HEADER HYDROLASE 17-JUL-24 9G5M TITLE N-ACYL-D-AMINO-ACID DEACYLASE (D-ACYLASE) FROM KLEBSIELLA PNEUMONIAE TITLE 2 IN AN OPEN CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMIDOHYDROLASE FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: D-AMINOACYLASE; COMPND 5 EC: 3.5.1.-,3.5.1.81; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE KP13; SOURCE 3 ORGANISM_TAXID: 1123862; SOURCE 4 GENE: DAN, B5L96_17380, B6I68_16395, BANRA_04485, BL124_00028775, SOURCE 5 DW281_07100, EAO17_17410, FXN67_23300, G4V31_23420, GJJ08_023370, SOURCE 6 GJJ13_021835, GJJ18_03715, GNF00_21165, NCTC11679_04932, SOURCE 7 NCTC13443_01470, NCTC5052_02702, NCTC9601_05682, NCTC9661_05441, SOURCE 8 QIG75_04865, SAMEA3499874_02915, SAMEA3499901_00964, SOURCE 9 SAMEA3512100_03687, SAMEA3515122_03158, SAMEA3538658_01149, SOURCE 10 SAMEA3538828_01003, SAMEA3673026_03520, SAMEA3720909_04521, SOURCE 11 SAMEA4364603_03367, SAMEA4873597_03320, SAMEA4873632_03948, SOURCE 12 VKR_04363; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_PLASMID: PET22B+ KEYWDS N-ACYL-D-AMINO-ACID DEACYLASE, D-ACYLASE, AMIDOHYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.GAVIRA,S.MARTINEZ-RODRIGUEZ REVDAT 1 18-JUN-25 9G5M 0 JRNL AUTH S.MARTINEZ-RODRIGUEZ,J.A.GAVIRA JRNL TITL REVISITING D-ACYLASES FOR D-AMINO ACID PRODUCTION. JRNL REF MICROB BIOTECHNOL V. 18 70179 2025 JRNL REFN ISSN 1751-7915 JRNL PMID 40491232 JRNL DOI 10.1111/1751-7915.70179 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.1-5286 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 34842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1729 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.3300 - 2.2700 0.00 0 154 0.2281 0.2576 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 372 THROUGH 479 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.8483 38.1881 11.5890 REMARK 3 T TENSOR REMARK 3 T11: 0.1576 T22: 0.2569 REMARK 3 T33: 0.1584 T12: -0.0065 REMARK 3 T13: -0.0063 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 1.4302 L22: 1.9865 REMARK 3 L33: 2.2426 L12: 0.3316 REMARK 3 L13: 0.0473 L23: -0.6590 REMARK 3 S TENSOR REMARK 3 S11: -0.0189 S12: 0.0546 S13: 0.0067 REMARK 3 S21: -0.0316 S22: -0.0275 S23: -0.1424 REMARK 3 S31: -0.0346 S32: 0.2054 S33: 0.0437 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1927 36.3316 27.0062 REMARK 3 T TENSOR REMARK 3 T11: 0.1840 T22: 0.2914 REMARK 3 T33: 0.1301 T12: -0.0400 REMARK 3 T13: -0.0155 T23: 0.0294 REMARK 3 L TENSOR REMARK 3 L11: 4.9200 L22: 2.4751 REMARK 3 L33: 1.1243 L12: 0.2389 REMARK 3 L13: 1.0319 L23: 1.4492 REMARK 3 S TENSOR REMARK 3 S11: 0.1820 S12: -0.2258 S13: -0.2573 REMARK 3 S21: 0.1713 S22: -0.1160 S23: -0.2587 REMARK 3 S31: 0.1784 S32: 0.0283 S33: -0.0501 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.2241 29.0565 5.8206 REMARK 3 T TENSOR REMARK 3 T11: 0.2637 T22: 0.2572 REMARK 3 T33: 0.1573 T12: 0.0019 REMARK 3 T13: -0.0094 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 2.3313 L22: 1.3437 REMARK 3 L33: 0.7326 L12: 0.1869 REMARK 3 L13: -0.3080 L23: -0.7415 REMARK 3 S TENSOR REMARK 3 S11: 0.0615 S12: 0.2763 S13: -0.1938 REMARK 3 S21: -0.2271 S22: -0.0296 S23: 0.1046 REMARK 3 S31: 0.2299 S32: 0.0004 S33: -0.0441 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.5570 46.9651 3.5028 REMARK 3 T TENSOR REMARK 3 T11: 0.2563 T22: 0.3032 REMARK 3 T33: 0.1962 T12: 0.0322 REMARK 3 T13: -0.0005 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 1.5230 L22: 0.8586 REMARK 3 L33: 0.9265 L12: 0.2991 REMARK 3 L13: -0.2943 L23: -0.0212 REMARK 3 S TENSOR REMARK 3 S11: 0.0131 S12: 0.2002 S13: 0.1166 REMARK 3 S21: -0.1106 S22: -0.0069 S23: 0.0349 REMARK 3 S31: -0.1369 S32: -0.1558 S33: -0.0106 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 371 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.0871 42.2951 -14.7307 REMARK 3 T TENSOR REMARK 3 T11: 0.2169 T22: 0.2990 REMARK 3 T33: 0.2109 T12: -0.0631 REMARK 3 T13: -0.0095 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.2995 L22: 0.1859 REMARK 3 L33: 6.4662 L12: -0.0444 REMARK 3 L13: -0.4137 L23: 1.1256 REMARK 3 S TENSOR REMARK 3 S11: -0.0131 S12: 0.0944 S13: -0.0075 REMARK 3 S21: -0.0822 S22: 0.0267 S23: -0.0141 REMARK 3 S31: 0.1159 S32: -0.1162 S33: -0.0206 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9G5M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-24. REMARK 100 THE DEPOSITION ID IS D_1292140318. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-AUG-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34890 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 125.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.21400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : 1.24600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 CACODYLATE TRIHYDRATE PH 6.5, 30% W/V POLYETHYLENE GLYCOL 8,000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.81400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.90700 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 41.90700 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 83.81400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 480 REMARK 465 HIS A 481 REMARK 465 HIS A 482 REMARK 465 HIS A 483 REMARK 465 HIS A 484 REMARK 465 HIS A 485 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 97 -3.94 74.17 REMARK 500 PHE A 156 43.97 -95.18 REMARK 500 PHE A 221 -134.62 -118.80 REMARK 500 PRO A 223 34.81 -85.31 REMARK 500 HIS A 246 59.83 24.01 REMARK 500 THR A 402 -91.14 -141.