HEADER DNA BINDING PROTEIN 08-AUG-24 9GEF TITLE EXPERIMENTAL LOCALIZATION OF METAL-BINDING SITES REVEALS THE ROLE OF TITLE 2 METAL IONS IN THE DELAFLOXACIN-STABILIZED STREPTOCOCCUS PNEUMONIAE TITLE 3 TOPOISOMERASE IV DNA CLEAVAGE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA TOPOISOMERASE (ATP-HYDROLYZING),DNA TOPOISOMERASE 4; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.6.2.2; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE FUSED TOPOISOMERASE IV CLEAVAGE COMPLEX COMPRISES COMPND 7 THE C-TERMINAL DOMAIN OF THE PARE30 DOMAIN (RESIDUES 415-647), A HIS COMPND 8 INSERT AT POSITION 648 AND THE N-TERMINAL DOMAIN OF PARC55 (RESIDUES COMPND 9 1001-1486),; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA (5'-D(*TP*GP*TP*GP*GP*AP*T)-3'); COMPND 12 CHAIN: E; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: PART OF THE V-SITE 18MER DS DNA OLIGOMER FROM THE COMPND 15 PLASMID PBR322; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: DNA (5'-D(P*GP*GP*TP*TP*AP*TP*CP*CP*AP*CP*A)-3'); COMPND 18 CHAIN: F; COMPND 19 ENGINEERED: YES; COMPND 20 OTHER_DETAILS: PART OF THE V-SITE 18MER DS DNA OLIGOMER FROM THE COMPND 21 PLASMID PBR322; COMPND 22 MOL_ID: 4; COMPND 23 MOLECULE: DNA (5'-D(*GP*TP*AP*AP*TP*AP*C)-3'); COMPND 24 CHAIN: G; COMPND 25 ENGINEERED: YES; COMPND 26 OTHER_DETAILS: PART OF THE V-SITE 18MER DS DNA OLIGOMER FROM THE COMPND 27 PLASMID PBR322; COMPND 28 MOL_ID: 5; COMPND 29 MOLECULE: DNA (5'-D(P*AP*AP*CP*CP*GP*TP*AP*TP*TP*AP*C)-3'); COMPND 30 CHAIN: H; COMPND 31 ENGINEERED: YES; COMPND 32 OTHER_DETAILS: PART OF THE V-SITE 18MER DS DNA OLIGOMER FROM THE COMPND 33 PLASMID PBR322 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 STRAIN: 7785; SOURCE 5 GENE: AMCSP13_000989, PARC, SP_0855; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET29A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 13 ORGANISM_TAXID: 562; SOURCE 14 OTHER_DETAILS: PLAMID PBR322; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 18 ORGANISM_TAXID: 562; SOURCE 19 OTHER_DETAILS: PLASMID PBR322; SOURCE 20 MOL_ID: 4; SOURCE 21 SYNTHETIC: YES; SOURCE 22 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 23 ORGANISM_TAXID: 562; SOURCE 24 OTHER_DETAILS: PLAMID PBR322; SOURCE 25 MOL_ID: 5; SOURCE 26 SYNTHETIC: YES; SOURCE 27 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 28 ORGANISM_TAXID: 562; SOURCE 29 OTHER_DETAILS: PLAMID PBR322 KEYWDS METAL IONS; TYPE II TOPOISOMERASES; FLUOROQUINOLONES; LONG-WAVELENGTH KEYWDS 2 X-RAY CRYSTALLOGRAPHY, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.WANG,S.NAJMUDIN,X.-S.PAN,V.MYKHAYLYK,C.ORR,A.WAGNER,L.GOVADA, AUTHOR 2 N.E.CHAYEN,L.M.FISHER,M.R.SANDERSON REVDAT 2 11-FEB-26 9GEF 1 REMARK REVDAT 1 16-OCT-24 9GEF 0 JRNL AUTH B.WANG,S.NAJMUDIN,X.S.PAN,V.MYKHAYLYK,C.ORR,A.WAGNER, JRNL AUTH 2 L.GOVADA,N.E.CHAYEN,L.M.FISHER,M.R.SANDERSON JRNL TITL EXPERIMENTAL LOCALIZATION OF METAL-BINDING SITES REVEALS THE JRNL TITL 2 ROLE OF METAL IONS IN TYPE II DNA TOPOISOMERASES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 121 57121 2024 JRNL REFN ESSN 1091-6490 JRNL PMID 39361644 JRNL DOI 10.1073/PNAS.2413357121 REMARK 2 REMARK 2 RESOLUTION. 2.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 4.4.7 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 69.5 REMARK 3 NUMBER OF REFLECTIONS : 62910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1109 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.6900 - 2.6220 0.05 359 3 0.3480 0.1170 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.27000 REMARK 3 B22 (A**2) : -1.27000 REMARK 3 B33 (A**2) : 4.11000 REMARK 3 B12 (A**2) : -0.63000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -48.2150 60.8820 -36.3120 REMARK 3 T TENSOR REMARK 3 T11: 0.2874 T22: 0.3283 REMARK 3 T33: 0.0463 T12: 0.0258 REMARK 3 T13: 0.0029 T23: -0.0382 REMARK 3 L TENSOR REMARK 3 L11: 1.0985 L22: 0.5334 REMARK 3 L33: 0.5746 L12: 0.5423 REMARK 3 L13: 0.0182 L23: 0.0358 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: 0.0303 S13: -0.1627 REMARK 3 S21: 0.0262 S22: 0.0336 S23: -0.1513 REMARK 3 S31: 0.0585 S32: 0.3033 S33: -0.0431 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -54.5130 67.7310 -0.0330 REMARK 3 T TENSOR REMARK 3 T11: 0.3238 T22: 0.2634 REMARK 3 T33: 0.0621 T12: 0.0095 REMARK 3 T13: 0.0402 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 1.1563 L22: 0.5351 REMARK 3 L33: 0.4331 L12: 0.4891 REMARK 3 L13: 0.0900 L23: 0.1002 REMARK 3 S TENSOR REMARK 3 S11: 0.0590 S12: -0.0450 S13: 0.2486 REMARK 3 S21: 0.0172 S22: -0.0261 S23: 0.0751 REMARK 3 S31: -0.2901 S32: 0.0126 S33: -0.0329 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -38.0240 70.3360 -35.6050 REMARK 3 T TENSOR REMARK 3 T11: 0.3223 T22: 0.4751 REMARK 3 T33: 0.3083 T12: -0.1298 REMARK 3 T13: -0.0175 T23: -0.1002 REMARK 3 L TENSOR REMARK 3 L11: 7.7024 L22: 11.3153 REMARK 3 L33: 0.1944 L12: -7.1735 REMARK 3 L13: -0.4653 L23: 1.2915 REMARK 3 S TENSOR REMARK 3 S11: 0.0097 S12: -0.4128 S13: 1.1660 REMARK 3 S21: 0.0281 S22: -0.0860 S23: -0.3181 REMARK 3 S31: -0.0150 S32: -0.0075 S33: 0.0763 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -33.7790 72.1050 -32.2360 REMARK 3 T TENSOR REMARK 3 T11: 0.7673 T22: 0.5603 REMARK 3 T33: 0.3603 T12: -0.1487 REMARK 3 T13: 0.2977 T23: -0.0196 REMARK 3 L TENSOR REMARK 3 L11: 5.3238 L22: 0.1793 REMARK 3 L33: 0.4765 L12: 0.2692 REMARK 3 L13: -1.1968 L23: 0.1246 REMARK 3 S TENSOR REMARK 3 S11: 0.2441 S12: 0.1404 S13: 1.2321 REMARK 3 S21: -0.3200 S22: 0.1618 S23: -0.0434 REMARK 3 S31: -0.4227 S32: 0.1712 S33: -0.4059 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -41.4000 72.8950 0.6980 REMARK 3 T TENSOR REMARK 3 T11: 0.2330 T22: 0.5905 REMARK 3 T33: 0.3550 T12: -0.0371 REMARK 3 T13: -0.0296 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 2.6509 L22: 11.0461 REMARK 3 L33: 0.5945 L12: -2.3032 REMARK 3 L13: -0.3226 L23: 2.4765 REMARK 3 S TENSOR REMARK 3 S11: 0.0235 S12: 0.4074 S13: -0.4275 REMARK 3 S21: 0.1339 S22: 0.2653 S23: -1.1405 REMARK 3 S31: 0.0230 S32: 0.2041 S33: -0.2888 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -37.9860 76.1400 -2.4710 REMARK 3 T TENSOR REMARK 3 T11: 0.5935 T22: 0.5161 REMARK 3 T33: 0.4840 T12: 0.1212 REMARK 3 T13: -0.0323 T23: -0.2234 REMARK 3 L TENSOR REMARK 3 L11: 4.0491 L22: 2.8727 REMARK 3 L33: 1.2783 L12: 1.4821 REMARK 3 L13: -0.7650 L23: 1.3444 REMARK 3 S TENSOR REMARK 3 S11: 0.2033 S12: -0.3427 S13: -0.0936 REMARK 3 S21: 0.1565 S22: 0.5060 S23: -1.0841 REMARK 3 S31: 0.0273 S32: 0.5242 S33: -0.7092 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 3 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 9GEF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1292140833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 - 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I23 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 2.75,3.14,3.54,4.35,4.50,5.16 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 12M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XIA2.MULTIPLEX, STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 124385 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.370 REMARK 200 RESOLUTION RANGE LOW (A) : 210.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 59.40 REMARK 200 R MERGE (I) : 0.21500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 45.00 REMARK 200 R MERGE FOR SHELL (I) : 5.36900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: DIMPLE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: ROD-SHAPED REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM SODIUM CACODYLATE, 62.5 MM KCL, REMARK 280 7.5 MM MGCL 2 , 2.5% TACSIMATE TM HAMPTON RESEARCH, 5.5-7% REMARK 280 ISOPROPANOL, PH 6.5. THE PROTEIN CRYSTALS WERE CRYOPROTECTED REMARK 280 WITH 50 MM SODIUM CACODYLATE PH 6.5, 62.5 MM KCL, 7.5 MM MGCL 2 , REMARK 280 2.5% TACSIMATE TM HAMPTON RESEARCH, 1 MM BETA-MERCAPTOETHANOL REMARK 280 AND 30% V/V MPD BEFORE BEING FLASH-COOLED IN LIQUID NITROGEN AND REMARK 280 COLLECTED IN ELLIPTICAL POLYIMIDE SAMPLE MOUNTS., PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.27333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 140.54667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 140.54667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.27333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -171.