HEADER TOXIN 17-JUL-24 9G5Z TITLE NANOBODY-MEDIATED ACTIVATION AND INHIBITION OF STAPHYLOCOCCUS AUREUS TITLE 2 MAZF COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDORIBONUCLEASE MAZF; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SAMAZF,TOXIN MAZF,MRNA INTERFERASE MAZF; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NANOBODY 11; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: MAZF, SA1873; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 9 ORGANISM_TAXID: 9844; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TOXIN-ANTITOXIN SYSTEM, RIBONUCLEASE, NANOBODY, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR M.PROLIC-KALINSEK,S.HAESAERTS,R.LORIS REVDAT 1 24-JUL-24 9G5Z 0 JRNL AUTH M.PROLIC-KALINSEK,V.ZORZINI,S.HAESAERTS,P.DE BRUYN,R.LORIS JRNL TITL STAPHYLOCOCCUS AUREUS MAZF IN COMPLEX WITH NANOBODY 11 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.351 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 8382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.011 REMARK 3 FREE R VALUE TEST SET COUNT : 420 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5746 - 4.9442 1.00 2763 146 0.2446 0.2798 REMARK 3 2 4.9442 - 3.9251 1.00 2659 140 0.2259 0.2565 REMARK 3 3 3.9251 - 3.4291 0.96 2540 134 0.2784 0.3522 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.542 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.242 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 107.1 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 109.1 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3503 REMARK 3 ANGLE : 0.830 4775 REMARK 3 CHIRALITY : 0.053 546 REMARK 3 PLANARITY : 0.004 612 REMARK 3 DIHEDRAL : 11.913 2064 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 21.1835 3.1200 0.9908 REMARK 3 T TENSOR REMARK 3 T11: 0.5592 T22: 0.6976 REMARK 3 T33: 0.6084 T12: 0.0058 REMARK 3 T13: 0.0463 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 7.4895 L22: 8.2236 REMARK 3 L33: 6.9718 L12: 0.8727 REMARK 3 L13: 0.0128 L23: 1.5552 REMARK 3 S TENSOR REMARK 3 S11: 0.0997 S12: -0.0191 S13: 0.0711 REMARK 3 S21: 0.6756 S22: -0.0932 S23: 0.0286 REMARK 3 S31: 0.3776 S32: -0.1854 S33: -0.0778 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 32.9599 18.4968 -5.2382 REMARK 3 T TENSOR REMARK 3 T11: 0.8427 T22: 0.9119 REMARK 3 T33: 0.7508 T12: -0.0949 REMARK 3 T13: -0.0084 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 4.3709 L22: 6.5466 REMARK 3 L33: 7.7335 L12: 0.9008 REMARK 3 L13: -0.1715 L23: -0.0833 REMARK 3 S TENSOR REMARK 3 S11: 0.4066 S12: 0.4982 S13: 0.3519 REMARK 3 S21: 0.3941 S22: -0.0207 S23: -0.3840 REMARK 3 S31: -0.7870 S32: 0.3344 S33: -0.4553 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 31.0715 -10.2040 28.1827 REMARK 3 T TENSOR REMARK 3 T11: 0.9844 T22: 0.7035 REMARK 3 T33: 0.6221 T12: -0.0488 REMARK 3 T13: 0.0015 T23: -0.0620 REMARK 3 L TENSOR REMARK 3 L11: 4.4521 L22: 7.3934 REMARK 3 L33: 7.1355 L12: -1.5159 REMARK 3 L13: -2.7670 L23: -1.9736 REMARK 3 S TENSOR REMARK 3 S11: 0.1801 S12: -0.2468 S13: -0.3982 REMARK 3 S21: 0.2687 S22: -0.2348 S23: -0.0716 REMARK 3 S31: 0.3216 S32: 0.5341 S33: -0.0133 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 52.0280 11.1368 -28.7101 REMARK 3 T TENSOR REMARK 3 T11: 0.9409 T22: 1.4082 REMARK 3 T33: 0.9778 T12: -0.3451 REMARK 3 T13: -0.0174 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 8.0315 L22: 2.1564 