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 522 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 64 NE2 REMARK 620 2 CYS A 91 SG 115.3 REMARK 620 3 ASP A 362 OD1 88.2 155.0 REMARK 620 4 SO4 A 514 O3 98.0 100.3 66.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 523 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 91 SG REMARK 620 2 HIS A 216 ND1 124.8 REMARK 620 3 HIS A 246 NE2 111.0 95.4 REMARK 620 4 SO4 A 514 O4 116.3 94.4 112.6 REMARK 620 N 1 2 3 DBREF 9G5M A 1 479 UNP W9BIW9 W9BIW9_KLEPN 1 479 SEQADV 9G5M HIS A 480 UNP W9BIW9 EXPRESSION TAG SEQADV 9G5M HIS A 481 UNP W9BIW9 EXPRESSION TAG SEQADV 9G5M HIS A 482 UNP W9BIW9 EXPRESSION TAG SEQADV 9G5M HIS A 483 UNP W9BIW9 EXPRESSION TAG SEQADV 9G5M HIS A 484 UNP W9BIW9 EXPRESSION TAG SEQADV 9G5M HIS A 485 UNP W9BIW9 EXPRESSION TAG SEQRES 1 A 485 MET LYS VAL ASP TRP LEU PHE LYS ASN VAL THR VAL ILE SEQRES 2 A 485 ASP GLY SER GLY GLY PRO GLN TYR ARG ALA ASP VAL ALA SEQRES 3 A 485 VAL LYS GLY ASP ARG ILE MET ALA ILE ALA PRO ALA LEU SEQRES 4 A 485 ASP VAL ALA ALA GLU GLN VAL ILE ASP GLY GLN GLY ARG SEQRES 5 A 485 VAL LEU ALA PRO GLY PHE ILE ASP VAL HIS THR HIS ASP SEQRES 6 A 485 ASP ILE ASN VAL ILE ARG MET PRO GLU TYR LEU PRO LYS SEQRES 7 A 485 LEU SER GLN GLY VAL THR THR VAL ILE VAL GLY ASN CYS SEQRES 8 A 485 GLY ILE SER ALA ALA THR ALA THR MET ARG GLY GLU VAL SEQRES 9 A 485 PRO ASP PRO MET ASN LEU LEU GLY GLU GLN GLN HIS PHE SEQRES 10 A 485 ILE TYR PRO THR VAL GLU ALA TYR ALA HIS ALA VAL GLU SEQRES 11 A 485 ALA ALA ARG PRO SER LEU ASN VAL GLY THR LEU ILE GLY SEQRES 12 A 485 HIS THR ALA LEU ARG ASN ASN HIS MET ASP ASP LEU PHE SEQRES 13 A 485 ARG PRO ALA ASN GLU THR GLU ILE ALA GLY MET ARG VAL SEQRES 14 A 485 GLN LEU ARG ASP ALA LEU ARG GLN GLY ALA LEU GLY LEU SEQRES 15 A 485 SER THR GLY LEU ALA TYR ALA SER ALA PHE GLN SER THR SEQRES 16 A 485 THR GLU GLU VAL MET ALA LEU ALA GLU GLU LEU ALA ALA SEQRES 17 A 485 GLY LYS GLY VAL TYR THR THR HIS LEU ARG SER GLU PHE SEQRES 18 A 485 GLU PRO ILE LEU GLU ALA LEU ASP GLU ALA PHE ARG ILE SEQRES 19 A 485 GLY ARG HIS GLY ASN VAL PRO VAL VAL VAL SER HIS HIS SEQRES 20 A 485 LYS CYS ALA GLY ALA LYS ASN TRP GLY ARG THR LYS GLU SEQRES 21 A 485 THR LEU ALA PHE PHE ASP GLU MET ARG GLN GLN GLN ASP SEQRES 22 A 485 ILE ALA CYS ASP CYS TYR PRO TYR SER ALA SER SER SER SEQRES 23 A 485 THR LEU ASP MET LYS GLN VAL THR ASP GLU PHE ASP ILE SEQRES 24 A 485 VAL ILE THR TRP SER GLU ALA GLN PRO GLU GLN ALA GLY SEQRES 25 A 485 LYS THR LEU GLN GLN ILE ALA ASP GLU TRP GLN VAL SER SEQRES 26 A 485 LEU HIS ASP ALA ALA ALA ARG LEU MET PRO ALA GLY ALA SEQRES 27 A 485 ILE TYR HIS ASN MET ASP GLU GLN ASP VAL ARG ARG VAL SEQRES 28 A 485 MET ARG TYR PRO VAL THR MET ILE GLY SER ASP GLY LEU SEQRES 29 A 485 PRO ASN ASP PRO MET PRO HIS PRO ARG LEU TRP GLY ALA SEQRES 30 A 485 PHE PRO ARG VAL LEU GLY HIS TYR SER ARG ASP GLU GLN SEQRES 31 A 485 LEU PHE PRO LEU THR THR ALA VAL HIS LYS MET THR GLY SEQRES 32 A 485 LEU SER ALA ALA ARG PHE GLN LEU ALA ASP ARG GLY LEU SEQRES 33 A 485 VAL LYS ILE GLY TYR PHE ALA ASP LEU VAL LEU PHE ASP SEQRES 34 A 485 PRO GLN THR VAL ARG ASP VAL ALA SER PHE SER ASP PRO SEQRES 35 A 485 LYS ARG PRO ALA ASP GLY ILE GLU ALA VAL MET VAL ASN SEQRES 36 A 485 GLY VAL MET SER TYR GLY SER ASP LYS LYS ILE THR GLY SEQRES 37 A 485 ARG ALA GLY ARG PHE LEU ARG ARG ARG MET ASP HIS HIS SEQRES 38 A 485 HIS HIS HIS HIS HET SO4 A 501 5 HET SO4 A 502 5 HET PEG A 503 7 HET EDO A 504 4 HET GOL A 505 6 HET EDO A 506 4 HET PGE A 507 10 HET GOL A 508 6 HET PEG A 509 7 HET GOL A 510 6 HET PEG A 511 7 HET SO4 A 512 5 HET SO4 A 513 5 HET SO4 A 514 5 HET SO4 A 515 5 HET EDO A 516 4 HET GOL A 517 6 HET PEG A 518 17 HET EDO A 519 10 HET EDO A 520 10 HET PGE A 521 24 HET NI A 522 1 HET NI A 523 1 HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM PGE TRIETHYLENE GLYCOL HETNAM NI NICKEL (II) ION HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 6(O4 S 2-) FORMUL 4 PEG 4(C4 H10 O3) FORMUL 5 EDO 5(C2 H6 O2) FORMUL 6 GOL 4(C3 H8 O3) FORMUL 8 PGE 2(C6 H14 O4) FORMUL 23 NI 2(NI 2+) FORMUL 25 HOH *374(H2 O) HELIX 1 AA1 ILE A 67 MET A 72 1 6 HELIX 2 AA2 TYR A 75 SER A 80 1 6 HELIX 3 AA3 PRO A 107 LEU A 111 5 5 HELIX 4 AA4 GLU A 113 PHE A 117 5 5 HELIX 5 AA5 THR A 121 ARG A 133 1 13 HELIX 6 AA6 HIS A 144 MET A 152 1 9 HELIX 7 AA7 ASN A 160 GLN A 177 1 18 HELIX 8 AA8 TYR A 188 GLN A 193 1 6 HELIX 9 AA9 THR A 195 GLU A 204 1 10 HELIX 10 AB1 GLU A 205 ALA A 207 5 3 HELIX 11 AB2 PRO A 223 ASN A 239 1 17 HELIX 12 AB3 GLY A 251 GLY A 256 5 6 HELIX 13 AB4 ARG A 257 ARG A 269 1 13 HELIX 14 AB5 ASP A 289 VAL A 293 5 5 HELIX 15 AB6 GLN A 307 ALA A 311 5 5 HELIX 16 AB7 THR A 314 GLN A 323 1 10 HELIX 17 AB8 SER A 325 MET A 334 1 10 HELIX 18 AB9 ASP A 344 TYR A 354 1 11 HELIX 19 AC1 PRO A 372 GLY A 383 1 12 HELIX 20 AC2 PRO A 393 LYS A 400 1 8 HELIX 21 AC3 THR A 402 GLN A 410 1 9 SHEET 1 AA1 4 ARG A 31 ALA A 36 0 SHEET 2 AA1 4 TYR A 21 LYS A 28 -1 N ASP A 24 O ALA A 36 SHEET 3 AA1 4 VAL A 3 VAL A 12 -1 N PHE A 7 O VAL A 25 SHEET 4 AA1 4 ALA A 43 