data_9G7C # _entry.id 9G7C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9G7C pdb_00009g7c 10.2210/pdb9g7c/pdb WWPDB D_1292140451 ? ? EMDB EMD-51119 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-10-30 2 'Structure model' 1 1 2024-11-06 3 'Structure model' 1 2 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' em_admin 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 3 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_last' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_em_admin.last_update' 5 3 'Structure model' '_citation.journal_volume' 6 3 'Structure model' '_citation.title' 7 3 'Structure model' '_citation_author.name' 8 3 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9G7C _pdbx_database_status.recvd_initial_deposition_date 2024-07-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of raiA ncRNA from Clostridium reveals a new RNA 3D fold' _pdbx_database_related.db_id EMD-51119 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email janusz@iimcb.gov.pl _pdbx_contact_author.name_first Janusz _pdbx_contact_author.name_last Bujnicki _pdbx_contact_author.name_mi M. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-6633-165X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Badepally, N.G.' 1 0000-0003-4364-8811 'Moura, T.R.' 2 0000-0001-5492-8419 'Purta, E.' 3 0000-0003-0960-548X 'Baulin, E.' 4 0000-0003-4694-9783 'Bujnicki, J.M.' 5 0000-0002-6633-165X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Mol.Biol. _citation.journal_id_ASTM JMOBAK _citation.journal_id_CSD 0070 _citation.journal_id_ISSN 1089-8638 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 436 _citation.language ? _citation.page_first 168833 _citation.page_last 168833 _citation.title 'Cryo-EM Structure of raiA ncRNA From Clostridium Reveals a New RNA 3D Fold.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.jmb.2024.168833 _citation.pdbx_database_id_PubMed 39454748 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Badepally, N.G.' 1 ? primary 'de Moura, T.R.' 2 ? primary 'Purta, E.' 3 ? primary 'Baulin, E.F.' 4 ? primary 'Bujnicki, J.M.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'raiA (224-MER)' _entity.formula_weight 72829.305 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGGAGUCGGGUCUGUGGUUGAAAGUCGAUGCCAGUCGCAGGCGAAACGAUCCACAUAAGCGGGGCAAAGUUCCCGUGAGC AUGGUGCGGCUUAGAUGUAAGUCCUGUCGUGCGGCAUUCCGAAUCGAAUGCGGUGCGAGAGUGGCAGUAGUGGGCGGCGU AAAGCUCAGUAGCGAACCCACCGACAGGCGAGUGUGGGGGCAAAAACCAGGUCAGCCGACUCCA ; _entity_poly.pdbx_seq_one_letter_code_can ;GGGAGUCGGGUCUGUGGUUGAAAGUCGAUGCCAGUCGCAGGCGAAACGAUCCACAUAAGCGGGGCAAAGUUCCCGUGAGC AUGGUGCGGCUUAGAUGUAAGUCCUGUCGUGCGGCAUUCCGAAUCGAAUGCGGUGCGAGAGUGGCAGUAGUGGGCGGCGU AAAGCUCAGUAGCGAACCCACCGACAGGCGAGUGUGGGGGCAAAAACCAGGUCAGCCGACUCCA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 A n 1 5 G n 1 6 U n 1 7 C n 1 8 G n 1 9 G n 1 10 G n 1 11 U n 1 12 C n 1 13 U n 1 14 G n 1 15 U n 1 16 G n 1 17 G n 1 18 U n 1 19 U n 1 20 G n 1 21 A n 1 22 A n 1 23 A n 1 24 G n 1 25 U n 1 26 C n 1 27 G n 1 28 A n 1 29 U n 1 30 G n 1 31 C n 1 32 C n 1 33 A n 1 34 G n 1 35 U n 1 36 C n 1 37 G n 1 38 C n 1 39 A n 1 40 G n 1 41 G n 1 42 C n 1 43 G n 1 44 A n 1 45 A n 1 46 A n 1 47 C n 1 48 G n 1 49 A n 1 50 U n 1 51 C n 1 52 C n 1 53 A n 1 54 C n 1 55 A n 1 56 U n 1 57 A n 1 58 A n 1 59 G n 1 60 C n 1 61 G n 1 62 G n 1 63 G n 1 64 G n 1 65 C n 1 66 A n 1 67 A n 1 68 A n 1 69 G n 1 70 U n 1 71 U n 1 72 C n 1 73 C n 1 74 C n 1 75 G n 1 76 U n 1 77 G n 1 78 A n 1 79 G n 1 80 C n 1 81 A n 1 82 U n 1 83 G n 1 84 G n 1 85 U n 1 86 G n 1 87 C n 1 88 G n 1 89 G n 1 90 C n 1 91 U n 1 92 U n 1 93 A n 1 94 G n 1 95 A n 1 96 U n 1 97 G n 1 98 U n 1 99 A n 1 100 A n 1 101 G n 1 102 U n 1 103 C n 1 104 C n 1 105 U n 1 106 G n 1 107 U n 1 108 C n 1 109 G n 1 110 U n 1 111 G n 1 112 C n 1 113 G n 1 114 G n 1 115 C n 1 116 A n 1 117 U n 1 118 U n 1 119 C n 1 120 C n 1 121 G n 1 122 A n 1 123 A n 1 124 U n 1 125 C n 1 126 G n 1 127 A n 1 128 A n 1 129 U n 1 130 G n 1 131 C n 1 132 G n 1 133 G n 1 134 U n 1 135 G n 1 136 C n 1 137 G n 1 138 A n 1 139 G n 1 140 A n 1 141 G n 1 142 U n 1 143 G n 1 144 G n 1 145 C n 1 146 A n 1 147 G n 1 148 U n 1 149 A n 1 150 G n 1 151 U n 1 152 G n 1 153 G n 1 154 G n 1 155 C n 1 156 G n 1 157 G n 1 158 C n 1 159 G n 1 160 U n 1 161 A n 1 162 A n 1 163 A n 1 164 G n 1 165 C n 1 166 U n 1 167 C n 1 168 A n 1 169 G n 1 170 U n 1 171 A n 1 172 G n 1 173 C n 1 174 G n 1 175 A n 1 176 A n 1 177 C n 1 178 C n 1 179 C n 1 180 A n 1 181 C n 1 182 C n 1 183 G n 1 184 A n 1 185 C n 1 186 A n 1 187 G n 1 188 G n 1 189 C n 1 190 G n 1 191 A n 1 192 G n 1 193 U n 1 194 G n 1 195 U n 1 196 G n 1 197 G n 1 198 G n 1 199 G n 1 200 G n 1 201 C n 1 202 A n 1 203 A n 1 204 A n 1 205 A n 1 206 A n 1 207 C n 1 208 C n 1 209 A n 1 210 G n 1 211 G n 1 212 U n 1 213 C n 1 214 A n 1 215 G n 1 216 C n 1 217 C n 1 218 G n 1 219 A n 1 220 C n 1 221 U n 1 222 C n 1 223 C n 1 224 A n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 224 _pdbx_entity_src_syn.organism_scientific 'Clostridium sp. CAG:138' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1262775 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 G 3 3 3 G G A . n A 1 4 A 4 4 4 A A A . n A 1 5 G 5 5 5 G G A . n A 1 6 U 6 6 6 U U A . n A 1 7 C 7 7 7 C C A . n A 1 8 G 8 8 8 G G A . n A 1 9 G 9 9 9 G G A . n A 1 10 G 10 10 10 G G A . n A 1 11 U 11 11 11 U U A . n A 1 12 C 12 12 12 C C A . n A 1 13 U 13 13 13 U U A . n A 1 14 G 14 14 14 G G A . n A 1 15 U 15 15 15 U U A . n A 1 16 G 16 16 16 G G A . n A 1 17 G 17 17 17 G G A . n A 1 18 U 18 18 18 U U A . n A 1 19 U 19 19 19 U U A . n A 1 20 G 20 20 20 G G A . n A 1 21 A 21 21 21 A A A . n A 1 22 A 22 22 22 A A A . n A 1 23 A 23 23 23 A A A . n A 1 24 G 24 24 24 G G A . n A 1 25 U 25 25 25 U U A . n A 1 26 C 26 26 26 C C A . n A 1 27 G 27 27 27 G G A . n A 1 28 A 28 28 28 A A A . n A 1 29 U 29 29 29 U U A . n A 1 30 G 30 30 30 G G A . n A 1 31 C 31 31 31 C C A . n A 1 32 C 32 32 32 C C A . n A 1 33 A 33 33 33 A A A . n A 1 34 G 34 34 34 G G A . n A 1 35 U 35 35 35 U U A . n A 1 36 C 36 36 36 C C A . n A 1 37 G 37 37 37 G G A . n A 1 38 C 38 38 38 C C A . n A 1 39 A 39 39 39 A A A . n A 1 40 G 40 40 40 G G A . n A 1 41 G 41 41 41 G G A . n A 1 42 C 42 42 42 C C A . n A 1 43 G 43 43 43 G G A . n A 1 44 A 44 44 44 A A A . n A 1 45 A 45 45 45 A A A . n A 1 46 A 46 46 46 A A A . n A 1 47 C 47 47 47 C C A . n A 1 48 G 48 48 48 G G A . n A 1 49 A 49 49 49 A A A . n A 1 50 U 50 50 50 U U A . n A 1 51 C 51 51 51 C C A . n A 1 52 C 52 52 52 C C A . n A 1 53 A 53 53 53 A A A . n A 1 54 C 54 54 54 C C A . n A 1 55 A 55 55 55 A A A . n A 1 56 U 56 56 56 U U A . n A 1 57 A 57 57 57 A