REMARK 3 L33: 6.8935 L12: -0.4409 REMARK 3 L13: -4.7777 L23: -1.8172 REMARK 3 S TENSOR REMARK 3 S11: 0.0213 S12: 0.2676 S13: -0.1453 REMARK 3 S21: -0.0814 S22: 0.0024 S23: 0.3579 REMARK 3 S31: 0.0535 S32: -0.0188 S33: -0.0790 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'C' AND (RESID 5 THROUGH 12 OR REMARK 3 (RESID 13 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 14 OR REMARK 3 (RESID 15 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 16 REMARK 3 THROUGH 44 OR RESID 46 THROUGH 77 OR REMARK 3 (RESID 78 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 79 REMARK 3 THROUGH 106 OR (RESID 107 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 108 THROUGH 110 OR (RESID 111 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 112 THROUGH 118)) REMARK 3 SELECTION : (CHAIN 'D' AND (RESID 5 THROUGH 20 OR REMARK 3 (RESID 21 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 22 REMARK 3 THROUGH 44 OR RESID 46 THROUGH 118)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND ((RESID 0 AND (NAME CA OR REMARK 3 NAME C OR NAME O )) OR RESID 1 THROUGH 23 REMARK 3 OR (RESID 24 THROUGH 25 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME CD )) OR RESID 26 THROUGH REMARK 3 49 OR (RESID 50 THROUGH 54 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 55 THROUGH 59 OR (RESID 60 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG )) OR RESID 61 OR REMARK 3 (RESID 62 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG )) OR REMARK 3 RESID 63 THROUGH 64 OR (RESID 65 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG )) OR RESID 66 THROUGH REMARK 3 67 OR (RESID 68 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR (RESID REMARK 3 69 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB OR NAME CG )) OR RESID REMARK 3 70 THROUGH 99 OR (RESID 100 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 OR NAME CG OR NAME CD OR NAME CE )) OR REMARK 3 RESID 101 THROUGH 103 OR RESID 105 REMARK 3 THROUGH 113)) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 0 THROUGH 66 OR REMARK 3 (RESID 67 THROUGH 68 AND (NAME N OR NAME REMARK 3 CA OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 69 OR (RESID 70 AND (NAME N OR NAME REMARK 3 CA OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 71 THROUGH 87 OR (RESID 88 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 89 OR (RESID 90 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG )) OR RESID 91 THROUGH REMARK 3 103 OR RESID 105 THROUGH 113)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9G5Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-24. REMARK 100 THE DEPOSITION ID IS D_1292140359. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8391 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.429 REMARK 200 RESOLUTION RANGE LOW (A) : 45.575 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.64 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01 M COBALT(II) CHLORIDE REMARK 280 HEXAHYDRATE, 0.1 M MES MONOHYDRATE PH 6.5, 1.8 M AMMONIUM REMARK 280 SULFATE, 20% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.71667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.43333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 67.43333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.71667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 SER A -2 REMARK 465 GLN A -1 REMARK 465 VAL A 115 REMARK 465 ALA A 116 