data_9FN2 # _entry.id 9FN2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.401 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9FN2 pdb_00009fn2 10.2210/pdb9fn2/pdb WWPDB D_1292139257 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2025-01-22 2 'Structure model' 2 0 2025-02-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Data collection' 4 2 'Structure model' 'Derived calculations' 5 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' pdbx_nonpoly_scheme 4 2 'Structure model' pdbx_refine_tls_group 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' pdbx_validate_close_contact 7 2 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.auth_seq_id' 2 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 3 2 'Structure model' '_pdbx_nonpoly_scheme.pdb_seq_num' 4 2 'Structure model' '_pdbx_refine_tls_group.end_auth_seq_id' 5 2 'Structure model' '_pdbx_refine_tls_group.end_label_asym_id' 6 2 'Structure model' '_pdbx_refine_tls_group.end_label_seq_id' 7 2 'Structure model' '_pdbx_refine_tls_group.selection_details' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 12 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9FN2 _pdbx_database_status.recvd_initial_deposition_date 2024-06-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category RNA-Puzzles _pdbx_database_status.pdb_format_compatible N # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Crystal structure of the alkyltransferase ribozyme SAMURI co-crystallized with ProSeDMA' _pdbx_database_related.db_id 9FN3 _pdbx_database_related.content_type unspecified # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 claudia.hoebartner@uni-wuerzburg.de Claudia Hoebartner ? 'principal investigator/group leader' 0000-0002-4548-2299 3 hermann.schindelin@virchow.uni-wuerzburg.de Hermann Schindelin ? 'principal investigator/group leader' 0000-0002-2067-3187 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chen, H.-A.' 1 0000-0002-0586-0742 'Okuda, T.' 2 0000-0002-2136-6525 'Lenz, A.-K.' 3 0009-0006-2700-2083 'Scheitl, C.P.M.' 4 0009-0000-7822-2066 'Schindelin, H.' 5 0000-0002-2067-3187 'Hoebartner, C.' 6 0000-0002-4548-2299 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure and catalytic activity of the SAM-utilizing ribozyme SAMURI.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41589-024-01808-w _citation.pdbx_database_id_PubMed 39779902 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, H.A.' 1 0000-0002-0586-0742 primary 'Okuda, T.' 2 0000-0002-2136-6525 primary 'Lenz, A.K.' 3 0009-0006-2700-2083 primary 'Scheitl, C.P.M.' 4 0009-0000-7822-2066 primary 'Schindelin, H.' 5 0000-0002-2067-3187 primary 'Hobartner, C.' 6 0000-0002-4548-2299 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn SAMURI-SAM 18810.168 2 ? ? ? 'In vitro transcription with T7 polymerase' 2 non-polymer syn 'MAGNESIUM ION' 24.305 7 ? ? ? ? 3 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 2 ? ? ? ? 4 water nat water 18.015 40 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(GDP)GAGUCAUGGCUCAGGGCUGUUCGCAGCCGCUGCAGUCAGUCGAAAGACUG(A1IEA)GACUCC' _entity_poly.pdbx_seq_one_letter_code_can GGAGUCAUGGCUCAGGGCUGUUCGCAGCCGCUGCAGUCAGUCGAAAGACUGXGACUCC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 S-ADENOSYL-L-HOMOCYSTEINE SAH 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GDP n 1 2 G n 1 3 A n 1 4 G n 1 5 U n 1 6 C n 1 7 A n 1 8 U n 1 9 G n 1 10 G n 1 11 C n 1 12 U n 1 13 C n 1 14 A n 1 15 G n 1 16 G n 1 17 G n 1 18 C n 1 19 U n 1 20 G n 1 21 U n 1 22 U n 1 23 C n 1 24 G n 1 25 C n 1 26 A n 1 27 G n 1 28 C n 1 29 C n 1 30 G n 1 31 C n 1 32 U n 1 33 G n 1 34 C n 1 35 A n 1 36 G n 1 37 U n 1 38 C n 1 39 A n 1 40 G n 1 41 U n 1 42 C n 1 43 G n 1 44 A n 1 45 A n 1 46 A n 1 47 G n 1 48 A n 1 49 C n 1 50 U n 1 51 G n 1 52 A1IEA n 1 53 G n 1 54 A n 1 55 C n 1 56 U n 1 57 C n 1 58 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 58 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 A1IEA 'RNA linking' n ;N3-methyl adenosine-5'-monophosphate ; '[(2R,3S,4R,5R)-5-(6-azanyl-3-methyl-purin-3-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate' 'C11 H17 N5 O7 P 1' 362.256 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 SAH non-polymer . S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GDP 1 1 1 GDP GDP A . n A 1 2 G 2 2 2 G G A . n A 1 3 A 3 3 3 A A A . n A 1 4 G 4 4 4 G G A . n A 1 5 U 5 5 5 U U A . n A 1 6 C 6 6 6 C C A . n A 1 7 A 7 7 7 A A A . n A 1 8 U 8 8 8 U U A . n A 1 9 G 9 9 9 G G A . n A 1 10 G 10 10 10 G G A . n A 1 11 C 11 11 11 C C A . n A 1 12 U 12 12 12 U U A . n A 1 13 C 13 13 13 C C A . n A 1 14 A 14 14 14 A A A . n A 1 15 G 15 15 15 G G A . n A 1 16 G 16 16 16 G G A . n A 1 17 G 17 17 17 G G A . n A 1 18 C 18 18 18 C C A . n A 1 19 U 19 19 19 U U A . n A 1 20 G 20 20 20 G G A . n A 1 21 U 21 21 21 U U A . n A 1 22 U 22 22 22 U U A . n A 1 23 C 23 23 23 C C A . n A 1 24 G 24 24 24 G G A . n A 1 25 C 25 25 25 C C A . n A 1 26 A 26 26 26 A A A . n A 1 27 G 27 27 27 G G A . n A 1 28 C 28 28 28 C C A . n A 1 29 C 29 29 29 C C A . n A 1 30 G 30 30 30 G G A . n A 1 31 C 31 31 31 C C A . n A 1 32 U 32 32 32 U U A . n A 1 33 G 33 33 33 G G A . n A 1 34 C 34 34 34 C C A . n A 1 35 A 35 35 35 A A A . n A 1 36 G 36 36 36 G G A . n A 1 37 U 37 37 37 U U A . n A 1 38 C 38 38 38 C C A . n A 1 39 A 39 39 39 A A A . n A 1 40 G 40 40 40 G G A . n A 1 41 U 41 41 41 U U A . n A 1 42 C 42 42 42 C C A . n A 1 43 G 43 43 43 G G A . n A 1 44 A 44 44 44 A A A . n A 1 45 A 45 45 45 A A A . n A 1 46 A 46 46 46 A A A . n A 1 47 G 47 47 47 G G A . n A 1 48 A 48 48 48 A A A . n A 1 49 C 49 49 49 C C A . n A 1 50 U 50 50 50 U U A . n A 1 51 G 51 51 51 G G A . n A 1 52 A1IEA 52 52 52 A1IEA M3A A . n A 1 53 G 53 53 53 G G A . n A 1 54 A 54 54 54 A A A . n A 1 55 C 55 55 55 C C A . n A 1 56 U 56 56 56 U U A . n A 1 57 C 57 57 57 C C A . n A 1 58 C 58 58 58 C C A . n B 1 1 GDP 1 1 1 GDP GDP B . n B 1 2 G 2 2 2 G G B . n B 1 3 A 3 3 3 A A B . n B 1 4 G 4 4 4 G G B . n B 1 5 U 5 5 5 U U B . n B 1 6 C 6 6 6 C C B . n B 1 7 A 7 7 7 A A B . n B 1 8 U 8 8 8 U U B . n B 1 9 G 9 9 9 G G B . n B 1 10 G 10 10 10 G G B . n B 1 11 C 11 11 11 C C B . n B 1 12 U 12 12 12 U U B . n B 1 13 C 13 13 13 C C B . n B 1 14 A 14 14 14 A A B . n B 1 15 G 15 15 15 G G B . n B 1 16 G 16 16 16 G G B . n B 1 17 G 17 17 17 G G B . n B 1 18 C 18 18 18 C C B . n B 1 19 U 19 19 19 U U B . n B 1 20 G 20 20 20 G G B . n B 1 21 U 21 21 21 U U B . n B 1 22 U 22 22 22 U U B . n B 1 23 C 23 23 23 C C B . n B 1 24 G 24 24 24 G G B . n B 1 25 C 25 25 25 C C B . n B 1 26 A 26 26 26 A A B . n B 1 27 G 27 27 27 G G B . n B 1 28 C 28 28 28 C C B . n B 1 29 C 29 29 29 C C B . n B 1 30 G 30 30 30 G G B . n B 1 31 C 31 31 31 C C B . n B 1 32 U 32 32 32 U U B . n B 1 33 G 33 33 33 G G B . n B 1 34 C 34 34 34 C C B . n B 1 35 A 35 35 35 A A B . n B 1 36 G 36 36 36 G G B . n B 1 37 U 37 37 37 U U B . n B 1 38 C 38 38 38 C C B . n B 1 39 A 39 39 39 A A B . n B 1 40 G 40 40 40 G G B . n B 1 41 U 41 41 41 U U B . n B 1 42 C 42 42 42 C C B . n B 1 43 G 43 43 43 G G B . n B 1 44 A 44 44 44 A A B . n B 1 45 A 45 45 45 A A B . n B 1 46 A 46 46 46 A A B . n B 1 47 G 47 47 47 G G B . n B 1 48 A 48 48 48 A A B . n B 1 49 C 49 49 49 C C B . n B 1 50 U 50 50 50 U U B . n B 1 51 G 51 51 51 G G B . n B 1 52 A1IEA 52 52 52 A1IEA M3A B . n B 1 53 G 53 53 53 G G B . n B 1 54 A 54 54 54 A A B . n B 1 55 C 55 55 55 C C B . n B 1 56 U 56 56 56 U U B . n B 1 57 C 57 57 57 C C B . n B 1 58 C 58 58 58 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 201 65 MG MG A . D 2 MG 1 202 66 MG MG A . E 2 MG 1 203 67 MG MG A . F 3 SAH 1 204 101 SAH SAH A . G 2 MG 1 205 1 MG MG A . H 2 MG 1 201 65 MG MG B . I 2 MG 1 202 66 MG MG B . J 3 SAH 1 203 101 SAH SAH B . K 2 MG 1 204 2 MG MG B . L 4 HOH 1 301 36 HOH HOH A . L 4 HOH 2 302 32 HOH HOH A . L 4 HOH 3 303 29 HOH HOH A . L 4 HOH 4 304 31 HOH HOH A . L 4 HOH 5 305 33 HOH HOH A . L 4 HOH 6 306 14 HOH HOH A . L 4 HOH 7 307 22 HOH HOH A . L 4 HOH 8 308 24 HOH HOH A . L 4 HOH 9 309 16 HOH HOH A . L 4 HOH 10 310 17 HOH HOH A . L 4 HOH 11 311 27 HOH HOH A . L 4 HOH 12 312 4 HOH HOH A . L 4 HOH 13 313 20 HOH HOH A . L 4 