 SER A 318 REMARK 465 VAL A 319 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN A 137 O HOH A 501 1.37 REMARK 500 HD21 ASN A 137 O HOH A 501 1.37 REMARK 500 ND2 ASN A 137 O HOH A 501 1.44 REMARK 500 SG CYS A 201 O HOH A 734 1.63 REMARK 500 O HOH A 633 O HOH A 764 1.95 REMARK 500 C GLU A 224 O HOH A 510 2.02 REMARK 500 OD2 ASP A 8 O HOH A 502 2.05 REMARK 500 O HOH A 504 O HOH A 708 2.07 REMARK 500 OD1 ASP A 3 O HOH A 503 2.13 REMARK 500 O LEU A 171 O HOH A 504 2.16 REMARK 500 O HOH A 643 O HOH A 704 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 504 O HOH A 703 2556 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 119 -48.98 -137.85 REMARK 500 GLU A 224 -104.94 -72.17 REMARK 500 LYS A 295 -56.67 -134.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 202 0.12 SIDE CHAIN REMARK 500 ARG A 330 0.27 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 806 DISTANCE = 6.98 ANGSTROMS DBREF1 9FHO A 1 356 UNP A0A6P6YM67_DERPT DBREF2 9FHO A A0A6P6YM67 1 356 SEQRES 1 A 356 MET VAL ASP GLN ALA VAL LEU ASP LYS LEU GLU ALA GLY SEQRES 2 A 356 TYR GLN LYS LEU GLN ALA SER ALA ASP CYS HIS SER LEU SEQRES 3 A 356 LEU LYS LYS TYR LEU THR ARG GLN VAL LEU ASP ALA CYS SEQRES 4 A 356 LYS ASN ARG LYS THR GLN MET GLY ALA THR LEU LEU ASP SEQRES 5 A 356 VAL VAL GLN SER GLY PHE GLU ASN LEU ASP SER GLY VAL SEQRES 6 A 356 GLY LEU TYR ALA PRO ASP ALA GLU SER TYR THR LEU PHE SEQRES 7 A 356 LYS GLU LEU PHE ASP PRO VAL ILE ASP ASP TYR HIS LYS SEQRES 8 A 356 GLY PHE LYS PRO THR ASP LYS HIS PRO PRO THR ASP PHE SEQRES 9 A 356 GLY ASP VAL ASN THR LEU CYS ASN VAL ASP PRO ASP ASN SEQRES 10 A 356 GLN PHE VAL ILE SER THR ARG VAL ARG CYS GLY ARG SER SEQRES 11 A 356 LEU GLN GLY TYR PRO PHE ASN PRO CYS LEU THR GLU ALA SEQRES 12 A 356 GLN TYR LYS GLU MET GLU ASP LYS VAL LYS GLY GLN LEU SEQRES 13 A 356 ASN SER PHE GLU GLY GLU LEU LYS GLY THR TYR TYR PRO SEQRES 14 A 356 LEU LEU GLY MET ASP LYS ALA THR GLN GLN GLN LEU ILE SEQRES 15 A 356 ASP ASP HIS PHE LEU PHE LYS GLU GLY ASP ARG PHE LEU SEQRES 16 A 356 GLN ALA ALA ASN ALA CYS ARG TYR TRP PRO VAL GLY ARG SEQRES 17 A 356 GLY ILE PHE HIS ASN ASP ASN LYS THR PHE LEU ILE TRP SEQRES 18 A 356 CYS ASN GLU GLU ASP HIS LEU ARG ILE ILE SER MET GLN SEQRES 19 A 356 LYS GLY GLY ASP LEU LYS GLN VAL PHE SER ARG LEU ILE SEQRES 20 A 356 ASN GLY VAL ASN HIS ILE GLU LYS LYS LEU PRO PHE SER SEQRES 21 A 356 ARG ASP ASP ARG LEU GLY PHE LEU THR PHE CYS PRO THR SEQRES 22 A 356 ASN LEU GLY THR THR ILE ARG ALA SER VAL HIS ILE LYS SEQRES 23 A 356 LEU PRO LYS LEU ALA ALA ASP ARG LYS LYS LEU GLU GLU SEQRES 24 A 356 ILE ALA GLY LYS TYR ASN LEU GLN VAL ARG GLY THR ALA SEQRES 25 A 356 GLY GLU HIS THR GLU SER VAL GLY GLY VAL TYR ASP ILE SEQRES 26 A 356 SER ASN LYS ARG ARG MET GLY LEU THR GLU TYR GLN ALA SEQRES 27 A 356 VAL LYS GLU MET GLN ASP GLY ILE LEU GLU LEU ILE LYS SEQRES 28 A 356 ILE GLU LYS SER MET HET SO4 A 401 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *306(H2 O) HELIX 1 AA1 ASP A 3 SER A 20 1 18 HELIX 2 AA2 SER A 25 LEU A 31 1 7 HELIX 3 AA3 THR A 32 LYS A 40 1 9 HELIX 4 AA4 LEU A 50 ASN A 60 1 11 HELIX 5 AA5 GLU A 73 PHE A 78 1 6 HELIX 6 AA6 PHE A 78 HIS A 90 1 13 HELIX 7 AA7 ASP A 106 LEU A 110 5 5 HELIX 8 AA8 THR A 141 ASN A 157 1 17 HELIX 9 AA9 SER A 158 PHE A 159 5 2 HELIX 10 AB1 GLU A 160 LEU A 163 5 4 HELIX 11 AB2 ASP A 174 ASP A 184 1 11 HELIX 12 AB3 ASP A 192 ALA A 198 1 7 HELIX 13 AB4 ASP A 238 LEU A 257 1 20 HELIX 14 AB5 CYS A 271 LEU A 275 5 5 HELIX 15 AB6 LEU A 287 ARG A 294 1 8 HELIX 16 AB7 LYS A 295 GLY A 302 1 8 HELIX 17 AB8 THR A 334 LYS A 354 1 21 SHEET 1 AA1 8 GLY A 165 PRO A 169 0 SHEET 2 AA1 8 GLY A 209 ASN A 213 -1 O ILE A 210 N TYR A 168 SHEET 3 AA1 8 PHE A 218 CYS A 222 -1 O CYS A 222 N GLY A 209 SHEET 4 AA1 8 LEU A 228 LYS A 235 -1 O ILE A 231 N LEU A 219 SHEET 5 AA1 8 VAL A 120 ARG A 129 -1 N VAL A 125 O SER A 232 SHEET 6 AA1 8 ARG A 280 LYS A 286 -1 O SER A 282 N ARG A 124 SHEET 7 AA1 8 VAL A 322 ASN A 327 -1 O TYR A 323 N ILE A 285 SHEET 8 AA1 8 LEU A 306 ARG A 309 -1 N ARG A 309 O ASP A 324 SHEET 1 AA2 2 ARG A 261 ASP A 262 0 SHEET 2 AA2 2 GLY A 266 PHE A 267 -1 O GLY A 266 N ASP A 262 CISPEP 1 TRP A 204 PRO A 205 0 -5.89 CRYST1 48.561 61.894 61.769 90.00 96.44 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020593 0.000000 0.002325 0.00000 SCALE2 0.000000 0.016157 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016292 0.00000 CONECT 5514 5515 5516 5517 5518 CONECT 5515 5514 CONECT 5516 5514 CONECT 5517 5514 CONECT 5518 5514 MASTER 366 0 1 17 10 0 0 6 3090 1 5 28 END