REMARK 465 HIS A 117 REMARK 465 GLN A 118 REMARK 465 LYS A 119 REMARK 465 ASN A 120 REMARK 465 MET B -12 REMARK 465 GLY B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 SER B -2 REMARK 465 GLN B -1 REMARK 465 ALA B 114 REMARK 465 VAL B 115 REMARK 465 ALA B 116 REMARK 465 HIS B 117 REMARK 465 GLN B 118 REMARK 465 LYS B 119 REMARK 465 ASN B 120 REMARK 465 ALA C 2 REMARK 465 GLN C 3 REMARK 465 VAL C 4 REMARK 465 HIS C 122 REMARK 465 HIS C 123 REMARK 465 HIS C 124 REMARK 465 HIS C 125 REMARK 465 ALA D 2 REMARK 465 GLN D 3 REMARK 465 VAL D 4 REMARK 465 SER D 119 REMARK 465 HIS D 120 REMARK 465 HIS D 121 REMARK 465 HIS D 122 REMARK 465 HIS D 123 REMARK 465 HIS D 124 REMARK 465 HIS D 125 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 49 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 LYS A 90 CD CE NZ REMARK 470 ASP B 0 N CB CG OD1 OD2 REMARK 470 ARG B 24 NE CZ NH1 NH2 REMARK 470 ARG B 49 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 50 CG1 CG2 CD1 REMARK 470 ASN B 51 CG OD1 ND2 REMARK 470 LYS B 52 CG CD CE NZ REMARK 470 LYS B 54 CG CD CE NZ REMARK 470 GLU B 60 CD OE1 OE2 REMARK 470 GLU B 62 CD OE1 OE2 REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 LYS B 64 CG CD CE NZ REMARK 470 LYS B 65 CD CE NZ REMARK 470 LEU B 68 CG CD1 CD2 REMARK 470 ASP B 69 OD1 OD2 REMARK 470 LYS B 70 CE NZ REMARK 470 LYS B 85 CG CD CE NZ REMARK 470 LYS B 100 NZ REMARK 470 GLN C 7 CG CD OE1 NE2 REMARK 470 GLN C 15 CD OE1 NE2 REMARK 470 ARG C 21 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 45 CD CE NZ REMARK 470 LYS C 67 CD CE NZ REMARK 470 LYS C 78 CD CE NZ REMARK 470 LYS C 89 CD CE NZ REMARK 470 GLU C 91 CG CD OE1 OE2 REMARK 470 ASP C 107 OD1 OD2 REMARK 470 GLN C 111 CD OE1 NE2 REMARK 470 SER C 119 OG REMARK 470 GLN D 7 CG CD OE1 NE2 REMARK 470 LEU D 13 CG CD1 CD2 REMARK 470 GLN D 15 CG CD OE1 NE2 REMARK 470 LYS D 45 CE NZ REMARK 470 LYS D 67 CD CE NZ REMARK 470 LYS D 78 CG CD CE NZ REMARK 470 LYS D 89 CD CE NZ REMARK 470 GLU D 91 CG CD OE1 OE2 REMARK 470 ASP D 107 CG OD1 OD2 REMARK 470 GLN D 111 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 88 -115.78 -85.52 REMARK 500 THR A 92 -168.14 -169.64 REMARK 500 LYS B 54 56.83 -92.24 REMARK 500 LYS B 88 -114.30 -96.10 REMARK 500 SER C 32 17.05 -68.67 REMARK 500 ALA C 94 170.88 178.72 REMARK 500 VAL C 103 -48.43 75.45 REMARK 500 ASP C 104 -38.58 -153.16 REMARK 500 ASP C 107 -70.18 -124.10 REMARK 500 HIS C 120 134.80 70.10 REMARK 500 ALA D 94 171.19 178.40 REMARK 500 VAL D 103 -47.11 73.05 REMARK 500 ASP D 104 -39.12 -152.48 REMARK 500 ASP D 107 -71.84 -125.10 REMARK 500 REMARK 500 REMARK: NULL DBREF 9G5Z A 2 120 UNP Q7A4G9 MAZF_STAAN 2 120 DBREF 9G5Z B 2 120 UNP Q7A4G9 MAZF_STAAN 2 120 DBREF 9G5Z C 2 125 PDB 9G5Z 9G5Z 2 125 DBREF 9G5Z D 2 125 PDB 9G5Z 9G5Z 2 125 SEQADV 9G5Z MET A -12 UNP Q7A4G9 INITIATING METHIONINE SEQADV 9G5Z GLY A -11 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z SER A -10 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z SER A -9 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS A -8 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS A -7 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS A -6 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS A -5 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS A -4 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS A -3 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z SER A -2 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z GLN A -1 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z ASP A 0 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z PRO A 1 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z MET B -12 UNP Q7A4G9 INITIATING METHIONINE SEQADV 9G5Z GLY B -11 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z SER B -10 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z SER B -9 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS B -8 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS B -7 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS B -6 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS B -5 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS B -4 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z HIS B -3 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z SER B -2 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z GLN B -1 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z ASP B 0 UNP Q7A4G9 EXPRESSION TAG SEQADV 9G5Z PRO B 1 UNP Q7A4G9 EXPRESSION TAG SEQRES 1 A 133 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 133 PRO ILE ARG ARG GLY ASP VAL TYR LEU ALA ASP LEU SER SEQRES 3 A 133 PRO VAL GLN GLY SER GLU GLN GLY GLY VAL ARG PRO VAL SEQRES 4 A 133 VAL ILE ILE GLN ASN ASP THR GLY ASN LYS TYR SER PRO SEQRES 5 A 133 THR VAL ILE VAL ALA ALA ILE THR GLY ARG ILE ASN LYS SEQRES 6 A 133 ALA LYS ILE PRO THR HIS VAL GLU ILE GLU LYS LYS LYS SEQRES 7 A 133 TYR LYS LEU ASP LYS ASP SER VAL ILE LEU LEU GLU GLN SEQRES 8 A 133 ILE ARG THR LEU ASP LYS LYS ARG LEU LYS GLU LYS LEU SEQRES 9 A 133 THR TYR LEU SER ASP ASP LYS MET LYS GLU VAL ASP ASN SEQRES 10 A 133 ALA LEU MET ILE SER LEU GLY LEU ASN ALA VAL ALA HIS SEQRES 11 A 133 GLN LYS ASN SEQRES 1 B 133 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 B 133 PRO ILE ARG ARG GLY ASP VAL TYR LEU ALA ASP LEU SER SEQRES 3 B 133 PRO VAL GLN GLY SER GLU GLN GLY GLY VAL ARG PRO VAL SEQRES 4 B 133 VAL ILE ILE GLN ASN ASP THR GLY ASN LYS TYR SER PRO SEQRES 5 B 133 THR VAL ILE VAL ALA ALA ILE THR GLY ARG ILE ASN LYS SEQRES 6 B 133 ALA LYS ILE PRO THR HIS VAL GLU ILE GLU LYS LYS LYS SEQRES 7 B 133 TYR LYS LEU ASP LYS ASP SER VAL ILE LEU LEU GLU GLN SEQRES 8 B 133 ILE ARG THR LEU ASP LYS LYS ARG LEU LYS GLU LYS LEU SEQRES 9 B 133 THR TYR LEU SER ASP ASP LYS MET LYS GLU VAL ASP ASN SEQRES 10 B 133 ALA LEU MET ILE SER LEU GLY LEU ASN ALA VAL ALA HIS SEQRES 11 B 133 GLN LYS ASN SEQRES 1 C 124 ALA GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL SEQRES 2 C 124 GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 C 124 GLY PHE THR PHE SER SER TYR ASP MET SER TRP VAL ARG SEQRES 4 C 124 GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL SER ALA ILE SEQRES 5 C 124 ASN ARG GLY GLY GLY SER THR TYR TYR ALA ASP SER VAL SEQRES 6 C 124 LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SEQRES 7 C 124 THR VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP SEQRES 8 C 124 THR ALA VAL TYR TYR CYS ALA THR TRP TRP VAL ASP SER SEQRES 9 C 124 TYR ASP TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 10 C 124 SER HIS HIS HIS HIS HIS HIS SEQRES 1 D 124 ALA GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL SEQRES 2 D 124 GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 D 124 GLY PHE THR PHE SER SER TYR ASP MET SER TRP VAL ARG SEQRES 4 D 124 GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL SER ALA ILE SEQRES 5 D 124 ASN ARG GLY GLY GLY SER THR TYR TYR ALA ASP SER VAL SEQRES 6 D 124 LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SEQRES 7 D 124 THR VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP SEQRES 8 D 124 THR ALA VAL TYR TYR CYS ALA THR TRP TRP VAL ASP SER SEQRES 9 D 124 TYR ASP TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 10 D 124 SER HIS HIS HIS HIS HIS HIS HET GOL A 201 6 HET CL A 202 1 HET GOL B 201 6 HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 2(C3 H8 O3) FORMUL 6 CL CL 1- FORMUL 8 HOH *12(H2 O) HELIX 1 AA1 ASN A 31 SER A 38 1 8 HELIX 2 AA2 GLU A 62 LYS A 67 1 6 HELIX 3 AA3 SER A 95 LEU A 110 1 16 HELIX 4 AA4 ASN B 31 SER B 38 1 8 HELIX 5 AA5 SER B 95 LEU B 110 1 16 HELIX 6 AA6 THR C 30 TYR C 34 5 5 HELIX 7 AA7 LYS C 89 THR C 93 5 5 HELIX 8 AA8 THR D 30 TYR D 34 5 5 HELIX 9 AA9 LYS D 89 THR D 93 5 5 SHEET 1 AA1 6 HIS A 58 ILE A 61 0 SHEET 2 AA1 6 SER A 72 ASP A 83 -1 O ILE A 74 N VAL A 59 SHEET 3 AA1 6 THR A 40 THR A 47 -1 N ALA A 45 O LEU A 75 SHEET 4 AA1 6 VAL A 23 ILE A 28 -1 N VAL A 27 O ALA A 44 SHEET 5 AA1 6 ASP A 6 ASP A 11 -1 N ASP A 6 O ILE A 28 SHEET 6 AA1 6 LEU A 87 TYR A 93 -1 O GLU A 89 N LEU A 9 SHEET 1 AA2 6 HIS B 58 ILE B 61 0 SHEET 2 AA2 6 SER B 72 ASP B 83 -1 O ILE B 74 N VAL B 59 SHEET 3 AA2 6 THR B 40 THR B 47 -1 N VAL B 41 O LEU B 82 SHEET 4 AA2 6 VAL B 23 ILE B 28 -1 N VAL B 27 O ALA B 44 SHEET 5 AA2 6 ASP B 6 ASP B 11 -1 N TYR B 8 O VAL B 26 SHEET 6 AA2 6 LEU B 87 TYR B 93 -1 O LYS B 88 N LEU B 9 SHEET 1 AA3 4 LEU C 6 SER C 9 0 SHEET 2 AA3 4 LEU C 20 ALA C 26 -1 O ALA C 25 N GLN C 7 SHEET 3 AA3 4 THR C 80 MET C 85 -1 O MET C 85 N LEU C 20 SHEET 4 AA3 4 PHE C 70 ASP C 75 -1 N THR C 71 O GLN C 84 SHEET 1 AA4 6 GLY C 12 VAL C 14 0 SHEET 2 AA4 6 THR C 113 VAL C 117 1 O THR C 116 N VAL C 14 SHEET 3 AA4 6 ALA C 94 TRP C 102 -1 N TYR C 96 O THR C 113 SHEET 4 AA4 6 ASP C 35 GLN C 41 -1 N VAL C 39 O TYR C 97 SHEET 5 AA4 6 LEU C 47 ILE C 53 -1 O GLU C 48 N ARG C 40 SHEET 6 AA4 6 THR C 60 TYR C 62 -1 O TYR C 61 N ALA C 52 SHEET 1 AA5 4 GLY C 12 VAL C 14 0 SHEET 2 AA5 4 THR C 113 VAL C 117 1 O THR C 116 N VAL C 14 SHEET 3 AA5 4 ALA C 94 TRP C 102 -1 N TYR C 96 O THR C 113 SHEET 4 AA5 4 SER C 105 TRP C 109 -1 O SER C 105 N TRP C 102 SHEET 1 AA6 4 LEU D 6 SER D 9 0 SHEET 2 AA6 4 LEU D 20 ALA D 26 -1 O ALA D 25 N GLN D 7 SHEET 3 AA6 4 THR D 80 MET D 85 -1 O MET D 85 N LEU D 20 SHEET 4 AA6 4 PHE D 70 ASP D 75 -1 N THR D 71 O GLN D 84 SHEET 1 AA7 6 GLY D 12 VAL D 14 0 SHEET 2 AA7 6 THR D 113 VAL D 117 1 O THR D 116 N VAL D 14 SHEET 3 AA7 6 ALA D 94 TRP D 102 -1 N TYR D 96 O THR D 113 SHEET 4 AA7 6 ASP D 35 GLN D 41 -1 N VAL D 39 O TYR D 97 SHEET 5 AA7 6 LEU D 47 ILE D 53 -1 O GLU D 48 N ARG D 40 SHEET 6 AA7 6 THR D 60 TYR D 62 -1 O TYR D 61 N ALA D 52 SHEET 1 AA8 4 GLY D 12 VAL D 14 0 SHEET 2 AA8 4 THR D 113 VAL D 117 1 O THR D 116 N VAL D 14 SHEET 3 AA8 4 ALA D 94 TRP D 102 -1 N TYR D 96 O THR D 113 SHEET 4 AA8 4 SER D 105 TRP D 109 -1 O SER D 105 N TRP D 102 SSBOND 1 CYS C 24 CYS C 98 1555 1555 2.04 SSBOND 2 CYS D 24 CYS D 98 1555 1555 2.03 CISPEP 1 SER A 13 PRO A 14 0 -4.52 CISPEP 2 SER B 13 PRO B 14 0 -8.42 CRYST1 102.100 102.100 101.150 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009794 0.005655 0.000000 0.00000 SCALE2 0.000000 0.011310 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009886 0.00000