HOH 14 314 35 HOH HOH A . L 4 HOH 15 315 15 HOH HOH A . L 4 HOH 16 316 25 HOH HOH A . L 4 HOH 17 317 21 HOH HOH A . L 4 HOH 18 318 26 HOH HOH A . L 4 HOH 19 319 18 HOH HOH A . L 4 HOH 20 320 19 HOH HOH A . L 4 HOH 21 321 6 HOH HOH A . L 4 HOH 22 322 39 HOH HOH A . L 4 HOH 23 323 34 HOH HOH A . L 4 HOH 24 324 28 HOH HOH A . L 4 HOH 25 325 23 HOH HOH A . M 4 HOH 1 301 1 HOH HOH B . M 4 HOH 2 302 3 HOH HOH B . M 4 HOH 3 303 9 HOH HOH B . M 4 HOH 4 304 38 HOH HOH B . M 4 HOH 5 305 13 HOH HOH B . M 4 HOH 6 306 10 HOH HOH B . M 4 HOH 7 307 40 HOH HOH B . M 4 HOH 8 308 2 HOH HOH B . M 4 HOH 9 309 12 HOH HOH B . M 4 HOH 10 310 30 HOH HOH B . M 4 HOH 11 311 5 HOH HOH B . M 4 HOH 12 312 11 HOH HOH B . M 4 HOH 13 313 7 HOH HOH B . M 4 HOH 14 314 8 HOH HOH B . M 4 HOH 15 315 37 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.9.4.1 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9FN2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 75.444 _cell.length_a_esd ? _cell.length_b 75.444 _cell.length_b_esd ? _cell.length_c 73.150 _cell.length_c_esd ? _cell.volume 416354.960 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9FN2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall 'P 4c' _symmetry.space_group_name_H-M 'P 42' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9FN2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 70 _exptl_crystal.description 'Rod-shaped, 200-300 micrometer' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;50 mM MES pH6.5 100 mM NaCl 100 mM LiCl 15 mM MgCl2 39% MPD ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-11-17 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9763 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9763 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'P13 (MX1)' _diffrn_source.pdbx_synchrotron_site 'PETRA III, EMBL c/o DESY' # _reflns.B_iso_Wilson_estimate 113.0 _reflns.entry_id 9FN2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.90 _reflns.d_resolution_low 43.10 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9208 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 24.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.01 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.052 _reflns.pdbx_Rpim_I_all 0.015 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 3.08 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1471 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 14.0 _reflns_shell.pdbx_chi_squared 1.05 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.223 _reflns_shell.pdbx_Rpim_I_all 0.326 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.833 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.180 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 52.09 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9FN2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.90 _refine.ls_d_res_low 33.74 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9188 _refine.ls_number_reflns_R_free 489 _refine.ls_number_reflns_R_work 8699 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.90 _refine.ls_percent_reflns_R_free 5.32 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2056 _refine.ls_R_factor_R_free 0.2303 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2042 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.5253 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2640 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 33.74 _refine_hist.number_atoms_solvent 40 _refine_hist.number_atoms_total 2593 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2494 _refine_hist.pdbx_number_atoms_ligand 59 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0018 ? 2842 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5563 ? 4426 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0260 ? 590 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0021 ? 122 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 17.1532 ? 1402 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.90 3.32 . . 139 2895 99.97 . . . . 0.2563 . . . . . . . . . . . 0.2974 'X-RAY DIFFRACTION' 3.32 4.18 . . 177 2877 100.00 . . . . 0.1988 . . . . . . . . . . . 0.2383 'X-RAY DIFFRACTION' 4.18 33.74 . . 173 2927 99.74 . . . . 0.1760 . . . . . . . . . . . 0.1892 # _struct.entry_id 9FN2 _struct.title 'Crystal structure of the alkyltransferase ribozyme SAMURI co-crystallized with SAM' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9FN2 _struct_keywords.text 'Alkylation ribozyme, SAM, methylation, SAMURI, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 2 ? L N N 4 ? M N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9FN2 _struct_ref.pdbx_db_accession 9FN2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9FN2 A 1 ? 58 ? 9FN2 1 ? 58 ? 1 58 2 1 9FN2 B 1 ? 58 ? 9FN2 1 ? 58 ? 1 58 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,L 2 1 B,H,I,J,K,M # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GDP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? A GDP 1 A G 2 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale2 covale both ? A G 51 "O3'" ? ? ? 1_555 A A1IEA 52 P ? ? A G 51 A A1IEA 52 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale3 covale both ? A A1IEA 52 "O3'" ? ? ? 1_555 A G 53 P ? ? A A1IEA 52 A G 53 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale4 covale both ? B GDP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? B GDP 1 B G 2 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale5 covale both ? B G 51 "O3'" ? ? ? 1_555 B A1IEA 52 P ? ? B G 51 B A1IEA 52 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale6 covale both ? B A1IEA 52 "O3'" ? ? ? 1_555 B G 53 P ? ? B A1IEA 52 B G 53 1_555 ? ? ? ? ? ? ? 1.608 ? ? metalc1 metalc ? ? A A 35 OP2 ? ? ? 1_555 D MG . MG ? ? A A 35 A MG 202 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc2 metalc ? ? A G 36 OP2 ? ? ? 1_555 D MG . MG ? ? A G 36 A MG 202 1_555 ? ? ? ? ? ? ? 2.535 ? ? metalc3 metalc ? ? A G 53 OP2 ? ? ? 1_555 C MG . MG ? ? A G 53 A MG 201 1_555 ? ? ? ? ? ? ? 2.948 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 201 A HOH 307 1_555 ? ? ? ? ? ? ? 2.163 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 201 A HOH 313 1_555 ? ? ? ? ? ? ? 2.131 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 201 A HOH 317 1_555 ? ? ? ? ? ? ? 2.221 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 201 A HOH 319 1_555 ? ? ? ? ? ? ? 2.154 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 201 A HOH 320 1_555 ? ? ? ? ? ? ? 2.138 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 202 A HOH 306 1_555 ? ? ? ? ? ? ? 2.186 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 202 A HOH 309 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc11 metalc ? ? D MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 202 A HOH 310 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc12 metalc ? ? D MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 202 A HOH 315 1_555 ? ? ? ? ? ? ? 2.248 ? ? metalc13 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 203 A HOH 308 1_555 ? ? ? ? ? ? ? 2.227 ? ? metalc14 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 203 A HOH 311 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc15 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 203 A HOH 316 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc16 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 203 A HOH 318 1_555 ? ? ? ? ? ? ? 2.271 ? ? metalc17 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 203 A HOH 324 1_555 ? ? ? ? ? ? ? 2.205 ? ? metalc18 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 203 A HOH 325 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc19 metalc ? ? G MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 205 A HOH 312 1_555 ? ? ? ? ? ? ? 2.215 ? ? metalc20 metalc ? ? G MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 205 A HOH 321 1_555 ? ? ? ? ? ? ? 2.165 ? ? metalc21 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 205 B HOH 301 1_565 ? ? ? ? ? ? ? 2.128 ? ? metalc22 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 205 B HOH 302 1_565 ? ? ? ? ? ? ? 