ASP A 48 1 O ILE A 47 N LYS A 8 SHEET 1 AA2 7 ARG A 31 ALA A 36 0 SHEET 2 AA2 7 TYR A 21 LYS A 28 -1 N ASP A 24 O ALA A 36 SHEET 3 AA2 7 VAL A 3 VAL A 12 -1 N PHE A 7 O VAL A 25 SHEET 4 AA2 7 VAL A 53 PRO A 56 1 O LEU A 54 N THR A 11 SHEET 5 AA2 7 LEU A 425 PHE A 428 -1 O VAL A 426 N ALA A 55 SHEET 6 AA2 7 ILE A 449 VAL A 454 -1 O ALA A 451 N LEU A 427 SHEET 7 AA2 7 VAL A 457 GLY A 461 -1 O SER A 459 N VAL A 452 SHEET 1 AA3 3 PHE A 58 ASP A 60 0 SHEET 2 AA3 3 VAL A 83 VAL A 88 1 O THR A 85 N ASP A 60 SHEET 3 AA3 3 ASN A 137 THR A 140 1 O ASN A 137 N THR A 84 SHEET 1 AA4 6 ILE A 142 GLY A 143 0 SHEET 2 AA4 6 GLY A 181 GLY A 185 1 O GLY A 181 N ILE A 142 SHEET 3 AA4 6 VAL A 212 HIS A 216 1 O HIS A 216 N THR A 184 SHEET 4 AA4 6 VAL A 242 VAL A 244 1 O VAL A 243 N TYR A 213 SHEET 5 AA4 6 ILE A 274 CYS A 278 1 O ALA A 275 N VAL A 242 SHEET 6 AA4 6 THR A 357 ILE A 359 1 O MET A 358 N CYS A 276 SHEET 1 AA5 3 SER A 284 THR A 287 0 SHEET 2 AA5 3 ALA A 336 TYR A 340 -1 O ALA A 338 N SER A 286 SHEET 3 AA5 3 ILE A 299 SER A 304 -1 N VAL A 300 O ILE A 339 LINK NE2 HIS A 64 NI NI A 522 1555 1555 2.01 LINK SG CYS A 91 NI NI A 522 1555 1555 2.46 LINK SG CYS A 91 NI NI A 523 1555 1555 2.32 LINK ND1 HIS A 216 NI NI A 523 1555 1555 2.14 LINK NE2 HIS A 246 NI NI A 523 1555 1555 2.17 LINK OD1 ASP A 362 NI NI A 522 1555 1555 2.67 LINK O3 SO4 A 514 NI NI A 522 1555 1555 2.22 LINK O4 SO4 A 514 NI NI A 523 1555 1555 2.07 CISPEP 1 ASP A 106 PRO A 107 0 -1.43 CISPEP 2 ASP A 106 PRO A 107 0 -0.92 CISPEP 3 MET A 334 PRO A 335 0 -5.11 CRYST1 100.774 100.774 125.721 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009923 0.005729 0.000000 0.00000 SCALE2 0.000000 0.011458 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007954 0.00000 CONECT 488 4027 CONECT 705 4027 4028 CONECT 1706 4028 CONECT 1960 4028 CONECT 2925 4027 CONECT 3869 3870 3871 3872 3873 CONECT 3870 3869 CONECT 3871 3869 CONECT 3872 3869 CONECT 3873 3869 CONECT 3874 3875 3876 3877 3878 CONECT 3875 3874 CONECT 3876 3874 CONECT 3877 3874 CONECT 3878 3874 CONECT 3879 3880 3881 CONECT 3880 3879 CONECT 3881 3879 3882 CONECT 3882 3881 3883 CONECT 3883 3882 3884 CONECT 3884 3883 3885 CONECT 3885 3884 CONECT 3886 3887 3888 CONECT 3887 3886 CONECT 3888 3886 3889 CONECT 3889 3888 CONECT 3890 3891 3892 CONECT 3891 3890 CONECT 3892 3890 3893 3894 CONECT 3893 3892 CONECT 3894 3892 3895 CONECT 3895 3894 CONECT 3896 3897 3898 CONECT 3897 3896 CONECT 3898 3896 3899 CONECT 3899 3898 CONECT 3900 3901 3902 CONECT 3901 3900 CONECT 3902 3900 3903 CONECT 3903 3902 3904 CONECT 3904 3903 3905 CONECT 3905 3904 3909 CONECT 3906 3907 CONECT 3907 