data_9FND # _entry.id 9FND # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.402 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9FND pdb_00009fnd 10.2210/pdb9fnd/pdb WWPDB D_1292138140 ? ? EMDB EMD-50590 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2025-02-12 2 'Structure model' 1 1 2025-02-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_citation_author.name' 7 2 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9FND _pdbx_database_status.recvd_initial_deposition_date 2024-06-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Transcriptional activator PafBC bound to mycobacterial RNA polymerase' _pdbx_database_related.db_id EMD-50590 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 4 _pdbx_contact_author.email eilika@mol.biol.ethz.ch _pdbx_contact_author.name_first Eilika _pdbx_contact_author.name_last Weber-Ban _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5773-9274 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zdanowicz, R.' 1 0009-0005-5694-2704 'Schilling, C.M.' 2 0000-0003-0132-6777 'Rabl, J.' 3 0000-0001-6375-852X 'Mueller, A.U.' 4 0000-0003-3002-3695 'Boehringer, D.' 5 0000-0002-6666-8447 'Glockshuber, R.' 6 0000-0003-3320-3843 'Weber-Ban, E.' 7 0000-0002-5773-9274 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Adv' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2375-2548 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first eadq9054 _citation.page_last eadq9054 _citation.title 'Single-stranded DNA binding to the transcription factor PafBC triggers the mycobacterial DNA damage response.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1126/sciadv.adq9054 _citation.pdbx_database_id_PubMed 39919186 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schilling, C.M.' 1 0000-0003-0132-6777 primary 'Zdanowicz, R.' 2 0009-0005-5694-2704 primary 'Rabl, J.' 3 0000-0001-6375-852X primary 'Muller, A.U.' 4 0000-0003-3002-3695 primary 'Boehringer, D.' 5 0000-0002-6666-8447 primary 'Glockshuber, R.' 6 0000-0003-3320-3843 primary 'Weber-Ban, E.' 7 0000-0002-5773-9274 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator-like protein' 36207.555 1 ? ? ? ? 2 polymer man PafC 34044.402 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GLSAVSKVERLMNLVIALLSTRTYLPAEKIRTTVAGYADSPSDEAFSRMFERDKNELRDLGIPLETGRVSKWDSTEGYRI NRDSYALPPIGLTADEAAAVAVATQLWQSPELVTATQNAVLKLRAAGVDVDADGVGVAIASTATLPGVRGSEEVLQSLLS AIDEGRAVQFEHRPSRSADYTTRTVEPWGVVTHRGRWYLVGHDRDREDTRTFRLSRISAAARPIGPAGAVQKPQDVNLRD IVRRAVAEQPTGERARIWIAGGRATALRRQAVTSTPRTIGGRAGEEITVDIGTWDRLAREIASYGSDAVALEPSSLRDDV VERLRAHAAGGER ; ;GLSAVSKVERLMNLVIALLSTRTYLPAEKIRTTVAGYADSPSDEAFSRMFERDKNELRDLGIPLETGRVSKWDSTEGYRI NRDSYALPPIGLTADEAAAVAVATQLWQSPELVTATQNAVLKLRAAGVDVDADGVGVAIASTATLPGVRGSEEVLQSLLS AIDEGRAVQFEHRPSRSADYTTRTVEPWGVVTHRGRWYLVGHDRDREDTRTFRLSRISAAARPIGPAGAVQKPQDVNLRD IVRRAVAEQPTGERARIWIAGGRATALRRQAVTSTPRTIGGRAGEEITVDIGTWDRLAREIASYGSDAVALEPSSLRDDV VERLRAHAAGGER ; X ? 2 'polypeptide(L)' no no ;MSQVSTRLVRLLNMVPYFQANPKVTRAEAAAALGVTGKQLDADLDQLWMCGLPGYSPGDLIDFDFVGDTIEVTFSAGVDH PLRLTSTEATGILVALRALVDVPGMVDPEAARSAIAKIESAVGSQRAVVEGITEDTSAEPGAAATVRTAVRENRALTLEY YSASRDSLATRTVDPIRVVLVGDNSYLEAWCRSAEAVRLFRFDRIVDAQLLDDPAAPPPPAVAAGPDTSLFDADPSLPSA TLLIGAAAAWMFDYYPLRDITERPDGSCEATMTYASEDWMARFILGFGAEVQVLAPESLATRVRQAAEAALQAYARCV ; ;MSQVSTRLVRLLNMVPYFQANPKVTRAEAAAALGVTGKQLDADLDQLWMCGLPGYSPGDLIDFDFVGDTIEVTFSAGVDH PLRLTSTEATGILVALRALVDVPGMVDPEAARSAIAKIESAVGSQRAVVEGITEDTSAEPGAAATVRTAVRENRALTLEY YSASRDSLATRTVDPIRVVLVGDNSYLEAWCRSAEAVRLFRFDRIVDAQLLDDPAAPPPPAVAAGPDTSLFDADPSLPSA TLLIGAAAAWMFDYYPLRDITERPDGSCEATMTYASEDWMARFILGFGAEVQVLAPESLATRVRQAAEAALQAYARCV ; Y ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 SER n 1 4 ALA n 1 5 VAL n 1 6 SER n 1 7 LYS n 1 8 VAL n 1 9 GLU n 1 10 ARG n 1 11 LEU n 1 12 MET n 1 13 ASN n 1 14 LEU n 1 15 VAL n 1 16 ILE n 1 17 ALA n 1 18 LEU n 1 19 LEU n 1 20 SER n 1 21 THR n 1 22 ARG n 1 23 THR n 1 24 TYR n 1 25 LEU n 1 26 PRO n 1 27 ALA n 1 28 GLU n 1 29 LYS n 1 30 ILE n 1 31 ARG n 1 32 THR n 1 33 THR n 1 34 VAL n 1 35 ALA n 1 36 GLY n 1 37 TYR n 1 38 ALA n 1 39 ASP n 1 40 SER n 1 41 PRO n 1 42 SER n 1 43 ASP n 1 44 GLU n 1 45 ALA n 1 46 PHE n 1 47 SER n 1 48 ARG n 1 49 MET n 1 50 PHE n 1 51 GLU n 1 52 ARG n 1 53 ASP n 1 54 LYS n 1 55 ASN n 1 56 GLU n 1 57 LEU n 1 58 ARG n 1 59 ASP n 1 60 LEU n 1 61 GLY n 1 62 ILE n 1 63 PRO n 1 64 LEU n 1 65 GLU n 1 66 THR n 1 67 GLY n 1 68 ARG n 1 69 VAL n 1 70 SER n 1 71 LYS n 1 72 TRP n 1 73 ASP n 1 74 SER n 1 75 THR n 1 76 GLU n 1 77 GLY n 1 78 TYR n 1 79 ARG n 1 80 ILE n 1 81 ASN n 1 82 ARG n 1 83 ASP n 1 84 SER n 1 85 TYR n 1 86 ALA n 1 87 LEU n 1 88 PRO n 1 89 PRO n 1 90 ILE n 1 91 GLY n 1 92 LEU n 1 93 THR n 1 94 ALA n 1 95 ASP n 1 96 GLU n 1 97 ALA n 1 98 ALA n 1 99 ALA n 1 100 VAL n 1 101 ALA n 1 102 VAL n 1 103 ALA n 1 104 THR n 1 105 GLN n 1 106 LEU n 1 107 TRP n 1 108 GLN n 1 109 SER n 1 110 PRO n 1 111 GLU n 1 112 LEU n 1 113 VAL n 1 114 THR n 1 115 ALA n 1 116 THR n 1 117 GLN n 1 118 ASN n 1 119 ALA n 1 120 VAL n 1 121 LEU n 1 122 LYS n 1 123 LEU n 1 124 ARG n 1 125 ALA n 1 126 ALA n 1 127 GLY n 1 128 VAL n 1 129 ASP n 1 130 VAL n 1 131 ASP n 1 132 ALA n 1 133 ASP n 1 134 GLY n 1 135 VAL n 1 136 GLY n 1 137 VAL n 1 138 ALA n 1 139 ILE n 1 140 ALA n 1 141 SER n 1 142 THR n 1 143 ALA n 1 144 THR n 1 145 LEU n 1 146 PRO n 1 147 GLY n 1 148 VAL n 1 149 ARG n 1 150 GLY n 1 151 SER n 1 152 GLU n 1 153 GLU n 1 154 VAL n 1 155 LEU n 1 156 GLN n 1 157 SER n 1 158 LEU n 1 159 LEU n 1 160 SER n 1 161 ALA n 1 162 ILE n 1 163 ASP n 1 164 GLU n 