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 MG MG H 102 O HOH H 201 1.37 REMARK 500 OH TYR A 1118 P DG F 1 1.61 REMARK 500 OH TYR B 1118 P DA H 1 1.61 REMARK 500 O1 TE9 H 101 O HOH H 201 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 1393 O ASN B 1279 4455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA F 5 P - O5' - C5' ANGL. DEV. = -10.8 DEGREES REMARK 500 DA F 9 O3' - P - OP2 ANGL. DEV. = 7.1 DEGREES REMARK 500 DG G 9 C3' - O3' - P ANGL. DEV. = 7.5 DEGREES REMARK 500 DT G 10 O5' - P - OP2 ANGL. DEV. = -7.9 DEGREES REMARK 500 DG H 5 O4' - C4' - C3' ANGL. DEV. = -2.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 423 89.76 -160.75 REMARK 500 GLU A 433 99.34 -68.00 REMARK 500 ALA A 468 -69.84 141.63 REMARK 500 MET A 526 47.77 -148.71 REMARK 500 LEU A 539 75.22 60.42 REMARK 500 SER A 546 116.19 65.95 REMARK 500 LYS A 551 65.03 -100.37 REMARK 500 LYS A 552 -88.10 50.71 REMARK 500 GLU A 553 55.03 4.09 REMARK 500 VAL A 555 86.04 3.35 REMARK 500 PHE A 571 170.28 -51.55 REMARK 500 LYS A 573 63.91 9.09 REMARK 500 ALA A 644 129.82 81.92 REMARK 500 PHE A 647 93.96 -51.08 REMARK 500 ASN A1003 -166.51 93.37 REMARK 500 ARG A1028 -71.11 -157.34 REMARK 500 LYS A1061 127.91 -39.66 REMARK 500 ALA A1157 70.21 64.93 REMARK 500 SER A1167 131.86 -170.85 REMARK 500 SER A1171 -150.26 -104.78 REMARK 500 ALA A1217 -169.99 84.93 REMARK 500 LYS A1248 -81.34 -33.58 REMARK 500 ARG A1297 102.96 -160.60 REMARK 500 ASP A1305 74.39 37.53 REMARK 500 PHE A1335 -12.46 68.37 REMARK 500 ASN B 423 89.28 -160.60 REMARK 500 MET B 467 -57.61 148.18 REMARK 500 ASP B 469 -46.12 86.39 REMARK 500 ALA B 489 -71.94 -52.73 REMARK 500 MET B 526 46.78 -148.81 REMARK 500 LYS B 547 -84.01 -84.28 REMARK 500 LYS B 552 59.41 -105.79 REMARK 500 GLU B 554 134.39 56.24 REMARK 500 LYS B 569 -72.57 -82.12 REMARK 500 GLN B 570 -52.55 -12.14 REMARK 500 ALA B 644 127.57 82.32 REMARK 500 PHE B 647 98.87 -66.73 REMARK 500 ASN B1003 -162.33 92.68 REMARK 500 ARG B1028 -69.42 -157.76 REMARK 500 LYS B1061 128.04 -39.95 REMARK 500 ALA B1157 70.46 64.34 REMARK 500 SER B1167 132.41 -172.81 REMARK 500 SER B1171 -149.58 -105.64 REMARK 500 ALA B1217 -169.89 85.35 REMARK 500 ARG B1297 100.48 -160.46 REMARK 500 ASP B1305 78.82 30.46 REMARK 500 PHE B1335 -14.02 69.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 465 LYS B 466 -147.60 REMARK 500 MET B 467 ALA B 468 145.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 447 0.09 SIDE CHAIN REMARK 500 ARG A 579 0.09 SIDE CHAIN REMARK 500 ARG A 605 0.12 SIDE CHAIN REMARK 500 ARG A 613 0.11 SIDE CHAIN REMARK 500 ARG A1060 0.10 SIDE CHAIN REMARK 500 ARG A1222 0.15 SIDE CHAIN REMARK 500 ARG A1235 0.16 SIDE CHAIN REMARK 500 ARG A1239 0.15 SIDE CHAIN REMARK 500 ARG A1276 0.14 SIDE CHAIN REMARK 500 ARG A1354 0.08 SIDE CHAIN REMARK 500 ARG A1360 0.08 SIDE CHAIN REMARK 500 ARG A1393 0.08 SIDE CHAIN REMARK 500 ARG A1426 0.09 SIDE CHAIN REMARK 500 ARG B 445 0.08 SIDE CHAIN REMARK 500 ARG B 613 0.10 SIDE CHAIN REMARK 500 ARG B1019 0.09 SIDE CHAIN REMARK 500 ARG B1034 0.08 SIDE CHAIN REMARK 500 ARG B1060 0.12 SIDE CHAIN REMARK 500 ARG B1222 0.12 SIDE CHAIN REMARK 500 ARG B1235 0.15 SIDE CHAIN REMARK 500 ARG B1239 0.15 SIDE CHAIN REMARK 500 ARG B1276 0.12 SIDE CHAIN REMARK 500 ARG B1297 0.08 SIDE CHAIN REMARK 500 ARG B1362 0.10 SIDE CHAIN REMARK 500 ARG B1393 0.11 SIDE CHAIN REMARK 500 ARG B1426 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 506 OD2 REMARK 620 2 ASP A 508 OD2 94.8 REMARK 620 3 HOH A1603 O 92.3 96.0 REMARK 620 4 HOH A1616 O 87.5 176.7 86.3 REMARK 620 5 HOH A1617 O 93.4 83.5 174.3 93.9 REMARK 620 6 HOH E 101 O 179.7 85.3 87.4 92.4 86.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B1504 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 587 OD1 REMARK 620 2 MET B1101 O 69.6 REMARK 620 3 GLY B1103 O 83.2 97.5 REMARK 620 4 ASN B1105 OD1 171.6 103.4 93.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1504 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A1101 O REMARK 620 2 GLY A1103 O 110.2 REMARK 620 3 ASN A1105 OD1 112.4 86.2 REMARK 620 4 HOH A1630 O 175.7 66.1 70.3 REMARK 620 5 ASN B 587 OD1 78.6 89.0 168.9 98.