A A . n A 1 58 A 58 58 58 A A A . n A 1 59 G 59 59 59 G G A . n A 1 60 C 60 60 60 C C A . n A 1 61 G 61 61 61 G G A . n A 1 62 G 62 62 62 G G A . n A 1 63 G 63 63 63 G G A . n A 1 64 G 64 64 64 G G A . n A 1 65 C 65 65 65 C C A . n A 1 66 A 66 66 66 A A A . n A 1 67 A 67 67 67 A A A . n A 1 68 A 68 68 68 A A A . n A 1 69 G 69 69 69 G G A . n A 1 70 U 70 70 70 U U A . n A 1 71 U 71 71 71 U U A . n A 1 72 C 72 72 72 C C A . n A 1 73 C 73 73 73 C C A . n A 1 74 C 74 74 74 C C A . n A 1 75 G 75 75 75 G G A . n A 1 76 U 76 76 76 U U A . n A 1 77 G 77 77 77 G G A . n A 1 78 A 78 78 78 A A A . n A 1 79 G 79 79 79 G G A . n A 1 80 C 80 80 80 C C A . n A 1 81 A 81 81 81 A A A . n A 1 82 U 82 82 82 U U A . n A 1 83 G 83 83 83 G G A . n A 1 84 G 84 84 84 G G A . n A 1 85 U 85 85 85 U U A . n A 1 86 G 86 86 86 G G A . n A 1 87 C 87 87 87 C C A . n A 1 88 G 88 88 88 G G A . n A 1 89 G 89 89 89 G G A . n A 1 90 C 90 90 90 C C A . n A 1 91 U 91 91 91 U U A . n A 1 92 U 92 92 92 U U A . n A 1 93 A 93 93 93 A A A . n A 1 94 G 94 94 94 G G A . n A 1 95 A 95 95 95 A A A . n A 1 96 U 96 96 96 U U A . n A 1 97 G 97 97 97 G G A . n A 1 98 U 98 98 98 U U A . n A 1 99 A 99 99 99 A A A . n A 1 100 A 100 100 100 A A A . n A 1 101 G 101 101 101 G G A . n A 1 102 U 102 102 102 U U A . n A 1 103 C 103 103 103 C C A . n A 1 104 C 104 104 104 C C A . n A 1 105 U 105 105 105 U U A . n A 1 106 G 106 106 106 G G A . n A 1 107 U 107 107 107 U U A . n A 1 108 C 108 108 108 C C A . n A 1 109 G 109 109 109 G G A . n A 1 110 U 110 110 110 U U A . n A 1 111 G 111 111 111 G G A . n A 1 112 C 112 112 112 C C A . n A 1 113 G 113 113 113 G G A . n A 1 114 G 114 114 114 G G A . n A 1 115 C 115 115 115 C C A . n A 1 116 A 116 116 116 A A A . n A 1 117 U 117 117 117 U U A . n A 1 118 U 118 118 118 U U A . n A 1 119 C 119 119 119 C C A . n A 1 120 C 120 120 120 C C A . n A 1 121 G 121 121 121 G G A . n A 1 122 A 122 122 122 A A A . n A 1 123 A 123 123 123 A A A . n A 1 124 U 124 124 124 U U A . n A 1 125 C 125 125 125 C C A . n A 1 126 G 126 126 126 G G A . n A 1 127 A 127 127 127 A A A . n A 1 128 A 128 128 128 A A A . n A 1 129 U 129 129 129 U U A . n A 1 130 G 130 130 130 G G A . n A 1 131 C 131 131 131 C C A . n A 1 132 G 132 132 132 G G A . n A 1 133 G 133 133 133 G G A . n A 1 134 U 134 134 134 U U A . n A 1 135 G 135 135 135 G G A . n A 1 136 C 136 136 136 C C A . n A 1 137 G 137 137 137 G G A . n A 1 138 A 138 138 138 A A A . n A 1 139 G 139 139 139 G G A . n A 1 140 A 140 140 140 A A A . n A 1 141 G 141 141 141 G G A . n A 1 142 U 142 142 142 U U A . n A 1 143 G 143 143 143 G G A . n A 1 144 G 144 144 144 G G A . n A 1 145 C 145 145 145 C C A . n A 1 146 A 146 146 146 A A A . n A 1 147 G 147 147 147 G G A . n A 1 148 U 148 148 148 U U A . n A 1 149 A 149 149 149 A A A . n A 1 150 G 150 150 150 G G A . n A 1 151 U 151 151 151 U U A . n A 1 152 G 152 152 152 G G A . n A 1 153 G 153 153 153 G G A . n A 1 154 G 154 154 154 G G A . n A 1 155 C 155 155 155 C C A . n A 1 156 G 156 156 156 G G A . n A 1 157 G 157 157 157 G G A . n A 1 158 C 158 158 158 C C A . n A 1 159 G 159 159 159 G G A . n A 1 160 U 160 160 160 U U A . n A 1 161 A 161 161 161 A A A . n A 1 162 A 162 162 162 A A A . n A 1 163 A 163 163 163 A A A . n A 1 164 G 164 164 164 G G A . n A 1 165 C 165 165 165 C C A . n A 1 166 U 166 166 166 U U A . n A 1 167 C 167 167 167 C C A . n A 1 168 A 168 168 168 A A A . n A 1 169 G 169 169 169 G G A . n A 1 170 U 170 170 170 U U A . n A 1 171 A 171 171 171 A A A . n A 1 172 G 172 172 172 G G A . n A 1 173 C 173 173 173 C C A . n A 1 174 G 174 174 174 G G A . n A 1 175 A 175 175 175 A A A . n A 1 176 A 176 176 176 A A A . n A 1 177 C 177 177 177 C C A . n A 1 178 C 178 178 178 C C A . n A 1 179 C 179 179 179 C C A . n A 1 180 A 180 180 180 A A A . n A 1 181 C 181 181 181 C C A . n A 1 182 C 182 182 182 C C A . n A 1 183 G 183 183 183 G G A . n A 1 184 A 184 184 184 A A A . n A 1 185 C 185 185 185 C C A . n A 1 186 A 186 186 186 A A A . n A 1 187 G 187 187 187 G G A . n A 1 188 G 188 188 188 G G A . n A 1 189 C 189 189 189 C C A . n A 1 190 G 190 190 190 G G A . n A 1 191 A 191 191 191 A A A . n A 1 192 G 192 192 192 G G A . n A 1 193 U 193 193 193 U U A . n A 1 194 G 194 194 194 G G A . n A 1 195 U 195 195 195 U U A . n A 1 196 G 196 196 196 G G A . n A 1 197 G 197 197 197 G G A . n A 1 198 G 198 198 198 G G A . n A 1 199 G 199 199 199 G G A . n A 1 200 G 200 200 200 G G A . n A 1 201 C 201 201 201 C C A . n A 1 202 A 202 202 202 A A A . n A 1 203 A 203 203 203 A A A . n A 1 204 A 204 204 204 A A A . n A 1 205 A 205 205 205 A A A . n A 1 206 A 206 206 206 A A A . n A 1 207 C 207 207 207 C C A . n A 1 208 C 208 208 208 C C A . n A 1 209 A 209 209 209 A A A . n A 1 210 G 210 210 210 G G A . n A 1 211 G 211 211 211 G G A . n A 1 212 U 212 212 212 U U A . n A 1 213 C 213 213 213 C C A . n A 1 214 A 214 214 214 A A A . n A 1 215 G 215 215 215 G G A . n A 1 216 C 216 216 216 C C A . n A 1 217 C 217 217 217 C C A . n A 1 218 G 218 218 218 G G A . n A 1 219 A 219 219 219 A A A . n A 1 220 C 220 220 220 C C A . n A 1 221 U 221 221 221 U U A . n A 1 222 C 222 222 222 C C A . n A 1 223 C 223 223 223 C C A . n A 1 224 A 224 224 224 A A A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9G7C _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9G7C _struct.title 'Cryo-EM structure of raiA ncRNA from Clostridium reveals a new RNA 3D fold' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9G7C _struct_keywords.text 'ncRNA, raiA, RNA' _struct_keywords.pdbx_keywords RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9G7C _struct_ref.pdbx_db_accession 9G7C _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9G7C _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 224 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9G7C _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 224 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 224 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A A 224 N1 ? ? A G 1 A A 224 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog2 hydrog ? ? A G 1 O6 ? ? ? 1_555 A A 224 N6 ? ? A G 1 A A 224 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog3 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 223 O2 ? ? A G 2 A C 223 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog4 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 222 O2 ? ? A G 3 A C 222 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog5 hydrog ? ? A A 4 N1 ? ? ? 