data_9G4P # _entry.id 9G4P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9G4P pdb_00009g4p 10.2210/pdb9g4p/pdb WWPDB D_1292140336 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-07-30 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9G4P _pdbx_database_status.recvd_initial_deposition_date 2024-07-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 d.m.j.lilley@dundee.ac.uk David Lilley M.J 'principal investigator/group leader' 0000-0001-6882-2818 3 huanglin36@mail.sysu.edu.cn Lin Huang ? 'principal investigator/group leader' 0000-0002-2121-365X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Huang, L.' 1 ? 'Lilley, D.M.J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural basis for tRNA-mimicking by skipping-rope RNA motif' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, L.' 1 ? primary 'Lilley, D.M.J.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (33-MER)' 11431.743 1 ? ? ? ? 2 polymer syn 'RNA (33-MER)' 10601.338 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes 'GGUAUAGAGGAUGGAACGGGCAGCCAUCGCC(CBV)GCC' GGUAUAGAGGAUGGAACGGGCAGCCAUCGCCCGCC A ? 2 polyribonucleotide no no GGCGGGAGAUGAGGAUUGUCACCCUCCUAUACC GGCGGGAGAUGAGGAUUGUCACCCUCCUAUACC B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'MAGNESIUM ION' _pdbx_entity_nonpoly.comp_id MG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 A n 1 5 U n 1 6 A n 1 7 G n 1 8 A n 1 9 G n 1 10 G n 1 11 A n 1 12 U n 1 13 G n 1 14 G n 1 15 A n 1 16 A n 1 17 C n 1 18 G n 1 19 G n 1 20 G n 1 21 C n 1 22 A n 1 23 G n 1 24 C n 1 25 C n 1 26 A n 1 27 U n 1 28 C n 1 29 G n 1 30 C n 1 31 C n 1 32 CBV n 1 33 G n 1 34 C n 1 35 C n 2 1 G n 2 2 G n 2 3 C n 2 4 G n 2 5 G n 2 6 G n 2 7 A n 2 8 G n 2 9 A n 2 10 U n 2 11 G n 2 12 A n 2 13 G n 2 14 G n 2 15 A n 2 16 U n 2 17 U n 2 18 G n 2 19 U n 2 20 C n 2 21 A n 2 22 C n 2 23 C n 2 24 C n 2 25 U n 2 26 C n 2 27 C n 2 28 U n 2 29 A n 2 30 U n 2 31 A n 2 32 C n 2 33 C n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 35 bacterium ? 1869227 ? 2 1 sample 1 33 bacterium ? 1869227 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CBV 'RNA linking' n ;5-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE) ; ? 'C9 H13 Br N3 O8 P' 402.093 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 U 3 3 3 U U A . n A 1 4 A 4 4 4 A A A . n A 1 5 U 5 5 5 U U A . n A 1 6 A 6 6 6 A A A . n A 1 7 G 7 7 7 G G A . n A 1 8 A 8 8 8 A A A . n A 1 9 G 9 9 9 G G A . n A 1 10 G 10 10 10 G G A . n A 1 11 A 11 11 11 A A A . n A 1 12 U 12 12 12 U U A . n A 1 13 G 13 13 13 G G A . n A 1 14 G 14 14 14 G G A . n A 1 15 A 15 15 15 A A A . n A 1 16 A 16 16 16 A A A . n A 1 17 C 17 17 ? ? ? A . n A 1 18 G 18 18 ? ? ? A . n A 1 19 G 19 19 19 G G A . n A 1 20 G 20 20 20 G G A . n A 1 21 C 21 21 21 C C A . n A 1 22 A 22 22 22 A A A . n A 1 23 G 23 23 23 G G A . n A 1 24 C 24 24 24 C C A . n A 1 25 C 25 25 25 C C A . n A 1 26 A 26 26 26 A A A . n A 1 27 U 27 27 27 U U A . n A 1 28 C 28 28 28 C C A . n A 1 29 G 29 29 29 G G A . n A 1 30 C 30 30 30 C C A . n A 1 31 C 31 31 31 C C A . n A 1 32 CBV 32 32 32 CBV CBV A . n A 1 33 G 33 33 33 G G A . n A 1 34 C 34 34 34 C C A . n A 1 35 C 35 35 35 C C A . n B 2 1 G 1 1 1 G G B . n B 2 2 G 2 2 2 G G B . n B 2 3 C 3 3 3 C C B . n B 2 4 G 4 4 4 G G B . n B 2 5 G 5 5 5 G G B . n B 2 6 G 6 6 6 G G B . n B 2 7 A 7 7 7 A A B . n B 2 8 G 8 8 8 G G B . n B 2 9 A 9 9 9 A A B . n B 2 10 U 10 10 10 U U B . n B 2 11 G 11 11 11 G G B . n B 2 12 A 12 12 12 A A B . n B 2 13 G 13 13 13 G G B . n B 2 14 G 14 14 14 G G B . n B 2 15 A 15 15 15 A A B . n B 2 16 U 16 16 16 U U B . n B 2 17 U 17 17 17 U U B . n B 2 18 G 18 18 18 G G B . n B 2 19 U 19 19 19 U U B . n B 2 20 C 20 20 20 C C B . n B 2 21 A 21 21 21 A A B . n B 2 22 C 22 22 22 C C B . n B 2 23 C 23 23 23 C C B . n B 2 24 C 24 24 24 C C B . n B 2 25 U 25 25 25 U U B . n B 2 26 C 26 26 26 C C B . n B 2 27 C 27 27 27 C C B . n B 2 28 U 28 28 28 U U B . n B 2 29 A 29 29 29 A A B . n B 2 30 U 30 30 30 U U B . n B 2 31 A 31 31 31 A A B . n B 2 32 C 32 32 32 C C B . n B 2 33 C 33 33 33 C C B . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 CBV ? ? CBV ? ? 