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1506 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A1316 O REMARK 620 2 LYS A1317 O 78.1 REMARK 620 3 THR A1319 O 78.3 100.0 REMARK 620 4 GLN A1322 O 85.6 163.5 78.4 REMARK 620 5 HOH A1613 O 130.6 84.6 59.6 108.0 REMARK 620 6 HOH A1642 O 105.5 79.2 175.8 103.5 116.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1643 O REMARK 620 2 TE9 F 101 O2 110.4 REMARK 620 3 TE9 F 101 O3 164.6 72.3 REMARK 620 4 HOH F 202 O 85.6 62.4 82.4 REMARK 620 5 HOH F 203 O 93.9 136.4 75.5 85.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B1506 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 495 O REMARK 620 2 ASN B 497 OD1 82.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 506 OD2 REMARK 620 2 ASP B 508 OD2 92.8 REMARK 620 3 HOH B1609 O 93.3 96.5 REMARK 620 4 HOH B1614 O 91.2 83.0 175.5 REMARK 620 5 HOH B1630 O 93.7 173.3 82.0 97.9 REMARK 620 6 HOH G 101 O 174.3 92.5 84.2 91.4 80.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B1508 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B1316 O REMARK 620 2 LYS B1317 O 77.5 REMARK 620 3 THR B1319 O 80.4 104.6 REMARK 620 4 GLN B1322 O 91.9 168.6 77.2 REMARK 620 5 HOH B1638 O 154.6 96.7 77.2 94.7 REMARK 620 6 HOH B1640 O 92.2 79.8 170.2 96.8 111.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG H 102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TE9 H 101 O1 REMARK 620 2 TE9 H 101 O3 62.1 REMARK 620 3 HOH H 202 O 52.3 57.9 REMARK 620 4 HOH H 203 O 138.2 78.5 96.1 REMARK 620 N 1 2 3 DBREF 9GEF A 411 1485 PDB 9GEF 9GEF 411 1485 DBREF 9GEF B 411 1485 PDB 9GEF 9GEF 411 1485 DBREF 9GEF E 9 15 PDB 9GEF 9GEF 9 15 DBREF 9GEF F 1 11 PDB 9GEF 9GEF 1 11 DBREF 9GEF G 9 15 PDB 9GEF 9GEF 9 15 DBREF 9GEF H 1 11 PDB 9GEF 9GEF 1 11 SEQRES 1 A 723 LEU LEU SER GLY LYS LEU THR PRO ALA GLN SER LYS ASN SEQRES 2 A 723 PRO ALA LYS ASN GLU LEU TYR LEU VAL GLU GLY ASP SER SEQRES 3 A 723 ALA GLY GLY SER ALA LYS GLN GLY ARG ASP ARG LYS PHE SEQRES 4 A 723 GLN ALA ILE LEU PRO LEU ARG GLY LYS VAL ILE ASN THR SEQRES 5 A 723 ALA LYS ALA LYS MET ALA ASP ILE LEU LYS ASN GLU GLU SEQRES 6 A 723 ILE ASN THR MET ILE TYR THR ILE GLY ALA GLY VAL GLY SEQRES 7 A 723 ALA ASP PHE SER ILE GLU ASP ALA ASN TYR ASP LYS ILE SEQRES 8 A 723 ILE ILE MET THR ASP ALA ASP THR ASP GLY ALA HIS ILE SEQRES 9 A 723 GLN THR LEU LEU LEU THR PHE PHE TYR ARG TYR MET ARG SEQRES 10 A 723 PRO LEU VAL GLU ALA GLY HIS VAL TYR ILE ALA LEU PRO SEQRES 11 A 723 PRO LEU TYR LYS MET SER LYS GLY LYS GLY LYS LYS GLU SEQRES 12 A 723 GLU VAL ALA TYR ALA TRP THR ASP GLY GLU LEU GLU GLU SEQRES 13 A 723 LEU ARG LYS GLN PHE GLY LYS GLY ALA THR LEU GLN ARG SEQRES 14 A 723 TYR LYS GLY LEU GLY GLU MET ASN ALA ASP GLN LEU TRP SEQRES 15 A 723 GLU THR THR MET ASN PRO GLU THR ARG THR LEU ILE ARG SEQRES 16 A 723 VAL THR ILE GLU ASP LEU ALA ARG ALA GLU ARG ARG VAL SEQRES 17 A 723 ASN VAL LEU MET GLY ASP LYS VAL GLU PRO ARG ARG LYS SEQRES 18 A 723 TRP ILE GLU ASP ASN VAL LYS PHE THR LEU GLU GLU ALA SEQRES 19 A 723 THR VAL PHE HIS MET SER ASN ILE GLN ASN MET SER LEU SEQRES 20 A 723 GLU ASP ILE MET GLY GLU ARG PHE GLY ARG TYR SER LYS SEQRES 21 A 723 TYR ILE ILE GLN ASP ARG ALA LEU PRO ASP ILE ARG ASP SEQRES 22 A 723 GLY LEU LYS PRO VAL GLN ARG ARG ILE LEU TYR SER MET SEQRES 23 A 723 ASN LYS ASP SER ASN THR PHE ASP LYS SER TYR ARG LYS SEQRES 24 A 723 SER ALA LYS SER VAL GLY ASN ILE MET GLY ASN PHE HIS SEQRES 25 A 723 PRO HIS GLY ASP SER SER ILE TYR ASP ALA MET VAL ARG SEQRES 26 A 723 MET SER GLN ASN TRP LYS ASN ARG GLU ILE LEU VAL GLU SEQRES 27 A 723 MET HIS GLY ASN ASN GLY SER MET ASP GLY ASP PRO PRO SEQRES 28 A 723 ALA ALA MET ARG TYR THR GLU ALA ARG LEU SER GLU ILE SEQRES 29 A 723 ALA GLY TYR LEU LEU GLN ASP ILE GLU LYS LYS THR VAL SEQRES 30 A 723 PRO PHE ALA TRP ASN PHE ASP ASP THR GLU LYS GLU PRO SEQRES 31 A 723 THR VAL LEU PRO ALA ALA PHE PRO ASN LEU LEU VAL ASN SEQRES 32 A 723 GLY SER THR GLY ILE SER ALA GLY TYR ALA THR ASP ILE SEQRES 33 A 723 PRO PRO HIS ASN LEU ALA GLU VAL ILE ASP ALA ALA VAL SEQRES 34 A 723 TYR MET ILE ASP HIS PRO THR ALA LYS ILE ASP LYS LEU SEQRES 35 A 723 MET GLU PHE LEU PRO GLY PRO ASP PHE PRO THR GLY ALA SEQRES 36 A 723 ILE ILE GLN GLY ARG ASP GLU ILE LYS LYS ALA TYR GLU SEQRES 37 A 723 THR GLY LYS GLY ARG VAL VAL VAL ARG SER LYS THR GLU SEQRES 38 A 723 ILE GLU LYS LEU LYS GLY GLY LYS GLU GLN ILE VAL ILE SEQRES 39 A 723 THR GLU ILE PRO TYR GLU ILE ASN LYS ALA ASN LEU VAL SEQRES 40 A 723 LYS LYS ILE ASP ASP VAL ARG VAL ASN ASN LYS VAL ALA SEQRES 41 A 723 GLY ILE ALA GLU VAL ARG ASP GLU SER ASP ARG ASP GLY SEQRES 42 A 723 LEU ARG ILE ALA ILE GLU LEU LYS LYS ASP ALA ASN THR SEQRES 43 A 723 GLU LEU VAL LEU ASN TYR LEU PHE LYS TYR THR ASP LEU SEQRES 44 A 723 GLN ILE ASN TYR ASN PHE ASN MET VAL ALA ILE ASP ASN SEQRES 45 A 723 PHE THR PRO ARG GLN VAL GLY ILE VAL PRO ILE LEU SER SEQRES 46 A 723 SER TYR ILE ALA HIS ARG ARG GLU VAL ILE LEU ALA ARG SEQRES 47 A 723 SER ARG PHE ASP LYS GLU LYS ALA GLU LYS ARG LEU HIS SEQRES 48 A 723 ILE VAL GLU GLY LEU ILE ARG VAL ILE SER ILE LEU ASP SEQRES 49 A 723 GLU VAL ILE ALA LEU ILE ARG ALA SER GLU ASN LYS ALA SEQRES 50 A 723 ASP ALA LYS GLU ASN LEU LYS VAL SER TYR ASP PHE THR SEQRES 51 A 723 GLU GLU GLN ALA GLU ALA ILE VAL THR LEU GLN LEU TYR SEQRES 52 A 723 ARG LEU THR ASN THR ASP VAL VAL VAL LEU GLN GLU GLU SEQRES 53 A 723 GLU ALA GLU LEU ARG GLU LYS ILE ALA MET LEU ALA ALA SEQRES 54 A 723 ILE ILE GLY ASP GLU ARG THR MET TYR ASN LEU MET LYS SEQRES 55 A 723 LYS GLU LEU ARG GLU VAL LYS LYS LYS PHE ALA THR PRO SEQRES 56 A 723 ARG LEU SER SER LEU GLU ASP THR SEQRES 1 B 723 LEU LEU SER GLY LYS LEU THR PRO ALA GLN SER LYS ASN SEQRES 2 B 723 PRO ALA LYS ASN GLU LEU TYR LEU VAL GLU GLY ASP SER SEQRES 3 B 723 ALA GLY GLY SER ALA LYS GLN GLY ARG ASP ARG LYS PHE SEQRES 4 B 723 GLN ALA ILE LEU PRO LEU ARG GLY LYS VAL ILE ASN THR SEQRES 5 B 723 ALA LYS ALA LYS MET ALA ASP ILE LEU LYS ASN GLU GLU SEQRES 6 B 723 ILE ASN THR MET ILE TYR THR ILE GLY ALA GLY VAL GLY SEQRES 7 B 723 ALA ASP PHE SER ILE GLU ASP ALA ASN TYR ASP LYS ILE SEQRES 8 B 723 ILE ILE MET THR ASP ALA ASP THR ASP GLY ALA HIS ILE SEQRES 9 B 723 GLN THR LEU LEU LEU THR PHE PHE TYR ARG TYR MET ARG SEQRES 10 B 723 PRO LEU VAL GLU ALA GLY HIS VAL TYR ILE ALA LEU PRO SEQRES 11 B 723 PRO LEU TYR LYS MET SER LYS GLY LYS GLY LYS LYS GLU SEQRES 12 B 723 GLU VAL ALA TYR ALA TRP THR ASP GLY GLU LEU GLU GLU SEQRES 13 B 723 LEU ARG LYS GLN PHE GLY LYS GLY ALA THR LEU GLN ARG SEQRES 14 B 723 TYR LYS GLY LEU GLY GLU MET ASN ALA ASP GLN LEU TRP SEQRES 15 B 723 GLU THR THR MET ASN PRO GLU THR ARG THR LEU ILE ARG SEQRES 16 B 723 VAL THR ILE GLU ASP LEU ALA ARG ALA GLU ARG ARG VAL SEQRES 17 B 723 ASN VAL LEU MET GLY ASP LYS VAL GLU PRO ARG ARG LYS SEQRES 18 B 723 TRP ILE GLU ASP ASN VAL LYS PHE THR LEU GLU GLU ALA SEQRES 19 B 723 THR VAL PHE HIS MET SER ASN ILE GLN ASN MET SER LEU SEQRES 20 B 723 GLU ASP ILE MET GLY GLU ARG PHE GLY ARG TYR SER LYS SEQRES 21 B 723 TYR ILE ILE GLN ASP ARG ALA LEU PRO ASP ILE ARG ASP SEQRES 22 B 723 GLY LEU LYS PRO VAL GLN ARG ARG ILE LEU TYR SER MET SEQRES 23 B 723 ASN LYS ASP SER ASN THR PHE ASP LYS SER TYR ARG LYS SEQRES 24 B 723 SER ALA LYS SER VAL GLY ASN ILE MET GLY ASN PHE HIS SEQRES 25 B 723 PRO HIS GLY ASP SER SER ILE TYR ASP ALA MET VAL ARG SEQRES 26 B 723 MET SER GLN ASN TRP LYS ASN ARG GLU ILE LEU VAL GLU SEQRES 27 B 723 MET HIS GLY ASN ASN GLY SER MET ASP GLY ASP PRO PRO SEQRES 28 B 723 ALA ALA MET ARG TYR THR GLU ALA ARG LEU SER GLU ILE SEQRES 29 B 723 ALA GLY TYR LEU LEU GLN ASP ILE GLU LYS LYS THR VAL SEQRES 30 B 723 PRO PHE ALA TRP ASN PHE ASP ASP THR GLU LYS GLU PRO SEQRES 31 B 723 THR VAL LEU PRO ALA ALA PHE PRO ASN LEU LEU VAL ASN SEQRES 32 B 723 GLY SER THR GLY ILE SER ALA GLY TYR ALA THR ASP ILE SEQRES 33 B 723 PRO PRO HIS ASN LEU ALA GLU VAL ILE ASP ALA ALA VAL SEQRES 34 B 723 TYR MET ILE ASP HIS PRO THR ALA LYS ILE ASP LYS LEU SEQRES 35 B 723 MET GLU PHE LEU PRO GLY PRO ASP PHE PRO THR GLY ALA SEQRES 36 B 723 ILE ILE GLN GLY ARG ASP GLU ILE LYS LYS ALA TYR GLU SEQRES 37 B 723 THR GLY LYS GLY ARG VAL VAL VAL ARG SER LYS THR GLU SEQRES 38 B 723 ILE GLU LYS LEU LYS GLY GLY LYS GLU GLN ILE VAL ILE SEQRES 39 B 723 THR GLU ILE PRO TYR GLU ILE ASN LYS ALA ASN LEU VAL SEQRES 40 B 723 LYS LYS ILE ASP ASP VAL ARG VAL ASN ASN LYS VAL ALA SEQRES 41 B 723 GLY ILE ALA GLU VAL ARG ASP GLU SER ASP ARG ASP GLY SEQRES 42 B 723 LEU ARG ILE ALA ILE GLU LEU LYS LYS ASP ALA ASN THR SEQRES 43 B 723 GLU LEU VAL LEU ASN TYR LEU PHE LYS TYR THR ASP LEU SEQRES 44 B 723 GLN ILE ASN TYR ASN PHE ASN MET VAL ALA ILE ASP ASN SEQRES 45 B 723 PHE THR PRO ARG GLN VAL GLY ILE VAL PRO ILE LEU SER SEQRES 46 B 723 SER TYR ILE ALA HIS ARG ARG GLU VAL ILE LEU ALA ARG SEQRES 47 B 723 SER ARG PHE ASP LYS GLU LYS ALA GLU LYS ARG LEU HIS SEQRES 48 B 723 ILE VAL GLU GLY LEU ILE ARG VAL ILE SER ILE LEU ASP SEQRES 49 B 723 GLU VAL ILE ALA LEU ILE ARG ALA SER GLU ASN LYS ALA SEQRES 50 B 723 ASP ALA LYS GLU ASN LEU LYS VAL SER TYR ASP PHE THR SEQRES 51 B 723 GLU GLU GLN ALA GLU ALA ILE VAL THR LEU GLN LEU TYR SEQRES 52 B 723 ARG LEU THR ASN THR ASP VAL VAL VAL LEU GLN GLU GLU SEQRES 53 B 723 GLU ALA GLU LEU ARG GLU LYS ILE ALA MET LEU ALA ALA SEQRES 54 B 723 ILE ILE GLY ASP GLU ARG THR MET TYR ASN LEU MET LYS SEQRES 55 B 723 LYS GLU LEU ARG GLU VAL LYS LYS LYS PHE ALA THR PRO SEQRES 56 B 723 ARG LEU SER SER LEU GLU ASP THR SEQRES 1 E 7 DT DG DT DG DG DA DT SEQRES 1 F 11 DG DG DT DT DA DT DC DC DA DC DA SEQRES 1 G 7 DG DT DA DA DT DA DC SEQRES 1 H 11 DA DA DC DC DG DT DA DT DT DA DC HET MPD A1501 8 HET MG A1502 1 HET MG A1503 1 HET K A1504 1 HET K A1505 1 HET K A1506 1 HET CL A1507 1 HET MPD A1508 8 HET MPD B1501 8 HET MPD B1502 8 HET MG B1503 1 HET K B1504 1 HET K B1505 1 HET K B1506 1 HET K B1507 1 HET K B1508 1 HET CL B1509 1 HET ACT B1510 4 HET TE9 F 101 30 HET TE9 H 101 30 HET MG H 102 1 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION HETNAM TE9 DELAFLOXACIN HETSYN TE9 1-[6-AZANYL-3,5-BIS(FLUORANYL)PYRIDIN-2-YL]-8- HETSYN 2 TE9 CHLORANYL-6-FLUORANYL-7-(3-OXIDANYLAZETIDIN-1-YL)-4- HETSYN 3 TE9 OXIDANYLIDENE-QUINOLINE-3-CARBOXYLIC ACID FORMUL 7 MPD 4(C6 H14 O2) FORMUL 8 MG 4(MG 2+) FORMUL 10 K 8(K 1+) FORMUL 13 CL 2(CL 1-) FORMUL 24 ACT C2 H3 O2 1- FORMUL 25 TE9 2(C18 H12 CL F3 N4 O4) FORMUL 28 HOH *108(H2 O) HELIX 1 AA1 GLY A 434 ARG A 445 1 12 HELIX 2 AA2 ALA A 468 LYS A 472 5 5 HELIX 3 AA3 ASN A 473 GLY A 484 1 12 HELIX 4 AA4 SER A 492 ALA A 496 5 5 HELIX 5 AA5 ASP A 508 MET A 526 1 19 HELIX 6 AA6 MET A 526 ALA A 532 1 7 HELIX 7 AA7 THR A 560 ARG A 568 1 9 HELIX 8 AA8 GLY A 582 MET A 586 5 5 HELIX 9 AA9 ASN A 587 MET A 596 1 10 HELIX 10 AB1 ASP A 610 GLY A 623 1 14 HELIX 11 AB2 LYS A 625 VAL A 637 1 13 HELIX 12 AB3 LEU A 1009 ASP A 1027 1 19 HELIX 13 AB4 LYS A 1038 ASP A 1051 1 14 HELIX 14 AB5 SER A 1062 PHE A 1073 1 12 HELIX 15 AB6 GLY A 1077 MET A 1088 1 12 HELIX 16 AB7 SER A 1124 GLN A 1132 1 9 HELIX 17 AB8 ASP A 1133 LYS A 1137 5 5 HELIX 18 AB9 PRO A 1160 GLY A 1166 1 7 HELIX 19 AC1 ASN A 1182 HIS A 1196 1 15 HELIX 20 AC2 LYS A 1200 LEU A 1208 1 9 HELIX 21 AC3 GLY A 1221 GLY A 1232 1 12 HELIX 22 AC4 ASN A 1264 ASN A 1279 1 16 HELIX 23 AC5 ASN A 1307 THR A 1319 1 13 HELIX 24 AC6 GLY A 1341 ILE A 1384 1 44 HELIX 25 AC7 ILE A 1384 ALA A 1394 1 11 HELIX 26 AC8 ASN A 1397 ASP A 1410 1 14 HELIX 27 AC9 THR A 1412 THR A 1421 1 10 HELIX 28 AD1 GLN A 1423 THR A 1428 5 6 HELIX 29 AD2 ASP A 1431 ASP A 1455 1 25 HELIX 30 AD3 ASP A 1455 ALA A 1475 1 21 HELIX 31 AD4 GLY B 434 ARG B 445 1 12 HELIX 32 AD5 ASP B 469 LYS B 472 5 4 HELIX 33 AD6 ASN B 473 GLY B 484 1 12 HELIX 34 AD7 ILE B 493 ALA B 496 5 4 HELIX 35 AD8 ASP B 508 MET B 526 1 19 HELIX 36 AD9 MET B 526 ALA B 532 1 7 HELIX 37 AE1 THR B 560 PHE B 571 1 12 HELIX 38 AE2 GLY B 582 MET B 586 5 5 HELIX 39 AE3 ASN B 587 MET B 596 1 10 HELIX 40 AE4 ASP B 610 GLY B 623 1 14 HELIX 41 AE5 LYS B 625 VAL B 637 1 13 HELIX 42 AE6 LEU B 1009 ASP B 1027 1 19 HELIX 43 AE7 LYS B 1038 ASP B 1051 1 14 HELIX 44 AE8 SER B 1062 PHE B 1073 1 12 HELIX 45 AE9 GLY B 1077 MET B 1088 1 12 HELIX 46 AF1 SER B 1124 GLN B 1132 1 9 HELIX 47 AF2 ASP B 1133 LYS B 1137 5 5 HELIX 48 AF3 PRO B 1160 GLY B 1166 1 7 HELIX 49 AF4 ASN B 1182 HIS B 1196 1 15 HELIX 50 AF5 LYS B 1200 MET B 1205 1 6 HELIX 51 AF6 GLY B 1221 GLY B 1232 1 12 HELIX 52 AF7 ASN B 1264 ASN B 1279 1 16 HELIX 53 AF8 ASN B 1307 THR B 1319 1 13 HELIX 54 AF9 GLY B 1341 ILE B 1384 1 44 HELIX 55 AG1 ILE B 1384 ALA B 1394 1 11 HELIX 56 AG2 ASN B 1397 ASP B 1410 1 14 HELIX 57 AG3 THR B 1412 THR B 1421 1 10 HELIX 58 AG4 GLN B 1423 THR B 1428 5 6 HELIX 59 AG5 ASP B 1431 ASP B 1455 1 25 HELIX 60 AG6 ASP B 1455 ALA B 1475 1 21 SHEET 1 AA1 6 GLN A 450 LEU A 455 0 SHEET 2 AA1 6 GLU A 428 GLU A 433 1 N VAL A 432 O LEU A 455 SHEET 3 AA1 6 LYS A 500 MET A 504 1 O ILE A 502 N LEU A 431 SHEET 4 AA1 6 VAL A 535 ILE A 537 1 O TYR A 536 N ILE A 503 SHEET 5 AA1 6 ILE A 604 THR A 607 -1 O ILE A 604 N ILE A 537 SHEET 6 AA1 6 ASN A1006 SER A1008 1 O MET A1007 N THR A 607 SHEET 1 AA2 3 TYR A 557 ALA A 558 0 SHEET 2 AA2 3 TYR A 543 LYS A 544 -1 N TYR A 543 O ALA A 558 SHEET 3 AA2 3 GLN A 578 ARG A 579 -1 O GLN A 578 N LYS A 544 SHEET 1 AA3 3 ARG A1060 LYS A1061 0 SHEET 2 AA3 3 GLU A1120 LEU A1123 -1 O ALA A1121 N ARG A1060 SHEET 3 AA3 3 VAL A1099 HIS A1102 -1 N GLU A1100 O ARG A1122 SHEET 1 AA4 2 PHE A1141 TRP A1143 0 SHEET 2 AA4 2 LYS A1150 PRO A1152 -1 O GLU A1151 N ALA A1142 SHEET 1 AA5 2 SER A1167 ILE A1170 0 SHEET 2 AA5 2 ALA A1175 ILE A1178 -1 O ILE A1178 N SER A1167 SHEET 1 AA6 4 GLN A1322 ASN A1328 0 SHEET 2 AA6 4 LYS A1233 ARG A1239 -1 N VAL A1236 O TYR A1325 SHEET 3 AA6 4 ILE A1218 GLN A1220 -1 N GLN A1220 O VAL A1237 SHEET 4 AA6 4 SER A1481 GLU A1483 1 O SER A1481 N ILE A1219 SHEET 1 AA7 4 ILE A1244 LEU A1247 0 SHEET 2 AA7 4 LYS A1251 ILE A1256 -1 O LYS A1251 N LEU A1247 SHEET 3 AA7 4 ILE A1298 LEU A1302 -1 O ILE A1300 N ILE A1254 SHEET 4 AA7 4 ILE A1284 ASP A1289 -1 N ALA A1285 O GLU A1301 SHEET 1 AA8 2 VAL A1330 ASP A1333 0 SHEET 2 AA8 2 THR A1336 GLN A1339 -1 O THR A1336 N ASP A1333 SHEET 1 AA9 6 GLN B 450 LEU B 455 0 SHEET 2 AA9 6 GLU B 428 GLU B 433 1 N VAL B 432 O LEU B 455 SHEET 3 AA9 6 LYS B 500 MET B 504 1 O ILE B 502 N LEU B 431 SHEET 4 AA9 6 VAL B 535 ALA B 538 1 O ALA B 538 N ILE B 503 SHEET 5 AA9 6 LEU B 603 THR B 607 -1 O ILE B 604 N ILE B 537 SHEET 6 AA9 6 ASN B1006 SER B1008 1 O MET B1007 N THR B 607 SHEET 1 AB1 2 GLY B 486 VAL B 487 0 SHEET 2 AB1 2 ASP B 490 PHE B 491 -1 O ASP B 490 N VAL B 487 SHEET 1 AB2 3 VAL B 555 ALA B 558 0 SHEET 2 AB2 3 TYR B 543 SER B 546 -1 N MET B 545 O ALA B 556 SHEET 3 AB2 3 THR B 576 ARG B 579 -1 O THR B 576 N SER B 546 SHEET 1 AB3 3 ARG B1060 LYS B1061 0 SHEET 2 AB3 3 GLU B1120 LEU B1123 -1 O ALA B1121 N ARG B1060 SHEET 3 AB3 3 VAL B1099 HIS B1102 -1 N GLU B1100 O ARG B1122 SHEET 1 AB4 2 PHE B1141 TRP B1143 0 SHEET 2 AB4 2 LYS B1150 PRO B1152 -1 O GLU B1151 N ALA B1142 SHEET 1 AB5 2 SER B1167 ILE B1170 0 SHEET 2 AB5 2 ALA B1175 ILE B1178 -1 O ILE B1178 N SER B1167 SHEET 1 AB6 4 GLN B1322 ASN B1328 0 SHEET 2 AB6 4 LYS B1233 ARG B1239 -1 N VAL B1238 O ILE B1323 SHEET 3 AB6 4 ILE B1218 GLN B1220 -1 N GLN B1220 O VAL B1237 SHEET 4 AB6 4 SER B1481 GLU B1483 1 O SER B1481 N ILE B1219 SHEET 1 AB7 4 ILE B1244 LEU B1247 0 SHEET 2 AB7 4 LYS B1251 ILE B1256 -1 O LYS B1251 N LEU B1247 SHEET 3 AB7 4 ILE B1298 LEU B1302 -1 O ILE B1300 N ILE B1254 SHEET 4 AB7 4 ILE B1284 ASP B1289 -1 N ALA B1285 O GLU B1301 SHEET 1 AB8 2 VAL B1330 ASP B1333 0 SHEET 2 AB8 2 THR B1336 GLN B1339 -1 O THR B1336 N ASP B1333 LINK OD2 ASP A 506 MG MG A1503 1555 1555 2.03 LINK OD2 ASP A 508 MG MG A1503 1555 1555 2.12 LINK OD1 ASN A 587 K K B1504 1555 1555 2.88 LINK O MET A1101 K K A1504 1555 1555 2.90 LINK O GLY A1103 K K A1504 1555 1555 2.65 LINK OD1 ASN A1105 K K A1504 1555 1555 2.86 LINK O PHE A1316 K K A1506 1555 1555 2.65 LINK O LYS A1317 K K A1506 1555 1555 2.83 LINK O THR A1319 K K A1506 1555 1555 2.62 LINK O GLN A1322 K K A1506 1555 1555 2.51 LINK MG MG A1502 O HOH A1643 1555 1555 2.26 LINK MG MG A1502 O2 TE9 F 101 1555 1555 2.47 LINK MG MG A1502 O3 TE9 F 101 1555 1555 1.85 LINK MG MG A1502 O HOH F 202 1555 1555 2.16 LINK MG MG A1502 O HOH F 203 1555 1555 2.13 LINK MG MG A1503 O HOH A1603 1555 1555 2.17 LINK MG MG A1503 O HOH A1616 1555 1555 2.00 LINK MG MG A1503 O HOH A1617 1555 1555 2.07 LINK MG MG A1503 O HOH E 101 1555 1555 2.32 LINK K K A1504 O HOH A1630 1555 1555 2.86 LINK K K A1504 OD1 ASN B 587 1555 1555 2.60 LINK K K A1506 O HOH A1613 1555 1555 2.83 LINK K K A1506 O HOH A1642 1555 1555 2.81 LINK O ASP B 495 K K B1506 1555 1555 2.59 LINK OD1 ASN B 497 K K B1506 1555 1555 3.23 LINK OD2 ASP B 506 MG MG B1503 1555 1555 2.05 LINK OD2 ASP B 508 MG MG B1503 1555 1555 2.17 LINK O MET B1101 K K B1504 1555 1555 3.39 LINK O GLY B1103 K K B1504 1555 1555 2.51 LINK OD1 ASN B1105 K K B1504 1555 1555 2.64 LINK O PHE B1316 K K B1508 1555 1555 2.64 LINK O LYS B1317 K K B1508 1555 1555 2.86 LINK O THR B1319 K K B1508 1555 1555 2.57 LINK O GLN B1322 K K B1508 1555 1555 2.57 LINK O GLU B1396 K K B1505 1555 1555 2.96 LINK MG MG B1503 O HOH B1609 1555 1555 2.24 LINK MG MG B1503 O HOH B1614 1555 1555 2.15 LINK MG MG B1503 O HOH B1630 1555 1555 2.09 LINK MG MG B1503 O HOH G 101 1555 1555 2.27 LINK K K B1508 O HOH B1638 1555 1555 2.76 LINK K K B1508 O HOH B1640 1555 1555 3.09 LINK O1 TE9 H 101 MG MG H 102 1555 1555 2.79 LINK O3 TE9 H 101 MG MG H 102 1555 1555 2.27 LINK MG MG H 102 O HOH H 202 1555 1555 2.67 LINK MG MG H 102 O HOH H 203 1555 1555 1.85 CRYST1 158.533 158.533 210.820 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006308 0.003642 0.000000 0.00000 SCALE2 0.000000 0.007284 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004743 0.00000 CONECT 72312252 CONECT 73612252 CONECT 137312282 CONECT 270612253 CONECT 272412253 CONECT 273912253 CONECT 437112255 CONECT 438212255 CONECT 440312255 CONECT 442612255 CONECT 638312284 CONECT 639912284 CONECT 647612281 CONECT 648912281 CONECT 712612253 CONECT 845912282 CONECT 847712282 CONECT 849212282 CONECT1012412286 CONECT1013512286 CONECT1015612286 CONECT1017912286 CONECT1078012283 CONECT1224312244 CONECT1224412243122451224612247 CONECT1224512244 CONECT1224612244 CONECT122471224412248 CONECT12248122471224912250 CONECT1224912248 CONECT1225012248 CONECT1225112306123071239512449 CONECT1225112450 CONECT12252 723 7361235512368 CONECT122521236912445 CONECT12253 2706 2724 2739 7126 CONECT1225312382 CONECT12255 4371 4382 4403 4426 CONECT122551236512394 CONECT1225712258 CONECT1225812257122591226012261 CONECT1225912258 CONECT1226012258 CONECT122611225812262 CONECT12262122611226312264 CONECT1226312262 CONECT1226412262 CONECT1226512266 CONECT1226612265122671226812269 CONECT1226712266 CONECT1226812266 CONECT122691226612270 CONECT12270122691227112272 CONECT1227112270 CONECT1227212270 CONECT1227312274 CONECT1227412273122751227612277 CONECT1227512274 CONECT1227612274 CONECT122771227412278 CONECT12278122771227912280 CONECT1227912278 CONECT1228012278 CONECT12281 6476 64891240812413 CONECT122811242912454 CONECT12282 1373 8459 8477 8492 CONECT1228310780 CONECT12284 6383 6399 CONECT1228610124101351015610179 CONECT122861243712439 CONECT12288122891229012291 CONECT1228912288 CONECT1229012288 CONECT1229112288 CONECT122921230812309 CONECT122931229412304 CONECT12294122931229512296 CONECT12295122941230512306 CONECT12296122941230712308 CONECT12297123021230312320 CONECT12298123011230312304 CONECT12299123001231112317 CONECT12300122991230412308 CONECT12301122981231812319 CONECT1230212297 CONECT123031229712298 CONECT12304122931229812300 CONECT1230512295 CONECT123061225112295 CONECT123071225112296 CONECT12308122921229612300 CONECT12309122921231012311 CONECT1231012309 CONECT12311122991230912312 CONECT12312123111231312316 CONECT123131231212314 CONECT12314123131231512316 CONECT1231512314 CONECT123161231212314 CONECT1231712299 CONECT1231812301 CONECT123191230112320 CONECT12320122971231912321 CONECT1232112320 CONECT123221233812339 CONECT123231232412334 CONECT12324123231232512326 CONECT12325123241233512336 CONECT12326123241233712338 CONECT12327123321233312350 CONECT12328123311233312334 CONECT12329123301234112347 CONECT12330123291233412338 CONECT12331123281234812349 CONECT1233212327 CONECT123331232712328 CONECT12334123231232812330 CONECT123351232512352 CONECT1233612325 CONECT123371232612352 CONECT12338123221232612330 CONECT12339123221234012341 CONECT1234012339 CONECT12341123291233912342 CONECT12342123411234312346 CONECT123431234212344 CONECT12344123431234512346 CONECT1234512344 CONECT123461234212344 CONECT1234712329 CONECT1234812331 CONECT123491233112350 CONECT12350123271234912351 CONECT1235112350 CONECT1235212335123371245712458 CONECT1235512252 CONECT1236512255 CONECT1236812252 CONECT1236912252 CONECT1238212253 CONECT1239412255 CONECT1239512251 CONECT1240812281 CONECT1241312281 CONECT1242912281 CONECT1243712286 CONECT1243912286 CONECT1244512252 CONECT1244912251 CONECT1245012251 CONECT1245412281 CONECT1245712352 CONECT1245812352 MASTER 564 0 21 60 54 0 0 612454 6 153 116 END