1_555 A U 221 N3 ? ? A A 4 A U 221 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog6 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 220 N3 ? ? A G 5 A C 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 220 O2 ? ? A G 5 A C 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 220 N4 ? ? A G 5 A C 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 219 N1 ? ? A U 6 A A 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 219 N6 ? ? A U 6 A A 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 218 N2 ? ? A C 7 A G 218 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog12 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 217 O2 ? ? A G 8 A C 217 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog13 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 216 N3 ? ? A G 9 A C 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 216 O2 ? ? A G 9 A C 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 216 N4 ? ? A G 9 A C 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 10 N1 ? ? ? 1_555 A G 14 O6 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A G 10 N2 ? ? ? 1_555 A G 14 N7 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 213 N4 ? ? A G 10 A C 213 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog19 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 215 N2 ? ? A C 12 A G 215 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog20 hydrog ? ? A U 13 N3 ? ? ? 1_555 A A 214 N1 ? ? A U 13 A A 214 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog21 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 213 N3 ? ? A G 14 A C 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 213 O2 ? ? A G 14 A C 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 213 N4 ? ? A G 14 A C 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 208 N3 ? ? A G 16 A C 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 208 O2 ? ? A G 16 A C 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 208 N4 ? ? A G 16 A C 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 207 N3 ? ? A G 17 A C 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 207 O2 ? ? A G 17 A C 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 207 N4 ? ? A G 17 A C 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 18 N3 ? ? ? 1_555 A A 206 N1 ? ? A U 18 A A 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 18 O4 ? ? ? 1_555 A A 206 N6 ? ? A U 18 A A 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 19 N3 ? ? ? 1_555 A A 23 N1 ? ? A U 19 A A 23 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog33 hydrog ? ? A G 20 N2 ? ? ? 1_555 A A 203 N7 ? ? A G 20 A A 203 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog34 hydrog ? ? A G 20 N3 ? ? ? 1_555 A A 203 N6 ? ? A G 20 A A 203 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog35 hydrog ? ? A G 24 N1 ? ? ? 1_555 A U 50 O2 ? ? A G 24 A U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog36 hydrog ? ? A G 24 O6 ? ? ? 1_555 A U 50 N3 ? ? A G 24 A U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog37 hydrog ? ? A U 25 N3 ? ? ? 1_555 A A 49 N1 ? ? A U 25 A A 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 25 O4 ? ? ? 1_555 A A 49 N6 ? ? A U 25 A A 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 26 N3 ? ? ? 1_555 A G 48 N1 ? ? A C 26 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 26 N4 ? ? ? 1_555 A G 48 O6 ? ? A C 26 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 26 O2 ? ? ? 1_555 A G 48 N2 ? ? A C 26 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 47 N3 ? ? A G 27 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 27 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 47 N4 ? ? A G 27 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A A 28 N1 ? ? ? 1_555 A A 45 N6 ? ? A A 28 A A 45 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog46 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 42 N3 ? ? A G 30 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 42 O2 ? ? A G 30 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 42 N4 ? ? A G 30 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 31 N3 ? ? ? 1_555 A G 41 N1 ? ? A C 31 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 31 N4 ? ? ? 1_555 A G 41 O6 ? ? A C 31 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 31 O2 ? ? ? 1_555 A G 41 N2 ? ? A C 31 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 40 N1 ? ? A C 32 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 40 O6 ? ? A C 32 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 40 N2 ? ? A C 32 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 34 N2 ? ? ? 1_555 A A 58 N3 ? ? A G 34 A A 58 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog56 hydrog ? ? A G 34 O6 ? ? ? 1_555 A C 90 N4 ? ? A G 34 A C 90 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog57 hydrog ? ? A U 35 N3 ? ? ? 1_555 A G 89 O6 ? ? A U 35 A G 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog58 hydrog ? ? A U 35 O2 ? ? ? 1_555 A G 89 N1 ? ? A U 35 A G 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog59 hydrog ? ? A C 36 N3 ? ? ? 1_555 A G 88 N1 ? ? A C 36 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 36 N4 ? ? ? 1_555 A G 88 O6 ? ? A C 36 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 36 O2 ? ? ? 1_555 A G 88 N2 ? ? A C 36 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 37 N1 ? ? ? 1_555 A C 87 N3 ? ? A G 37 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 37 N2 ? ? ? 1_555 A C 87 O2 ? ? A G 37 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 37 O6 ? ? ? 1_555 A C 87 N4 ? ? A G 37 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 38 N3 ? ? ? 1_555 A G 86 N1 ? ? A C 38 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 38 N4 ? ? ? 1_555 A G 86 O6 ? ? A C 38 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 38 O2 ? ? ? 1_555 A G 86 N2 ? ? A C 38 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A A 39 N1 ? ? ? 1_555 A U 85 N3 ? ? A A 39 A U 85 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog69 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 41 A C 47 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog70 hydrog ? ? A C 52 N3 ? ? ? 1_555 A G 196 N1 ? ? A C 52 A G 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 52 N4 ? ? ? 1_555 A G 196 O6 ? ? A C 52 A G 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 52 O2 ? ? ? 1_555 A G 196 N2 ? ? A C 52 A G 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 54 N3 ? ? ? 1_555 A G 194 N1 ? ? A C 54 A G 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 54 N4 ? ? ? 1_555 A G 194 O6 ? ? A C 54 A G 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 54 O2 ? ? ? 1_555 A G 194 N2 ? ? A C 54 A G 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A A 58 N6 ? ? ? 1_555 A G 77 N3 ? ? A A 58 A G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog77 hydrog ? ? A A 58 N7 ? ? ? 