3906 3908 CONECT 3908 3907 3909 CONECT 3909 3905 3908 CONECT 3910 3911 3912 CONECT 3911 3910 CONECT 3912 3910 3913 3914 CONECT 3913 3912 CONECT 3914 3912 3915 CONECT 3915 3914 CONECT 3916 3917 3918 CONECT 3917 3916 CONECT 3918 3916 3919 CONECT 3919 3918 3920 CONECT 3920 3919 3921 CONECT 3921 3920 3922 CONECT 3922 3921 CONECT 3923 3924 3925 CONECT 3924 3923 CONECT 3925 3923 3926 3927 CONECT 3926 3925 CONECT 3927 3925 3928 CONECT 3928 3927 CONECT 3929 3930 3931 CONECT 3930 3929 CONECT 3931 3929 3932 CONECT 3932 3931 3933 CONECT 3933 3932 3934 CONECT 3934 3933 3935 CONECT 3935 3934 CONECT 3936 3937 3938 3939 3940 CONECT 3937 3936 CONECT 3938 3936 CONECT 3939 3936 CONECT 3940 3936 CONECT 3941 3942 3943 3944 3945 CONECT 3942 3941 CONECT 3943 3941 CONECT 3944 3941 CONECT 3945 3941 CONECT 3946 3947 3948 3949 3950 CONECT 3947 3946 CONECT 3948 3946 CONECT 3949 3946 4027 CONECT 3950 3946 4028 CONECT 3951 3952 3953 3954 3955 CONECT 3952 3951 CONECT 3953 3951 CONECT 3954 3951 CONECT 3955 3951 CONECT 3956 3957 3958 CONECT 3957 3956 CONECT 3958 3956 3959 CONECT 3959 3958 CONECT 3960 3961 3962 CONECT 3961 3960 CONECT 3962 3960 3963 3964 CONECT 3963 3962 CONECT 3964 3962 3965 CONECT 3965 3964 CONECT 3966 3967 3968 3973 3974 CONECT 3967 3966 3975 CONECT 3968 3966 3969 3976 3977 CONECT 3969 3968 3970 CONECT 3970 3969 3971 3978 3979 CONECT 3971 3970 3972 3980 3981 CONECT 3972 3971 3982 CONECT 3973 3966 CONECT 3974 3966 CONECT 3975 3967 CONECT 3976 3968 CONECT 3977 3968 CONECT 3978 3970 CONECT 3979 3970 CONECT 3980 3971 CONECT 3981 3971 CONECT 3982 3972 CONECT 3983 3984 3985 3987 3988 CONECT 3984 3983 3989 CONECT 3985 3983 3986 3990 3991 CONECT 3986 3985 3992 CONECT 3987 3983 CONECT 3988 3983 CONECT 3989 3984 CONECT 3990 3985 CONECT 3991 3985 CONECT 3992 3986 CONECT 3993 3994 3995 3997 3998 CONECT 3994 3993 3999 CONECT 3995 3993 3996 4000 4001 CONECT 3996 3995 4002 CONECT 3997 3993 CONECT 3998 3993 CONECT 3999 3994 CONECT 4000 3995 CONECT 4001 3995 CONECT 4002 3996 CONECT 4003 4004 4005 4013 4014 CONECT 4004 4003 4015 CONECT 4005 4003 4006 4016 4017 CONECT 4006 4005 4007 CONECT 4007 4006 4008 4018 4019 CONECT 4008 4007 4012 4020 4021 CONECT 4009 4010 4022 CONECT 4010 4009 4011 4023 4024 CONECT 4011 4010 4012 4025 4026 CONECT 4012 4008 4011 CONECT 4013 4003 CONECT 4014 4003 CONECT 4015 4004 CONECT 4016 4005 CONECT 4017 4005 CONECT 4018 4007 CONECT 4019 4007 CONECT 4020 4008 CONECT 4021 4008 CONECT 4022 4009 CONECT 4023 4010 CONECT 4024 4010 CONECT 4025 4011 CONECT 4026 4011 CONECT 4027 488 705 2925 3949 CONECT 4028 705 1706 1960 3950 MASTER 334 0 23 21 23 0 0 6 4197 1 165 38 END