2.041 ? ? metalc23 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 205 B HOH 308 1_565 ? ? ? ? ? ? ? 2.106 ? ? metalc24 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 205 B HOH 311 1_565 ? ? ? ? ? ? ? 2.692 ? ? metalc25 metalc ? ? B C 18 O2 ? ? ? 1_555 K MG . MG ? ? B C 18 B MG 204 4_555 ? ? ? ? ? ? ? 2.770 ? ? metalc26 metalc ? ? B C 28 O2 ? ? ? 1_555 K MG . MG ? ? B C 28 B MG 204 4_555 ? ? ? ? ? ? ? 2.939 ? ? metalc27 metalc ? ? B A 35 OP2 ? ? ? 1_555 I MG . MG ? ? B A 35 B MG 202 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc28 metalc ? ? B A 46 "O2'" ? ? ? 1_555 K MG . MG ? ? B A 46 B MG 204 1_555 ? ? ? ? ? ? ? 2.675 ? ? metalc29 metalc ? ? B A1IEA 52 "O3'" ? ? ? 1_555 H MG . MG ? ? B A1IEA 52 B MG 201 1_555 ? ? ? ? ? ? ? 2.837 ? ? metalc30 metalc ? ? B G 53 OP2 ? ? ? 1_555 H MG . MG ? ? B G 53 B MG 201 1_555 ? ? ? ? ? ? ? 2.206 ? ? metalc31 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 201 B HOH 303 1_555 ? ? ? ? ? ? ? 2.143 ? ? metalc32 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 201 B HOH 306 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc33 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 201 B HOH 313 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc34 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 201 B HOH 314 1_555 ? ? ? ? ? ? ? 2.098 ? ? metalc35 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 202 B HOH 305 1_555 ? ? ? ? ? ? ? 2.142 ? ? metalc36 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 202 B HOH 309 1_555 ? ? ? ? ? ? ? 2.174 ? ? metalc37 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 202 B HOH 312 1_555 ? ? ? ? ? ? ? 2.140 ? ? hydrog1 hydrog ? ? A GDP 1 N1 ? ? ? 1_555 A C 58 O2 ? ? A GDP 1 A C 58 1_555 ? ? ? ? ? ? 'GDP-C MISPAIR' ? ? ? hydrog2 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 57 N4 ? ? A G 2 A C 57 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog3 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 58 O2 ? ? A G 2 A C 58 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog4 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 56 N3 ? ? A A 3 A U 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 56 O4 ? ? A A 3 A U 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 55 N3 ? ? A G 4 A C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 55 O2 ? ? A G 4 A C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 55 N4 ? ? A G 4 A C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 54 N1 ? ? A U 5 A A 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 54 N6 ? ? A U 5 A A 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 53 N1 ? ? A C 6 A G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 53 O6 ? ? A C 6 A G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 53 N2 ? ? A C 6 A G 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 9 N1 ? ? ? 1_555 A U 37 O2 ? ? A G 9 A U 37 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog15 hydrog ? ? A G 10 N2 ? ? ? 1_555 A U 12 O4 ? ? A G 10 A U 12 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog16 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 34 N3 ? ? A G 10 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 34 O2 ? ? A G 10 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 34 N4 ? ? A G 10 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 36 N1 ? ? A C 11 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 36 O6 ? ? A C 11 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 36 N2 ? ? A C 11 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 11 N4 ? ? ? 1_555 A A1IEA 52 N1 ? ? A C 11 A A1IEA 52 1_555 ? ? ? ? ? ? 'C-A1IEA MISPAIR' ? ? ? hydrog23 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 35 N1 ? ? A U 12 A A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 35 N6 ? ? A U 12 A A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 30 O6 ? ? A C 13 A G 30 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog26 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 33 N1 ? ? A C 13 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 33 O6 ? ? A C 13 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 33 N2 ? ? A C 13 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A A 14 N1 ? ? ? 1_555 A U 32 N3 ? ? A A 14 A U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 14 N6 ? ? ? 1_555 A U 32 O4 ? ? A A 14 A U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 31 N3 ? ? A G 15 A C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 31 O2 ? ? A G 15 A C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 31 N4 ? ? A G 15 A C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 29 N3 ? ? A G 16 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 29 O2 ? ? A G 16 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 29 N4 ? ? A G 16 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 31 N3 ? ? A G 16 A C 31 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog38 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 28 N3 ? ? A G 17 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 28 O2 ? ? A G 17 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 28 N4 ? ? A G 17 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 27 N1 ? ? A C 18 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 27 O6 ? ? A C 18 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 27 N2 ? ? A C 18 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A U 19 O2 ? ? ? 1_555 A A 26 N6 ? ? A U 19 A A 26 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog45 hydrog ? ? A G 20 N7 ? ? ? 1_555 A G 24 N1 ? ? A G 20 A G 24 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog46 hydrog ? ? A G 20 O6 ? ? ? 1_555 A G 24 N2 ? ? A G 20 A G 24 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog47 hydrog ? ? A G 30 N1 ? ? ? 1_555 A G 33 O6 ? ? A G 30 A G 33 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog48 hydrog ? ? A G 30 N2 ? ? ? 1_555 A G 33 N7 ? ? A G 30 A G 33 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog49 hydrog ? ? A G 36 O6 ? ? ? 1_555 A A1IEA 52 N6 ? ? A G 36 A A1IEA 52 1_555 ? ? ? ? ? ? 'G-A1IEA MISPAIR' ? ? ? hydrog50 hydrog ? ? A U 37 O4 ? ? ? 1_555 A A1IEA 52 N6 ? ? A U 37 A A1IEA 52 1_555 ? ? ? ? ? ? 'U-A1IEA MISPAIR' ? ? ? hydrog51 hydrog ? ? A C 38 N4 ? ? ? 1_555 A G 51 O6 ? ? A C 38 A G 51 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog52 hydrog ? ? A A 39 N1 ? ? ? 1_555 A U 50 N3 ? ? A A 39 A U 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A A 39 N6 ? ? ? 1_555 A U 50 O4 ? ? A A 39 A U 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 40 N1 ? ? ? 1_555 A C 49 N3 ? ? A G 40 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 40 N2 ? ? ? 1_555 A C 49 O2 ? ? A G 40 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 40 O6 ? ? ? 1_555 A C 49 N4 ? ? A G 40 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A U 41 N3 ? ? ? 1_555 A A 48 N1 ? ? A U 41 A A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A U 41 O4 ? ? ? 1_555 A A 48 N6 ? ? A U 41 A A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A C 42 N3 ? ? ? 1_555 A G 47 N1 ? ? A C 42 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 42 N4 ? ? ? 1_555 A G 47 O6 ? ? A C 42 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 42 O2 ? ? ? 1_555 A G 47 N2 ? ? A C 42 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 43 N2 ? ? ? 1_555 A A 46 N7 ? ? A G 43 A A 46 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog63 hydrog ? ? B GDP 1 N1 ? ? ? 1_555 B C 58 N3 ? ? B GDP 1 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B GDP 1 N2 ? ? ? 1_555 B C 58 O2 ? ? B GDP 1 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B GDP 1 O6 ? ? ? 1_555 B C 58 N4 ? ? B GDP 1 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 57 N3 ? ? B G 2 B C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 57 O2 ? ? B G 2 B C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 57 N4 ? ? B G 2 B C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 58 N3 ? ? B G 2 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 58 O2 ? ? B G 2 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 58 N4 ? ? B G 2 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B A 3 N1 ? ? ? 