1_555 A G 77 N2 ? ? A A 58 A G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog78 hydrog ? ? A G 59 N1 ? ? ? 1_555 A U 76 O2 ? ? A G 59 A U 76 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog79 hydrog ? ? A C 60 O2 ? ? ? 1_555 A G 75 N2 ? ? A C 60 A G 75 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog80 hydrog ? ? A G 61 N2 ? ? ? 1_555 A C 74 O2 ? ? A G 61 A C 74 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog81 hydrog ? ? A G 62 N2 ? ? ? 1_555 A C 73 O2 ? ? A G 62 A C 73 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog82 hydrog ? ? A G 63 N2 ? ? ? 1_555 A C 72 O2 ? ? A G 63 A C 72 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog83 hydrog ? ? A G 64 N2 ? ? ? 1_555 A U 71 O2 ? ? A G 64 A U 71 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog84 hydrog ? ? A C 65 N3 ? ? ? 1_555 A G 69 N1 ? ? A C 65 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 65 N4 ? ? ? 1_555 A G 69 O6 ? ? A C 65 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A C 65 O2 ? ? ? 1_555 A G 69 N2 ? ? A C 65 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A A 78 N6 ? ? ? 1_555 A U 92 O4 ? ? A A 78 A U 92 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog88 hydrog ? ? A A 78 N7 ? ? ? 1_555 A U 92 N3 ? ? A A 78 A U 92 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog89 hydrog ? ? A G 79 N2 ? ? ? 1_555 A G 194 N7 ? ? A G 79 A G 194 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog90 hydrog ? ? A C 80 N4 ? ? ? 1_555 A U 195 O4 ? ? A C 80 A U 195 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog91 hydrog ? ? A A 81 N1 ? ? ? 1_555 A G 198 N2 ? ? A A 81 A G 198 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog92 hydrog ? ? A U 82 O4 ? ? ? 1_555 A G 200 N2 ? ? A U 82 A G 200 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog93 hydrog ? ? A A 95 N6 ? ? ? 1_555 A G 192 N3 ? ? A A 95 A G 192 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog94 hydrog ? ? A A 95 N7 ? ? ? 1_555 A G 192 N2 ? ? A A 95 A G 192 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog95 hydrog ? ? A U 96 N3 ? ? ? 1_555 A A 191 N1 ? ? A U 96 A A 191 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A U 96 O4 ? ? ? 1_555 A A 191 N6 ? ? A U 96 A A 191 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A A 100 N3 ? ? ? 1_555 A G 188 N2 ? ? A A 100 A G 188 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog98 hydrog ? ? A G 101 N2 ? ? ? 1_555 A C 189 O2 ? ? A G 101 A C 189 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog99 hydrog ? ? A C 103 O2 ? ? ? 1_555 A G 188 N2 ? ? A C 103 A G 188 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog100 hydrog ? ? A C 104 N3 ? ? ? 1_555 A G 187 N1 ? ? A C 104 A G 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A C 104 N4 ? ? ? 1_555 A G 187 O6 ? ? A C 104 A G 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 104 O2 ? ? ? 1_555 A G 187 N2 ? ? A C 104 A G 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A U 105 N3 ? ? ? 1_555 A A 186 N1 ? ? A U 105 A A 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A U 105 O4 ? ? ? 1_555 A A 186 N6 ? ? A U 105 A A 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A G 106 N1 ? ? ? 1_555 A C 185 N3 ? ? A G 106 A C 185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A G 106 N2 ? ? ? 1_555 A C 185 O2 ? ? A G 106 A C 185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A G 106 O6 ? ? ? 1_555 A C 185 N4 ? ? A G 106 A C 185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A C 108 N3 ? ? ? 1_555 A G 137 N1 ? ? A C 108 A G 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A C 108 N4 ? ? ? 1_555 A G 137 O6 ? ? A C 108 A G 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A C 108 O2 ? ? ? 1_555 A G 137 N2 ? ? A C 108 A G 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A G 109 N1 ? ? ? 1_555 A C 136 N3 ? ? A G 109 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A G 109 N2 ? ? ? 1_555 A C 136 O2 ? ? A G 109 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A G 109 O6 ? ? ? 1_555 A C 136 N4 ? ? A G 109 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A U 110 N3 ? ? ? 1_555 A G 135 O6 ? ? A U 110 A G 135 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog115 hydrog ? ? A U 110 O2 ? ? ? 1_555 A G 135 N1 ? ? A U 110 A G 135 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog116 hydrog ? ? A G 111 N1 ? ? ? 1_555 A U 134 O2 ? ? A G 111 A U 134 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog117 hydrog ? ? A G 111 O6 ? ? ? 1_555 A U 134 N3 ? ? A G 111 A U 134 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog118 hydrog ? ? A C 112 N3 ? ? ? 1_555 A G 133 N1 ? ? A C 112 A G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A C 112 N4 ? ? ? 1_555 A G 133 O6 ? ? A C 112 A G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? A C 112 O2 ? ? ? 1_555 A G 133 N2 ? ? A C 112 A G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? A C 115 N3 ? ? ? 1_555 A G 130 N1 ? ? A C 115 A G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? A C 115 N4 ? ? ? 1_555 A G 130 O6 ? ? A C 115 A G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? A C 115 O2 ? ? ? 1_555 A G 130 N2 ? ? A C 115 A G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A A 116 N1 ? ? ? 1_555 A U 129 N3 ? ? A A 116 A U 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A A 116 N6 ? ? ? 1_555 A U 129 O4 ? ? A A 116 A U 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A U 117 N3 ? ? ? 1_555 A A 128 N1 ? ? A U 117 A A 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A U 117 O4 ? ? ? 1_555 A A 128 N6 ? ? A U 117 A A 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A U 118 N3 ? ? ? 1_555 A A 127 N1 ? ? A U 118 A A 127 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog129 hydrog ? ? A C 119 N3 ? ? ? 1_555 A G 126 N1 ? ? A C 119 A G 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A C 119 N4 ? ? ? 1_555 A G 126 O6 ? ? A C 119 A G 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A C 119 O2 ? ? ? 1_555 A G 126 N2 ? ? A C 119 A G 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A C 120 N3 ? ? ? 1_555 A G 126 N1 ? ? A C 120 A G 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A C 120 N4 ? ? ? 1_555 A G 126 O6 ? ? A C 120 A G 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? A C 120 O2 ? ? ? 1_555 A G 126 N2 ? ? A C 120 A G 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A G 139 N2 ? ? ? 1_555 A C 182 O2 ? ? A G 139 A C 182 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog136 hydrog ? ? A A 140 N6 ? ? ? 1_555 A G 190 N3 ? ? A A 140 A G 190 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog137 hydrog ? ? A A 140 N7 ? ? ? 1_555 A G 190 N2 ? ? A A 140 A G 190 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog138 hydrog ? ? A G 141 N1 ? ? ? 1_555 A C 181 N3 ? ? A G 141 A C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A G 141 N2 ? ? ? 1_555 A C 181 O2 ? ? A G 141 A C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A G 141 O6 ? ? ? 1_555 A C 181 N4 ? ? A G 141 A C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A U 142 N3 ? ? ? 1_555 A A 180 N1 ? ? A U 142 A A 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A U 142 O4 ? ? ? 1_555 A A 180 N6 ? ? A U 142 A A 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A G 143 N1 ? ? ? 1_555 A C 179 N3 ? ? A G 143 A C 179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A G 143 N2 ? ? ? 1_555 A C 179 O2 ? ? A G 143 A C 179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A G 143 O6 ? ? ? 1_555 A C 179 N4 ? ? A G 143 A C 179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A G 144 N1 ? ? ? 1_555 A C 178 N3 ? ? A G 144 A C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A G 144 N2 ? ? ? 1_555 A C 178 O2 ? ? A G 144 A C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A G 144 O6 ? ? ? 1_555 A C 178 N4 ? ? A G 144 A C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? A C 145 O2 ? ? ? 1_555 A C 177 N4 ? ? A C 145 A C 177 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog150 hydrog ? ? A U 148 N3 ? ? ? 1_555 A A 175 N7 ? ? A U 148 A A 175 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog151 hydrog ? ? A G 150 N1 ? ? ? 1_555 A C 173 N3 ? ? A G 150 A C 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? A G 150 N2 ? ? ? 1_555 A C 173 O2 ? ? A G 150 A C 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog153 hydrog ? ? A G 150 O6 ? ? ? 1_555 A C 173 N4 ? ? A G 150 A C 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? A U 151 N3 ? ? ? 1_555 A G 172 O6 ? ? A U 151 A G 172 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog155 hydrog ? ? A U 151 O2 ? ? ? 1_555 A G 172 N1 ? ? A U 151 A G 172 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog156 hydrog ? ? A G 152 N2 ? ? ? 1_555 A A 171 N7 ? ? A G 152 A A 171 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog157 hydrog ? ? A G 152 N3 ? ? ? 1_555 A A 171 N6 ? ? A G 152 A A 171 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog158 hydrog ? ? A C 155 N4 ? ? ? 1_555 A C 167 N3 ? ? A C 155 A C 167 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog159 hydrog ? ? A G 156 N1 ? ? ? 1_555 A U 166 O2 ? ? A G 156 A U 166 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog160 hydrog ? ? A G 156 O6 ? ? ? 1_555 A U 166 N3 ? ? A G 156 A U 166 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog161 hydrog ? ? A G 157 N1 ? ? ? 1_555 A C 165 N3 ? ? A G 157 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? A G 157 N2 ? ? ? 1_555 A C 165 O2 ? ? A G 157 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? A G 157 O6 ? ? ? 1_555 A C 165 N4 ? ? A G 157 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? A C 158 N3 ? ? ? 1_555 A G 164 N1 ? ? A C 158 A G 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? A C 158 N4 ? ? ? 1_555 A G 164 O6 ? ? A C 158 A G 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? A C 158 O2 ? ? ? 1_555 A G 164 N2 ? ? A C 158 A G 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? A G 159 N2 ? ? ? 1_555 A A 163 N7 ? ? A G 159 A A 163 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9G7C _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9G7C _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9G7C _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.27 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 208685 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '20 mM HEPES pH 7.5, 50 mM KCl, 50 mM NaCl, 1 mM MgCl2, 1 mM DTT' _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type CELL _em_entity_assembly.name 'raiA ncRNA' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9G7C _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 900 _em_imaging.nominal_defocus_max 2100 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 105000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R2/2' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9G7C _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 95 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9G7C _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # _em_admin.current_status REL _em_admin.deposition_date 2024-07-20 _em_admin.deposition_site PDBE _em_admin.entry_id 9G7C _em_admin.last_update 2024-11-13 _em_admin.map_release_date 2024-10-30 _em_admin.title 'Cryo-EM structure of raiA ncRNA from Clostridium reveals a new RNA 3D fold' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 1262775 _em_entity_assembly_naturalsource.organism 'Clostridium sp. CAG:138' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? 'UCSF ChimeraX' ? 'MODEL FITTING' ? 8 ? ? ? SimRNA ? 'MODEL FITTING' ? 9 ? ? ? QRNAS ? 'MODEL REFINEMENT' ? 10 ? ? ? Coot ? 'MODEL REFINEMENT' ? 11 ? ? ? PHENIX ? 'INITIAL EULER ASSIGNMENT' ? 12 1 ? ? cryoSPARC ? 'FINAL EULER ASSIGNMENT' ? 13 1 ? ? cryoSPARC ? CLASSIFICATION ? 14 1 ? ? cryoSPARC ? RECONSTRUCTION ? 15 1 ? ? cryoSPARC ? 'VOLUME SELECTION' ? 16 1 1 1 ? ? 'SERIES ALIGNMENT' ? 17 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 18 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 19 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 20 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 21 1 1 1 ? ? # _em_specimen.concentration 1.9 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9G7C 'double helix' 9G7C 'a-form double helix' 9G7C 'parallel strands' 9G7C 'hairpin loop' 9G7C 'bulge loop' 9G7C 'mismatched base pair' 9G7C 'internal loop' 9G7C 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A A 224 1_555 -0.289 1.134 -0.898 13.464 -11.295 -15.030 1 A_G1:A224_A A 1 ? A 224 ? 8 1 1 A G 2 1_555 A C 223 1_555 -0.050 0.810 -0.599 -4.334 -3.824 7.376 2 A_G2:C223_A A 2 ? A 223 ? ? 1 1 A G 3 1_555 A C 222 1_555 -0.145 0.636 -0.659 -3.410 0.111 7.547 3 A_G3:C222_A A 3 ? A 222 ? ? 1 1 A A 4 1_555 A U 221 1_555 0.000 0.636 -0.525 -2.199 -7.506 6.387 4 A_A4:U221_A A 4 ? A 221 ? ? ? 1 A G 5 1_555 A C 220 1_555 0.036 0.437 -0.520 -5.117 -6.670 6.321 5 A_G5:C220_A A 5 ? A 220 ? 19 1 1 A U 6 1_555 A A 219 1_555 -0.569 0.398 -0.717 3.213 -13.089 -1.369 6 A_U6:A219_A A 6 ? A 219 ? 20 1 1 A C 7 1_555 A G 218 1_555 -0.041 0.778 -0.510 3.934 -4.991 7.980 7 A_C7:G218_A A 7 ? A 218 ? ? 1 1 A G 8 1_555 A C 217 1_555 0.616 0.849 -0.300 -9.641 -10.014 9.623 8 A_G8:C217_A A 8 ? A 217 ? ? 1 1 A G 9 1_555 A C 216 1_555 -0.016 0.675 -0.074 -12.655 -11.896 2.142 9 A_G9:C216_A A 9 ? A 216 ? 19 1 1 A C 12 1_555 A G 215 1_555 0.220 0.505 -0.530 10.107 -21.651 13.068 10 A_C12:G215_A A 12 ? A 215 ? ? 1 1 A U 13 1_555 A A 214 1_555 -0.120 0.528 0.017 -3.036 -1.719 11.062 11 A_U13:A214_A A 13 ? A 214 ? ? ? 1 A G 14 1_555 A C 213 1_555 0.845 -0.064 -0.339 0.063 2.674 0.519 12 A_G14:C213_A A 14 ? A 213 ? 19 1 1 A G 16 1_555 A C 208 1_555 -0.204 0.383 -0.297 -7.964 -7.086 2.958 13 A_G16:C208_A A 16 ? A 208 ? 19 1 1 A G 17 1_555 A C 207 1_555 -0.301 -0.108 -0.574 -5.809 -10.471 4.659 14 A_G17:C207_A A 17 ? A 207 ? 19 1 1 A U 18 1_555 A A 206 1_555 -0.702 0.426 -0.600 -7.364 -19.397 -0.050 15 A_U18:A206_A A 18 ? A 206 ? 20 1 1 A U 19 1_555 A A 23 1_555 -0.172 1.769 -0.579 -8.076 -16.879 164.157 16 A_U19:A23_A A 19 ? A 23 ? ? 2 1 A G 20 1_555 A A 203 1_555 6.335 -4.647 1.180 11.801 29.294 -15.208 17 A_G20:A203_A A 20 ? A 203 ? 11 10 1 A G 24 1_555 A U 50 1_555 -2.394 -0.418 0.946 15.383 -26.584 -0.465 18 A_G24:U50_A A 24 ? A 50 ? 28 1 1 A U 25 1_555 A A 49 1_555 -0.041 0.109 -0.065 3.092 -25.451 -0.255 19 A_U25:A49_A A 25 ? A 49 ? 20 1 1 A C 26 1_555 A G 48 1_555 -0.018 0.445 0.383 -3.856 -9.710 6.389 20 A_C26:G48_A A 26 ? A 48 ? 19 1 1 A G 27 1_555 A C 47 1_555 0.902 0.578 0.399 1.506 -19.355 -4.839 21 A_G27:C47_A A 27 ? A 47 ? 19 1 1 A A 28 1_555 A A 45 1_555 -1.648 0.495 -1.316 -24.754 -5.801 177.061 22 A_A28:A45_A A 28 ? A 45 ? ? ? 1 A C 54 1_555 A G 194 1_555 -0.451 0.088 -0.568 17.691 -16.147 0.408 23 A_C54:G194_A A 54 ? A 194 ? 19 1 1 A C 80 1_555 A U 195 1_555 -1.642 6.929 1.500 -18.692 26.568 -179.244 24 A_C80:U195_A A 80 ? A 195 ? ? ? 1 A C 52 1_555 A G 196 1_555 -0.315 -0.481 -0.496 -10.164 5.198 -4.275 25 A_C52:G196_A A 52 ? A 196 ? 19 1 1 A A 81 1_555 A G 198 1_555 -1.816 3.875 -2.449 13.529 4.663 134.518 26 A_A81:G198_A A 81 ? A 198 ? ? ? 1 A A 58 1_555 A G 77 1_555 -6.841 -3.774 -0.008 12.407 1.591 -2.818 27 A_A58:G77_A A 58 ? A 77 ? 11 9 1 A G 59 1_555 A U 76 1_555 -2.989 0.328 -0.792 5.690 -11.094 15.100 28 A_G59:U76_A A 59 ? A 76 ? ? ? 1 A C 60 1_555 A G 75 1_555 -0.330 0.839 -0.701 8.079 -10.706 16.113 29 A_C60:G75_A A 60 ? A 75 ? ? 1 1 A G 61 1_555 A C 74 1_555 -0.400 0.796 -0.210 -8.966 -5.066 13.472 30 A_G61:C74_A A 61 ? A 74 ? ? 1 1 A G 62 1_555 A C 73 1_555 0.200 0.965 -0.197 -7.638 -5.150 11.651 31 A_G62:C73_A A 62 ? A 73 ? ? 1 1 A G 63 1_555 A C 72 1_555 0.586 0.838 -0.186 -6.531 -11.851 8.541 32 A_G63:C72_A A 63 ? A 72 ? ? 1 1 A G 64 1_555 A U 71 1_555 0.773 0.141 0.222 -6.290 -16.734 2.494 33 A_G64:U71_A A 64 ? A 71 ? ? 1 1 A C 65 1_555 A G 69 1_555 -0.463 0.169 -1.197 20.702 -6.043 7.238 34 A_C65:G69_A A 65 ? A 69 ? 19 1 1 A G 30 1_555 A C 42 1_555 0.182 0.007 -0.552 -12.643 8.619 -0.564 35 A_G30:C42_A A 30 ? A 42 ? 19 1 1 A C 31 1_555 A G 41 1_555 0.116 -0.025 -0.438 2.700 1.284 -7.557 36 A_C31:G41_A A 31 ? A 41 ? 19 1 1 A C 32 1_555 A G 40 1_555 0.130 0.394 -0.650 3.531 2.590 4.427 37 A_C32:G40_A A 32 ? A 40 ? 19 1 1 A U 85 1_555 A A 39 1_555 -0.266 0.750 -0.592 0.283 6.517 16.249 38 A_U85:A39_A A 85 ? A 39 ? ? ? 1 A G 86 1_555 A C 38 1_555 -0.893 0.097 -0.208 -0.181 4.845 2.465 39 A_G86:C38_A A 86 ? A 38 ? 19 1 1 A C 87 1_555 A G 37 1_555 0.380 0.124 -0.408 4.958 0.882 2.378 40 A_C87:G37_A A 87 ? A 37 ? 19 1 1 A G 88 1_555 A C 36 1_555 -0.119 -0.096 0.019 1.474 -8.262 6.336 41 A_G88:C36_A A 88 ? A 36 ? 19 1 1 A G 89 1_555 A U 35 1_555 -1.125 -0.107 -0.476 -5.599 -17.459 -5.706 42 A_G89:U35_A A 89 ? A 35 ? 28 1 1 A C 90 1_555 A G 34 1_555 0.622 0.192 -0.632 -5.650 -18.271 -11.323 43 A_C90:G34_A A 90 ? A 34 ? ? 1 1 A U 92 1_555 A A 78 1_555 -1.040 2.360 1.712 25.683 1.215 -77.217 44 A_U92:A78_A A 92 ? A 78 ? 23 3 1 A U 82 1_555 A G 200 1_555 -6.819 -3.161 -0.506 6.081 -16.569 33.533 45 A_U82:G200_A A 82 ? A 200 ? ? ? 1 A A 95 1_555 A G 192 1_555 -6.688 -2.785 -1.636 13.007 3.625 -10.265 46 A_A95:G192_A A 95 ? A 192 ? 11 9 1 A U 96 1_555 A A 191 1_555 0.457 -0.206 -1.312 5.918 -25.719 -14.223 47 A_U96:A191_A A 96 ? A 191 ? 20 1 1 A G 133 1_555 A C 112 1_555 0.911 0.646 0.257 -10.682 0.984 3.136 48 A_G133:C112_A A 133 ? A 112 ? 19 1 1 A U 134 1_555 A G 111 1_555 2.182 -0.016 0.292 1.240 -6.774 11.033 49 A_U134:G111_A A 134 ? A 111 ? 28 1 1 A G 135 1_555 A U 110 1_555 -2.385 -0.260 -0.351 -2.063 -7.379 1.413 50 A_G135:U110_A A 135 ? A 110 ? 28 1 1 A C 136 1_555 A G 109 1_555 0.947 0.301 -0.525 4.338 -6.444 5.934 51 A_C136:G109_A A 136 ? A 109 ? 19 1 1 A G 137 1_555 A C 108 1_555 0.004 0.424 0.062 -5.556 -16.287 12.371 52 A_G137:C108_A A 137 ? A 108 ? 19 1 1 A C 185 1_555 A G 106 1_555 -0.301 0.121 -0.234 1.859 -1.745 1.095 53 A_C185:G106_A A 185 ? A 106 ? 19 1 1 A A 186 1_555 A U 105 1_555 0.223 0.201 -0.132 -4.286 -11.730 0.038 54 A_A186:U105_A A 186 ? A 105 ? 20 1 1 A G 187 1_555 A C 104 1_555 -0.030 0.361 -0.270 -7.830 -9.821 5.199 55 A_G187:C104_A A 187 ? A 104 ? 19 1 1 A G 188 1_555 A C 103 1_555 -1.429 0.725 -1.134 -11.754 -10.265 10.026 56 A_G188:C103_A A 188 ? A 103 ? ? ? 1 A C 189 1_555 A G 101 1_555 1.498 0.254 -1.499 -7.371 -18.376 16.832 57 A_C189:G101_A A 189 ? A 101 ? ? ? 1 A G 190 1_555 A A 140 1_555 6.605 -4.030 0.783 -15.992 -21.824 -19.736 58 A_G190:A140_A A 190 ? A 140 ? 11 10 1 A C 115 1_555 A G 130 1_555 -0.060 0.495 0.261 9.740 -15.875 8.090 59 A_C115:G130_A A 115 ? A 130 ? 19 1 1 A A 116 1_555 A U 129 1_555 -0.132 0.262 -0.217 -2.386 -10.500 3.409 60 A_A116:U129_A A 116 ? A 129 ? 20 1 1 A U 117 1_555 A A 128 1_555 0.172 0.444 -0.254 5.394 -9.862 5.872 61 A_U117:A128_A A 117 ? A 128 ? 20 1 1 A U 118 1_555 A A 127 1_555 0.159 0.603 -0.259 4.964 -10.410 6.264 62 A_U118:A127_A A 118 ? A 127 ? ? ? 1 A C 119 1_555 A G 126 1_555 0.330 0.422 -0.946 6.453 -5.987 1.619 63 A_C119:G126_A A 119 ? A 126 ? 19 1 1 A G 139 1_555 A C 182 1_555 -0.715 1.004 0.844 -7.385 -10.281 5.924 64 A_G139:C182_A A 139 ? A 182 ? ? ? 1 A G 141 1_555 A C 181 1_555 -0.587 0.034 0.057 15.671 -23.053 -8.520 65 A_G141:C181_A A 141 ? A 181 ? 19 1 1 A U 142 1_555 A A 180 1_555 -0.138 0.138 -0.001 7.601 -16.923 4.428 66 A_U142:A180_A A 142 ? A 180 ? 20 1 1 A G 143 1_555 A C 179 1_555 -0.201 0.375 -0.341 -5.747 -4.229 11.498 67 A_G143:C179_A A 143 ? A 179 ? 19 1 1 A G 144 1_555 A C 178 1_555 0.180 0.119 -0.548 -6.812 -10.466 2.618 68 A_G144:C178_A A 144 ? A 178 ? 19 1 1 A C 145 1_555 A C 177 1_555 6.969 -3.895 -0.262 -8.714 -12.549 -12.819 69 A_C145:C177_A A 145 ? A 177 ? ? ? 1 A U 148 1_555 A A 175 1_555 5.107 -3.199 -0.497 -1.655 -35.654 -104.762 70 A_U148:A175_A A 148 ? A 175 ? ? ? 1 A G 150 1_555 A C 173 1_555 -0.385 0.613 -0.111 -4.865 -9.485 0.727 71 A_G150:C173_A A 150 ? A 173 ? 19 1 1 A U 151 1_555 A G 172 1_555 1.606 0.275 -0.311 1.049 -12.520 -7.786 72 A_U151:G172_A A 151 ? A 172 ? 28 1 1 A G 152 1_555 A A 171 1_555 6.922 -4.127 0.509 0.213 -13.920 -24.252 73 A_G152:A171_A A 152 ? A 171 ? 11 10 1 A C 155 1_555 A C 167 1_555 -3.352 -1.293 0.890 16.305 0.935 -10.561 74 A_C155:C167_A A 155 ? A 167 ? ? 1 1 A G 156 1_555 A U 166 1_555 -2.964 -0.201 -0.429 10.135 -21.095 10.875 75 A_G156:U166_A A 156 ? A 166 ? 28 1 1 A G 157 1_555 A C 165 1_555 0.256 0.043 -1.143 -18.629 -19.183 -4.502 76 A_G157:C165_A A 157 ? A 165 ? 19 1 1 A C 158 1_555 A G 164 1_555 0.215 0.591 -0.588 -9.953 -6.374 4.703 77 A_C158:G164_A A 158 ? A 164 ? 19 1 1 A G 159 1_555 A A 163 1_555 7.138 -2.916 -1.236 12.345 39.325 -24.298 78 A_G159:A163_A A 159 ? A 163 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A A 224 1_555 A G 2 1_555 A C 223 1_555 1.277 -1.651 4.040 -1.993 11.473 33.020 -4.730 -2.471 3.225 19.448 3.378 34.959 1 AA_G1G2:C223A224_AA A 1 ? A 224 ? A 2 ? A 223 ? 1 A G 2 1_555 A C 223 1_555 A G 3 1_555 A C 222 1_555 -0.191 -1.502 3.283 -1.855 10.523 29.636 -4.600 0.029 2.617 19.780 3.487 31.462 2 AA_G2G3:C222C223_AA A 2 ? A 223 ? A 3 ? A 222 ? 1 A G 3 1_555 A C 222 1_555 A A 4 1_555 A U 221 1_555 -0.006 -1.399 3.236 -0.609 11.199 30.859 -4.248 -0.086 2.584 20.227 1.100 32.787 3 AA_G3A4:U221C222_AA A 3 ? A 222 ? A 4 ? A 221 ? 1 A A 4 1_555 A U 221 1_555 A G 5 1_555 A C 220 1_555 -0.171 -1.436 3.375 -1.534 8.780 30.387 -4.214 0.037 2.864 16.315 2.851 31.638 4 AA_A4G5:C220U221_AA A 4 ? A 221 ? A 5 ? A 220 ? 1 A G 5 1_555 A C 220 1_555 A U 6 1_555 A A 219 1_555 -0.426 -1.501 3.052 1.230 3.654 29.306 -3.643 1.071 2.828 7.183 -2.418 29.553 5 AA_G5U6:A219C220_AA A 5 ? A 220 ? A 6 ? A 219 ? 1 A U 6 1_555 A A 219 1_555 A C 7 1_555 A G 218 1_555 0.608 -1.307 3.231 -0.943 8.394 32.929 -3.498 -1.182 2.804 14.512 1.630 33.966 6 AA_U6C7:G218A219_AA A 6 ? A 219 ? A 7 ? A 218 ? 1 A C 7 1_555 A G 218 1_555 A G 8 1_555 A C 217 1_555 0.270 -1.352 3.669 0.563 11.190 32.444 -4.154 -0.364 3.054 19.322 -0.973 34.275 7 AA_C7G8:C217G218_AA A 7 ? A 218 ? A 8 ? A 217 ? 1 A G 8 1_555 A C 217 1_555 A G 9 1_555 A C 216 1_555 -0.503 -1.568 3.283 -0.438 8.884 29.897 -4.507 0.857 2.723 16.759 0.827 31.163 8 AA_G8G9:C216C217_AA A 8 ? A 217 ? A 9 ? A 216 ? 1 A G 9 1_555 A C 216 1_555 A C 12 1_555 A G 215 1_555 -0.983 -1.099 2.931 8.877 -1.652 43.830 -1.314 2.002 2.730 -2.185 -11.744 44.705 9 AA_G9C12:G215C216_AA A 9 ? A 216 ? A 12 ? A 215 ? 1 A C 12 1_555 A G 215 1_555 A U 13 1_555 A A 214 1_555 -0.293 -1.438 3.378 -4.738 17.535 31.365 -4.634 -0.153 2.302 29.540 7.981 36.131 10 AA_C12U13:A214G215_AA A 12 ? A 215 ? A 13 ? A 214 ? 1 A U 13 1_555 A A 214 1_555 A G 14 1_555 A C 213 1_555 -0.895 -1.122 3.129 1.809 14.880 33.183 -3.634 1.659 2.377 24.556 -2.985 36.325 11 AA_U13G14:C213A214_AA A 13 ? A 214 ? A 14 ? A 213 ? 1 A G 16 1_555 A C 208 1_555 A G 17 1_555 A C 207 1_555 0.906 -2.089 3.435 5.935 12.392 28.048 -6.132 -0.612 2.453 23.843 -11.418 31.171 12 AA_G16G17:C207C208_AA A 16 ? A 208 ? A 17 ? A 207 ? 1 A G 17 1_555 A C 207 1_555 A U 18 1_555 A A 206 1_555 -0.177 -1.543 3.324 1.962 7.339 32.174 -3.911 0.632 2.896 13.016 -3.480 33.035 13 AA_G17U18:A206C207_AA A 17 ? A 207 ? A 18 ? A 206 ? 1 A U 18 1_555 A A 206 1_555 A U 19 1_555 A A 23 1_555 -0.299 -1.519 3.806 0.946 4.632 -52.415 1.357 -0.264 3.922 -5.232 1.069 -52.613 14 AA_U18U19:A23A206_AA A 18 ? A 206 ? A 19 ? A 23 ? 1 A U 19 1_555 A A 23 1_555 A G 20 1_555 A A 203 1_555 0.298 -0.358 2.898 -8.697 11.173 124.519 -0.285 -0.233 2.861 6.303 4.906 124.978 15 AA_U19G20:A203A23_AA A 19 ? A 23 ? A 20 ? A 203 ? 1 A G 24 1_555 A U 50 1_555 A U 25 1_555 A A 49 1_555 -0.151 -1.098 3.912 1.162 4.639 43.991 -1.968 0.328 3.778 6.171 -1.546 44.237 16 AA_G24U25:A49U50_AA A 24 ? A 50 ? A 25 ? A 49 ? 1 A U 25 1_555 A A 49 1_555 A C 26 1_555 A G 48 1_555 0.387 -1.289 3.463 -1.617 6.923 33.844 -3.259 -0.906 3.125 11.731 2.740 34.562 17 AA_U25C26:G48A49_AA A 25 ? A 49 ? A 26 ? A 48 ? 1 A C 26 1_555 A G 48 1_555 A G 27 1_555 A C 47 1_555 -1.466 -1.559 3.380 -3.140 8.578 29.537 -4.578 2.148 2.958 16.339 5.981 30.887 18 AA_C26G27:C47G48_AA A 26 ? A 48 ? A 27 ? A 47 ? 1 A G 27 1_555 A C 47 1_555 A A 28 1_555 A A 45 1_555 0.120 -5.090 3.160 -159.510 26.721 98.806 -2.710 -0.959 1.793 13.720 81.899 168.142 19 AA_G27A28:A45C47_AA A 27 ? A 47 ? A 28 ? A 45 ? 1 A C 54 1_555 A G 194 1_555 A C 80 1_555 A U 195 1_555 1.539 2.901 -2.836 -1.227 13.696 -115.909 -1.578 0.917 -3.034 -8.064 -0.722 -116.425 20 AA_C54C80:U195G194_AA A 54 ? A 194 ? A 80 ? A 195 ? 1 A C 80 1_555 A U 195 1_555 A C 52 1_555 A G 196 1_555 -2.190 -1.607 -3.414 14.730 -22.458 64.655 -2.268 1.361 -3.156 -20.119 -13.196 69.449 21 AA_C80C52:G196U195_AA A 80 ? A 195 ? A 52 ? A 196 ? 1 A C 52 1_555 A G 196 1_555 A A 81 1_555 A G 198 1_555 4.531 5.850 0.783 -29.976 148.744 -113.676 -2.787 2.319 -1.929 -76.558 -15.428 -164.649 22 AA_C52A81:G198G196_AA A 52 ? A 196 ? A 81 ? A 198 ? 1 A A 58 1_555 A G 77 1_555 A G 59 1_555 A U 76 1_555 1.150 -0.918 3.612 -0.858 11.876 49.007 -1.989 -1.417 3.300 14.077 1.017 50.345 23 AA_A58G59:U76G77_AA A 58 ? A 77 ? A 59 ? A 76 ? 1 A G 59 1_555 A U 76 1_555 A C 60 1_555 A G 75 1_555 -0.093 -1.118 3.278 -2.765 6.274 38.945 -2.374 -0.181 3.068 9.322 4.109 39.521 24 AA_G59C60:G75U76_AA A 59 ? A 76 ? A 60 ? A 75 ? 1 A C 60 1_555 A G 75 1_555 A G 61 1_555 A C 74 1_555 -0.314 -1.482 3.579 -3.413 14.732 30.362 -4.929 -0.014 2.622 26.187 6.066 33.840 25 AA_C60G61:C74G75_AA A 60 ? A 75 ? A 61 ? A 74 ? 1 A G 61 1_555 A C 74 1_555 A G 62 1_555 A C 73 1_555 -0.121 -1.339 3.127 -0.302 11.243 31.767 -3.945 0.166 2.521 19.781 0.531 33.651 26 AA_G61G62:C73C74_AA A 61 ? A 74 ? A 62 ? A 73 ? 1 A G 62 1_555 A C 73 1_555 A G 63 1_555 A C 72 1_555 -0.160 -1.325 3.168 1.303 8.854 31.101 -3.811 0.499 2.691 16.099 -2.370 32.332 27 AA_G62G63:C72C73_AA A 62 ? A 73 ? A 63 ? A 72 ? 1 A G 63 1_555 A C 72 1_555 A G 64 1_555 A U 71 1_555 -0.488 -1.222 3.199 -1.924 7.213 31.793 -3.355 0.554 2.884 12.945 3.453 32.635 28 AA_G63G64:U71C72_AA A 63 ? A 72 ? A 64 ? A 71 ? 1 A G 64 1_555 A U 71 1_555 A C 65 1_555 A G 69 1_555 1.985 -1.382 4.087 -14.824 5.066 40.134 -2.453 -4.366 3.017 7.065 20.673 42.966 29 AA_G64C65:G69U71_AA A 64 ? A 71 ? A 65 ? A 69 ? 1 A G 30 1_555 A C 42 1_555 A C 31 1_555 A G 41 1_555 -0.360 -1.399 3.194 0.779 4.927 29.299 -3.701 0.855 2.914 9.653 -1.527 29.711 30 AA_G30C31:G41C42_AA A 30 ? A 42 ? A 31 ? A 41 ? 1 A C 31 1_555 A G 41 1_555 A C 32 1_555 A G 40 1_555 0.963 -1.511 3.525 1.575 11.593 30.812 -4.658 -1.430 2.831 20.897 -2.839 32.908 31 AA_C31C32:G40G41_AA A 31 ? A 41 ? A 32 ? A 40 ? 1 A C 32 1_555 A G 40 1_555 A U 85 1_555 A A 39 1_555 -2.074 -1.003 3.518 -0.810 14.593 47.181 -2.339 2.425 3.130 17.740 0.985 49.269 32 AA_C32U85:A39G40_AA A 32 ? A 40 ? A 85 ? A 39 ? 1 A U 85 1_555 A A 39 1_555 A G 86 1_555 A C 38 1_555 -1.120 -1.519 3.482 -2.025 11.144 26.355 -5.558 1.812 2.706 23.131 4.202 28.646 33 AA_U85G86:C38A39_AA A 85 ? A 39 ? A 86 ? A 38 ? 1 A G 86 1_555 A C 38 1_555 A C 87 1_555 A G 37 1_555 -0.028 -1.340 3.347 0.868 14.951 35.123 -3.849 0.147 2.585 23.500 -1.364 38.089 34 AA_G86C87:G37C38_AA A 86 ? A 38 ? A 87 ? A 37 ? 1 A C 87 1_555 A G 37 1_555 A G 88 1_555 A C 36 1_555 0.376 -1.376 3.363 -1.194 12.143 29.836 -4.540 -0.880 2.603 22.439 2.206 32.182 35 AA_C87G88:C36G37_AA A 87 ? A 37 ? A 88 ? A 36 ? 1 A G 88 1_555 A C 36 1_555 A G 89 1_555 A U 35 1_555 -0.800 -1.545 3.311 0.593 11.640 31.787 -4.408 1.465 2.587 20.414 -1.039 33.804 36 AA_G88G89:U35C36_AA A 88 ? A 36 ? A 89 ? A 35 ? 1 A G 89 1_555 A U 35 1_555 A C 90 1_555 A G 34 1_555 -0.478 -1.193 3.285 0.713 8.331 40.302 -2.573 0.755 2.983 11.936 -1.022 41.125 37 AA_G89C90:G34U35_AA A 89 ? A 35 ? A 90 ? A 34 ? 1 A C 90 1_555 A G 34 1_555 A U 92 1_555 A A 78 1_555 -2.707 -5.144 4.582 14.162 16.581 63.301 -5.444 3.114 2.717 15.327 -13.092 66.581 38 AA_C90U92:A78G34_AA A 90 ? A 34 ? A 92 ? A 78 ? 1 A A 95 1_555 A G 192 1_555 A U 96 1_555 A A 191 1_555 0.288 -1.299 4.028 -1.392 8.780 60.624 -1.778 -0.363 3.819 8.647 1.371 61.211 39 AA_A95U96:A191G192_AA A 95 ? A 192 ? A 96 ? A 191 ? 1 A G 133 1_555 A C 112 1_555 A U 134 1_555 A G 111 1_555 0.623 -1.303 3.105 1.811 4.600 34.535 -2.822 -0.784 2.940 7.699 -3.031 34.876 40 AA_G133U134:G111C112_AA A 133 ? A 112 ? A 134 ? A 111 ? 1 A U 134 1_555 A G 111 1_555 A G 135 1_555 A U 110 1_555 -0.722 -1.884 3.066 1.751 12.034 18.174 -8.540 2.425 1.469 33.645 -4.897 21.839 41 AA_U134G135:U110G111_AA A 134 ? A 111 ? A 135 ? A 110 ? 1 A G 135 1_555 A U 110 1_555 A C 136 1_555 A G 109 1_555 0.244 -1.031 3.185 0.014 8.352 42.070 -2.198 -0.332 2.938 11.498 -0.019 42.855 42 AA_G135C136:G109U110_AA A 135 ? A 110 ? A 136 ? A 109 ? 1 A C 136 1_555 A G 109 1_555 A G 137 1_555 A C 108 1_555 0.647 -1.473 3.838 1.982 4.595 27.517 -4.298 -0.801 3.586 9.561 -4.123 27.960 43 AA_C136G137:C108G109_AA A 136 ? A 109 ? A 137 ? A 108 ? 1 A G 137 1_555 A C 108 1_555 A C 185 1_555 A G 106 1_555 -1.330 -2.581 6.089 -0.364 17.499 67.399 -3.401 1.145 5.369 15.503 0.323 69.374 44 AA_G137C185:G106C108_AA A 137 ? A 108 ? A 185 ? A 106 ? 1 A C 185 1_555 A G 106 1_555 A A 186 1_555 A U 105 1_555 0.137 -1.225 3.336 0.507 15.886 34.511 -3.812 -0.149 2.552 25.189 -0.804 37.894 45 AA_C185A186:U105G106_AA A 185 ? A 106 ? A 186 ? A 105 ? 1 A A 186 1_555 A U 105 1_555 A G 187 1_555 A C 104 1_555 0.248 -1.392 3.329 -0.106 9.015 31.428 -3.976 -0.459 2.831 16.228 0.190 32.665 46 AA_A186G187:C104U105_AA A 186 ? A 105 ? A 187 ? A 104 ? 1 A G 187 1_555 A C 104 1_555 A G 188 1_555 A C 103 1_555 1.181 -2.432 3.948 9.132 7.884 21.759 -8.401 0.437 3.131 19.111 -22.136 24.844 47 AA_G187G188:C103C104_AA A 187 ? A 104 ? A 188 ? A 103 ? 1 A G 188 1_555 A C 103 1_555 A C 189 1_555 A G 101 1_555 -1.762 -1.124 3.314 3.901 2.972 25.394 -3.299 4.972 2.868 6.681 -8.770 25.855 48 AA_G188C189:G101C103_AA A 188 ? A 103 ? A 189 ? A 101 ? 1 A C 189 1_555 A G 101 1_555 A G 190 1_555 A A 140 1_555 -0.365 -1.530 3.701 -0.012 22.858 60.612 -2.475 0.342 3.014 21.832 0.012 64.393 49 AA_C189G190:A140G101_AA A 189 ? A 101 ? A 190 ? A 140 ? 1 A C 115 1_555 A G 130 1_555 A A 116 1_555 A U 129 1_555 -0.433 -1.284 3.393 -0.261 14.457 33.202 -4.036 0.663 2.630 23.938 0.432 36.132 50 AA_C115A116:U129G130_AA A 115 ? A 130 ? A 116 ? A 129 ? 1 A A 116 1_555 A U 129 1_555 A U 117 1_555 A A 128 1_555 0.218 -1.341 3.111 0.276 4.778 31.767 -3.213 -0.349 2.886 8.667 -0.500 32.117 51 AA_A116U117:A128U129_AA A 116 ? A 129 ? A 117 ? A 128 ? 1 A U 117 1_555 A A 128 1_555 A U 118 1_555 A A 127 1_555 0.235 -1.436 3.290 1.796 5.359 30.965 -3.621 -0.107 3.014 9.933 -3.329 31.465 52 AA_U117U118:A127A128_AA A 117 ? A 128 ? A 118 ? A 127 ? 1 A U 118 1_555 A A 127 1_555 A C 119 1_555 A G 126 1_555 -0.304 -1.422 3.286 3.701 3.795 31.535 -3.252 1.204 3.044 6.921 -6.750 31.966 53 AA_U118C119:G126A127_AA A 118 ? A 127 ? A 119 ? A 126 ? 1 A G 139 1_555 A C 182 1_555 A G 141 1_555 A C 181 1_555 1.450 -1.840 2.992 11.310 6.522 16.307 -7.749 0.619 2.553 19.430 -33.696 20.861 54 AA_G139G141:C181C182_AA A 139 ? A 182 ? A 141 ? A 181 ? 1 A G 141 1_555 A C 181 1_555 A U 142 1_555 A A 180 1_555 0.836 -1.387 3.512 -1.216 10.680 37.657 -3.375 -1.397 2.997 16.148 1.839 39.108 55 AA_G141U142:A180C181_AA A 141 ? A 181 ? A 142 ? A 180 ? 1 A U 142 1_555 A A 180 1_555 A G 143 1_555 A C 179 1_555 0.262 -1.340 3.599 -0.592 12.133 32.262 -4.213 -0.537 2.916 20.931 1.021 34.416 56 AA_U142G143:C179A180_AA A 142 ? A 180 ? A 143 ? A 179 ? 1 A G 143 1_555 A C 179 1_555 A G 144 1_555 A C 178 1_555 -0.621 -1.365 3.312 0.645 8.748 32.494 -3.729 1.175 2.847 15.289 -1.128 33.626 57 AA_G143G144:C178C179_AA A 143 ? A 179 ? A 144 ? A 178 ? 1 A G 144 1_555 A C 178 1_555 A C 145 1_555 A C 177 1_555 -1.058 -0.813 3.630 3.039 14.565 60.155 -1.523 1.183 3.322 14.295 -2.983 61.800 58 AA_G144C145:C177C178_AA A 144 ? A 178 ? A 145 ? A 177 ? 1 A C 145 1_555 A C 177 1_555 A U 148 1_555 A A 175 1_555 1.265 -2.156 6.827 -5.090 -16.318 32.727 1.520 -3.542 6.850 -26.804 8.361 36.814 59 AA_C145U148:A175C177_AA A 145 ? A 177 ? A 148 ? A 175 ? 1 A G 150 1_555 A C 173 1_555 A U 151 1_555 A G 172 1_555 -0.479 -1.291 3.187 1.253 5.685 38.479 -2.591 0.863 2.957 8.566 -1.888 38.900 60 AA_G150U151:G172C173_AA A 150 ? A 173 ? A 151 ? A 172 ? 1 A U 151 1_555 A G 172 1_555 A G 152 1_555 A A 171 1_555 -0.871 -1.143 3.490 2.154 10.517 58.209 -1.715 0.997 3.227 10.711 -2.193 59.105 61 AA_U151G152:A171G172_AA A 151 ? A 172 ? A 152 ? A 171 ? 1 A C 155 1_555 A C 167 1_555 A G 156 1_555 A U 166 1_555 2.371 -1.886 3.459 6.068 21.802 32.701 -5.236 -2.818 2.218 34.109 -9.493 39.591 62 AA_C155G156:U166C167_AA A 155 ? A 167 ? A 156 ? A 166 ? 1 A G 156 1_555 A U 166 1_555 A G 157 1_555 A C 165 1_555 -1.295 -1.190 4.229 -4.166 12.318 46.305 -2.696 1.174 3.905 15.313 5.179 48.000 63 AA_G156G157:C165U166_AA A 156 ? A 166 ? A 157 ? A 165 ? 1 A G 157 1_555 A C 165 1_555 A C 158 1_555 A G 164 1_555 0.342 -1.501 3.022 -1.311 -0.019 32.688 -2.662 -0.815 3.007 -0.034 2.328 32.713 64 AA_G157C158:G164C165_AA A 157 ? A 165 ? A 158 ? A 164 ? 1 A C 158 1_555 A G 164 1_555 A G 159 1_555 A A 163 1_555 -1.909 -1.702 3.424 4.601 4.121 42.854 -2.707 3.035 3.044 5.605 -6.258 43.276 65 AA_C158G159:A163G164_AA A 158 ? A 164 ? A 159 ? A 163 ? # _pdbx_audit_support.funding_organization 'Polish National Science Centre' _pdbx_audit_support.country Poland _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9G7C _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P # loop_ #