1 165 GLY n 1 166 ARG n 1 167 ALA n 1 168 VAL n 1 169 GLN n 1 170 PHE n 1 171 GLU n 1 172 HIS n 1 173 ARG n 1 174 PRO n 1 175 SER n 1 176 ARG n 1 177 SER n 1 178 ALA n 1 179 ASP n 1 180 TYR n 1 181 THR n 1 182 THR n 1 183 ARG n 1 184 THR n 1 185 VAL n 1 186 GLU n 1 187 PRO n 1 188 TRP n 1 189 GLY n 1 190 VAL n 1 191 VAL n 1 192 THR n 1 193 HIS n 1 194 ARG n 1 195 GLY n 1 196 ARG n 1 197 TRP n 1 198 TYR n 1 199 LEU n 1 200 VAL n 1 201 GLY n 1 202 HIS n 1 203 ASP n 1 204 ARG n 1 205 ASP n 1 206 ARG n 1 207 GLU n 1 208 ASP n 1 209 THR n 1 210 ARG n 1 211 THR n 1 212 PHE n 1 213 ARG n 1 214 LEU n 1 215 SER n 1 216 ARG n 1 217 ILE n 1 218 SER n 1 219 ALA n 1 220 ALA n 1 221 ALA n 1 222 ARG n 1 223 PRO n 1 224 ILE n 1 225 GLY n 1 226 PRO n 1 227 ALA n 1 228 GLY n 1 229 ALA n 1 230 VAL n 1 231 GLN n 1 232 LYS n 1 233 PRO n 1 234 GLN n 1 235 ASP n 1 236 VAL n 1 237 ASN n 1 238 LEU n 1 239 ARG n 1 240 ASP n 1 241 ILE n 1 242 VAL n 1 243 ARG n 1 244 ARG n 1 245 ALA n 1 246 VAL n 1 247 ALA n 1 248 GLU n 1 249 GLN n 1 250 PRO n 1 251 THR n 1 252 GLY n 1 253 GLU n 1 254 ARG n 1 255 ALA n 1 256 ARG n 1 257 ILE n 1 258 TRP n 1 259 ILE n 1 260 ALA n 1 261 GLY n 1 262 GLY n 1 263 ARG n 1 264 ALA n 1 265 THR n 1 266 ALA n 1 267 LEU n 1 268 ARG n 1 269 ARG n 1 270 GLN n 1 271 ALA n 1 272 VAL n 1 273 THR n 1 274 SER n 1 275 THR n 1 276 PRO n 1 277 ARG n 1 278 THR n 1 279 ILE n 1 280 GLY n 1 281 GLY n 1 282 ARG n 1 283 ALA n 1 284 GLY n 1 285 GLU n 1 286 GLU n 1 287 ILE n 1 288 THR n 1 289 VAL n 1 290 ASP n 1 291 ILE n 1 292 GLY n 1 293 THR n 1 294 TRP n 1 295 ASP n 1 296 ARG n 1 297 LEU n 1 298 ALA n 1 299 ARG n 1 300 GLU n 1 301 ILE n 1 302 ALA n 1 303 SER n 1 304 TYR n 1 305 GLY n 1 306 SER n 1 307 ASP n 1 308 ALA n 1 309 VAL n 1 310 ALA n 1 311 LEU n 1 312 GLU n 1 313 PRO n 1 314 SER n 1 315 SER n 1 316 LEU n 1 317 ARG n 1 318 ASP n 1 319 ASP n 1 320 VAL n 1 321 VAL n 1 322 GLU n 1 323 ARG n 1 324 LEU n 1 325 ARG n 1 326 ALA n 1 327 HIS n 1 328 ALA n 1 329 ALA n 1 330 GLY n 1 331 GLY n 1 332 GLU n 1 333 ARG n 2 1 MET n 2 2 SER n 2 3 GLN n 2 4 VAL n 2 5 SER n 2 6 THR n 2 7 ARG n 2 8 LEU n 2 9 VAL n 2 10 ARG n 2 11 LEU n 2 12 LEU n 2 13 ASN n 2 14 MET n 2 15 VAL n 2 16 PRO n 2 17 TYR n 2 18 PHE n 2 19 GLN n 2 20 ALA n 2 21 ASN n 2 22 PRO n 2 23 LYS n 2 24 VAL n 2 25 THR n 2 26 ARG n 2 27 ALA n 2 28 GLU n 2 29 ALA n 2 30 ALA n 2 31 ALA n 2 32 ALA n 2 33 LEU n 2 34 GLY n 2 35 VAL n 2 36 THR n 2 37 GLY n 2 38 LYS n 2 39 GLN n 2 40 LEU n 2 41 ASP n 2 42 ALA n 2 43 ASP n 2 44 LEU n 2 45 ASP n 2 46 GLN n 2 47 LEU n 2 48 TRP n 2 49 MET n 2 50 CYS n 2 51 GLY n 2 52 LEU n 2 53 PRO n 2 54 GLY n 2 55 TYR n 2 56 SER n 2 57 PRO n 2 58 GLY n 2 59 ASP n 2 60 LEU n 2 61 ILE n 2 62 ASP n 2 63 PHE n 2 64 ASP n 2 65 PHE n 2 66 VAL n 2 67 GLY n 2 68 ASP n 2 69 THR n 2 70 ILE n 2 71 GLU n 2 72 VAL n 2 73 THR n 2 74 PHE n 2 75 SER n 2 76 ALA n 2 77 GLY n 2 78 VAL n 2 79 ASP n 2 80 HIS n 2 81 PRO n 2 82 LEU n 2 83 ARG n 2 84 LEU n 2 85 THR n 2 86 SER n 2 87 THR n 2 88 GLU n 2 89 ALA n 2 90 THR n 2 91 GLY n 2 92 ILE n 2 93 LEU n 2 94 VAL n 2 95 ALA n 2 96 LEU n 2 97 ARG n 2 98 ALA n 2 99 LEU n 2 100 VAL n 2 101 ASP n 2 102 VAL n 2 103 PRO n 2 104 GLY n 2 105 MET n 2 106 VAL n 2 107 ASP n 2 108 PRO n 2 109 GLU n 2 110 ALA n 2 111 ALA n 2 112 ARG n 2 113 SER n 2 114 ALA n 2 115 ILE n 2 116 ALA n 2 117 LYS n 2 118 ILE n 2 119 GLU n 2 120 SER n 2 121 ALA n 2 122 VAL n 2 123 GLY n 2 124 SER n 2 125 GLN n 2 126 ARG n 2 127 ALA n 2 128 VAL n 2 129 VAL n 2 130 GLU n 2 131 GLY n 2 132 ILE n 2 133 THR n 2 134 GLU n 2 135 ASP n 2 136 THR n 2 137 SER n 2 138 ALA n 2 139 GLU n 2 140 PRO n 2 141 GLY n 2 142 ALA n 2 143 ALA n 2 144 ALA n 2 145 THR n 2 146 VAL n 2 147 ARG n 2 148 THR n 2 149 ALA n 2 150 VAL n 2 151 ARG n 2 152 GLU n 2 153 ASN n 2 154 ARG n 2 155 ALA n 2 156 LEU n 2 157 THR n 2 158 LEU n 2 159 GLU n 2 160 TYR n 2 161 TYR n 2 162 SER n 2 163 ALA n 2 164 SER n 2 165 ARG n 2 166 ASP n 2 167 SER n 2 168 LEU n 2 169 ALA n 2 170 THR n 2 171 ARG n 2 172 THR n 2 173 VAL n 2 174 ASP n 2 175 PRO n 2 176 ILE n 2 177 ARG n 2 178 VAL n 2 179 VAL n 2 180 LEU n 2 181 VAL n 2 182 GLY n 2 183 ASP n 2 184 ASN n 2 185 SER n 2 186 TYR n 2 187 LEU n 2 188 GLU n 2 189 ALA n 2 190 TRP n 2 191 CYS n 2 192 ARG n 2 193 SER n 2 194 ALA n 2 195 GLU n 2 196 ALA n 2 197 VAL n 2 198 ARG n 2 199 LEU n 2 200 PHE n 2 201 ARG n 2 202 PHE n 2 203 ASP n 2 204 ARG n 2 205 ILE n 2 206 VAL n 2 207 ASP n 2 208 ALA n 2 209 GLN n 2 210 LEU n 2 211 LEU n 2 212 ASP n 2 213 ASP n 2 214 PRO n 2 215 ALA n 2 216 ALA n 2 217 PRO n 2 218 PRO n 2 219 PRO n 2 220 PRO n 2 221 ALA n 2 222 VAL n 2 223 ALA n 2 224 ALA n 2 225 GLY n 2 226 PRO n 2 227 ASP n 2 228 THR n 2 229 SER n 2 230 LEU n 2 231 PHE n 2 232 ASP n 2 233 ALA n 2 234 ASP n 2 235 PRO n 2 236 SER n 2 237 LEU n 2 238 PRO n 2 239 SER n 2 240 ALA n 2 241 THR n 2 242 LEU n 2 243 LEU n 2 244 ILE n 2 245 GLY n 2 246 ALA n 2 247 ALA n 2 248 ALA n 2 249 ALA n 2 250 TRP n 2 251 MET n 2 252 PHE n 2 253 ASP n 2 254 TYR n 2 255 TYR n 2 256 PRO n 2 257 LEU n 2 258 ARG n 2 259 ASP n 2 260 ILE n 2 261 THR n 2 262 GLU n 2 263 ARG n 2 264 PRO n 2 265 ASP n 2 266 GLY n 2 267 SER n 2 268 CYS n 2 269 GLU n 2 270 ALA n 2 271 THR n 2 272 MET n 2 273 THR n 2 274 TYR n 2 275 ALA n 2 276 SER n 2 277 GLU n 2 278 ASP n 2 279 TRP n 2 280 MET n 2 281 ALA n 2 282 ARG n 2 283 PHE n 2 284 ILE n 2 285 LEU n 2 286 GLY n 2 287 PHE n 2 288 GLY n 2 289 ALA n 2 290 GLU n 2 291 VAL n 2 292 GLN n 2 293 VAL n 2 294 LEU n 2 295 ALA n 2 296 PRO n 2 297 GLU n 2 298 SER n 2 299 LEU n 2 300 ALA n 2 301 THR n 2 302 ARG n 2 303 VAL n 2 304 ARG n 2 305 GLN n 2 306 ALA n 2 307 ALA n 2 308 GLU n 2 309 ALA n 2 310 ALA n 2 311 LEU n 2 312 GLN n 2 313 ALA n 2 314 TYR n 2 315 ALA n 2 316 ARG n 2 317 CYS n 2 318 VAL n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 333 ? ? 'pafB, MSMEI_3799' ? ? ? ? ? ? 'Mycolicibacterium smegmatis MC2 155' 246196 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 318 ? ? MSMEG_3888 ? ? ? ? ? ? 'Mycolicibacterium smegmatis MC2 155' 246196 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? X . n A 1 2 LEU 2 0 ? ? ? X . n A 1 3 SER 3 1 ? ? ? X . n A 1 4 ALA 4 2 2 ALA ALA X . n A 1 5 VAL 5 3 3 VAL VAL X . n A 1 6 SER 6 4 4 SER SER X . n A 1 7 LYS 7 5 5 LYS LYS X . n A 1 8 VAL 8 6 6 VAL VAL X . n A 1 9 GLU 9 7 7 GLU GLU X . n A 1 10 ARG 10 8 8 ARG ARG X . n A 1 11 LEU 11 9 9 LEU LEU X . n A 1 12 MET 12 10 10 MET MET X . n A 1 13 ASN 13 11 11 ASN ASN X . n A 1 14 LEU 14 12 12 LEU LEU X . n A 1 15 VAL 15 13 13 VAL VAL X . n A 1 16 ILE 16 14 14 ILE ILE X . n A 1 17 ALA 17 15 15 ALA ALA X . n A 1 18 LEU 18 16 16 LEU LEU X . n A 1 19 LEU 19 17 17 LEU LEU X . n A 1 20 SER 20 18 18 SER SER X . n A 1 21 THR 21 19 19 THR THR X . n A 1 22 ARG 22 20 20 ARG ARG X . n A 1 23 THR 23 21 21 THR THR X . n A 1 24 TYR 24 22 22 TYR TYR X . n A 1 25 LEU 25 23 23 LEU LEU X . n A 1 26 PRO 26 24 24 PRO PRO X . n A 1 27 ALA 27 25 25 ALA ALA X . n A 1 28 GLU 28 26 26 GLU GLU X . n A 1 29 LYS 29 27 27 LYS LYS X . n A 1 30 ILE 30 28 28 ILE ILE X . n A 1 31 ARG 31 29 29 ARG ARG X . n A 1 32 THR 32 30 30 THR THR X . n A 1 33 THR 33 31 31 THR THR X . n A 1 34 VAL 34 32 32 VAL VAL X . n A 1 35 ALA 35 33 33 ALA ALA X . n A 1 36 GLY 36 34 34 GLY GLY X . n A 1 37 TYR 37 35 35 TYR TYR X . n A 1 38 ALA 38 36 36 ALA ALA X . n A 1 39 ASP 39 37 37 ASP ASP X . n A 1 40 SER 40 38 38 SER SER X . n A 1 41 PRO 41 39 39 PRO PRO X . n A 1 42 SER 42 40 40 SER SER X . n A 1 43 ASP 43 41 41 ASP ASP X . n A 1 44 GLU 44 42 42 GLU GLU X . n A 1 45 ALA 45 43 43 ALA ALA X . n A 1 46 PHE 46 44 44 PHE PHE X . n A 1 47 SER 47 45 45 SER SER X . n A 1 48 ARG 48 46 46 ARG ARG X . n A 1 49 MET 49 47 47 MET MET X . n A 1 50 PHE 50 48 48 PHE PHE X . n A 1 51 GLU 51 49 49 GLU GLU X . n A 1 52 ARG 52 50 50 ARG ARG X . n A 1 53 ASP 53 51 51 ASP ASP X . n A 1 54 LYS 54 52 52 LYS LYS X . n A 1 55 ASN 55 53 53 ASN ASN X . n A 1 56 GLU 56 54 54 GLU GLU X . n A 1 57 LEU 57 55 55 LEU LEU X . n A 1 58 ARG 58 56 56 ARG ARG X . n A 1 59 ASP 59 57 57 ASP ASP X . n A 1 60 LEU 60 58 58 LEU LEU X . n A 1 61 GLY 61 59 59 GLY GLY X . n A 1 62 ILE 62 60 60 ILE ILE X . n A 1 63 PRO 63 61 61 PRO PRO X . n A 1 64 LEU 64 62 62 LEU LEU X . n A 1 65 GLU 65 63 63 GLU GLU X . n A 1 66 THR 66 64 64 THR THR X . n A 1 67 GLY 67 65 65 GLY GLY X . n A 1 68 ARG 68 66 66 ARG ARG X . n A 1 69 VAL 69 67 67 VAL VAL X . n A 1 70 SER 70 68 68 SER SER X . n A 1 71 LYS 71 69 69 LYS LYS X . n A 1 72 TRP 72 70 70 TRP TRP X . n A 1 73 ASP 73 71 71 ASP ASP X . n A 1 74 SER 74 72 72 SER SER X . n A 1 75 THR 75 73 73 THR THR X . n A 1 76 GLU 76 74 74 GLU GLU X . n A 1 77 GLY 77 75 75 GLY GLY X . n A 1 78 TYR 78 76 76 TYR TYR X . n A 1 79 ARG 79 77 77 ARG ARG X . n A 1 80 ILE 80 78 78 ILE ILE X . n A 1 81 ASN 81 79 79 ASN ASN X . n A 1 82 ARG 82 80 80 ARG ARG X . n A 1 83 ASP 83 81 81 ASP ASP X . n A 1 84 SER 84 82 82 SER SER X . n A 1 85 TYR 85 83 83 TYR TYR X . n A 1 86 ALA 86 84 84 ALA ALA X . n A 1 87 LEU 87 85 85 LEU LEU X . n A 1 88 PRO 88 86 86 PRO PRO X . n A 1 89 PRO 89 87 87 PRO PRO X . n A 1 90 ILE 90 88 88 ILE ILE X . n A 1 91 GLY 91 89 89 GLY GLY X . n A 1 92 LEU 92 90 90 LEU LEU X . n A 1 93 THR 93 91 91 THR THR X . n A 1 94 ALA 94 92 92 ALA ALA X . n A 1 95 ASP 95 93 93 ASP ASP X . n A 1 96 GLU 96 94 94 GLU GLU X . n A 1 97 ALA 97 95 95 ALA ALA X . n A 1 98 ALA 98 96 96 ALA ALA X . n A 1 99 ALA 99 97 97 ALA ALA X . n A 1 100 VAL 100 98 98 VAL VAL X . n A 1 101 ALA 101 99 99 ALA ALA X . n A 1 102 VAL 102 100 100 VAL VAL X . n A 1 103 ALA 103 101 101 ALA ALA X . n A 1 104 THR 104 102 102 THR THR X . n A 1 105 GLN 105 103 103 GLN GLN X . n A 1 106 LEU 106 104 104 LEU LEU X . n A 1 107 TRP 107 105 105 TRP TRP X . n A 1 108 GLN 108 106 106 GLN GLN X . n A 1 109 SER 109 107 107 SER SER X . n A 1 110 PRO 110 108 108 PRO PRO X . n A 1 111 GLU 111 109 109 GLU GLU X . n A 1 112 LEU 112 110 110 LEU LEU X . n A 1 113 VAL 113 111 111 VAL VAL X . n A 1 114 THR 114 112 112 THR THR X . n A 1 115 ALA 115 113 113 ALA ALA X . n A 1 116 THR 116 114 114 THR THR X . n A 1 117 GLN 117 115 115 GLN GLN X . n A 1 118 ASN 118 116 116 ASN ASN X . n A 1 119 ALA 119 117 117 ALA ALA X . n A 1 120 VAL 120 118 118 VAL VAL X . n A 1 121 LEU 121 119 119 LEU LEU X . n A 1 122 LYS 122 120 120 LYS LYS X . n A 1 123 LEU 123 121 121 LEU LEU X . n A 1 124 ARG 124 122 122 ARG ARG X . n A 1 125 ALA 125 123 123 ALA ALA X . n A 1 126 ALA 126 124 124 ALA ALA X . n A 1 127 GLY 127 125 125 GLY GLY X . n A 1 128 VAL 128 126 126 VAL VAL X . n A 1 129 ASP 129 127 127 ASP ASP X . n A 1 130 VAL 130 128 128 VAL VAL X . n A 1 131 ASP 131 129 129 ASP ASP X . n A 1 132 ALA 132 130 130 ALA ALA X . n A 1 133 ASP 133 131 131 ASP ASP X . n A 1 134 GLY 134 132 132 GLY GLY X . n A 1 135 VAL 135 133 133 VAL VAL X . n A 1 136 GLY 136 134 134 GLY GLY X . n A 1 137 VAL 137 135 135 VAL VAL X . n A 1 138 ALA 138 136 136 ALA ALA X . n A 1 139 ILE 139 137 137 ILE ILE X . n A 1 140 ALA 140 138 138 ALA ALA X . n A 1 141 SER 141 139 139 SER SER X . n A 1 142 THR 142 140 140 THR THR X . n A 1 143 ALA 143 141 141 ALA ALA X . n A 1 144 THR 144 142 142 THR THR X . n A 1 145 LEU 145 143 143 LEU LEU X . n A 1 146 PRO 146 144 144 PRO PRO X . n A 1 147 GLY 147 145 145 GLY GLY X . n A 1 148 VAL 148 146 146 VAL VAL X . n A 1 149 ARG 149 147 147 ARG ARG X . n A 1 150 GLY 150 148 148 GLY GLY X . n A 1 151 SER 151 149 149 SER SER X . n A 1 152 GLU 152 150 150 GLU GLU X . n A 1 153 GLU 153 151 151 GLU GLU X . n A 1 154 VAL 154 152 152 VAL VAL X . n A 1 155 LEU 155 153 153 LEU LEU X . n A 1 156 GLN 156 154 154 GLN GLN X . n A 1 157 SER 157 155 155 SER SER X . n A 1 158 LEU 158 156 156 LEU LEU X . n A 1 159 LEU 159 157 157 LEU LEU X . n A 1 160 SER 160 158 158 SER SER X . n A 1 161 ALA 161 159 159 ALA ALA X . n A 1 162 ILE 162 160 160 ILE ILE X . n A 1 163 ASP 163 161 161 ASP ASP X . n A 1 164 GLU 164 162 162 GLU GLU X . n A 1 165 GLY 165 163 163 GLY GLY X . n A 1 166 ARG 166 164 164 ARG ARG X . n A 1 167 ALA 167 165 165 ALA ALA X . n A 1 168 VAL 168 166 166 VAL VAL X . n A 1 169 GLN 169 167 167 GLN GLN X . n A 1 170 PHE 170 168 168 PHE PHE X . n A 1 171 GLU 171 169 169 GLU GLU X . n A 1 172 HIS 172 170 170 HIS HIS X . n A 1 173 ARG 173 171 171 ARG ARG X . n A 1 174 PRO 174 172 172 PRO PRO X . n A 1 175 SER 175 173 173 SER SER X . n A 1 176 ARG 176 174 174 ARG ARG X . n A 1 177 SER 177 175 175 SER SER X . n A 1 178 ALA 178 176 176 ALA ALA X . n A 1 179 ASP 179 177 177 ASP ASP X . n A 1 180 TYR 180 178 178 TYR TYR X . n A 1 181 THR 181 179 179 THR THR X . n A 1 182 THR 182 180 180 THR THR X . n A 1 183 ARG 183 181 181 ARG ARG X . n A 1 184 THR 184 182 182 THR THR X . n A 1 185 VAL 185 183 183 VAL VAL X . n A 1 186 GLU 186 184 184 GLU GLU X . n A 1 187 PRO 187 185 185 PRO PRO X . n A 1 188 TRP 188 186 186 TRP TRP X . n A 1 189 GLY 189 187 187 GLY GLY X . n A 1 190 VAL 190 188 188 VAL VAL X . n A 1 191 VAL 191 189 189 VAL VAL X . n A 1 192 THR 192 190 190 THR THR X . n A 1 193 HIS 193 191 191 HIS HIS X . n A 1 194 ARG 194 192 192 ARG ARG X . n A 1 195 GLY 195 193 193 GLY GLY X . n A 1 196 ARG 196 194 194 ARG ARG X . n A 1 197 TRP 197 195 195 TRP TRP X . n A 1 198 TYR 198 196 196 TYR TYR X . n A 1 199 LEU 199 197 197 LEU LEU X . n A 1 200 VAL 200 198 198 VAL VAL X . n A 1 201 GLY 201 199 199 GLY GLY X . n A 1 202 HIS 202 200 200 HIS HIS X . n A 1 203 ASP 203 201 201 ASP ASP X . n A 1 204 ARG 204 202 202 ARG ARG X . n A 1 205 ASP 205 203 203 ASP ASP X . n A 1 206 ARG 206 204 204 ARG ARG X . n A 1 207 GLU 207 205 205 GLU GLU X . n A 1 208 ASP 208 206 206 ASP ASP X . n A 1 209 THR 209 207 207 THR THR X . n A 1 210 ARG 210 208 208 ARG ARG X . n A 1 211 THR 211 209 209 THR THR X . n A 1 212 PHE 212 210 210 PHE PHE X . n A 1 213 ARG 213 211 211 ARG ARG X . n A 1 214 LEU 214 212 212 LEU LEU X . n A 1 215 SER 215 213 213 SER SER X . n A 1 216 ARG 216 214 214 ARG ARG X . n A 1 217 ILE 217 215 215 ILE ILE X . n A 1 218 SER 218 216 216 SER SER X . n A 1 219 ALA 219 217 217 ALA ALA X . n A 1 220 ALA 220 218 218 ALA ALA X . n A 1 221 ALA 221 219 219 ALA ALA X . n A 1 222 ARG 222 220 220 ARG ARG X . n A 1 223 PRO 223 221 221 PRO PRO X . n A 1 224 ILE 224 222 222 ILE ILE X . n A 1 225 GLY 225 223 223 GLY GLY X . n A 1 226 PRO 226 224 224 PRO PRO X . n A 1 227 ALA 227 225 225 ALA ALA X . n A 1 228 GLY 228 226 226 GLY GLY X . n A 1 229 ALA 229 227 227 ALA ALA X . n A 1 230 VAL 230 228 228 VAL VAL X . n A 1 231 GLN 231 229 229 GLN GLN X . n A 1 232 LYS 232 230 230 LYS LYS X . n A 1 233 PRO 233 231 231 PRO PRO X . n A 1 234 GLN 234 232 232 GLN GLN X . n A 1 235 ASP 235 233 233 ASP ASP X . n A 1 236 VAL 236 234 234 VAL VAL X . n A 1 237 ASN 237 235 235 ASN ASN X . n A 1 238 LEU 238 236 236 LEU LEU X . n A 1 239 ARG 239 237 237 ARG ARG X . n A 1 240 ASP 240 238 238 ASP ASP X . n A 1 241 ILE 241 239 239 ILE ILE X . n A 1 242 VAL 242 240 240 VAL VAL X . n A 1 243 ARG 243 241 241 ARG ARG X . n A 1 244 ARG 244 242 242 ARG ARG X . n A 1 245 ALA 245 243 243 ALA ALA X . n A 1 246 VAL 246 244 244 VAL VAL X . n A 1 247 ALA 247 245 245 ALA ALA X . n A 1 248 GLU 248 246 246 GLU GLU X . n A 1 249 GLN 249 247 247 GLN GLN X . n A 1 250 PRO 250 248 248 PRO PRO X . n A 1 251 THR 251 249 249 THR THR X . n A 1 252 GLY 252 250 250 GLY GLY X . n A 1 253 GLU 253 251 251 GLU GLU X . n A 1 254 ARG 254 252 252 ARG ARG X . n A 1 255 ALA 255 253 253 ALA ALA X . n A 1 256 ARG 256 254 254 ARG ARG X . n A 1 257 ILE 257 255 255 ILE ILE X . n A 1 258 TRP 258 256 256 TRP TRP X . n A 1 259 ILE 259 257 257 ILE ILE X . n A 1 260 ALA 260 258 258 ALA ALA X . n A 1 261 GLY 261 259 259 GLY GLY X . n A 1 262 GLY 262 260 260 GLY GLY X . n A 1 263 ARG 263 261 261 ARG ARG X . n A 1 264 ALA 264 262 262 ALA ALA X . n A 1 265 THR 265 263 263 THR THR X . n A 1 266 ALA 266 264 264 ALA ALA X . n A 1 267 LEU 267 265 265 LEU LEU X . n A 1 268 ARG 268 266 266 ARG ARG X . n A 1 269 ARG 269 267 267 ARG ARG X . n A 1 270 GLN 270 268 268 GLN GLN X . n A 1 271 ALA 271 269 269 ALA ALA X . n A 1 272 VAL 272 270 270 VAL VAL X . n A 1 273 THR 273 271 271 THR THR X . n A 1 274 SER 274 272 272 SER SER X . n A 1 275 THR 275 273 273 THR THR X . n A 1 276 PRO 276 274 274 PRO PRO X . n A 1 277 ARG 277 275 275 ARG ARG X . n A 1 278 THR 278 276 276 THR THR X . n A 1 279 ILE 279 277 277 ILE ILE X . n A 1 280 GLY 280 278 278 GLY GLY X . n A 1 281 GLY 281 279 279 GLY GLY X . n A 1 282 ARG 282 280 280 ARG ARG X . n A 1 283 ALA 283 281 281 ALA ALA X . n A 1 284 GLY 284 282 282 GLY GLY X . n A 1 285 GLU 285 283 283 GLU GLU X . n A 1 286 GLU 286 284 284 GLU GLU X . n A 1 287 ILE 287 285 285 ILE ILE X . n A 1 288 THR 288 286 286 THR THR X . n A 1 289 VAL 289 287 287 VAL VAL X . n A 1 290 ASP 290 288 288 ASP ASP X . n A 1 291 ILE 291 289 289 ILE ILE X . n A 1 292 GLY 292 290 290 GLY GLY X . n A 1 293 THR 293 291 291 THR THR X . n A 1 294 TRP 294 292 292 TRP TRP X . n A 1 295 ASP 295 293 293 ASP ASP X . n A 1 296 ARG 296 294 294 ARG ARG X . n A 1 297 LEU 297 295 295 LEU LEU X . n A 1 298 ALA 298 296 296 ALA ALA X . n A 1 299 ARG 299 297 297 ARG ARG X . n A 1 300 GLU 300 298 298 GLU GLU X . n A 1 301 ILE 301 299 299 ILE ILE X . n A 1 302 ALA 302 300 300 ALA ALA X . n A 1 303 SER 303 301 301 SER SER X . n A 1 304 TYR 304 302 302 TYR TYR X . n A 1 305 GLY 305 303 303 GLY GLY X . n A 1 306 SER 306 304 304 SER SER X . n A 1 307 ASP 307 305 305 ASP ASP X . n A 1 308 ALA 308 306 306 ALA ALA X . n A 1 309 VAL 309 307 307 VAL VAL X . n A 1 310 ALA 310 308 308 ALA ALA X . n A 1 311 LEU 311 309 309 LEU LEU X . n A 1 312 GLU 312 310 310 GLU GLU X . n A 1 313 PRO 313 311 311 PRO PRO X . n A 1 314 SER 314 312 312 SER SER X . n A 1 315 SER 315 313 313 SER SER X . n A 1 316 LEU 316 314 314 LEU LEU X . n A 1 317 ARG 317 315 315 ARG ARG X . n A 1 318 ASP 318 316 316 ASP ASP X . n A 1 319 ASP 319 317 317 ASP ASP X . n A 1 320 VAL 320 318 318 VAL VAL X . n A 1 321 VAL 321 319 319 VAL VAL X . n A 1 322 GLU 322 320 320 GLU GLU X . n A 1 323 ARG 323 321 321 ARG ARG X . n A 1 324 LEU 324 322 322 LEU LEU X . n A 1 325 ARG 325 323 323 ARG ARG X . n A 1 326 ALA 326 324 324 ALA ALA X . n A 1 327 HIS 327 325 325 HIS HIS X . n A 1 328 ALA 328 326 326 ALA ALA X . n A 1 329 ALA 329 327 327 ALA ALA X . n A 1 330 GLY 330 328 328 GLY GLY X . n A 1 331 GLY 331 329 329 GLY GLY X . n A 1 332 GLU 332 330 330 GLU GLU X . n A 1 333 ARG 333 331 331 ARG ARG X . n B 2 1 MET 1 1 ? ? ? Y . n B 2 2 SER 2 2 2 SER SER Y . n B 2 3 GLN 3 3 3 GLN GLN Y . n B 2 4 VAL 4 4 4 VAL VAL Y . n B 2 5 SER 5 5 5 SER SER Y . n B 2 6 THR 6 6 6 THR THR Y . n B 2 7 ARG 7 7 7 ARG ARG Y . n B 2 8 LEU 8 8 8 LEU LEU Y . n B 2 9 VAL 9 9 9 VAL VAL Y . n B 2 10 ARG 10 10 10 ARG ARG Y . n B 2 11 LEU 11 11 11 LEU LEU Y . n B 2 12 LEU 12 12 12 LEU LEU Y . n B 2 13 ASN 13 13 13 ASN ASN Y . n B 2 14 MET 14 14 14 MET MET Y . n B 2 15 VAL 15 15 15 VAL VAL Y . n B 2 16 PRO 16 16 16 PRO PRO Y . n B 2 17 TYR 17 17 17 TYR TYR Y . n B 2 18 PHE 18 18 18 PHE PHE Y . n B 2 19 GLN 19 19 19 GLN GLN Y . n B 2 20 ALA 20 20 20 ALA ALA Y . n B 2 21 ASN 21 21 21 ASN ASN Y . n B 2 22 PRO 22 22 22 PRO PRO Y . n B 2 23 LYS 23 23 23 LYS LYS Y . n B 2 24 VAL 24 24 24 VAL VAL Y . n B 2 25 THR 25 25 25 THR THR Y . n B 2 26 ARG 26 26 26 ARG ARG Y . n B 2 27 ALA 27 27 27 ALA ALA Y . n B 2 28 GLU 28 28 28 GLU GLU Y . n B 2 29 ALA 29 29 29 ALA ALA Y . n B 2 30 ALA 30 30 30 ALA ALA Y . n B 2 31 ALA 31 31 31 ALA ALA Y . n B 2 32 ALA 32 32 32 ALA ALA Y . n B 2 33 LEU 33 33 33 LEU LEU Y . n B 2 34 GLY 34 34 34 GLY GLY Y . n B 2 35 VAL 35 35 35 VAL VAL Y . n B 2 36 THR 36 36 36 THR THR Y . n B 2 37 GLY 37 37 37 GLY GLY Y . n B 2 38 LYS 38 38 38 LYS LYS Y . n B 2 39 GLN 39 39 39 GLN GLN Y . n B 2 40 LEU 40 40 40 LEU LEU Y . n B 2 41 ASP 41 41 41 ASP ASP Y . n B 2 42 ALA 42 42 42 ALA ALA Y . n B 2 43 ASP 43 43 43 ASP ASP Y . n B 2 44 LEU 44 44 44 LEU LEU Y . n B 2 45 ASP 45 45 45 ASP ASP Y . n B 2 46 GLN 46 46 46 GLN GLN Y . n B 2 47 LEU 47 47 47 LEU LEU Y . n B 2 48 TRP 48 48 48 TRP TRP Y . n B 2 49 MET 49 49 49 MET MET Y . n B 2 50 CYS 50 50 50 CYS CYS Y . n B 2 51 GLY 51 51 51 GLY GLY Y . n B 2 52 LEU 52 52 52 LEU LEU Y . n B 2 53 PRO 53 53 53 PRO PRO Y . n B 2 54 GLY 54 54 54 GLY GLY Y . n B 2 55 TYR 55 55 55 TYR TYR Y . n B 2 56 SER 56 56 56 SER SER Y . n B 2 57 PRO 57 57 57 PRO PRO Y . n B 2 58 GLY 58 58 58 GLY GLY Y . n B 2 59 ASP 59 59 59 ASP ASP Y . n B 2 60 LEU 60 60 60 LEU LEU Y . n B 2 61 ILE 61 61 61 ILE ILE Y . n B 2 62 ASP 62 62 62 ASP ASP Y . n B 2 63 PHE 63 63 63 PHE PHE Y . n B 2 64 ASP 64 64 64 ASP ASP Y . n B 2 65 PHE 65 65 65 PHE PHE Y . n B 2 66 VAL 66 66 66 VAL VAL Y . n B 2 67 GLY 67 67 67 GLY GLY Y . n B 2 68 ASP 68 68 68 ASP ASP Y . n B 2 69 THR 69 69 69 THR THR Y . n B 2 70 ILE 70 70 70 ILE ILE Y . n B 2 71 GLU 71 71 71 GLU GLU Y . n B 2 72 VAL 72 72 72 VAL VAL Y . n B 2 73 THR 73 73 73 THR THR Y . n B 2 74 PHE 74 74 74 PHE PHE Y . n B 2 75 SER 75 75 75 SER SER Y . n B 2 76 ALA 76 76 76 ALA ALA Y . n B 2 77 GLY 77 77 77 GLY GLY Y . n B 2 78 VAL 78 78 78 VAL VAL Y . n B 2 79 ASP 79 79 79 ASP ASP Y . n B 2 80 HIS 80 80 80 HIS HIS Y . n B 2 81 PRO 81 81 81 PRO PRO Y . n B 2 82 LEU 82 82 82 LEU LEU Y . n B 2 83 ARG 83 83 83 ARG ARG Y . n B 2 84 LEU 84 84 84 LEU LEU Y . n B 2 85 THR 85 85 85 THR THR Y . n B 2 86 SER 86 86 86 SER SER Y . n B 2 87 THR 87 87 87 THR THR Y . n B 2 88 GLU 88 88 88 GLU GLU Y . n B 2 89 ALA 89 89 89 ALA ALA Y . n B 2 90 THR 90 90 90 THR THR Y . n B 2 91 GLY 91 91 91 GLY GLY Y . n B 2 92 ILE 92 92 92 ILE ILE Y . n B 2 93 LEU 93 93 93 LEU LEU Y . n B 2 94 VAL 94 94 94 VAL VAL Y . n B 2 95 ALA 95 95 95 ALA ALA Y . n B 2 96 LEU 96 96 96 LEU LEU Y . n B 2 97 ARG 97 97 97 ARG ARG Y . n B 2 98 ALA 98 98 98 ALA ALA Y . n B 2 99 LEU 99 99 99 LEU LEU Y . n B 2 100 VAL 100 100 100 VAL VAL Y . n B 2 101 ASP 101 101 101 ASP ASP Y . n B 2 102 VAL 102 102 102 VAL VAL Y . n B 2 103 PRO 103 103 103 PRO PRO Y . n B 2 104 GLY 104 104 104 GLY GLY Y . n B 2 105 MET 105 105 105 MET MET Y . n B 2 106 VAL 106 106 106 VAL VAL Y . n B 2 107 ASP 107 107 107 ASP ASP Y . n B 2 108 PRO 108 108 108 PRO PRO Y . n B 2 109 GLU 109 109 109 GLU GLU Y . n B 2 110 ALA 110 110 110 ALA ALA Y . n B 2 111 ALA 111 111 111 ALA ALA Y . n B 2 112 ARG 112 112 112 ARG ARG Y . n B 2 113 SER 113 113 113 SER SER Y . n B 2 114 ALA 114 114 114 ALA ALA Y . n B 2 115 ILE 115 115 115 ILE ILE Y . n B 2 116 ALA 116 116 116 ALA ALA Y . n B 2 117 LYS 117 117 117 LYS LYS Y . n B 2 118 ILE 118 118 118 ILE ILE Y . n B 2 119 GLU 119 119 119 GLU GLU Y . n B 2 120 SER 120 120 120 SER SER Y . n B 2 121 ALA 121 121 121 ALA ALA Y . n B 2 122 VAL 122 122 122 VAL VAL Y . n B 2 123 GLY 123 123 123 GLY GLY Y . n B 2 124 SER 124 124 124 SER SER Y . n B 2 125 GLN 125 125 125 GLN GLN Y . n B 2 126 ARG 126 126 126 ARG ARG Y . n B 2 127 ALA 127 127 127 ALA ALA Y . n B 2 128 VAL 128 128 128 VAL VAL Y . n B 2 129 VAL 129 129 129 VAL VAL Y . n B 2 130 GLU 130 130 130 GLU GLU Y . n B 2 131 GLY 131 131 131 GLY GLY Y . n B 2 132 ILE 132 132 132 ILE ILE Y . n B 2 133 THR 133 133 133 THR THR Y . n B 2 134 GLU 134 134 134 GLU GLU Y . n B 2 135 ASP 135 135 135 ASP ASP Y . n B 2 136 THR 136 136 136 THR THR Y . n B 2 137 SER 137 137 137 SER SER Y . n B 2 138 ALA 138 138 138 ALA ALA Y . n B 2 139 GLU 139 139 139 GLU GLU Y . n B 2 140 PRO 140 140 140 PRO PRO Y . n B 2 141 GLY 141 141 141 GLY GLY Y . n B 2 142 ALA 142 142 142 ALA ALA Y . n B 2 143 ALA 143 143 143 ALA ALA Y . n B 2 144 ALA 144 144 144 ALA ALA Y . n B 2 145 THR 145 145 145 THR THR Y . n B 2 146 VAL 146 146 146 VAL VAL Y . n B 2 147 ARG 147 147 147 ARG ARG Y . n B 2 148 THR 148 148 148 THR THR Y . n B 2 149 ALA 149 149 149 ALA ALA Y . n B 2 150 VAL 150 150 150 VAL VAL Y . n B 2 151 ARG 151 151 151 ARG ARG Y . n B 2 152 GLU 152 152 152 GLU GLU Y . n B 2 153 ASN 153 153 153 ASN ASN Y . n B 2 154 ARG 154 154 154 ARG ARG Y . n B 2 155 ALA 155 155 155 ALA ALA Y . n B 2 156 LEU 156 156 156 LEU LEU Y . n B 2 157 THR 157 157 157 THR THR Y . n B 2 158 LEU 158 158 158 LEU LEU Y . n B 2 159 GLU 159 159 159 GLU GLU Y . n B 2 160 TYR 160 160 160 TYR TYR Y . n B 2 161 TYR 161 161 161 TYR TYR Y . n B 2 162 SER 162 162 162 SER SER Y . n B 2 163 ALA 163 163 163 ALA ALA Y . n B 2 164 SER 164 164 164 SER SER Y . n B 2 165 ARG 165 165 165 ARG ARG Y . n B 2 166 ASP 166 166 166 ASP ASP Y . n B 2 167 SER 167 167 167 SER SER Y . n B 2 168 LEU 168 168 168 LEU LEU Y . n B 2 169 ALA 169 169 169 ALA ALA Y . n B 2 170 THR 170 170 170 THR THR Y . n B 2 171 ARG 171 171 171 ARG ARG Y . n B 2 172 THR 172 172 172 THR THR Y . n B 2 173 VAL 173 173 173 VAL VAL Y . n B 2 174 ASP 174 174 174 ASP ASP Y . n B 2 175 PRO 175 175 175 PRO PRO Y . n B 2 176 ILE 176 176 176 ILE ILE Y . n B 2 177 ARG 177 177 177 ARG ARG Y . n B 2 178 VAL 178 178 178 VAL VAL Y . n B 2 179 VAL 179 179 179 VAL VAL Y . n B 2 180 LEU 180 180 180 LEU LEU Y . n B 2 181 VAL 181 181 181 VAL VAL Y . n B 2 182 GLY 182 182 182 GLY GLY Y . n B 2 183 ASP 183 183 183 ASP ASP Y . n B 2 184 ASN 184 184 184 ASN ASN Y . n B 2 185 SER 185 185 185 SER SER Y . n B 2 186 TYR 186 186 186 TYR TYR Y . n B 2 187 LEU 187 187 187 LEU LEU Y . n B 2 188 GLU 188 188 188 GLU GLU Y . n B 2 189 ALA 189 189 189 ALA ALA Y . n B 2 190 TRP 190 190 190 TRP TRP Y . n B 2 191 CYS 191 191 191 CYS CYS Y . n B 2 192 ARG 192 192 192 ARG ARG Y . n B 2 193 SER 193 193 193 SER SER Y . n B 2 194 ALA 194 194 194 ALA ALA Y . n B 2 195 GLU 195 195 195 GLU GLU Y . n B 2 196 ALA 196 196 196 ALA ALA Y . n B 2 197 VAL 197 197 197 VAL VAL Y . n B 2 198 ARG 198 198 198 ARG ARG Y . n B 2 199 LEU 199 199 199 LEU LEU Y . n B 2 200 PHE 200 200 200 PHE PHE Y . n B 2 201 ARG 201 201 201 ARG ARG Y . n B 2 202 PHE 202 202 202 PHE PHE Y . n B 2 203 ASP 203 203 203 ASP ASP Y . n B 2 204 ARG 204 204 204 ARG ARG Y . n B 2 205 ILE 205 205 205 ILE ILE Y . n B 2 206 VAL 206 206 206 VAL VAL Y . n B 2 207 ASP 207 207 207 ASP ASP Y . n B 2 208 ALA 208 208 208 ALA ALA Y . n B 2 209 GLN 209 209 209 GLN GLN Y . n B 2 210 LEU 210 210 210 LEU LEU Y . n B 2 211 LEU 211 211 211 LEU LEU Y . n B 2 212 ASP 212 212 212 ASP ASP Y . n B 2 213 ASP 213 213 213 ASP ASP Y . n B 2 214 PRO 214 214 214 PRO PRO Y . n B 2 215 ALA 215 215 215 ALA ALA Y . n B 2 216 ALA 216 216 216 ALA ALA Y . n B 2 217 PRO 217 217 217 PRO PRO Y . n B 2 218 PRO 218 218 218 PRO PRO Y . n B 2 219 PRO 219 219 219 PRO PRO Y . n B 2 220 PRO 220 220 220 PRO PRO Y . n B 2 221 ALA 221 221 221 ALA ALA Y . n B 2 222 VAL 222 222 222 VAL VAL Y . n B 2 223 ALA 223 223 223 ALA ALA Y . n B 2 224 ALA 224 224 224 ALA ALA Y . n B 2 225 GLY 225 225 225 GLY GLY Y . n B 2 226 PRO 226 226 226 PRO PRO Y . n B 2 227 ASP 227 227 227 ASP ASP Y . n B 2 228 THR 228 228 228 THR THR Y . n B 2 229 SER 229 229 229 SER SER Y . n B 2 230 LEU 230 230 230 LEU LEU Y . n B 2 231 PHE 231 231 231 PHE PHE Y . n B 2 232 ASP 232 232 232 ASP ASP Y . n B 2 233 ALA 233 233 233 ALA ALA Y . n B 2 234 ASP 234 234 234 ASP ASP Y . n B 2 235 PRO 235 235 235 PRO PRO Y . n B 2 236 SER 236 236 236 SER SER Y . n B 2 237 LEU 237 237 237 LEU LEU Y . n B 2 238 PRO 238 238 238 PRO PRO Y . n B 2 239 SER 239 239 239 SER SER Y . n B 2 240 ALA 240 240 240 ALA ALA Y . n B 2 241 THR 241 241 241 THR THR Y . n B 2 242 LEU 242 242 242 LEU LEU Y . n B 2 243 LEU 243 243 243 LEU LEU Y . n B 2 244 ILE 244 244 244 ILE ILE Y . n B 2 245 GLY 245 245 245 GLY GLY Y . n B 2 246 ALA 246 246 246 ALA ALA Y . n B 2 247 ALA 247 247 247 ALA ALA Y . n B 2 248 ALA 248 248 248 ALA ALA Y . n B 2 249 ALA 249 249 249 ALA ALA Y . n B 2 250 TRP 250 250 250 TRP TRP Y . n B 2 251 MET 251 251 251 MET MET Y . n B 2 252 PHE 252 252 252 PHE PHE Y . n B 2 253 ASP 253 253 253 ASP ASP Y . n B 2 254 TYR 254 254 254 TYR TYR Y . n B 2 255 TYR 255 255 255 TYR TYR Y . n B 2 256 PRO 256 256 256 PRO PRO Y . n B 2 257 LEU 257 257 257 LEU LEU Y . n B 2 258 ARG 258 258 258 ARG ARG Y . n B 2 259 ASP 259 259 259 ASP ASP Y . n B 2 260 ILE 260 260 260 ILE ILE Y . n B 2 261 THR 261 261 261 THR THR Y . n B 2 262 GLU 262 262 262 GLU GLU Y . n B 2 263 ARG 263 263 263 ARG ARG Y . n B 2 264 PRO 264 264 264 PRO PRO Y . n B 2 265 ASP 265 265 265 ASP ASP Y . n B 2 266 GLY 266 266 266 GLY GLY Y . n B 2 267 SER 267 267 267 SER SER Y . n B 2 268 CYS 268 268 268 CYS CYS Y . n B 2 269 GLU 269 269 269 GLU GLU Y . n B 2 270 ALA 270 270 270 ALA ALA Y . n B 2 271 THR 271 271 271 THR THR Y . n B 2 272 MET 272 272 272 MET MET Y . n B 2 273 THR 273 273 273 THR THR Y . n B 2 274 TYR 274 274 274 TYR TYR Y . n B 2 275 ALA 275 275 275 ALA ALA Y . n B 2 276 SER 276 276 276 SER SER Y . n B 2 277 GLU 277 277 277 GLU GLU Y . n B 2 278 ASP 278 278 278 ASP ASP Y . n B 2 279 TRP 279 279 279 TRP TRP Y . n B 2 280 MET 280 280 280 MET MET Y . n B 2 281 ALA 281 281 281 ALA ALA Y . n B 2 282 ARG 282 282 282 ARG ARG Y . n B 2 283 PHE 283 283 283 PHE PHE Y . n B 2 284 ILE 284 284 284 ILE ILE Y . n B 2 285 LEU 285 285 285 LEU LEU Y . n B 2 286 GLY 286 286 286 GLY GLY Y . n B 2 287 PHE 287 287 287 PHE PHE Y . n B 2 288 GLY 288 288 288 GLY GLY Y . n B 2 289 ALA 289 289 289 ALA ALA Y . n B 2 290 GLU 290 290 290 GLU GLU Y . n B 2 291 VAL 291 291 291 VAL VAL Y . n B 2 292 GLN 292 292 292 GLN GLN Y . n B 2 293 VAL 293 293 293 VAL VAL Y . n B 2 294 LEU 294 294 294 LEU LEU Y . n B 2 295 ALA 295 295 295 ALA ALA Y . n B 2 296 PRO 296 296 296 PRO PRO Y . n B 2 297 GLU 297 297 297 GLU GLU Y . n B 2 298 SER 298 298 298 SER SER Y . n B 2 299 LEU 299 299 299 LEU LEU Y . n B 2 300 ALA 300 300 300 ALA ALA Y . n B 2 301 THR 301 301 301 THR THR Y . n B 2 302 ARG 302 302 302 ARG ARG Y . n B 2 303 VAL 303 303 303 VAL VAL Y . n B 2 304 ARG 304 304 304 ARG ARG Y . n B 2 305 GLN 305 305 305 GLN GLN Y . n B 2 306 ALA 306 306 306 ALA ALA Y . n B 2 307 ALA 307 307 307 ALA ALA Y . n B 2 308 GLU 308 308 308 GLU GLU Y . n B 2 309 ALA 309 309 309 ALA ALA Y . n B 2 310 ALA 310 310 310 ALA ALA Y . n B 2 311 LEU 311 311 311 LEU LEU Y . n B 2 312 GLN 312 312 312 GLN GLN Y . n B 2 313 ALA 313 313 313 ALA ALA Y . n B 2 314 TYR 314 314 314 TYR TYR Y . n B 2 315 ALA 315 315 315 ALA ALA Y . n B 2 316 ARG 316 316 316 ARG ARG Y . n B 2 317 CYS 317 317 317 CYS CYS Y . n B 2 318 VAL 318 318 318 VAL VAL Y . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9FND _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9FND _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9FND _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9FND _struct.title 'Transcriptional activator PafBC bound to mycobacterial RNA polymerase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9FND _struct_keywords.text 'PafBC, sigma adaptation, WYL domain, transcriptional activator, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP I7G3U5_MYCS2 I7G3U5 ? 1 ;AVSKVERLMNLVIALLSTRTYLPAEKIRTTVAGYADSPSDEAFSRMFERDKNELRDLGIPLETGRVSKWDSTEGYRINRD SYALPPIGLTADEAAAVAVATQLWQSPELVTATQNAVLKLRAAGVDVDADGVGVAIASTATLPGVRGSEEVLQSLLSAID EGRAVQFEHRPSRSADYTTRTVEPWGVVTHRGRWYLVGHDRDREDTRTFRLSRISAAARPIGPAGAVQKPQDVNLRDIVR RAVAEQPTGERARIWIAGGRATALRRQAVTSTPRTIGGRAGEEITVDIGTWDRLAREIASYGSDAVALEPSSLRDDVVER LRAHAAGGER ; 2 2 UNP A0QZ41_MYCS2 A0QZ41 ? 2 ;MSQVSTRLVRLLNMVPYFQANPKVTRAEAAAALGVTGKQLDADLDQLWMCGLPGYSPGDLIDFDFVGDTIEVTFSAGVDH PLRLTSTEATGILVALRALVDVPGMVDPEAARSAIAKIESAVGSQRAVVEGITEDTSAEPGAAATVRTAVRENRALTLEY YSASRDSLATRTVDPIRVVLVGDNSYLEAWCRSAEAVRLFRFDRIVDAQLLDDPAAPPPPAVAAGPDTSLFDADPSLPSA TLLIGAAAAWMFDYYPLRDITERPDGSCEATMTYASEDWMARFILGFGAEVQVLAPESLATRVRQAAEAALQAYARCV ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9FND X 4 ? 333 ? I7G3U5 2 ? 331 ? 2 331 2 2 9FND Y 1 ? 318 ? A0QZ41 1 ? 318 ? 1 318 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9FND GLY X 1 ? UNP I7G3U5 ? ? 'expression tag' -1 1 1 9FND LEU X 2 ? UNP I7G3U5 ? ? 'expression tag' 0 2 1 9FND SER X 3 ? UNP I7G3U5 ? ? 'expression tag' 1 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'electron microscopy' ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 6 ? SER A 20 ? SER X 4 SER X 18 1 ? 15 HELX_P HELX_P2 AA2 PRO A 26 ? VAL A 34 ? PRO X 24 VAL X 32 1 ? 9 HELX_P HELX_P3 AA3 SER A 42 ? LEU A 60 ? SER X 40 LEU X 58 1 ? 19 HELX_P HELX_P4 AA4 ASN A 81 ? ALA A 86 ? ASN X 79 ALA X 84 1 ? 6 HELX_P HELX_P5 AA5 THR A 93 ? THR A 104 ? THR X 91 THR X 102 1 ? 12 HELX_P HELX_P6 AA6 SER A 109 ? GLY A 127 ? SER X 107 GLY X 125 1 ? 19 HELX_P HELX_P7 AA7 GLU A 152 ? GLY A 165 ? GLU X 150 GLY X 163 1 ? 14 HELX_P HELX_P8 AA8 ASN A 237 ? ALA A 247 ? ASN X 235 ALA X 245 1 ? 11 HELX_P HELX_P9 AA9 ALA A 264 ? GLN A 270 ? ALA X 262 GLN X 268 1 ? 7 HELX_P HELX_P10 AB1 THR A 293 ? GLY A 305 ? THR X 291 GLY X 303 1 ? 13 HELX_P HELX_P11 AB2 PRO A 313 ? ALA A 329 ? PRO X 311 ALA X 327 1 ? 17 HELX_P HELX_P12 AB3 GLN B 3 ? ASN B 21 ? GLN Y 3 ASN Y 21 1 ? 19 HELX_P HELX_P13 AB4 ARG B 26 ? GLY B 34 ? ARG Y 26 GLY Y 34 1 ? 9 HELX_P HELX_P14 AB5 THR B 36 ? MET B 49 ? THR Y 36 MET Y 49 1 ? 14 HELX_P HELX_P15 AB6 THR B 85 ? VAL B 100 ? THR Y 85 VAL Y 100 1 ? 16 HELX_P HELX_P16 AB7 ASP B 107 ? GLY B 123 ? ASP Y 107 GLY Y 123 1 ? 17 HELX_P HELX_P17 AB8 GLY B 141 ? ASN B 153 ? GLY Y 141 ASN Y 153 1 ? 13 HELX_P HELX_P18 AB9 PRO B 217 ? ALA B 223 ? PRO Y 217 ALA Y 223 1 ? 7 HELX_P HELX_P19 AC1 TRP B 250 ? TYR B 255 ? TRP Y 250 TYR Y 255 1 ? 6 HELX_P HELX_P20 AC2 SER B 276 ? GLY B 288 ? SER Y 276 GLY Y 288 1 ? 13 HELX_P HELX_P21 AC3 PRO B 296 ? CYS B 317 ? PRO Y 296 CYS Y 317 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 312 A . ? GLU 310 X PRO 313 A ? PRO 311 X 1 1.34 2 ALA 295 B . ? ALA 295 Y PRO 296 B ? PRO 296 Y 1 0.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 4 ? AA4 ? 2 ? AA5 ? 5 ? AA6 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 64 ? ARG A 68 ? LEU X 62 ARG X 66 AA1 2 GLU A 76 ? ILE A 80 ? GLU X 74 ILE X 78 AA2 1 THR A 209 ? ARG A 213 ? THR X 207 ARG X 211 AA2 2 ARG A 196 ? ASP A 203 ? ARG X 194 ASP X 201 AA2 3 THR A 181 ? HIS A 193 ? THR X 179 HIS X 191 AA2 4 ALA A 167 ? HIS A 172 ? ALA X 165 HIS X 170 AA2 5 ARG A 222 ? ILE A 224 ? ARG X 220 ILE X 222 AA3 1 THR A 273 ? ILE A 279 ? THR X 271 ILE X 277 AA3 2 ARG A 282 ? VAL A 289 ? ARG X 280 VAL X 287 AA3 3 ALA A 255 ? ALA A 260 ? ALA X 253 ALA X 258 AA3 4 ALA A 308 ? GLU A 312 ? ALA X 306 GLU X 310 AA4 1 VAL B 24 ? THR B 25 ? VAL Y 24 THR Y 25 AA4 2 THR B 69 ? ILE B 70 ? THR Y 69 ILE Y 70 AA5 1 ALA B 196 ? ARG B 201 ? ALA Y 196 ARG Y 201 AA5 2 ASN B 184 ? CYS B 191 ? ASN Y 184 CYS Y 191 AA5 3 SER B 167 ? VAL B 181 ? SER Y 167 VAL Y 181 AA5 4 LEU B 156 ? SER B 162 ? LEU Y 156 SER Y 162 AA5 5 ILE B 205 ? LEU B 210 ? ILE Y 205 LEU Y 210 AA6 1 ALA B 270 ? THR B 273 ? ALA Y 270 THR Y 273 AA6 2 SER B 239 ? ILE B 244 ? SER Y 239 ILE Y 244 AA6 3 VAL B 291 ? ALA B 295 ? VAL Y 291 ALA Y 295 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 65 ? N GLU X 63 O ARG A 79 ? O ARG X 77 AA2 1 2 O ARG A 210 ? O ARG X 208 N GLY A 201 ? N GLY X 199 AA2 2 3 O HIS A 202 ? O HIS X 200 N GLU A 186 ? N GLU X 184 AA2 3 4 O VAL A 185 ? O VAL X 183 N VAL A 168 ? N VAL X 166 AA2 4 5 N ALA A 167 ? N ALA X 165 O ILE A 224 ? O ILE X 222 AA3 1 2 N THR A 275 ? N THR X 273 O GLU A 286 ? O GLU X 284 AA3 2 3 O ILE A 287 ? O ILE X 285 N ILE A 257 ? N ILE X 255 AA3 3 4 N TRP A 258 ? N TRP X 256 O VAL A 309 ? O VAL X 307 AA4 1 2 N VAL B 24 ? N VAL Y 24 O ILE B 70 ? O ILE Y 70 AA5 1 2 O ALA B 196 ? O ALA Y 196 N CYS B 191 ? N CYS Y 191 AA5 2 3 O TRP B 190 ? O TRP Y 190 N ASP B 174 ? N ASP Y 174 AA5 3 4 O ALA B 169 ? O ALA Y 169 N TYR B 160 ? N TYR Y 160 AA5 4 5 N THR B 157 ? N THR Y 157 O GLN B 209 ? O GLN Y 209 AA6 1 2 O ALA B 270 ? O ALA Y 270 N LEU B 242 ? N LEU Y 242 AA6 2 3 N LEU B 243 ? N LEU Y 243 O GLN B 292 ? O GLN Y 292 # _pdbx_entry_details.entry_id 9FND _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL X 146 ? ? -92.01 -61.54 2 1 MET Y 49 ? ? -99.10 36.37 3 1 ARG Y 126 ? ? -67.71 1.51 4 1 SER Y 137 ? ? 59.23 8.90 5 1 ILE Y 176 ? ? -121.12 -54.89 6 1 VAL Y 222 ? ? -120.04 -65.22 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9FND _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name AlphaFold _em_3d_fitting_list.type 'in silico model' _em_3d_fitting_list.accession_code ? _em_3d_fitting_list.initial_refinement_model_id ? # _em_3d_reconstruction.entry_id 9FND _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4.0 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 154302 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 RECOMBINANT COMPLEX 'Transcriptional activator PafBC bound to mycobacterial RNA polymerase' ? ? ? '1, 2' 2 1 RECOMBINANT COMPLEX PafBC ? ? ? '1, 2' 3 1 NATURAL COMPLEX 'DNA-directed RNA polymerase' ? ? ? ? 4 1 RECOMBINANT COMPLEX 'RNAP polymerase sigma factor A and RNA polymerase-binding protein RbpA' ? ? ? ? # _em_imaging.entry_id 9FND _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 3000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R2/2' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9FND _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE-PROPANE _em_vitrification.humidity 95 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277.15 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9FND _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9FND _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 X GLY -1 ? A GLY 1 2 1 Y 1 X LEU 0 ? A LEU 2 3 1 Y 1 X SER 1 ? A SER 3 4 1 Y 1 Y MET 1 ? B MET 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2024-06-10 _em_admin.deposition_site PDBE _em_admin.entry_id 9FND _em_admin.last_update 2025-02-19 _em_admin.map_release_date 2025-02-12 _em_admin.title 'Transcriptional activator PafBC bound to mycobacterial RNA polymerase' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_molwt.entity_assembly_id _em_entity_assembly_molwt.experimental_flag _em_entity_assembly_molwt.id _em_entity_assembly_molwt.units _em_entity_assembly_molwt.value 1 NO 1 ? ? 2 ? 2 ? ? 3 ? 3 ? ? 4 ? 4 ? ? # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 1 2 246196 'Mycolicibacterium smegmatis MC2 155' ? ? ? ? ? ? ? 2 3 246196 'Mycolicibacterium smegmatis MC2 155' ? ? ? ? ? ? ? 3 4 246196 'Mycolicibacterium smegmatis MC2 155' ? ? ? ? ? ? ? 4 5 246196 'Mycolicibacterium smegmatis MC2 155' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 1 2 469008 'Escherichia coli BL21(DE3)' ? ? ? 2 3 469008 'Escherichia coli BL21(DE3)' ? ? ? 3 4 469008 'Escherichia coli BL21(DE3)' ? ? ? 4 5 469008 'Escherichia coli BL21(DE3)' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 78 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION 3DFlex 13 1 ? ? cryoSPARC ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Swiss National Science Foundation' _pdbx_audit_support.country Switzerland _pdbx_audit_support.grant_number 310030_215606 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? # _atom_sites.entry_id 9FND _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #