HEADER SIGNALING PROTEIN 29-JUL-24 9GAU TITLE SUMO-DARPIN-C10-COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DARPIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: UBIQUITIN-LIKE PROTEIN SMT3; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 8 ORGANISM_COMMON: BREWER'S YEAST; SOURCE 9 ORGANISM_TAXID: 4932; SOURCE 10 GENE: SMT3, YDR510W, D9719.15; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS SUMO, DARPIN, ANKYRIN REPEATS, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.WOLF,B.CAKILKAYA,A.BOERGEL REVDAT 2 12-MAR-25 9GAU 1 JRNL REVDAT 1 05-MAR-25 9GAU 0 JRNL AUTH V.TROSTER,R.P.WONG,A.BORGEL,B.CAKILKAYA,C.RENZ,M.M.MOCKEL, JRNL AUTH 2 K.EIFLER-OLIVI,J.MARINHO,T.REINBERG,S.FURLER,J.V.SCHAEFER, JRNL AUTH 3 A.PLUCKTHUN,E.WOLF,H.D.ULRICH JRNL TITL CUSTOM AFFINITY PROBES REVEAL DNA-DAMAGE-INDUCED, JRNL TITL 2 SSDNA-INDEPENDENT CHROMATIN SUMOYLATION IN BUDDING YEAST. JRNL REF CELL REP V. 44 15353 2025 JRNL REFN ESSN 2211-1247 JRNL PMID 40019834 JRNL DOI 10.1016/J.CELREP.2025.115353 REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 5531 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0500 - 4.1900 0.98 1276 142 0.2052 0.2362 REMARK 3 2 4.1900 - 3.3300 1.00 1270 142 0.2168 0.3165 REMARK 3 3 3.3300 - 2.9100 0.99 1241 137 0.2822 0.3040 REMARK 3 4 2.9100 - 2.6400 0.96 1190 133 0.3032 0.3720 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.398 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.165 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1527 REMARK 3 ANGLE : 0.589 2070 REMARK 3 CHIRALITY : 0.041 241 REMARK 3 PLANARITY : 0.004 275 REMARK 3 DIHEDRAL : 4.349 208 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.8225 -17.2695 7.2515 REMARK 3 T TENSOR REMARK 3 T11: 0.8536 T22: 0.4498 REMARK 3 T33: 0.4927 T12: 0.0086 REMARK 3 T13: 0.0696 T23: -0.0532 REMARK 3 L TENSOR REMARK 3 L11: 9.3375 L22: 4.4633 REMARK 3 L33: 4.7698 L12: 1.4033 REMARK 3 L13: -0.4797 L23: 4.4064 REMARK 3 S TENSOR REMARK 3 S11: 0.7352 S12: -0.8888 S13: -0.7539 REMARK 3 S21: 2.2652 S22: -0.8046 S23: 0.9321 REMARK 3 S31: 0.5600 S32: -0.3041 S33: 0.1534 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.9493 -17.6828 2.6110 REMARK 3 T TENSOR REMARK 3 T11: 0.6860 T22: 0.5758 REMARK 3 T33: 0.3135 T12: 0.0655 REMARK 3 T13: -0.0744 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 5.3831 L22: 6.7726 REMARK 3 L33: 2.7991 L12: 3.7721 REMARK 3 L13: 1.2953 L23: 2.3991 REMARK 3 S TENSOR REMARK 3 S11: -0.9132 S12: -0.1009 S13: -0.2639 REMARK 3 S21: -0.9784 S22: 0.4660 S23: -0.0334 REMARK 3 S31: -0.3149 S32: -0.5170 S33: 0.3025 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2669 -9.9251 5.4076 REMARK 3 T TENSOR REMARK 3 T11: 0.4046 T22: 0.3194 REMARK 3 T33: 0.4085 T12: 0.0780 REMARK 3 T13: -0.0117 T23: -0.0171 REMARK 3 L TENSOR REMARK 3 L11: 3.0396 L22: 5.2386 REMARK 3 L33: 5.3702 L12: -1.0242 REMARK 3 L13: -1.4442 L23: 0.2153 REMARK 3 S TENSOR REMARK 3 S11: 0.6524 S12: 0.5278 S13: 0.3791 REMARK 3 S21: -0.5143 S22: -0.0289 S23: -0.2786 REMARK 3 S31: -0.0257 S32: -0.0346 S33: -0.5634 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.7048 -6.3418 10.4528 REMARK 3 T TENSOR REMARK 3 T11: 0.5413 T22: 0.4585 REMARK 3 T33: 0.3820 T12: 0.0467 REMARK 3 T13: 0.0049 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 5.2703 L22: 2.4484 REMARK 3 L33: 4.3614 L12: 3.2961 REMARK 3 L13: 4.7506 L23: 3.1522 REMARK 3 S TENSOR REMARK 3 S11: 0.3595 S12: -1.5882 S13: 0.4639 REMARK 3 S21: 0.6455 S22: -0.2205 S23: 0.1946 REMARK 3 S31: 0.1229 S32: -0.9303 S33: -0.2471 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.7357 -6.9377 2.5122 REMARK 3 T TENSOR REMARK 3 T11: 0.4190 T22: 0.4867 REMARK 3 T33: 0.6306 T12: 0.0045 REMARK 3 T13: 0.0452 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 5.5891 L22: 7.9075 REMARK 3 L33: 3.4711 L12: 1.6207 REMARK 3 L13: 4.2425 L23: 1.5422 REMARK 3 S TENSOR REMARK 3 S11: 0.4638 S12: 0.8077 S13: 2.1943 REMARK 3 S21: -0.1113 S22: -0.2170 S23: 0.3207 REMARK 3 S31: -0.0112 S32: 0.6052 S33: -0.3850 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7117 -0.9381 5.7041 REMARK 3 T TENSOR REMARK 3 T11: 0.5586 T22: 0.5504 REMARK 3 T33: 0.2832 T12: 0.1494 REMARK 3 T13: 0.0234 T23: 0.0918 REMARK 3 L TENSOR REMARK 3 L11: 6.4810 L22: 4.8889 REMARK 3 L33: 6.3226 L12: -3.7646 REMARK 3 L13: -6.0898 L23: 4.7974 REMARK 3 S TENSOR REMARK 3 S11: 0.5960 S12: 1.1585 S13: 0.7086 REMARK 3 S21: -0.0180 S22: -0.5103 S23: -0.0912 REMARK 3 S31: -0.2616 S32: -0.3050 S33: 0.0004 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5341 2.2956 12.8632 REMARK 3 T TENSOR REMARK 3 T11: 0.5450 T22: 0.5990 REMARK 3 T33: 0.7399 T12: 0.1670 REMARK 3 T13: -0.0785 T23: -0.0831 REMARK 3 L TENSOR REMARK 3 L11: 4.9839 L22: 7.6495 REMARK 3 L33: 5.5859 L12: -4.1397 REMARK 3 L13: -4.9317 L23: 3.2972 REMARK 3 S TENSOR REMARK 3 S11: -1.1360 S12: -1.4211 S13: 1.0100 REMARK 3 S21: 0.4104 S22: 0.6033 S23: -1.8265 REMARK 3 S31: -0.3701 S32: 1.5220 S33: 0.2378 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.3593 3.2928 4.8746 REMARK 3 T TENSOR REMARK 3 T11: 0.5075 T22: 0.4369 REMARK 3 T33: 0.5565 T12: -0.0395 REMARK 3 T13: -0.0447 T23: 0.0371 REMARK 3 L TENSOR REMARK 3 L11: 6.2113 L22: 2.8465 REMARK 3 L33: 8.3149 L12: 1.3484 REMARK 3 L13: -1.5639 L23: -0.6365 REMARK 3 S TENSOR REMARK 3 S11: 0.7731 S12: -0.1946 S13: 0.9115 REMARK 3 S21: 0.7110 S22: 0.0505 S23: -0.4746 REMARK 3 S31: -0.6961 S32: 1.2420 S33: -0.5043 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.3850 8.7026 9.8864 REMARK 3 T TENSOR REMARK 3 T11: 0.5382 T22: 0.3861 REMARK 3 T33: 0.4695 T12: 0.0011 REMARK 3 T13: -0.0504 T23: 0.0364 REMARK 3 L TENSOR REMARK 3 L11: 9.4798 L22: 4.3545 REMARK 3 L33: 3.4258 L12: -4.8223 REMARK 3 L13: -5.2122 L23: 3.2423 REMARK 3 S TENSOR REMARK 3 S11: 0.7139 S12: -0.0520 S13: 2.6171 REMARK 3 S21: -0.3882 S22: 0.1424 S23: -1.0327 REMARK 3 S31: -0.6135 S32: 0.9125 S33: 0.1122 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.8789 11.2245 11.7708 REMARK 3 T TENSOR REMARK 3 T11: 0.6873 T22: 0.4940 REMARK 3 T33: 1.5114 T12: -0.0895 REMARK 3 T13: 0.1009 T23: -0.2471 REMARK 3 L TENSOR REMARK 3 L11: 7.2719 L22: 7.9827 REMARK 3 L33: 3.4910 L12: -3.3914 REMARK 3 L13: -4.6616 L23: 0.3882 REMARK 3 S TENSOR REMARK 3 S11: -0.1284 S12: -1.0010 S13: 2.2838 REMARK 3 S21: 0.5197 S22: 0.6759 S23: -1.8549 REMARK 3 S31: -1.7146 S32: 1.4933 S33: -0.3111 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 21 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1328 2.9714 18.9176 REMARK 3 T TENSOR REMARK 3 T11: 0.6005 T22: 0.3914 REMARK 3 T33: 0.4017 T12: 0.1094 REMARK 3 T13: -0.1132 T23: -0.1193 REMARK 3 L TENSOR REMARK 3 L11: 4.5504 L22: 6.0561 REMARK 3 L33: 0.5905 L12: -2.1123 REMARK 3 L13: -0.5926 L23: -1.2686 REMARK 3 S TENSOR REMARK 3 S11: -0.4009 S12: 0.0170 S13: 0.5721 REMARK 3 S21: 0.5474 S22: 0.2709 S23: -1.0392 REMARK 3 S31: -0.0539 S32: 0.1516 S33: 0.1518 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 46 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0522 10.3571 13.2022 REMARK 3 T TENSOR REMARK 3 T11: 0.6462 T22: 0.5541 REMARK 3 T33: 0.3753 T12: -0.0329 REMARK 3 T13: 0.0616 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 6.8521 L22: 2.6617 REMARK 3 L33: 8.7106 L12: -3.8748 REMARK 3 L13: 0.0793 L23: -1.8996 REMARK 3 S TENSOR REMARK 3 S11: -0.0429 S12: 1.0488 S13: 0.7031 REMARK 3 S21: -0.1929 S22: -0.5532 S23: -0.3320 REMARK 3 S31: -0.9221 S32: -0.5605 S33: 0.3326 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8493 11.1386 16.5410 REMARK 3 T TENSOR REMARK 3 T11: 0.5943 T22: 0.5640 REMARK 3 T33: 0.1834 T12: -0.0053 REMARK 3 T13: -0.0451 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 7.9711 L22: 8.1585 REMARK 3 L33: 0.1060 L12: -2.5027 REMARK 3 L13: 0.9045 L23: -0.3974 REMARK 3 S TENSOR REMARK 3 S11: -0.1785 S12: 0.8531 S13: 0.8931 REMARK 3 S21: -0.1112 S22: 0.6394 S23: -0.6699 REMARK 3 S31: -0.8121 S32: -0.7274 S33: -0.1868 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1679 8.0179 27.7991 REMARK 3 T TENSOR REMARK 3 T11: 1.2317 T22: 0.4995 REMARK 3 T33: 0.3072 T12: 0.1710 REMARK 3 T13: -0.0135 T23: -0.0446 REMARK 3 L TENSOR REMARK 3 L11: 9.5612 L22: 5.9177 REMARK 3 L33: 2.0992 L12: 3.2203 REMARK 3 L13: 2.9131 L23: -1.4308 REMARK 3 S TENSOR REMARK 3 S11: -1.0272 S12: -0.6530 S13: 0.7574 REMARK 3 S21: 1.8101 S22: 0.5714 S23: 0.3742 REMARK 3 S31: 0.9700 S32: 0.3118 S33: 0.2929 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 82 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0603 2.5435 22.0893 REMARK 3 T TENSOR REMARK 3 T11: 0.8183 T22: 0.5972 REMARK 3 T33: 0.2241 T12: 0.0428 REMARK 3 T13: -0.1549 T23: 0.0642 REMARK 3 L TENSOR REMARK 3 L11: 3.5359 L22: 5.3043 REMARK 3 L33: 7.2353 L12: -1.1386 REMARK 3 L13: 2.2695 L23: -1.3114 REMARK 3 S TENSOR REMARK 3 S11: -0.3511 S12: -0.3955 S13: -0.0596 REMARK 3 S21: 0.6014 S22: 0.5201 S23: 0.3490 REMARK 3 S31: 0.9147 S32: -0.6148 S33: -0.2622 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9GAU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUL-24. REMARK 100 THE DEPOSITION ID IS D_1292139679. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5539 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 47.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.29300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 1.61400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS. 16% (V/V)PEG 3350, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.23050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.34350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.23050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.34350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 18 CD CE NZ REMARK 470 ASP A 30 CG OD1 OD2 REMARK 470 ASN A 93 CG OD1 ND2 REMARK 470 HIS A 95 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 97 CG CD OE1 OE2 REMARK 470 PHE A 120 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 129 CG CD OE1 OE2 REMARK 470 SER B 32 OG REMARK 470 GLU B 34 CG CD OE1 OE2 REMARK 470 ASP B 68 CG OD1 OD2 REMARK 470 GLN B 73 CG CD OE1 NE2 REMARK 470 GLU B 84 CG CD OE1 OE2 REMARK 470 ARG B 93 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 92 -105.11 59.37 REMARK 500 HIS A 95 66.82 60.80 REMARK 500 ASP A 113 -166.76 -79.59 REMARK 500 GLU A 129 -74.68 52.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 222 DISTANCE = 6.56 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9G8I RELATED DB: PDB REMARK 900 SUMO-DARPIN-A10 COMPLEX DBREF 9GAU A 14 136 PDB 9GAU 9GAU 14 136 DBREF 9GAU B 21 96 UNP Q12306 SMT3_YEAST 21 96 SEQRES 1 A 123 SER ASP LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA SEQRES 2 A 123 GLY GLN ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY SEQRES 3 A 123 ALA ASP VAL ASN ALA GLN ASP THR GLN GLY ARG THR PRO SEQRES 4 A 123 LEU HIS LEU ALA ALA GLN ARG GLY HIS LEU GLU ILE VAL SEQRES 5 A 123 GLU VAL LEU LEU LYS ALA GLY ALA ASP VAL ASN ALA HIS SEQRES 6 A 123 ASP GLN TYR GLY TRP THR PRO LEU HIS LEU ALA ALA HIS SEQRES 7 A 123 ALA ASN GLY HIS LEU GLU ILE VAL GLU VAL LEU LEU LYS SEQRES 8 A 123 HIS GLY ALA ASP VAL ASN ALA GLN ASP TRP ILE GLY VAL SEQRES 9 A 123 THR PRO PHE ASP LEU ALA VAL ASP ASP GLY ASN GLU ASP SEQRES 10 A 123 ILE ALA GLU VAL LEU GLN SEQRES 1 B 76 GLU THR HIS ILE ASN LEU LYS VAL SER ASP GLY SER SER SEQRES 2 B 76 GLU ILE PHE PHE LYS ILE LYS LYS THR THR PRO LEU ARG SEQRES 3 B 76 ARG LEU MET GLU ALA PHE ALA LYS ARG GLN GLY LYS GLU SEQRES 4 B 76 MET ASP SER LEU ARG PHE LEU TYR ASP GLY ILE ARG ILE SEQRES 5 B 76 GLN ALA ASP GLN THR PRO GLU ASP LEU ASP MET GLU ASP SEQRES 6 B 76 ASN ASP ILE ILE GLU ALA HIS ARG GLU GLN ILE FORMUL 3 HOH *31(H2 O) HELIX 1 AA1 ASP A 15 GLY A 27 1 13 HELIX 2 AA2 GLN A 28 ASN A 38 1 11 HELIX 3 AA3 THR A 51 ARG A 59 1 9 HELIX 4 AA4 HIS A 61 ALA A 71 1 11 HELIX 5 AA5 THR A 84 HIS A 91 1 8 HELIX 6 AA6 HIS A 95 HIS A 105 1 11 HELIX 7 AA7 THR A 118 GLY A 127 1 10 HELIX 8 AA8 GLU A 129 GLN A 136 1 8 HELIX 9 AA9 LEU B 45 GLN B 56 1 12 HELIX 10 AB1 GLU B 59 ASP B 61 5 3 HELIX 11 AB2 THR B 77 ASP B 82 5 6 SHEET 1 AA1 5 GLU B 34 LYS B 40 0 SHEET 2 AA1 5 HIS B 23 SER B 29 -1 N ILE B 24 O ILE B 39 SHEET 3 AA1 5 ASP B 87 ARG B 93 1 O ILE B 89 N LYS B 27 SHEET 4 AA1 5 LEU B 63 TYR B 67 -1 N LEU B 66 O GLU B 90 SHEET 5 AA1 5 ILE B 70 ARG B 71 -1 O ILE B 70 N TYR B 67 CRYST1 90.461 44.687 47.602 90.00 98.76 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011054 0.000000 0.001703 0.00000 SCALE2 0.000000 0.022378 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021255 0.00000