'SUBJECT OF INVESTIGATION' ? 2 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 101 101 MG MG A . D 3 MG 1 102 102 MG MG A . E 3 MG 1 101 101 MG MG B . F 3 MG 1 102 102 MG MG B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.13_2998: ???)' 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 9G4P _cell.details ? _cell.formula_units_Z ? _cell.length_a 113.478 _cell.length_a_esd ? _cell.length_b 113.478 _cell.length_b_esd ? _cell.length_c 59.286 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9G4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9G4P _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 5.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 75.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.001M Spermine tetrahydrochloride 0.05M MES6.5 30% v/v PEG 400 ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 290 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-02-02 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9196 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9196 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9G4P _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.90 _reflns.d_resolution_low 98.28 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18131 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 2.25 _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 19.74 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.48 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.022 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.00 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.095 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 2.95 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 473 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 20.1 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.247 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.280 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.091 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9G4P _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.90 _refine.ls_d_res_low 37.83 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18131 _refine.ls_number_reflns_R_free 882 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.8 _refine.ls_percent_reflns_R_free 4.860 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.195 _refine.ls_R_factor_R_free 0.232 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.193 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.330 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.060 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.560 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 37.83 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1415 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1411 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 1577 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.822 ? 2455 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 12.840 ? 781 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.041 ? 327 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 66 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.9000 3.0816 . . 124 2440 81.00 . . . . 0.5235 . . . . . . . . . . . 0.5504 'X-RAY DIFFRACTION' 3.0816 3.3194 . . 169 2848 96.00 . . . . 0.3524 . . . . . . . . . . . 0.3888 'X-RAY DIFFRACTION' 3.3194 3.6532 . . 122 3003 99.00 . . . . 0.2694 . . . . . . . . . . . 0.2738 'X-RAY DIFFRACTION' 3.6532 4.1813 . . 168 2958 99.00 . . . . 0.1745 . . . . . . . . . . . 0.2241 'X-RAY DIFFRACTION' 4.1813 5.2657 . . 172 2972 100.00 . . . . 0.1546 . . . . . . . . . . . 0.1996 'X-RAY DIFFRACTION' 5.2657 37.83 . . 127 3028 100.00 . . . . 0.1519 . . . . . . . . . . . 0.1774 # _struct.entry_id 9G4P _struct.title 'Crystal structure of the skipping-rope RNA motif.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9G4P _struct_keywords.text 'RNA structure; tRNA-mimicking; X-ray crystallography, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9G4P 9G4P ? 1 ? 1 2 PDB 9G4P 9G4P ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9G4P A 1 ? 35 ? 9G4P 1 ? 35 ? 1 35 2 2 9G4P B 1 ? 33 ? 9G4P 1 ? 33 ? 1 33 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3940 ? 1 MORE -47 ? 1 'SSA (A^2)' 10410 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A C 31 "O3'" ? ? ? 1_555 A CBV 32 P ? ? A C 31 A CBV 32 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale2 covale one ? A CBV 32 "O3'" ? ? ? 1_555 A G 33 P ? ? A CBV 32 A G 33 1_555 ? ? ? ? ? ? ? 1.605 ? ? metalc1 metalc ? ? A G 9 OP2 ? ? ? 1_555 C MG . MG ? ? A G 9 A MG 101 1_555 ? ? ? ? ? ? ? 1.991 ? ? metalc2 metalc ? ? A G 20 O6 ? ? ? 1_555 D MG . MG ? ? A G 20 A MG 102 1_555 ? ? ? ? ? ? ? 2.452 ? ? metalc3 metalc ? ? B G 11 OP1 ? ? ? 1_555 E MG . MG ? ? B G 11 B MG 101 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc4 metalc ? ? B A 21 OP1 ? ? ? 1_555 E MG . MG ? ? B A 21 B MG 101 1_555 ? ? ? ? ? ? ? 2.393 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 33 N3 ? ? A G 1 B C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 33 O2 ? ? A G 1 B C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 33 N4 ? ? A G 1 B C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 B C 32 N3 ? ? A G 2 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 B C 32 O2 ? ? A G 2 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 B C 32 N4 ? ? A G 2 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 B A 31 N1 ? ? A U 3 B A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 ? ? ? 1_555 B A 31 N6 ? ? A U 3 B A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A A 4 N1 ? ? ? 1_555 B U 30 N3 ? ? A A 4 B U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A A 4 N6 ? ? ? 1_555 B U 30 O4 ? ? A A 4 B U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 5 N3 ? ? ? 1_555 B A 29 N1 ? ? A U 5 B A 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 5 O4 ? ? ? 1_555 B A 29 N6 ? ? A U 5 B A 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 6 N1 ? ? ? 1_555 B U 28 N3 ? ? A A 6 B U 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 6 N6 ? ? ? 1_555 B U 28 O4 ? ? A A 6 B U 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 7 N1 ? ? ? 1_555 B C 27 N3 ? ? A G 7 B C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N2 ? ? ? 1_555 B C 27 O2 ? ? A G 7 B C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 O6 ? ? ? 1_555 B C 27 N4 ? ? A G 7 B C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 28 N3 ? ? A G 10 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 28 O2 ? ? A G 10 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 28 N4 ? ? A G 10 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 10 O6 ? ? ? 1_555 B G 8 N2 ? ? A G 10 B G 8 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog22 hydrog ? ? A A 11 N1 ? ? ? 1_555 A U 27 N3 ? ? A A 11 A U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A A 11 N6 ? ? ? 1_555 A U 27 O4 ? ? A A 11 A U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 26 N1 ? ? A U 12 A A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 26 N6 ? ? A U 12 A A 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 25 N3 ? ? A G 13 A C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 25 O2 ? ? A G 13 A C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 25 N4 ? ? A G 13 A C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 24 N3 ? ? A G 14 A C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 24 O2 ? ? A G 14 A C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 24 N4 ? ? A G 14 A C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A A 15 N6 ? ? ? 1_555 B U 10 O2 ? ? A A 15 B U 10 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog33 hydrog ? ? A A 16 N1 ? ? ? 1_555 A G 19 N2 ? ? A A 16 A G 19 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog34 hydrog ? ? A G 19 N1 ? ? ? 1_555 B C 20 N3 ? ? A G 19 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 19 N2 ? ? ? 1_555 B C 20 O2 ? ? A G 19 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 19 O6 ? ? ? 1_555 B C 20 N4 ? ? A G 19 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 20 N2 ? ? ? 1_555 B U 10 O4 ? ? A G 20 B U 10 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog38 hydrog ? ? A G 20 N1 ? ? ? 1_555 B U 19 O2 ? ? A G 20 B U 19 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog39 hydrog ? ? A G 20 O6 ? ? ? 1_555 B U 19 N3 ? ? A G 20 B U 19 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog40 hydrog ? ? A C 21 N3 ? ? ? 1_555 B G 18 N1 ? ? A C 21 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 21 N4 ? ? ? 1_555 B G 18 O6 ? ? A C 21 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 21 O2 ? ? ? 1_555 B G 18 N2 ? ? A C 21 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 29 N1 ? ? ? 1_555 B A 7 N1 ? ? A G 29 B A 7 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog44 hydrog ? ? A G 29 O6 ? ? ? 1_555 B A 7 N6 ? ? A G 29 B A 7 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog45 hydrog ? ? A C 30 N3 ? ? ? 1_555 B G 6 N1 ? ? A C 30 B G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 30 N4 ? ? ? 1_555 B G 6 O6 ? ? A C 30 B G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 30 O2 ? ? ? 1_555 B G 6 N2 ? ? A C 30 B G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 31 N3 ? ? ? 1_555 B G 5 N1 ? ? A C 31 B G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 31 N4 ? ? ? 1_555 B G 5 O6 ? ? A C 31 B G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 31 O2 ? ? ? 1_555 B G 5 N2 ? ? A C 31 B G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A CBV 32 N3 ? ? ? 1_555 B G 4 N1 ? ? A CBV 32 B G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A CBV 32 N4 ? ? ? 1_555 B G 4 O6 ? ? A CBV 32 B G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A CBV 32 O2 ? ? ? 1_555 B G 4 N2 ? ? A CBV 32 B G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 33 N1 ? ? ? 1_555 B C 3 N3 ? ? A G 33 B C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 33 N2 ? ? ? 1_555 B C 3 O2 ? ? A G 33 B C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 33 O6 ? ? ? 1_555 B C 3 N4 ? ? A G 33 B C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 34 N3 ? ? ? 1_555 B G 2 N1 ? ? A C 34 B G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 34 N4 ? ? ? 1_555 B G 2 O6 ? ? A C 34 B G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A C 34 O2 ? ? ? 1_555 B G 2 N2 ? ? A C 34 B G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 35 N3 ? ? ? 1_555 B G 1 N1 ? ? A C 35 B G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 35 N4 ? ? ? 1_555 B G 1 O6 ? ? A C 35 B G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 35 O2 ? ? ? 1_555 B G 1 N2 ? ? A C 35 B G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 26 N3 ? ? B G 11 B C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 26 O2 ? ? B G 11 B C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 26 N4 ? ? B G 11 B C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B A 12 N1 ? ? ? 1_555 B U 25 N3 ? ? B A 12 B U 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B A 12 N6 ? ? ? 1_555 B U 25 O4 ? ? B A 12 B U 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B G 13 N1 ? ? ? 1_555 B C 24 N3 ? ? B G 13 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B G 13 N2 ? ? ? 1_555 B C 24 O2 ? ? B G 13 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B G 13 O6 ? ? ? 1_555 B C 24 N4 ? ? B G 13 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 14 N1 ? ? ? 1_555 B C 23 N3 ? ? B G 14 B C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B G 14 N2 ? ? ? 1_555 B C 23 O2 ? ? B G 14 B C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B G 14 O6 ? ? ? 1_555 B C 23 N4 ? ? B G 14 B C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OP1 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id G _pdbx_struct_conn_angle.ptnr1_label_seq_id 11 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id B _pdbx_struct_conn_angle.ptnr1_auth_comp_id G _pdbx_struct_conn_angle.ptnr1_auth_seq_id 11 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id E _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id B _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 101 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id OP1 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id B _pdbx_struct_conn_angle.ptnr3_label_comp_id A _pdbx_struct_conn_angle.ptnr3_label_seq_id 21 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id B _pdbx_struct_conn_angle.ptnr3_auth_comp_id A _pdbx_struct_conn_angle.ptnr3_auth_seq_id 21 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 85.9 _pdbx_struct_conn_angle.value_esd ? # _pdbx_entry_details.entry_id 9G4P _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C6 _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 C _pdbx_validate_rmsd_angle.auth_seq_id_1 24 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N1 _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 C _pdbx_validate_rmsd_angle.auth_seq_id_2 24 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 C _pdbx_validate_rmsd_angle.auth_seq_id_3 24 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.85 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -2.45 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.40 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -24.7399 56.4102 2.5620 0.9438 ? -0.0969 ? 0.0754 ? 0.9400 ? -0.0410 ? 1.1220 ? 0.3128 ? -0.1677 ? 0.3042 ? 4.6183 ? -4.5562 ? 3.0899 ? 0.0460 ? -0.3409 ? 0.2195 ? -0.0992 ? 0.3171 ? 0.0487 ? -0.2503 ? 0.1424 ? -0.3439 ? 2 'X-RAY DIFFRACTION' ? refined -16.0542 45.8979 3.4958 1.0812 ? 0.0603 ? -0.1061 ? 1.6455 ? 0.2743 ? 0.9211 ? 4.6195 ? 0.1886 ? -3.6992 ? 7.6317 ? -2.3870 ? 3.5207 ? -0.1855 ? 2.3854 ? 0.8185 ? -1.7748 ? 0.2060 ? 0.3653 ? -0.4780 ? -0.9098 ? 0.1437 ? 3 'X-RAY DIFFRACTION' ? refined -25.5153 36.3115 12.3595 1.1439 ? -0.1137 ? 0.0183 ? 1.3452 ? -0.1607 ? 1.4093 ? 2.0705 ? 3.0486 ? -1.0520 ? 9.9286 ? 1.1741 ? 9.8123 ? -0.1902 ? 0.8359 ? -2.1522 ? -1.3212 ? -0.0649 ? 0.3621 ? 1.3668 ? -1.0459 ? 0.1006 ? 4 'X-RAY DIFFRACTION' ? refined -3.5509 38.1426 16.7998 0.8992 ? 0.0781 ? 0.0229 ? 1.1216 ? 0.0197 ? 1.3184 ? 6.6633 ? -1.2234 ? 0.9580 ? 3.6941 ? -2.2224 ? 6.5053 ? -0.1906 ? 0.4003 ? 0.0961 ? 0.4853 ? -0.5615 ? -0.7678 ? 0.0544 ? 1.1347 ? 0.7801 ? 5 'X-RAY DIFFRACTION' ? refined -7.2119 36.6779 18.2060 0.8657 ? -0.1000 ? -0.1027 ? 1.0995 ? -0.0757 ? 1.3000 ? 6.6534 ? -1.2294 ? -1.7445 ? 4.9474 ? -0.8086 ? 2.4752 ? -0.1408 ? 0.6332 ? -2.2150 ? 0.5164 ? -0.1960 ? 0.4304 ? 0.1161 ? 0.4370 ? 0.3248 ? 6 'X-RAY DIFFRACTION' ? refined -30.6649 55.7194 14.9032 1.1939 ? 0.2131 ? 0.0915 ? 1.4226 ? 0.0991 ? 1.2425 ? 4.5900 ? 3.6134 ? -6.3209 ? 7.4525 ? -2.4880 ? 9.8197 ? -0.9301 ? -1.3646 ? 0.4587 ? 1.0982 ? 1.1330 ? 1.4493 ? 0.3236 ? -0.0399 ? -0.1209 ? 7 'X-RAY DIFFRACTION' ? refined -33.2853 43.8232 18.0329 0.8728 ? 0.0637 ? 0.1765 ? 1.3418 ? 0.1899 ? 1.3483 ? 6.1065 ? 4.2822 ? -4.1784 ? 3.8277 ? -3.6584 ? 3.3774 ? 0.3737 ? 1.5389 ? -0.3932 ? 0.4920 ? 0.3481 ? 1.6668 ? -0.8918 ? -2.3375 ? -0.8820 ? 8 'X-RAY DIFFRACTION' ? refined -35.1150 52.6300 8.0101 1.1673 ? 0.1323 ? -0.0943 ? 1.7831 ? 0.3632 ? 1.6071 ? 2.1726 ? -3.2216 ? -0.0017 ? 4.9001 ? -0.1215 ? 0.1467 ? -0.5423 ? 0.4382 ? 0.4654 ? -0.3966 ? 1.1223 ? 2.6151 ? -0.3768 ? 0.3714 ? -0.6225 ? 9 'X-RAY DIFFRACTION' ? refined -24.9449 65.4110 -1.1595 0.9104 ? -0.1448 ? -0.0608 ? 1.0154 ? 0.0616 ? 1.0972 ? 3.0650 ? -2.1512 ? 2.8208 ? 3.2460 ? -1.4198 ? 2.7821 ? -0.1354 ? 0.2250 ? 0.7045 ? 0.4497 ? 0.3149 ? -0.4399 ? -1.3694 ? 0.4725 ? -0.2461 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 1 THROUGH 10 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 11 THROUGH 16 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 19 THROUGH 23 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 24 THROUGH 35 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 1 THROUGH 10 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 11 THROUGH 15 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 16 THROUGH 20 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 21 THROUGH 25 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 26 THROUGH 33 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A C 17 ? A C 17 2 1 Y 1 A G 18 ? A G 18 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CBV O3P O N N 73 CBV P P N N 74 CBV O1P O N N 75 CBV O2P O N N 76 CBV "O5'" O N N 77 CBV "C5'" C N N 78 CBV "C4'" C N R 79 CBV "O4'" O N N 80 CBV "C3'" C N S 81 CBV "O3'" O N N 82 CBV "C2'" C N R 83 CBV "O2'" O N N 84 CBV "C1'" C N R 85 CBV N1 N N N 86 CBV C2 C N N 87 CBV O2 O N N 88 CBV N3 N N N 89 CBV C4 C N N 90 CBV N4 N N N 91 CBV C5 C N N 92 CBV C6 C N N 93 CBV BR BR N N 94 CBV HO3P H N N 95 CBV HO1P H N N 96 CBV "H5'1" H N N 97 CBV "H5'2" H N N 98 CBV "H4'" H N N 99 CBV "H3'" H N N 100 CBV "HO3'" H N N 101 CBV "H2'" H N N 102 CBV "HO2'" H N N 103 CBV "H1'" H N N 104 CBV HN41 H N N 105 CBV HN42 H N N 106 CBV H6 H N N 107 G OP3 O N N 108 G P P N N 109 G OP1 O N N 110 G OP2 O N N 111 G "O5'" O N N 112 G "C5'" C N N 113 G "C4'" C N R 114 G "O4'" O N N 115 G "C3'" C N S 116 G "O3'" O N N 117 G "C2'" C N R 118 G "O2'" O N N 119 G "C1'" C N R 120 G N9 N Y N 121 G C8 C Y N 122 G N7 N Y N 123 G C5 C Y N 124 G C6 C N N 125 G O6 O N N 126 G N1 N N N 127 G C2 C N N 128 G N2 N N N 129 G N3 N N N 130 G C4 C Y N 131 G HOP3 H N N 132 G HOP2 H N N 133 G "H5'" H N N 134 G "H5''" H N N 135 G "H4'" H N N 136 G "H3'" H N N 137 G "HO3'" H N N 138 G "H2'" H N N 139 G "HO2'" H N N 140 G "H1'" H N N 141 G H8 H N N 142 G H1 H N N 143 G H21 H N N 144 G H22 H N N 145 MG MG MG N N 146 U OP3 O N N 147 U P P N N 148 U OP1 O N N 149 U OP2 O N N 150 U "O5'" O N N 151 U "C5'" C N N 152 U "C4'" C N R 153 U "O4'" O N N 154 U "C3'" C N S 155 U "O3'" O N N 156 U "C2'" C N R 157 U "O2'" O N N 158 U "C1'" C N R 159 U N1 N N N 160 U C2 C N N 161 U O2 O N N 162 U N3 N N N 163 U C4 C N N 164 U O4 O N N 165 U C5 C N N 166 U C6 C N N 167 U HOP3 H N N 168 U HOP2 H N N 169 U "H5'" H N N 170 U "H5''" H N N 171 U "H4'" H N N 172 U "H3'" H N N 173 U "HO3'" H N N 174 U "H2'" H N N 175 U "HO2'" H N N 176 U "H1'" H N N 177 U H3 H N N 178 U H5 H N N 179 U H6 H N N 180 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 CBV O3P P sing N N 76 CBV O3P HO3P sing N N 77 CBV P O1P sing N N 78 CBV P O2P doub N N 79 CBV P "O5'" sing N N 80 CBV O1P HO1P sing N N 81 CBV "O5'" "C5'" sing N N 82 CBV "C5'" "C4'" sing N N 83 CBV "C5'" "H5'1" sing N N 84 CBV "C5'" "H5'2" sing N N 85 CBV "C4'" "O4'" sing N N 86 CBV "C4'" "C3'" sing N N 87 CBV "C4'" "H4'" sing N N 88 CBV "O4'" "C1'" sing N N 89 CBV "C3'" "O3'" sing N N 90 CBV "C3'" "C2'" sing N N 91 CBV "C3'" "H3'" sing N N 92 CBV "O3'" "HO3'" sing N N 93 CBV "C2'" "O2'" sing N N 94 CBV "C2'" "C1'" sing N N 95 CBV "C2'" "H2'" sing N N 96 CBV "O2'" "HO2'" sing N N 97 CBV "C1'" N1 sing N N 98 CBV "C1'" "H1'" sing N N 99 CBV N1 C2 sing N N 100 CBV N1 C6 sing N N 101 CBV C2 O2 doub N N 102 CBV C2 N3 sing N N 103 CBV N3 C4 doub N N 104 CBV C4 N4 sing N N 105 CBV C4 C5 sing N N 106 CBV N4 HN41 sing N N 107 CBV N4 HN42 sing N N 108 CBV C5 C6 doub N N 109 CBV C5 BR sing N N 110 CBV C6 H6 sing N N 111 G OP3 P sing N N 112 G OP3 HOP3 sing N N 113 G P OP1 doub N N 114 G P OP2 sing N N 115 G P "O5'" sing N N 116 G OP2 HOP2 sing N N 117 G "O5'" "C5'" sing N N 118 G "C5'" "C4'" sing N N 119 G "C5'" "H5'" sing N N 120 G "C5'" "H5''" sing N N 121 G "C4'" "O4'" sing N N 122 G "C4'" "C3'" sing N N 123 G "C4'" "H4'" sing N N 124 G "O4'" "C1'" sing N N 125 G "C3'" "O3'" sing N N 126 G "C3'" "C2'" sing N N 127 G "C3'" "H3'" sing N N 128 G "O3'" "HO3'" sing N N 129 G "C2'" "O2'" sing N N 130 G "C2'" "C1'" sing N N 131 G "C2'" "H2'" sing N N 132 G "O2'" "HO2'" sing N N 133 G "C1'" N9 sing N N 134 G "C1'" "H1'" sing N N 135 G N9 C8 sing Y N 136 G N9 C4 sing Y N 137 G C8 N7 doub Y N 138 G C8 H8 sing N N 139 G N7 C5 sing Y N 140 G C5 C6 sing N N 141 G C5 C4 doub Y N 142 G C6 O6 doub N N 143 G C6 N1 sing N N 144 G N1 C2 sing N N 145 G N1 H1 sing N N 146 G C2 N2 sing N N 147 G C2 N3 doub N N 148 G N2 H21 sing N N 149 G N2 H22 sing N N 150 G N3 C4 sing N N 151 U OP3 P sing N N 152 U OP3 HOP3 sing N N 153 U P OP1 doub N N 154 U P OP2 sing N N 155 U P "O5'" sing N N 156 U OP2 HOP2 sing N N 157 U "O5'" "C5'" sing N N 158 U "C5'" "C4'" sing N N 159 U "C5'" "H5'" sing N N 160 U "C5'" "H5''" sing N N 161 U "C4'" "O4'" sing N N 162 U "C4'" "C3'" sing N N 163 U "C4'" "H4'" sing N N 164 U "O4'" "C1'" sing N N 165 U "C3'" "O3'" sing N N 166 U "C3'" "C2'" sing N N 167 U "C3'" "H3'" sing N N 168 U "O3'" "HO3'" sing N N 169 U "C2'" "O2'" sing N N 170 U "C2'" "C1'" sing N N 171 U "C2'" "H2'" sing N N 172 U "O2'" "HO2'" sing N N 173 U "C1'" N1 sing N N 174 U "C1'" "H1'" sing N N 175 U N1 C2 sing N N 176 U N1 C6 sing N N 177 U C2 O2 doub N N 178 U C2 N3 sing N N 179 U N3 C4 sing N N 180 U N3 H3 sing N N 181 U C4 O4 doub N N 182 U C4 C5 sing N N 183 U C5 C6 doub N N 184 U C5 H5 sing N N 185 U C6 H6 sing N N 186 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9G4P 'double helix' 9G4P 'a-form double helix' 9G4P 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 33 1_555 -0.225 -0.164 -0.177 -9.096 -6.278 0.732 1 A_G1:C33_B A 1 ? B 33 ? 19 1 1 A G 2 1_555 B C 32 1_555 -0.209 -0.124 0.057 -8.378 -0.286 2.504 2 A_G2:C32_B A 2 ? B 32 ? 19 1 1 A U 3 1_555 B A 31 1_555 0.012 -0.017 -0.131 -4.344 -2.462 4.253 3 A_U3:A31_B A 3 ? B 31 ? 20 1 1 A A 4 1_555 B U 30 1_555 0.025 -0.063 0.604 4.234 -2.877 5.057 4 A_A4:U30_B A 4 ? B 30 ? 20 1 1 A U 5 1_555 B A 29 1_555 0.122 -0.117 0.291 8.566 -2.265 3.955 5 A_U5:A29_B A 5 ? B 29 ? 20 1 1 A A 6 1_555 B U 28 1_555 0.059 -0.010 -0.018 -4.066 -8.555 3.148 6 A_A6:U28_B A 6 ? B 28 ? 20 1 1 A G 7 1_555 B C 27 1_555 -0.212 -0.053 0.176 6.435 -0.176 -0.893 7 A_G7:C27_B A 7 ? B 27 ? 19 1 1 B G 11 1_555 B C 26 1_555 -0.169 -0.175 -0.083 -5.072 -3.507 1.069 8 B_G11:C26_B B 11 ? B 26 ? 19 1 1 B A 12 1_555 B U 25 1_555 0.074 -0.109 -0.121 -6.934 0.938 1.380 9 B_A12:U25_B B 12 ? B 25 ? 20 1 1 B G 13 1_555 B C 24 1_555 -0.246 -0.160 -0.147 -2.474 0.053 1.668 10 B_G13:C24_B B 13 ? B 24 ? 19 1 1 B G 14 1_555 B C 23 1_555 -0.126 -0.105 0.086 -9.902 5.803 1.428 11 B_G14:C23_B B 14 ? B 23 ? 19 1 1 B G 1 1_555 A C 35 1_555 -0.211 -0.194 0.228 -3.403 -8.430 0.981 12 B_G1:C35_A B 1 ? A 35 ? 19 1 1 B G 2 1_555 A C 34 1_555 -0.168 -0.227 0.545 0.619 -3.830 1.538 13 B_G2:C34_A B 2 ? A 34 ? 19 1 1 B C 3 1_555 A G 33 1_555 0.204 -0.180 0.292 -1.481 -2.285 0.912 14 B_C3:G33_A B 3 ? A 33 ? 19 1 1 B G 4 1_555 A CBV 32 1_555 0.363 -0.353 -0.024 -6.684 -10.851 -4.896 15 B_G4:CBV32_A B 4 ? A 32 ? 19 1 1 B G 5 1_555 A C 31 1_555 -0.212 -0.114 0.101 -4.262 -7.113 1.080 16 B_G5:C31_A B 5 ? A 31 ? 19 1 1 B G 6 1_555 A C 30 1_555 -0.183 -0.146 0.320 -10.314 -9.338 -1.407 17 B_G6:C30_A B 6 ? A 30 ? 19 1 1 B A 7 1_555 A G 29 1_555 0.039 1.621 0.170 -23.909 -2.795 -19.068 18 B_A7:G29_A B 7 ? A 29 ? 8 1 1 A G 10 1_555 A C 28 1_555 -0.278 -0.188 -0.411 -8.922 -9.681 2.379 19 A_G10:C28_A A 10 ? A 28 ? 19 1 1 A A 11 1_555 A U 27 1_555 0.049 -0.092 0.068 -8.810 3.469 4.671 20 A_A11:U27_A A 11 ? A 27 ? 20 1 1 A U 12 1_555 A A 26 1_555 0.054 -0.080 0.151 -0.933 2.107 4.424 21 A_U12:A26_A A 12 ? A 26 ? 20 1 1 A G 13 1_555 A C 25 1_555 -0.054 -0.176 -0.073 1.316 -9.950 1.917 22 A_G13:C25_A A 13 ? A 25 ? 19 1 1 A G 14 1_555 A C 24 1_555 -0.170 -0.135 0.265 -8.480 -11.192 -0.869 23 A_G14:C24_A A 14 ? A 24 ? 19 1 1 A A 15 1_555 B U 10 1_555 -1.899 3.199 -0.479 -5.817 -5.073 124.858 24 A_A15:U10_B A 15 ? B 10 ? ? ? 1 A G 19 1_555 B C 20 1_555 -0.037 -0.079 0.387 5.425 -4.402 -1.963 25 A_G19:C20_B A 19 ? B 20 ? 19 1 1 A G 20 1_555 B U 19 1_555 -1.822 -0.367 0.017 -2.414 -5.370 5.714 26 A_G20:U19_B A 20 ? B 19 ? 28 1 1 A C 21 1_555 B G 18 1_555 0.172 -0.139 0.541 -0.201 -5.022 2.208 27 A_C21:G18_B A 21 ? B 18 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 33 1_555 A G 2 1_555 B C 32 1_555 -0.123 -1.951 3.203 -2.494 4.824 27.835 -5.020 -0.286 2.832 9.909 5.122 28.350 1 AA_G1G2:C32C33_BB A 1 ? B 33 ? A 2 ? B 32 ? 1 A G 2 1_555 B C 32 1_555 A U 3 1_555 B A 31 1_555 -0.134 -1.472 3.246 1.864 10.090 32.414 -4.018 0.506 2.669 17.535 -3.239 33.958 2 AA_G2U3:A31C32_BB A 2 ? B 32 ? A 3 ? B 31 ? 1 A U 3 1_555 B A 31 1_555 A A 4 1_555 B U 30 1_555 0.409 -1.389 2.679 -2.599 21.083 30.188 -4.189 -0.894 1.406 35.490 4.375 36.770 3 AA_U3A4:U30A31_BB A 3 ? B 31 ? A 4 ? B 30 ? 1 A A 4 1_555 B U 30 1_555 A U 5 1_555 B A 29 1_555 0.160 -1.241 3.138 2.497 6.689 31.210 -3.367 0.126 2.822 12.233 -4.567 31.997 4 AA_A4U5:A29U30_BB A 4 ? B 30 ? A 5 ? B 29 ? 1 A U 5 1_555 B A 29 1_555 A A 6 1_555 B U 28 1_555 -0.015 -1.581 3.225 2.808 18.615 32.600 -4.572 0.343 2.050 30.226 -4.560 37.517 5 AA_U5A6:U28A29_BB A 5 ? B 29 ? A 6 ? B 28 ? 1 A A 6 1_555 B U 28 1_555 A G 7 1_555 B C 27 1_555 -0.490 -1.441 2.958 -0.228 9.363 29.716 -4.189 0.877 2.407 17.712 0.431 31.125 6 AA_A6G7:C27U28_BB A 6 ? B 28 ? A 7 ? B 27 ? 1 A G 7 1_555 B C 27 1_555 B G 11 1_555 B C 26 1_555 0.129 -2.249 3.545 -0.425 2.109 33.639 -4.244 -0.296 3.400 3.640 0.734 33.706 7 AB_G7G11:C26C27_BB A 7 ? B 27 ? B 11 ? B 26 ? 1 B G 11 1_555 B C 26 1_555 B A 12 1_555 B U 25 1_555 -0.539 -1.484 3.145 -0.529 4.956 36.218 -3.005 0.791 2.930 7.925 0.846 36.548 8 BB_G11A12:U25C26_BB B 11 ? B 26 ? B 12 ? B 25 ? 1 B A 12 1_555 B U 25 1_555 B G 13 1_555 B C 24 1_555 0.653 -1.845 3.003 1.171 8.713 27.404 -5.354 -1.095 2.343 17.820 -2.395 28.754 9 BB_A12G13:C24U25_BB B 12 ? B 25 ? B 13 ? B 24 ? 1 B G 13 1_555 B C 24 1_555 B G 14 1_555 B C 23 1_555 -0.140 -1.994 3.126 -2.260 7.639 36.600 -4.008 -0.048 2.674 11.990 3.547 37.428 10 BB_G13G14:C23C24_BB B 13 ? B 24 ? B 14 ? B 23 ? 1 B G 1 1_555 A C 35 1_555 B G 2 1_555 A C 34 1_555 -0.281 -2.259 2.859 -3.973 7.656 30.979 -5.177 -0.060 2.268 13.996 7.262 32.129 11 BB_G1G2:C34C35_AA B 1 ? A 35 ? B 2 ? A 34 ? 1 B G 2 1_555 A C 34 1_555 B C 3 1_555 A G 33 1_555 -0.154 -1.449 3.256 1.501 8.365 33.986 -3.597 0.470 2.822 14.040 -2.519 35.003 12 BB_G2C3:G33C34_AA B 2 ? A 34 ? B 3 ? A 33 ? 1 B C 3 1_555 A G 33 1_555 B G 4 1_555 A CBV 32 1_555 0.071 -1.829 3.200 4.267 14.742 31.715 -4.932 0.433 2.157 25.213 -7.298 35.147 13 BB_C3G4:CBV32G33_AA B 3 ? A 33 ? B 4 ? A 32 ? 1 B G 4 1_555 A CBV 32 1_555 B G 5 1_555 A C 31 1_555 1.154 -2.200 3.095 0.140 5.383 25.636 -6.137 -2.513 2.592 11.963 -0.311 26.186 14 BB_G4G5:C31CBV32_AA B 4 ? A 32 ? B 5 ? A 31 ? 1 B G 5 1_555 A C 31 1_555 B G 6 1_555 A C 30 1_555 0.387 -2.225 3.192 2.463 3.847 34.543 -4.268 -0.294 2.954 6.444 -4.126 34.835 15 BB_G5G6:C30C31_AA B 5 ? A 31 ? B 6 ? A 30 ? 1 B G 6 1_555 A C 30 1_555 B A 7 1_555 A G 29 1_555 -0.879 -2.277 3.372 8.147 2.603 36.599 -3.871 2.407 2.952 4.077 -12.760 37.552 16 BB_G6A7:G29C30_AA B 6 ? A 30 ? B 7 ? A 29 ? 1 B A 7 1_555 A G 29 1_555 A G 10 1_555 A C 28 1_555 -1.819 -3.562 3.408 21.973 0.909 48.829 -4.026 3.329 2.381 1.041 -25.156 53.274 17 BA_A7G10:C28G29_AA B 7 ? A 29 ? A 10 ? A 28 ? 1 A G 10 1_555 A C 28 1_555 A A 11 1_555 A U 27 1_555 -0.998 -1.659 2.936 -7.563 9.647 33.909 -3.872 0.685 2.543 15.909 12.473 35.995 18 AA_G10A11:U27C28_AA A 10 ? A 28 ? A 11 ? A 27 ? 1 A A 11 1_555 A U 27 1_555 A U 12 1_555 A A 26 1_555 0.088 -1.188 3.078 0.006 10.798 32.198 -3.571 -0.150 2.558 18.820 -0.010 33.915 19 AA_A11U12:A26U27_AA A 11 ? A 27 ? A 12 ? A 26 ? 1 A U 12 1_555 A A 26 1_555 A G 13 1_555 A C 25 1_555 0.444 -1.091 2.924 5.384 17.989 32.908 -3.609 -0.110 2.116 29.004 -8.680 37.760 20 AA_U12G13:C25A26_AA A 12 ? A 26 ? A 13 ? A 25 ? 1 A G 13 1_555 A C 25 1_555 A G 14 1_555 A C 24 1_555 1.024 -2.381 3.248 1.714 11.150 28.518 -6.423 -1.644 2.237 21.595 -3.319 30.625 21 AA_G13G14:C24C25_AA A 13 ? A 25 ? A 14 ? A 24 ? 1 A G 14 1_555 A C 24 1_555 A A 15 1_555 B U 10 1_555 -0.376 -2.503 6.416 11.489 0.045 -34.179 4.037 2.636 6.221 -0.073 18.897 -36.003 22 AA_G14A15:U10C24_BA A 14 ? A 24 ? A 15 ? B 10 ? 1 A G 19 1_555 B C 20 1_555 A G 20 1_555 B U 19 1_555 0.043 -2.116 2.943 -2.338 15.211 29.133 -5.687 -0.376 1.655 27.918 4.292 32.870 23 AA_G19G20:U19C20_BB A 19 ? B 20 ? A 20 ? B 19 ? 1 A G 20 1_555 B U 19 1_555 A C 21 1_555 B G 18 1_555 -0.265 -1.345 3.198 -4.379 2.393 40.429 -2.189 -0.089 3.127 3.446 6.307 40.723 24 AA_G20C21:G18U19_BB A 20 ? B 19 ? A 21 ? B 18 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Cancer Research UK' 'United Kingdom' A18604 1 'National Natural Science Foundation of China (NSFC)' China 32171191 2 # _atom_sites.entry_id 9G4P _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.008812 _atom_sites.fract_transf_matrix[1][2] 0.005088 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010176 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016867 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol BR C MG N O P # loop_ # loop_ #