1_555 B U 56 N3 ? ? B A 3 B U 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B A 3 N6 ? ? ? 1_555 B U 56 O4 ? ? B A 3 B U 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 55 N4 ? ? B G 4 B C 55 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog75 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 54 N1 ? ? B U 5 B A 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 54 N6 ? ? B U 5 B A 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B C 6 O2 ? ? ? 1_555 B G 53 N2 ? ? B C 6 B G 53 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog78 hydrog ? ? B G 9 N1 ? ? ? 1_555 B U 37 O2 ? ? B G 9 B U 37 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog79 hydrog ? ? B G 10 N2 ? ? ? 1_555 B U 12 O4 ? ? B G 10 B U 12 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog80 hydrog ? ? B G 10 N1 ? ? ? 1_555 B C 34 N3 ? ? B G 10 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 34 O2 ? ? B G 10 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B G 10 O6 ? ? ? 1_555 B C 34 N4 ? ? B G 10 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B C 11 N3 ? ? ? 1_555 B G 36 N1 ? ? B C 11 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B C 11 N4 ? ? ? 1_555 B G 36 O6 ? ? B C 11 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B C 11 O2 ? ? ? 1_555 B G 36 N2 ? ? B C 11 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B C 11 N4 ? ? ? 1_555 B A1IEA 52 N1 ? ? B C 11 B A1IEA 52 1_555 ? ? ? ? ? ? 'C-A1IEA MISPAIR' ? ? ? hydrog87 hydrog ? ? B U 12 N3 ? ? ? 1_555 B A 35 N1 ? ? B U 12 B A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B U 12 O4 ? ? ? 1_555 B A 35 N6 ? ? B U 12 B A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 30 O6 ? ? B C 13 B G 30 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog90 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 33 N1 ? ? B C 13 B G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 33 O6 ? ? B C 13 B G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 33 N2 ? ? B C 13 B G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B A 14 N1 ? ? ? 1_555 B U 32 N3 ? ? B A 14 B U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B A 14 N6 ? ? ? 1_555 B U 32 O4 ? ? B A 14 B U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B G 15 N1 ? ? ? 1_555 B C 31 N3 ? ? B G 15 B C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B G 15 N2 ? ? ? 1_555 B C 31 O2 ? ? B G 15 B C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B G 15 O6 ? ? ? 1_555 B C 31 N4 ? ? B G 15 B C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B G 16 N1 ? ? ? 1_555 B C 29 N3 ? ? B G 16 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B G 16 N2 ? ? ? 1_555 B C 29 O2 ? ? B G 16 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B G 16 O6 ? ? ? 1_555 B C 29 N4 ? ? B G 16 B C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 28 N3 ? ? B G 17 B C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 28 O2 ? ? B G 17 B C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 28 N4 ? ? B G 17 B C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B C 18 N3 ? ? ? 1_555 B G 27 N1 ? ? B C 18 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B C 18 N4 ? ? ? 1_555 B G 27 O6 ? ? B C 18 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B C 18 O2 ? ? ? 1_555 B G 27 N2 ? ? B C 18 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B U 19 N3 ? ? ? 1_555 B A 26 N1 ? ? B U 19 B A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B U 19 O4 ? ? ? 1_555 B A 26 N6 ? ? B U 19 B A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B G 20 N1 ? ? ? 1_555 B C 25 N3 ? ? B G 20 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B G 20 N2 ? ? ? 1_555 B C 25 O2 ? ? B G 20 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B G 20 O6 ? ? ? 1_555 B C 25 N4 ? ? B G 20 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B U 21 O2 ? ? ? 1_555 B G 24 N1 ? ? B U 21 B G 24 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog113 hydrog ? ? B G 30 N1 ? ? ? 1_555 B G 33 O6 ? ? B G 30 B G 33 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog114 hydrog ? ? B G 30 N2 ? ? ? 1_555 B G 33 N7 ? ? B G 30 B G 33 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog115 hydrog ? ? B G 36 O6 ? ? ? 1_555 B A1IEA 52 N6 ? ? B G 36 B A1IEA 52 1_555 ? ? ? ? ? ? 'G-A1IEA MISPAIR' ? ? ? hydrog116 hydrog ? ? B U 37 O4 ? ? ? 1_555 B A1IEA 52 N6 ? ? B U 37 B A1IEA 52 1_555 ? ? ? ? ? ? 'U-A1IEA MISPAIR' ? ? ? hydrog117 hydrog ? ? B C 38 N3 ? ? ? 1_555 B G 51 N1 ? ? B C 38 B G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? B C 38 N4 ? ? ? 1_555 B G 51 O6 ? ? B C 38 B G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B C 38 O2 ? ? ? 1_555 B G 51 N2 ? ? B C 38 B G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? B A 39 N1 ? ? ? 1_555 B U 50 N3 ? ? B A 39 B U 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? B A 39 N6 ? ? ? 1_555 B U 50 O4 ? ? B A 39 B U 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? B G 40 N1 ? ? ? 1_555 B C 49 N3 ? ? B G 40 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B G 40 N2 ? ? ? 1_555 B C 49 O2 ? ? B G 40 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B G 40 O6 ? ? ? 1_555 B C 49 N4 ? ? B G 40 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B U 41 N3 ? ? ? 1_555 B A 48 N1 ? ? B U 41 B A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B U 41 O4 ? ? ? 1_555 B A 48 N6 ? ? B U 41 B A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B C 42 N3 ? ? ? 1_555 B G 47 N1 ? ? B C 42 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B C 42 N4 ? ? ? 1_555 B G 47 O6 ? ? B C 42 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B C 42 O2 ? ? ? 1_555 B G 47 N2 ? ? B C 42 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B G 43 N2 ? ? ? 1_555 B A 46 N7 ? ? B G 43 B A 46 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A A 35 ? A A 35 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 OP2 ? A G 36 ? A G 36 ? 1_555 124.4 ? 2 OP2 ? A A 35 ? A A 35 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 306 ? 1_555 134.2 ? 3 OP2 ? A G 36 ? A G 36 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 306 ? 1_555 90.8 ? 4 OP2 ? A A 35 ? A A 35 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 309 ? 1_555 75.9 ? 5 OP2 ? A G 36 ? A G 36 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 309 ? 1_555 135.5 ? 6 O ? L HOH . ? A HOH 306 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 309 ? 1_555 100.2 ? 7 OP2 ? A A 35 ? A A 35 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 310 ? 1_555 77.0 ? 8 OP2 ? A G 36 ? A G 36 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 310 ? 1_555 69.9 ? 9 O ? L HOH . ? A HOH 306 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 310 ? 1_555 148.2 ? 10 O ? L HOH . ? A HOH 309 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 310 ? 1_555 79.2 ? 11 OP2 ? A A 35 ? A A 35 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 315 ? 1_555 130.9 ? 12 OP2 ? A G 36 ? A G 36 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 315 ? 1_555 82.6 ? 13 O ? L HOH . ? A HOH 306 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 315 ? 1_555 76.4 ? 14 O ? L HOH . ? A HOH 309 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 315 ? 1_555 59.1 ? 15 O ? L HOH . ? A HOH 310 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? L HOH . ? A HOH 315 ? 1_555 76.3 ? 16 OP2 ? A G 53 ? A G 53 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 307 ? 1_555 60.7 ? 17 OP2 ? A G 53 ? A G 53 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 313 ? 1_555 72.2 ? 18 O ? L HOH . ? A HOH 307 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 313 ? 1_555 67.7 ? 19 OP2 ? A G 53 ? A G 53 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 317 ? 1_555 128.2 ? 20 O ? L HOH . ? A HOH 307 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 317 ? 1_555 132.2 ? 21 O ? L HOH . ? A HOH 313 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 317 ? 1_555 72.3 ? 22 OP2 ? A G 53 ? A G 53 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 319 ? 1_555 125.0 ? 23 O ? L HOH . ? A HOH 307 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 319 ? 1_555 67.9 ? 24 O ? L HOH . ? A HOH 313 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 319 ? 1_555 71.4 ? 25 O ? L HOH . ? A HOH 317 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 319 ? 1_555 75.7 ? 26 OP2 ? A G 53 ? A G 53 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 320 ? 1_555 92.5 ? 27 O ? L HOH . ? A HOH 307 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 320 ? 1_555 71.4 ? 28 O ? L HOH . ? A HOH 313 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 320 ? 1_555 138.7 ? 29 O ? L HOH . ? A HOH 317 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 320 ? 1_555 138.3 ? 30 O ? L HOH . ? A HOH 319 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? L HOH . ? A HOH 320 ? 1_555 88.6 ? 31 O ? L HOH . ? A HOH 308 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 311 ? 1_555 85.3 ? 32 O ? L HOH . ? A HOH 308 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 316 ? 1_555 83.7 ? 33 O ? L HOH . ? A HOH 311 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 316 ? 1_555 70.4 ? 34 O ? L HOH . ? A HOH 308 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 318 ? 1_555 124.0 ? 35 O ? L HOH . ? A HOH 311 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 318 ? 1_555 81.7 ? 36 O ? L HOH . ? A HOH 316 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 318 ? 1_555 139.1 ? 37 O ? L HOH . ? A HOH 308 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 324 ? 1_555 153.3 ? 38 O ? L HOH . ? A HOH 311 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 324 ? 1_555 99.1 ? 39 O ? L HOH . ? A HOH 316 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 324 ? 1_555 73.3 ? 40 O ? L HOH . ? A HOH 318 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 324 ? 1_555 82.6 ? 41 O ? L HOH . ? A HOH 308 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 325 ? 1_555 84.1 ? 42 O ? L HOH . ? A HOH 311 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 325 ? 1_555 166.9 ? 43 O ? L HOH . ? A HOH 316 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 325 ? 1_555 115.8 ? 44 O ? L HOH . ? A HOH 318 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 325 ? 1_555 98.0 ? 45 O ? L HOH . ? A HOH 324 ? 1_555 MG ? E MG . ? A MG 203 ? 1_555 O ? L HOH . ? A HOH 325 ? 1_555 93.8 ? 46 O ? L HOH . ? A HOH 312 ? 1_555 MG ? G MG . ? A MG 205 ? 1_555 O ? L HOH . ? A HOH 321 ? 1_555 87.7 ? 47 O ? L HOH . ? A HOH 312 ? 1_555 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 301 ? 1_565 108.1 ? 48 O ? L HOH . ? A HOH 321 ? 1_555 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 301 ? 1_565 153.2 ? 49 O ? L HOH . ? A HOH 312 ? 1_555 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 302 ? 1_565 96.8 ? 50 O ? L HOH . ? A HOH 321 ? 1_555 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 302 ? 1_565 78.7 ? 51 O ? M HOH . ? B HOH 301 ? 1_565 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 302 ? 1_565 119.2 ? 52 O ? L HOH . ? A HOH 312 ? 1_555 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 308 ? 1_565 91.0 ? 53 O ? L HOH . ? A HOH 321 ? 1_555 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 308 ? 1_565 76.9 ? 54 O ? M HOH . ? B HOH 301 ? 1_565 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 308 ? 1_565 81.2 ? 55 O ? M HOH . ? B HOH 302 ? 1_565 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 308 ? 1_565 154.0 ? 56 O ? L HOH . ? A HOH 312 ? 1_555 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 311 ? 1_565 163.3 ? 57 O ? L HOH . ? A HOH 321 ? 1_555 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 311 ? 1_565 76.1 ? 58 O ? M HOH . ? B HOH 301 ? 1_565 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 311 ? 1_565 85.8 ? 59 O ? M HOH . ? B HOH 302 ? 1_565 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 311 ? 1_565 83.8 ? 60 O ? M HOH . ? B HOH 308 ? 1_565 MG ? G MG . ? A MG 205 ? 1_555 O ? M HOH . ? B HOH 311 ? 1_565 81.8 ? 61 O2 ? B C 18 ? B C 18 ? 1_555 MG ? K MG . ? B MG 204 ? 4_555 O2 ? B C 28 ? B C 28 ? 1_555 63.6 ? 62 O2 ? B C 18 ? B C 18 ? 1_555 MG ? K MG . ? B MG 204 ? 4_555 "O2'" ? B A 46 ? B A 46 ? 1_555 64.6 ? 63 O2 ? B C 28 ? B C 28 ? 1_555 MG ? K MG . ? B MG 204 ? 4_555 "O2'" ? B A 46 ? B A 46 ? 1_555 5.0 ? 64 OP2 ? B A 35 ? B A 35 ? 1_555 MG ? I MG . ? B MG 202 ? 1_555 O ? M HOH . ? B HOH 305 ? 1_555 71.4 ? 65 OP2 ? B A 35 ? B A 35 ? 1_555 MG ? I MG . ? B MG 202 ? 1_555 O ? M HOH . ? B HOH 309 ? 1_555 109.2 ? 66 O ? M HOH . ? B HOH 305 ? 1_555 MG ? I MG . ? B MG 202 ? 1_555 O ? M HOH . ? B HOH 309 ? 1_555 131.0 ? 67 OP2 ? B A 35 ? B A 35 ? 1_555 MG ? I MG . ? B MG 202 ? 1_555 O ? M HOH . ? B HOH 312 ? 1_555 150.9 ? 68 O ? M HOH . ? B HOH 305 ? 1_555 MG ? I MG . ? B MG 202 ? 1_555 O ? M HOH . ? B HOH 312 ? 1_555 80.1 ? 69 O ? M HOH . ? B HOH 309 ? 1_555 MG ? I MG . ? B MG 202 ? 1_555 O ? M HOH . ? B HOH 312 ? 1_555 84.7 ? 70 "O3'" ? B A1IEA 52 ? B A1IEA 52 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 OP2 ? B G 53 ? B G 53 ? 1_555 57.8 ? 71 "O3'" ? B A1IEA 52 ? B A1IEA 52 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 303 ? 1_555 118.0 ? 72 OP2 ? B G 53 ? B G 53 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 303 ? 1_555 162.4 ? 73 "O3'" ? B A1IEA 52 ? B A1IEA 52 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 306 ? 1_555 102.2 ? 74 OP2 ? B G 53 ? B G 53 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 306 ? 1_555 69.9 ? 75 O ? M HOH . ? B HOH 303 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 306 ? 1_555 96.0 ? 76 "O3'" ? B A1IEA 52 ? B A1IEA 52 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 313 ? 1_555 149.1 ? 77 OP2 ? B G 53 ? B G 53 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 313 ? 1_555 91.7 ? 78 O ? M HOH . ? B HOH 303 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 313 ? 1_555 92.5 ? 79 O ? M HOH . ? B HOH 306 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 313 ? 1_555 67.6 ? 80 "O3'" ? B A1IEA 52 ? B A1IEA 52 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 314 ? 1_555 85.7 ? 81 OP2 ? B G 53 ? B G 53 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 314 ? 1_555 99.8 ? 82 O ? M HOH . ? B HOH 303 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 314 ? 1_555 96.8 ? 83 O ? M HOH . ? B HOH 306 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 314 ? 1_555 159.5 ? 84 O ? M HOH . ? B HOH 313 ? 1_555 MG ? H MG . ? B MG 201 ? 1_555 O ? M HOH . ? B HOH 314 ? 1_555 96.0 ? # _pdbx_entry_details.entry_id 9FN2 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 N7 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 G _pdbx_validate_close_contact.auth_seq_id_1 20 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x,z+1/2 3 y,-x,z+1/2 4 -x,-y,z # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 28.8630754098 27.4250949856 -1.73462077171 0.192000473159 ? -0.0383302967179 ? 0.234224650911 ? 0.256200897086 ? -0.0243526681315 ? 0.300629511635 ? 0.927295245457 ? -0.325750259007 ? -0.307532369105 ? 0.603656117003 ? 0.323052646997 ? 1.31136590665 ? -0.162751841779 ? 0.0942984560015 ? -0.0654268473837 ? 0.113860288444 ? -0.159645913207 ? -0.0283778787231 ? -0.0182513617089 ? 0.269025713524 ? -0.717875536174 ? 2 'X-RAY DIFFRACTION' ? refined 12.3271176911 3.5575122427 0.372259185457 0.300802683763 ? 0.0453419468463 ? -0.0230515399123 ? 0.0856511959162 ? -0.0259974371179 ? 0.231471105359 ? 0.593254979171 ? -0.110024754924 ? -0.00551991276609 ? 0.810566532893 ? -0.448869898663 ? 0.375853441123 ? 0.180256121641 ? 0.0308338504407 ? 0.129640572168 ? 0.145928051965 ? -0.0965751976325 ? 0.0163372937058 ? -0.135728576659 ? -0.081485886041 ? -0.0295933988679 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? A 1 ? A ? A 58 ? ? ;(chain 'A' and resid 1 through 58) ; 2 'X-RAY DIFFRACTION' 2 B ? B 1 ? B ? B 58 ? ? ;(chain 'B' and resid 1 through 58) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 A1IEA C4 C Y N 38 A1IEA C5 C Y N 39 A1IEA C6 C Y N 40 A1IEA N1 N Y N 41 A1IEA C8 C Y N 42 A1IEA N3 N Y N 43 A1IEA C2 C Y N 44 A1IEA N6 N N N 45 A1IEA "C1'" C N R 46 A1IEA C1P C N N 47 A1IEA "C2'" C N R 48 A1IEA "C3'" C N S 49 A1IEA "C4'" C N R 50 A1IEA "C5'" C N N 51 A1IEA N7 N Y N 52 A1IEA N9 N Y N 53 A1IEA "O2'" O N N 54 A1IEA "O3'" O N N 55 A1IEA "O4'" O N N 56 A1IEA "O5'" O N N 57 A1IEA OP3 O N N 58 A1IEA OP2 O N N 59 A1IEA P P N N 60 A1IEA H8 H N N 61 A1IEA H2 H N N 62 A1IEA H61 H N N 63 A1IEA H62 H N N 64 A1IEA "H1'" H N N 65 A1IEA H1P3 H N N 66 A1IEA H1 H N N 67 A1IEA H3 H N N 68 A1IEA "H2'" H N N 69 A1IEA "H3'" H N N 70 A1IEA "H4'" H N N 71 A1IEA "H5''" H N N 72 A1IEA "H5'" H N N 73 A1IEA "HO2'" H N N 74 A1IEA "HO3'" H N N 75 A1IEA HOP3 H N N 76 A1IEA HOP2 H N N 77 A1IEA OP1 O N N 78 C OP3 O N N 79 C P P N N 80 C OP1 O N N 81 C OP2 O N N 82 C "O5'" O N N 83 C "C5'" C N N 84 C "C4'" C N R 85 C "O4'" O N N 86 C "C3'" C N S 87 C "O3'" O N N 88 C "C2'" C N R 89 C "O2'" O N N 90 C "C1'" C N R 91 C N1 N N N 92 C C2 C N N 93 C O2 O N N 94 C N3 N N N 95 C C4 C N N 96 C N4 N N N 97 C C5 C N N 98 C C6 C N N 99 C HOP3 H N N 100 C HOP2 H N N 101 C "H5'" H N N 102 C "H5''" H N N 103 C "H4'" H N N 104 C "H3'" H N N 105 C "HO3'" H N N 106 C "H2'" H N N 107 C "HO2'" H N N 108 C "H1'" H N N 109 C H41 H N N 110 C H42 H N N 111 C H5 H N N 112 C H6 H N N 113 G OP3 O N N 114 G P P N N 115 G OP1 O N N 116 G OP2 O N N 117 G "O5'" O N N 118 G "C5'" C N N 119 G "C4'" C N R 120 G "O4'" O N N 121 G "C3'" C N S 122 G "O3'" O N N 123 G "C2'" C N R 124 G "O2'" O N N 125 G "C1'" C N R 126 G N9 N Y N 127 G C8 C Y N 128 G N7 N Y N 129 G C5 C Y N 130 G C6 C N N 131 G O6 O N N 132 G N1 N N N 133 G C2 C N N 134 G N2 N N N 135 G N3 N N N 136 G C4 C Y N 137 G HOP3 H N N 138 G HOP2 H N N 139 G "H5'" H N N 140 G "H5''" H N N 141 G "H4'" H N N 142 G "H3'" H N N 143 G "HO3'" H N N 144 G "H2'" H N N 145 G "HO2'" H N N 146 G "H1'" H N N 147 G H8 H N N 148 G H1 H N N 149 G H21 H N N 150 G H22 H N N 151 GDP PB P N N 152 GDP O1B O N N 153 GDP O2B O N N 154 GDP O3B O N N 155 GDP O3A O N N 156 GDP PA P N N 157 GDP O1A O N N 158 GDP O2A O N N 159 GDP "O5'" O N N 160 GDP "C5'" C N N 161 GDP "C4'" C N R 162 GDP "O4'" O N N 163 GDP "C3'" C N S 164 GDP "O3'" O N N 165 GDP "C2'" C N R 166 GDP "O2'" O N N 167 GDP "C1'" C N R 168 GDP N9 N Y N 169 GDP C8 C Y N 170 GDP N7 N Y N 171 GDP C5 C Y N 172 GDP C6 C N N 173 GDP O6 O N N 174 GDP N1 N N N 175 GDP C2 C N N 176 GDP N2 N N N 177 GDP N3 N N N 178 GDP C4 C Y N 179 GDP HOB2 H N N 180 GDP HOB3 H N N 181 GDP HOA2 H N N 182 GDP "H5'" H N N 183 GDP "H5''" H N N 184 GDP "H4'" H N N 185 GDP "H3'" H N N 186 GDP "HO3'" H N N 187 GDP "H2'" H N N 188 GDP "HO2'" H N N 189 GDP "H1'" H N N 190 GDP H8 H N N 191 GDP HN1 H N N 192 GDP HN21 H N N 193 GDP HN22 H N N 194 HOH O O N N 195 HOH H1 H N N 196 HOH H2 H N N 197 MG MG MG N N 198 SAH N N N N 199 SAH CA C N S 200 SAH CB C N N 201 SAH CG C N N 202 SAH SD S N N 203 SAH C C N N 204 SAH O O N N 205 SAH OXT O N N 206 SAH "C5'" C N N 207 SAH "C4'" C N S 208 SAH "O4'" O N N 209 SAH "C3'" C N S 210 SAH "O3'" O N N 211 SAH "C2'" C N R 212 SAH "O2'" O N N 213 SAH "C1'" C N R 214 SAH N9 N Y N 215 SAH C8 C Y N 216 SAH N7 N Y N 217 SAH C5 C Y N 218 SAH C6 C Y N 219 SAH N6 N N N 220 SAH N1 N Y N 221 SAH C2 C Y N 222 SAH N3 N Y N 223 SAH C4 C Y N 224 SAH HN1 H N N 225 SAH HN2 H N N 226 SAH HA H N N 227 SAH HB1 H N N 228 SAH HB2 H N N 229 SAH HG1 H N N 230 SAH HG2 H N N 231 SAH HXT H N N 232 SAH "H5'1" H N N 233 SAH "H5'2" H N N 234 SAH "H4'" H N N 235 SAH "H3'" H N N 236 SAH "HO3'" H N N 237 SAH "H2'" H N N 238 SAH "HO2'" H N N 239 SAH "H1'" H N N 240 SAH H8 H N N 241 SAH HN61 H N N 242 SAH HN62 H N N 243 SAH H2 H N N 244 U OP3 O N N 245 U P P N N 246 U OP1 O N N 247 U OP2 O N N 248 U "O5'" O N N 249 U "C5'" C N N 250 U "C4'" C N R 251 U "O4'" O N N 252 U "C3'" C N S 253 U "O3'" O N N 254 U "C2'" C N R 255 U "O2'" O N N 256 U "C1'" C N R 257 U N1 N N N 258 U C2 C N N 259 U O2 O N N 260 U N3 N N N 261 U C4 C N N 262 U O4 O N N 263 U C5 C N N 264 U C6 C N N 265 U HOP3 H N N 266 U HOP2 H N N 267 U "H5'" H N N 268 U "H5''" H N N 269 U "H4'" H N N 270 U "H3'" H N N 271 U "HO3'" H N N 272 U "H2'" H N N 273 U "HO2'" H N N 274 U "H1'" H N N 275 U H3 H N N 276 U H5 H N N 277 U H6 H N N 278 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 A1IEA N6 C6 sing N N 40 A1IEA C6 N1 doub Y N 41 A1IEA C6 C5 sing Y N 42 A1IEA N7 C5 sing Y N 43 A1IEA N7 C8 doub Y N 44 A1IEA N1 C2 sing Y N 45 A1IEA C5 C4 doub Y N 46 A1IEA C8 N9 sing Y N 47 A1IEA C2 N3 doub Y N 48 A1IEA C4 N9 sing Y N 49 A1IEA C4 N3 sing Y N 50 A1IEA OP3 P sing N N 51 A1IEA N9 "C1'" sing N N 52 A1IEA N3 C1P sing N N 53 A1IEA P "O5'" sing N N 54 A1IEA P OP2 sing N N 55 A1IEA "C1'" "O4'" sing N N 56 A1IEA "C1'" "C2'" sing N N 57 A1IEA "O4'" "C4'" sing N N 58 A1IEA "C5'" "O5'" sing N N 59 A1IEA "C5'" "C4'" sing N N 60 A1IEA "C2'" "O2'" sing N N 61 A1IEA "C2'" "C3'" sing N N 62 A1IEA "C4'" "C3'" sing N N 63 A1IEA "C3'" "O3'" sing N N 64 A1IEA C8 H8 sing N N 65 A1IEA C2 H2 sing N N 66 A1IEA N6 H61 sing N N 67 A1IEA N6 H62 sing N N 68 A1IEA "C1'" "H1'" sing N N 69 A1IEA C1P H1P3 sing N N 70 A1IEA C1P H1 sing N N 71 A1IEA C1P H3 sing N N 72 A1IEA "C2'" "H2'" sing N N 73 A1IEA "C3'" "H3'" sing N N 74 A1IEA "C4'" "H4'" sing N N 75 A1IEA "C5'" "H5''" sing N N 76 A1IEA "C5'" "H5'" sing N N 77 A1IEA "O2'" "HO2'" sing N N 78 A1IEA "O3'" "HO3'" sing N N 79 A1IEA OP3 HOP3 sing N N 80 A1IEA OP2 HOP2 sing N N 81 A1IEA P OP1 doub N N 82 C OP3 P sing N N 83 C OP3 HOP3 sing N N 84 C P OP1 doub N N 85 C P OP2 sing N N 86 C P "O5'" sing N N 87 C OP2 HOP2 sing N N 88 C "O5'" "C5'" sing N N 89 C "C5'" "C4'" sing N N 90 C "C5'" "H5'" sing N N 91 C "C5'" "H5''" sing N N 92 C "C4'" "O4'" sing N N 93 C "C4'" "C3'" sing N N 94 C "C4'" "H4'" sing N N 95 C "O4'" "C1'" sing N N 96 C "C3'" "O3'" sing N N 97 C "C3'" "C2'" sing N N 98 C "C3'" "H3'" sing N N 99 C "O3'" "HO3'" sing N N 100 C "C2'" "O2'" sing N N 101 C "C2'" "C1'" sing N N 102 C "C2'" "H2'" sing N N 103 C "O2'" "HO2'" sing N N 104 C "C1'" N1 sing N N 105 C "C1'" "H1'" sing N N 106 C N1 C2 sing N N 107 C N1 C6 sing N N 108 C C2 O2 doub N N 109 C C2 N3 sing N N 110 C N3 C4 doub N N 111 C C4 N4 sing N N 112 C C4 C5 sing N N 113 C N4 H41 sing N N 114 C N4 H42 sing N N 115 C C5 C6 doub N N 116 C C5 H5 sing N N 117 C C6 H6 sing N N 118 G OP3 P sing N N 119 G OP3 HOP3 sing N N 120 G P OP1 doub N N 121 G P OP2 sing N N 122 G P "O5'" sing N N 123 G OP2 HOP2 sing N N 124 G "O5'" "C5'" sing N N 125 G "C5'" "C4'" sing N N 126 G "C5'" "H5'" sing N N 127 G "C5'" "H5''" sing N N 128 G "C4'" "O4'" sing N N 129 G "C4'" "C3'" sing N N 130 G "C4'" "H4'" sing N N 131 G "O4'" "C1'" sing N N 132 G "C3'" "O3'" sing N N 133 G "C3'" "C2'" sing N N 134 G "C3'" "H3'" sing N N 135 G "O3'" "HO3'" sing N N 136 G "C2'" "O2'" sing N N 137 G "C2'" "C1'" sing N N 138 G "C2'" "H2'" sing N N 139 G "O2'" "HO2'" sing N N 140 G "C1'" N9 sing N N 141 G "C1'" "H1'" sing N N 142 G N9 C8 sing Y N 143 G N9 C4 sing Y N 144 G C8 N7 doub Y N 145 G C8 H8 sing N N 146 G N7 C5 sing Y N 147 G C5 C6 sing N N 148 G C5 C4 doub Y N 149 G C6 O6 doub N N 150 G C6 N1 sing N N 151 G N1 C2 sing N N 152 G N1 H1 sing N N 153 G C2 N2 sing N N 154 G C2 N3 doub N N 155 G N2 H21 sing N N 156 G N2 H22 sing N N 157 G N3 C4 sing N N 158 GDP PB O1B doub N N 159 GDP PB O2B sing N N 160 GDP PB O3B sing N N 161 GDP PB O3A sing N N 162 GDP O2B HOB2 sing N N 163 GDP O3B HOB3 sing N N 164 GDP O3A PA sing N N 165 GDP PA O1A doub N N 166 GDP PA O2A sing N N 167 GDP PA "O5'" sing N N 168 GDP O2A HOA2 sing N N 169 GDP "O5'" "C5'" sing N N 170 GDP "C5'" "C4'" sing N N 171 GDP "C5'" "H5'" sing N N 172 GDP "C5'" "H5''" sing N N 173 GDP "C4'" "O4'" sing N N 174 GDP "C4'" "C3'" sing N N 175 GDP "C4'" "H4'" sing N N 176 GDP "O4'" "C1'" sing N N 177 GDP "C3'" "O3'" sing N N 178 GDP "C3'" "C2'" sing N N 179 GDP "C3'" "H3'" sing N N 180 GDP "O3'" "HO3'" sing N N 181 GDP "C2'" "O2'" sing N N 182 GDP "C2'" "C1'" sing N N 183 GDP "C2'" "H2'" sing N N 184 GDP "O2'" "HO2'" sing N N 185 GDP "C1'" N9 sing N N 186 GDP "C1'" "H1'" sing N N 187 GDP N9 C8 sing Y N 188 GDP N9 C4 sing Y N 189 GDP C8 N7 doub Y N 190 GDP C8 H8 sing N N 191 GDP N7 C5 sing Y N 192 GDP C5 C6 sing N N 193 GDP C5 C4 doub Y N 194 GDP C6 O6 doub N N 195 GDP C6 N1 sing N N 196 GDP N1 C2 sing N N 197 GDP N1 HN1 sing N N 198 GDP C2 N2 sing N N 199 GDP C2 N3 doub N N 200 GDP N2 HN21 sing N N 201 GDP N2 HN22 sing N N 202 GDP N3 C4 sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 SAH N CA sing N N 206 SAH N HN1 sing N N 207 SAH N HN2 sing N N 208 SAH CA CB sing N N 209 SAH CA C sing N N 210 SAH CA HA sing N N 211 SAH CB CG sing N N 212 SAH CB HB1 sing N N 213 SAH CB HB2 sing N N 214 SAH CG SD sing N N 215 SAH CG HG1 sing N N 216 SAH CG HG2 sing N N 217 SAH SD "C5'" sing N N 218 SAH C O doub N N 219 SAH C OXT sing N N 220 SAH OXT HXT sing N N 221 SAH "C5'" "C4'" sing N N 222 SAH "C5'" "H5'1" sing N N 223 SAH "C5'" "H5'2" sing N N 224 SAH "C4'" "O4'" sing N N 225 SAH "C4'" "C3'" sing N N 226 SAH "C4'" "H4'" sing N N 227 SAH "O4'" "C1'" sing N N 228 SAH "C3'" "O3'" sing N N 229 SAH "C3'" "C2'" sing N N 230 SAH "C3'" "H3'" sing N N 231 SAH "O3'" "HO3'" sing N N 232 SAH "C2'" "O2'" sing N N 233 SAH "C2'" "C1'" sing N N 234 SAH "C2'" "H2'" sing N N 235 SAH "O2'" "HO2'" sing N N 236 SAH "C1'" N9 sing N N 237 SAH "C1'" "H1'" sing N N 238 SAH N9 C8 sing Y N 239 SAH N9 C4 sing Y N 240 SAH C8 N7 doub Y N 241 SAH C8 H8 sing N N 242 SAH N7 C5 sing Y N 243 SAH C5 C6 sing Y N 244 SAH C5 C4 doub Y N 245 SAH C6 N6 sing N N 246 SAH C6 N1 doub Y N 247 SAH N6 HN61 sing N N 248 SAH N6 HN62 sing N N 249 SAH N1 C2 sing Y N 250 SAH C2 N3 doub Y N 251 SAH C2 H2 sing N N 252 SAH N3 C4 sing Y N 253 U OP3 P sing N N 254 U OP3 HOP3 sing N N 255 U P OP1 doub N N 256 U P OP2 sing N N 257 U P "O5'" sing N N 258 U OP2 HOP2 sing N N 259 U "O5'" "C5'" sing N N 260 U "C5'" "C4'" sing N N 261 U "C5'" "H5'" sing N N 262 U "C5'" "H5''" sing N N 263 U "C4'" "O4'" sing N N 264 U "C4'" "C3'" sing N N 265 U "C4'" "H4'" sing N N 266 U "O4'" "C1'" sing N N 267 U "C3'" "O3'" sing N N 268 U "C3'" "C2'" sing N N 269 U "C3'" "H3'" sing N N 270 U "O3'" "HO3'" sing N N 271 U "C2'" "O2'" sing N N 272 U "C2'" "C1'" sing N N 273 U "C2'" "H2'" sing N N 274 U "O2'" "HO2'" sing N N 275 U "C1'" N1 sing N N 276 U "C1'" "H1'" sing N N 277 U N1 C2 sing N N 278 U N1 C6 sing N N 279 U C2 O2 doub N N 280 U C2 N3 sing N N 281 U N3 C4 sing N N 282 U N3 H3 sing N N 283 U C4 O4 doub N N 284 U C4 C5 sing N N 285 U C5 C6 doub N N 286 U C5 H5 sing N N 287 U C6 H6 sing N N 288 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9FN2 'double helix' 9FN2 'a-form double helix' 9FN2 'hairpin loop' 9FN2 tetraloop 9FN2 'bulge loop' 9FN2 'mismatched base pair' 9FN2 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 53 1_555 A C 6 1_555 0.494 0.051 -0.367 -17.214 -11.179 0.264 1 A_G53:C6_A A 53 ? A 6 ? 19 1 1 A A 54 1_555 A U 5 1_555 1.227 0.007 -1.077 -22.039 -31.251 1.769 2 A_A54:U5_A A 54 ? A 5 ? 20 1 1 A C 55 1_555 A G 4 1_555 -0.201 0.087 -0.633 11.740 -25.490 10.359 3 A_C55:G4_A A 55 ? A 4 ? 19 1 1 A U 56 1_555 A A 3 1_555 0.523 0.128 0.165 -8.213 7.843 -3.830 4 A_U56:A3_A A 56 ? A 3 ? 20 1 1 A C 57 1_555 A G 2 1_555 -1.170 0.696 -1.040 4.922 -2.461 -16.789 5 A_C57:G2_A A 57 ? A 2 ? ? ? 1 A C 58 1_555 A GDP 1 1_555 2.148 -0.434 -0.944 17.154 -10.239 -10.688 6 A_C58:GDP1_A A 58 ? A 1 ? ? 1 1 B GDP 1 1_555 B C 58 1_555 -1.312 0.012 -1.089 -17.970 -15.033 9.195 7 B_GDP1:C58_B B 1 ? B 58 ? 19 1 1 B G 2 1_555 B C 57 1_555 0.654 0.402 -0.864 -16.766 -24.873 -2.499 8 B_G2:C57_B B 2 ? B 57 ? 19 1 1 B A 3 1_555 B U 56 1_555 1.239 0.373 0.066 -0.778 -14.485 -5.372 9 B_A3:U56_B B 3 ? B 56 ? 20 1 1 B G 4 1_555 B C 55 1_555 0.721 -0.095 -1.727 -22.348 -26.822 -12.280 10 B_G4:C55_B B 4 ? B 55 ? ? 1 1 B U 5 1_555 B A 54 1_555 0.251 0.104 -1.034 6.484 -19.012 3.306 11 B_U5:A54_B B 5 ? B 54 ? 20 1 1 B C 6 1_555 B G 53 1_555 1.932 0.104 -0.049 -5.463 4.490 13.518 12 B_C6:G53_B B 6 ? B 53 ? ? 1 1 A G 10 1_555 A C 34 1_555 -0.464 -0.537 -0.651 -10.850 15.095 -12.581 13 A_G10:C34_A A 10 ? A 34 ? 19 1 1 A C 13 1_555 A G 33 1_555 -0.427 0.016 -0.360 20.340 -12.410 -5.506 14 A_C13:G33_A A 13 ? A 33 ? 19 1 1 A A 14 1_555 A U 32 1_555 0.496 -0.201 -0.318 0.803 -1.765 7.970 15 A_A14:U32_A A 14 ? A 32 ? 20 1 1 A G 15 1_555 A C 31 1_555 0.996 -0.022 -1.040 -23.318 -10.202 -7.971 16 A_G15:C31_A A 15 ? A 31 ? 19 1 1 A G 16 1_555 A C 29 1_555 0.128 -0.069 0.038 -1.963 -10.362 -4.469 17 A_G16:C29_A A 16 ? A 29 ? 19 1 1 A G 17 1_555 A C 28 1_555 0.002 -0.038 -0.466 -9.559 -13.733 -2.898 18 A_G17:C28_A A 17 ? A 28 ? 19 1 1 A C 18 1_555 A G 27 1_555 -0.240 -0.167 -0.032 0.677 -13.604 -1.483 19 A_C18:G27_A A 18 ? A 27 ? 19 1 1 A U 19 1_555 A A 26 1_555 4.567 -0.727 -0.570 -5.956 -14.912 0.548 20 A_U19:A26_A A 19 ? A 26 ? ? ? 1 A G 20 1_555 A G 24 1_555 -5.806 -0.344 0.275 -10.946 8.616 -119.942 21 A_G20:G24_A A 20 ? A 24 ? 7 4 1 A A 35 1_555 A U 12 1_555 -0.646 -0.154 0.698 10.383 16.439 -0.453 22 A_A35:U12_A A 35 ? A 12 ? 20 1 1 A G 36 1_555 A C 11 1_555 -0.018 -0.059 -0.595 8.305 -9.563 2.239 23 A_G36:C11_A A 36 ? A 11 ? 19 1 1 A U 37 1_555 A G 9 1_555 1.040 -4.424 -1.058 0.528 -25.740 -107.793 24 A_U37:G9_A A 37 ? A 9 ? ? 6 1 A C 38 1_555 A G 51 1_555 -1.028 0.263 -1.136 31.215 -33.720 -16.581 25 A_C38:G51_A A 38 ? A 51 ? ? 1 1 A A 39 1_555 A U 50 1_555 0.235 0.152 0.154 -2.207 -5.703 10.216 26 A_A39:U50_A A 39 ? A 50 ? 20 1 1 A G 40 1_555 A C 49 1_555 -0.265 -0.169 -0.188 -8.380 -12.075 -2.850 27 A_G40:C49_A A 40 ? A 49 ? 19 1 1 A U 41 1_555 A A 48 1_555 0.301 -0.043 0.075 -4.010 -7.814 6.898 28 A_U41:A48_A A 41 ? A 48 ? 20 1 1 A C 42 1_555 A G 47 1_555 0.495 -0.213 -0.075 3.717 6.051 -0.812 29 A_C42:G47_A A 42 ? A 47 ? 19 1 1 A G 43 1_555 A A 46 1_555 7.127 -5.224 1.124 16.923 4.495 -11.096 30 A_G43:A46_A A 43 ? A 46 ? ? ? 1 B G 24 1_555 B U 21 1_555 -1.069 4.970 -0.314 11.977 8.099 104.724 31 B_G24:U21_B B 24 ? B 21 ? ? 6 1 B C 25 1_555 B G 20 1_555 -0.026 -0.185 -0.067 8.039 -12.801 -0.518 32 B_C25:G20_B B 25 ? B 20 ? 19 1 1 B A 26 1_555 B U 19 1_555 -0.213 -0.193 0.059 4.671 -6.891 -2.017 33 B_A26:U19_B B 26 ? B 19 ? 20 1 1 B G 27 1_555 B C 18 1_555 0.080 -0.263 -0.059 -6.590 -19.649 2.911 34 B_G27:C18_B B 27 ? B 18 ? 19 1 1 B C 28 1_555 B G 17 1_555 -0.029 -0.158 -0.033 5.742 -15.239 1.238 35 B_C28:G17_B B 28 ? B 17 ? 19 1 1 B C 29 1_555 B G 16 1_555 0.503 -0.380 0.540 -1.757 -13.577 -7.724 36 B_C29:G16_B B 29 ? B 16 ? 19 1 1 B C 31 1_555 B G 15 1_555 -0.780 -0.051 -0.814 21.026 -17.724 2.770 37 B_C31:G15_B B 31 ? B 15 ? 19 1 1 B U 32 1_555 B A 14 1_555 -0.134 -0.174 -0.326 -6.386 0.191 5.972 38 B_U32:A14_B B 32 ? B 14 ? 20 1 1 B G 33 1_555 B C 13 1_555 -0.295 0.013 0.061 -13.242 -9.744 0.734 39 B_G33:C13_B B 33 ? B 13 ? 19 1 1 B G 10 1_555 B C 34 1_555 -0.049 -0.472 -0.833 -12.322 14.963 -12.448 40 B_G10:C34_B B 10 ? B 34 ? 19 1 1 B C 11 1_555 B G 36 1_555 0.016 -0.154 -0.387 -1.414 -8.569 8.271 41 B_C11:G36_B B 11 ? B 36 ? 19 1 1 B U 37 1_555 B G 9 1_555 0.734 -5.079 0.081 -4.599 -8.443 -108.755 42 B_U37:G9_B B 37 ? B 9 ? ? 6 1 B C 38 1_555 B G 51 1_555 -0.304 -0.106 0.027 9.496 -18.238 -1.217 43 B_C38:G51_B B 38 ? B 51 ? 19 1 1 B A 39 1_555 B U 50 1_555 -0.248 -0.035 -0.271 -0.842 -9.386 5.590 44 B_A39:U50_B B 39 ? B 50 ? 20 1 1 B G 40 1_555 B C 49 1_555 -0.127 -0.113 -0.003 -1.588 -12.733 2.441 45 B_G40:C49_B B 40 ? B 49 ? 19 1 1 B U 41 1_555 B A 48 1_555 0.269 -0.080 0.190 -2.371 -9.619 2.080 46 B_U41:A48_B B 41 ? B 48 ? 20 1 1 B C 42 1_555 B G 47 1_555 0.181 -0.253 0.275 -0.997 7.622 0.570 47 B_C42:G47_B B 42 ? B 47 ? 19 1 1 B G 43 1_555 B A 46 1_555 6.956 -5.147 1.268 16.977 0.559 -15.334 48 B_G43:A46_B B 43 ? B 46 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 53 1_555 A C 6 1_555 A A 54 1_555 A U 5 1_555 -1.094 -1.069 3.597 4.042 13.041 29.267 -4.282 2.700 2.716 24.218 -7.507 32.232 1 AA_G53A54:U5C6_AA A 53 ? A 6 ? A 54 ? A 5 ? 1 A A 54 1_555 A U 5 1_555 A C 55 1_555 A G 4 1_555 0.407 -0.307 2.375 -3.123 -0.761 22.810 -0.576 -1.808 2.308 -1.913 7.846 23.032 2 AA_A54C55:G4U5_AA A 54 ? A 5 ? A 55 ? A 4 ? 1 A C 55 1_555 A G 4 1_555 A U 56 1_555 A A 3 1_555 -1.480 -1.638 3.726 -9.953 25.285 34.242 -4.798 0.980 2.367 36.647 14.426 43.460 3 AA_C55U56:A3G4_AA A 55 ? A 4 ? A 56 ? A 3 ? 1 A U 56 1_555 A A 3 1_555 A C 57 1_555 A G 2 1_555 -0.114 -1.875 2.863 9.222 0.996 23.794 -4.490 2.520 2.561 2.306 -21.355 25.514 4 AA_U56C57:G2A3_AA A 56 ? A 3 ? A 57 ? A 2 ? 1 A C 57 1_555 A G 2 1_555 A C 58 1_555 A GDP 1 1_555 0.163 -0.856 3.173 0.766 17.621 43.424 -2.445 -0.146 2.656 22.731 -0.988 46.709 5 AA_C57C58:GDP1G2_AA A 57 ? A 2 ? A 58 ? A 1 ? 1 A C 58 1_555 A GDP 1 1_555 B GDP 1 1_555 B C 58 1_555 0.933 -4.799 5.085 3.802 5.511 -49.374 5.046 1.559 5.476 -6.563 4.527 -49.798 6 AB_C58GDP1:C58GDP1_BA A 58 ? A 1 ? B 1 ? B 58 ? 1 B GDP 1 1_555 B C 58 1_555 B G 2 1_555 B C 57 1_555 -1.216 -1.927 3.394 -10.495 26.809 30.424 -5.246 0.718 1.593 41.316 16.174 41.651 7 BB_GDP1G2:C57C58_BB B 1 ? B 58 ? B 2 ? B 57 ? 1 B G 2 1_555 B C 57 1_555 B A 3 1_555 B U 56 1_555 -0.211 -1.255 2.778 -6.256 5.071 33.172 -2.806 -0.463 2.561 8.722 10.762 34.109 8 BB_G2A3:U56C57_BB B 2 ? B 57 ? B 3 ? B 56 ? 1 B A 3 1_555 B U 56 1_555 B G 4 1_555 B C 55 1_555 0.197 -2.102 4.318 10.276 14.351 32.457 -5.681 1.374 3.076 23.624 -16.915 36.832 9 BB_A3G4:C55U56_BB B 3 ? B 56 ? B 4 ? B 55 ? 1 B G 4 1_555 B C 55 1_555 B U 5 1_555 B A 54 1_555 0.404 -0.495 2.499 -5.529 0.212 26.753 -1.089 -1.889 2.365 0.453 11.789 27.309 10 BB_G4U5:A54C55_BB B 4 ? B 55 ? B 5 ? B 54 ? 1 B U 5 1_555 B A 54 1_555 B C 6 1_555 B G 53 1_555 0.708 -1.380 3.730 -5.326 6.635 40.271 -2.752 -1.641 3.355 9.508 7.632 41.123 11 BB_U5C6:G53A54_BB B 5 ? B 54 ? B 6 ? B 53 ? 1 A G 10 1_555 A C 34 1_555 A C 13 1_555 A G 33 1_555 -3.968 0.113 2.766 -0.992 17.051 62.362 -0.521 3.686 2.768 16.147 0.940 64.430 12 AA_G10C13:G33C34_AA A 10 ? A 34 ? A 13 ? A 33 ? 1 A C 13 1_555 A G 33 1_555 A A 14 1_555 A U 32 1_555 0.730 -1.949 3.726 -5.365 12.532 39.034 -4.169 -1.636 2.873 18.097 7.748 41.258 13 AA_C13A14:U32G33_AA A 13 ? A 33 ? A 14 ? A 32 ? 1 A A 14 1_555 A U 32 1_555 A G 15 1_555 A C 31 1_555 -1.049 -2.454 3.904 5.452 11.744 37.104 -5.149 2.256 2.851 17.804 -8.265 39.223 14 AA_A14G15:C31U32_AA A 14 ? A 32 ? A 15 ? A 31 ? 1 A G 15 1_555 A C 31 1_555 A G 16 1_555 A C 29 1_555 2.322 -1.373 2.920 -11.943 6.292 42.851 -2.243 -3.885 2.024 8.368 15.882 44.831 15 AA_G15G16:C29C31_AA A 15 ? A 31 ? A 16 ? A 29 ? 1 A G 16 1_555 A C 29 1_555 A G 17 1_555 A C 28 1_555 -0.259 -2.183 3.505 2.742 8.007 28.640 -5.873 1.062 2.770 15.758 -5.395 29.839 16 AA_G16G17:C28C29_AA A 16 ? A 29 ? A 17 ? A 28 ? 1 A G 17 1_555 A C 28 1_555 A C 18 1_555 A G 27 1_555 1.094 -2.397 3.079 0.758 2.277 26.262 -5.810 -2.212 2.895 4.997 -1.664 26.369 17 AA_G17C18:G27C28_AA A 17 ? A 28 ? A 18 ? A 27 ? 1 A C 18 1_555 A G 27 1_555 A U 19 1_555 A A 26 1_555 0.382 -1.271 3.527 7.901 4.609 49.218 -1.862 0.161 3.422 5.479 -9.392 50.009 18 AA_C18U19:A26G27_AA A 18 ? A 27 ? A 19 ? A 26 ? 1 A U 19 1_555 A A 26 1_555 A G 20 1_555 A G 24 1_555 3.338 -0.091 1.245 54.220 -159.718 -55.341 0.275 1.753 -0.445 82.726 28.083 -169.969 19 AA_U19G20:G24A26_AA A 19 ? A 26 ? A 20 ? A 24 ? 1 A A 35 1_555 A U 12 1_555 A G 36 1_555 A C 11 1_555 0.172 -2.122 3.351 9.586 6.981 32.268 -4.655 1.164 2.783 12.064 -16.565 34.324 20 AA_A35G36:C11U12_AA A 35 ? A 12 ? A 36 ? A 11 ? 1 A G 36 1_555 A C 11 1_555 A U 37 1_555 A G 9 1_555 -0.462 -1.218 2.994 0.898 1.112 105.788 -0.778 0.301 2.982 0.697 -0.563 105.795 21 AA_G36U37:G9C11_AA A 36 ? A 11 ? A 37 ? A 9 ? 1 A U 37 1_555 A G 9 1_555 A C 38 1_555 A G 51 1_555 2.281 -4.222 3.250 -1.183 5.229 -7.828 9.963 10.268 5.291 -33.597 -7.603 -9.486 22 AA_U37C38:G51G9_AA A 37 ? A 9 ? A 38 ? A 51 ? 1 A C 38 1_555 A G 51 1_555 A A 39 1_555 A U 50 1_555 0.649 -1.773 4.066 -11.894 22.073 44.375 -3.812 -1.697 2.711 26.842 14.464 50.655 23 AA_C38A39:U50G51_AA A 38 ? A 51 ? A 39 ? A 50 ? 1 A A 39 1_555 A U 50 1_555 A G 40 1_555 A C 49 1_555 -0.845 -1.802 3.366 1.222 8.723 27.514 -5.442 1.951 2.642 17.772 -2.490 28.864 24 AA_A39G40:C49U50_AA A 39 ? A 50 ? A 40 ? A 49 ? 1 A G 40 1_555 A C 49 1_555 A U 41 1_555 A A 48 1_555 0.442 -1.289 3.191 -2.083 8.606 34.273 -3.297 -1.011 2.766 14.310 3.463 35.365 25 AA_G40U41:A48C49_AA A 40 ? A 49 ? A 41 ? A 48 ? 1 A U 41 1_555 A A 48 1_555 A C 42 1_555 A G 47 1_555 -0.444 -1.457 3.151 0.566 9.223 33.452 -3.727 0.824 2.659 15.655 -0.960 34.670 26 AA_U41C42:G47A48_AA A 41 ? A 48 ? A 42 ? A 47 ? 1 A C 42 1_555 A G 47 1_555 A G 43 1_555 A A 46 1_555 -1.286 -1.063 2.922 -3.329 9.950 53.022 -1.711 1.236 2.766 11.022 3.688 53.976 27 AA_C42G43:A46G47_AA A 42 ? A 47 ? A 43 ? A 46 ? 1 B G 24 1_555 B U 21 1_555 B C 25 1_555 B G 20 1_555 -1.194 -3.187 0.676 119.233 -128.785 116.030 -1.378 0.797 1.383 -64.643 -59.848 177.620 28 BB_G24C25:G20U21_BB B 24 ? B 21 ? B 25 ? B 20 ? 1 B C 25 1_555 B G 20 1_555 B A 26 1_555 B U 19 1_555 -0.438 -1.553 3.262 -2.156 9.385 31.316 -4.273 0.429 2.719 16.893 3.881 32.727 29 BB_C25A26:U19G20_BB B 25 ? B 20 ? B 26 ? B 19 ? 1 B A 26 1_555 B U 19 1_555 B G 27 1_555 B C 18 1_555 0.770 -1.713 3.439 2.633 11.744 34.336 -4.352 -0.876 2.773 19.177 -4.300 36.325 30 BB_A26G27:C18U19_BB B 26 ? B 19 ? B 27 ? B 18 ? 1 B G 27 1_555 B C 18 1_555 B C 28 1_555 B G 17 1_555 -0.944 -2.067 2.928 -4.871 -0.355 27.007 -4.278 0.878 3.073 -0.751 10.323 27.437 31 BB_G27C28:G17C18_BB B 27 ? B 18 ? B 28 ? B 17 ? 1 B C 28 1_555 B G 17 1_555 B C 29 1_555 B G 16 1_555 0.054 -1.914 3.374 -3.586 9.394 37.084 -4.041 -0.513 2.807 14.448 5.515 38.376 32 BB_C28C29:G16G17_BB B 28 ? B 17 ? B 29 ? B 16 ? 1 B C 29 1_555 B G 16 1_555 B C 31 1_555 B G 15 1_555 -2.656 -1.603 2.598 11.300 9.243 39.367 -2.855 4.465 1.420 13.183 -16.117 41.886 33 BB_C29C31:G15G16_BB B 29 ? B 16 ? B 31 ? B 15 ? 1 B C 31 1_555 B G 15 1_555 B U 32 1_555 B A 14 1_555 -0.183 -2.050 4.095 -7.642 12.072 35.350 -4.930 -0.849 3.221 18.953 11.997 38.043 34 BB_C31U32:A14G15_BB B 31 ? B 15 ? B 32 ? B 14 ? 1 B U 32 1_555 B A 14 1_555 B G 33 1_555 B C 13 1_555 -0.143 -2.047 3.500 1.386 4.618 31.113 -4.656 0.529 3.162 8.545 -2.564 31.475 35 BB_U32G33:C13A14_BB B 32 ? B 14 ? B 33 ? B 13 ? 1 B G 33 1_555 B C 13 1_555 B G 10 1_555 B C 34 1_555 3.125 -1.323 -3.493 -134.905 -86.368 131.532 -1.090 -0.899 -3.971 -43.646 68.175 171.900 36 BB_G33G10:C34C13_BB B 33 ? B 13 ? B 10 ? B 34 ? 1 B G 10 1_555 B C 34 1_555 B C 11 1_555 B G 36 1_555 -7.034 -0.537 -2.493 4.828 0.564 -12.820 2.457 -31.248 0.157 -2.416 20.674 -13.707 37 BB_G10C11:G36C34_BB B 10 ? B 34 ? B 11 ? B 36 ? 1 B U 37 1_555 B G 9 1_555 B C 38 1_555 B G 51 1_555 1.563 -4.801 3.560 -8.768 6.887 -4.137 5.077 -15.497 5.172 -43.057 -54.816 -11.890 38 BB_U37C38:G51G9_BB B 37 ? B 9 ? B 38 ? B 51 ? 1 B C 38 1_555 B G 51 1_555 B A 39 1_555 B U 50 1_555 0.135 -1.502 3.390 -1.385 14.009 33.558 -4.271 -0.401 2.573 23.044 2.277 36.312 39 BB_C38A39:U50G51_BB B 38 ? B 51 ? B 39 ? B 50 ? 1 B A 39 1_555 B U 50 1_555 B G 40 1_555 B C 49 1_555 -0.423 -1.617 3.232 -2.464 7.847 30.846 -4.274 0.351 2.772 14.434 4.532 31.898 40 BB_A39G40:C49U50_BB B 39 ? B 50 ? B 40 ? B 49 ? 1 B G 40 1_555 B C 49 1_555 B U 41 1_555 B A 48 1_555 0.105 -1.308 3.261 -1.060 10.177 33.431 -3.628 -0.327 2.753 17.197 1.791 34.919 41 BB_G40U41:A48C49_BB B 40 ? B 49 ? B 41 ? B 48 ? 1 B U 41 1_555 B A 48 1_555 B C 42 1_555 B G 47 1_555 -0.135 -1.685 3.258 -2.019 8.182 32.045 -4.249 -0.081 2.759 14.510 3.581 33.106 42 BB_U41C42:G47A48_BB B 41 ? B 48 ? B 42 ? B 47 ? 1 B C 42 1_555 B G 47 1_555 B G 43 1_555 B A 46 1_555 -1.617 -1.170 2.637 -1.200 9.813 53.824 -1.736 1.705 2.439 10.738 1.313 54.657 43 BB_C42G43:A46G47_BB B 42 ? B 47 ? B 43 ? B 46 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'German Research Foundation (DFG)' Germany ? 1 'European Research Council (ERC)' 'European Union' ? 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 9FN3 _pdbx_initial_refinement_model.details 'Crystal structure of SAMURI with ProSeDMA' # _pdbx_related_exp_data_set.ordinal 1 _pdbx_related_exp_data_set.data_reference 10.51093/xrd-00260 _pdbx_related_exp_data_set.metadata_reference ? _pdbx_related_exp_data_set.data_set_type 'diffraction image data' _pdbx_related_exp_data_set.details ? # _space_group.name_H-M_alt 'P 42' _space_group.name_Hall 'P 4c' _space_group.IT_number 77 _space_group.crystal_system tetragonal _space_group.id 1 # _atom_sites.entry_id 9FN2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.013255 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013255 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013671 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? 9.41153 2.53737 ? ? 2.59044 63.03566 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #