data_9GNR # _entry.id 9GNR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9GNR pdb_00009gnr 10.2210/pdb9gnr/pdb WWPDB D_1292141316 ? ? EMDB EMD-51478 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-07-23 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9GNR _pdbx_database_status.recvd_initial_deposition_date 2024-09-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of Sporosarcina pasteurii urease inhibited by NBPTO' _pdbx_database_related.db_id EMD-51478 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 4 _pdbx_contact_author.email stefano.ciurli@unibo.it _pdbx_contact_author.name_first Stefano _pdbx_contact_author.name_last Ciurli _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9557-926X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mazzei, L.' 1 ? 'Tria, G.' 2 ? 'Ciurli, S.' 3 ? 'Cianci, M.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Int.J.Biol.Macromol. _citation.journal_id_ASTM IJBMDR _citation.journal_id_CSD 0708 _citation.journal_id_ISSN 0141-8130 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 283 _citation.language ? _citation.page_first 137904 _citation.page_last 137904 _citation.title 'Exploring the conformational space of the mobile flap in Sporosarcina pasteurii urease by cryo-electron microscopy.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.ijbiomac.2024.137904 _citation.pdbx_database_id_PubMed 39571870 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mazzei, L.' 1 ? primary 'Tria, G.' 2 ? primary 'Ciurli, S.' 3 ? primary 'Cianci, M.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Urease subunit gamma' 11134.895 1 3.5.1.5 ? ? ? 2 polymer nat 'Urease subunit beta' 13529.061 1 3.5.1.5 ? ? ? 3 polymer nat 'Urease subunit alpha' 61575.648 1 3.5.1.5 ? ? ? 4 non-polymer syn 'NICKEL (II) ION' 58.693 2 ? ? ? ? 5 non-polymer syn DIAMIDOPHOSPHATE 96.026 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Urea amidohydrolase subunit gamma' 2 'Urea amidohydrolase subunit beta' 3 'Urea amidohydrolase subunit alpha' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;(CXM)HLNPAEKEKLQIFLASELALKRKARGLKLNYPEAVAIITSFIMEGARDGKTVAMLMEEGKHVLTRDDVMEGVPEM IDDIQAEATFPDGTKLVTVHNPIS ; ;MHLNPAEKEKLQIFLASELALKRKARGLKLNYPEAVAIITSFIMEGARDGKTVAMLMEEGKHVLTRDDVMEGVPEMIDDI QAEATFPDGTKLVTVHNPIS ; A ? 2 'polypeptide(L)' no no ;NYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEME VELTELGGNREVFGISDLTNGSVDNKELILQRAKELGYKGVE ; ;NYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEME VELTELGGNREVFGISDLTNGSVDNKELILQRAKELGYKGVE ; B ? 3 'polypeptide(L)' no yes ;MKINRQQYAESYGPTVGDQVRLADTDLWIEVEKDYTTYGDEANFGGGKVLREGMGENGTYTRTENVLDLLLTNALILDYT GIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQVDVALANGITTLFGG GTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHGSSIAPIMEQIDAGAAGL(KCX)IHEDWGATPASIDRSL TVADEADVQVAIHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHL DMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRTWQTADKMKKQRGPLAEEKN GSDNFRAKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFFGVKADRVIKGGIIAYAQIGDPSASIPTPQPVMG RRMYGTVGDLIHDTNITFMSKSSIQQGVPAKLGLKRRIGTVKNCRNIGKKDMKWNDVTTDIDINPETYEVKVDGEVLTCE PVKELPMAQRYFLF ; ;MKINRQQYAESYGPTVGDQVRLADTDLWIEVEKDYTTYGDEANFGGGKVLREGMGENGTYTRTENVLDLLLTNALILDYT GIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQVDVALANGITTLFGG GTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHGSSIAPIMEQIDAGAAGLKIHEDWGATPASIDRSLTVAD EADVQVAIHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLM VCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRTWQTADKMKKQRGPLAEEKNGSDN FRAKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFFGVKADRVIKGGIIAYAQIGDPSASIPTPQPVMGRRMY GTVGDLIHDTNITFMSKSSIQQGVPAKLGLKRRIGTVKNCRNIGKKDMKWNDVTTDIDINPETYEVKVDGEVLTCEPVKE LPMAQRYFLF ; C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'NICKEL (II) ION' NI 5 DIAMIDOPHOSPHATE 2PA # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CXM n 1 2 HIS n 1 3 LEU n 1 4 ASN n 1 5 PRO n 1 6 ALA n 1 7 GLU n 1 8 LYS n 1 9 GLU n 1 10 LYS n 1 11 LEU n 1 12 GLN n 1 13 ILE n 1 14 PHE n 1 15 LEU n 1 16 ALA n 1 17 SER n 1 18 GLU n 1 19 LEU n 1 20 ALA n 1 21 LEU n 1 22 LYS n 1 23 ARG n 1 24 LYS n 1 25 ALA n 1 26 ARG n 1 27 GLY n 1 28 LEU n 1 29 LYS n 1 30 LEU n 1 31 ASN n 1 32 TYR n 1 33 PRO n 1 34 GLU n 1 35 ALA n 1 36 VAL n 1 37 ALA n 1 38 ILE n 1 39 ILE n 1 40 THR n 1 41 SER n 1 42 PHE n 1 43 ILE n 1 44 MET n 1 45 GLU n 1 46 GLY n 1 47 ALA n 1 48 ARG n 1 49 ASP n 1 50 GLY n 1 51 LYS n 1 52 THR n 1 53 VAL n 1 54 ALA n 1 55 MET n 1 56 LEU n 1 57 MET n 1 58 GLU n 1 59 GLU n 1 60 GLY n 1 61 LYS n 1 62 HIS n 1 63 VAL n 1 64 LEU n 1 65 THR n 1 66 ARG n 1 67 ASP n 1 68 ASP n 1 69 VAL n 1 70 MET n 1 71 GLU n 1 72 GLY n 1 73 VAL n 1 74 PRO n 1 75 GLU n 1 76 MET n 1 77 ILE n 1 78 ASP n 1 79 ASP n 1 80 ILE n 1 81 GLN n 1 82 ALA n 1 83 GLU n 1 84 ALA n 1 85 THR n 1 86 PHE n 1 87 PRO n 1 88 ASP n 1 89 GLY n 1 90 THR n 1 91 LYS n 1 92 LEU n 1 93 VAL n 1 94 THR n 1 95 VAL n 1 96 HIS n 1 97 ASN n 1 98 PRO n 1 99 ILE n 1 100 SER n 2 1 ASN n 2 2 TYR n 2 3 ILE n 2 4 VAL n 2 5 PRO n 2 6 GLY n 2 7 GLU n 2 8 TYR n 2 9 ARG n 2 10 VAL n 2 11 ALA n 2 12 GLU n 2 13 GLY n 2 14 GLU n 2 15 ILE n 2 16 GLU n 2 17 ILE n 2 18 ASN n 2 19 ALA n 2 20 GLY n 2 21 ARG n 2 22 GLU n 2 23 LYS n 2 24 THR n 2 25 THR n 2 26 ILE n 2 27 ARG n 2 28 VAL n 2 29 SER n 2 30 ASN n 2 31 THR n 2 32 GLY n 2 33 ASP n 2 34 ARG n 2 35 PRO n 2 36 ILE n 2 37 GLN n 2 38 VAL n 2 39 GLY n 2 40 SER n 2 41 HIS n 2 42 ILE n 2 43 HIS n 2 44 PHE n 2 45 VAL n 2 46 GLU n 2 47 VAL n 2 48 ASN n 2 49 LYS n 2 50 GLU n 2 51 LEU n 2 52 LEU n 2 53 PHE n 2 54 ASP n 2 55 ARG n 2 56 ALA n 2 57 GLU n 2 58 GLY n 2 59 ILE n 2 60 GLY n 2 61 ARG n 2 62 ARG n 2 63 LEU n 2 64 ASN n 2 65 ILE n 2 66 PRO n 2 67 SER n 2 68 GLY n 2 69 THR n 2 70 ALA n 2 71 ALA n 2 72 ARG n 2 73 PHE n 2 74 GLU n 2 75 PRO n 2 76 GLY n 2 77 GLU n 2 78 GLU n 2 79 MET n 2 80 GLU n 2 81 VAL n 2 82 GLU n 2 83 LEU n 2 84 THR n 2 85 GLU n 2 86 LEU n 2 87 GLY n 2 88 GLY n 2 89 ASN n 2 90 ARG n 2 91 GLU n 2 92 VAL n 2 93 PHE n 2 94 GLY n 2 95 ILE n 2 96 SER n 2 97 ASP n 2 98 LEU n 2 99 THR n 2 100 ASN n 2 101 GLY n 2 102 SER n 2 103 VAL n 2 104 ASP n 2 105 ASN n 2 106 LYS n 2 107 GLU n 2 108 LEU n 2 109 ILE n 2 110 LEU n 2 111 GLN n 2 112 ARG n 2 113 ALA n 2 114 LYS n 2 115 GLU n 2 116 LEU n 2 117 GLY n 2 118 TYR n 2 119 LYS n 2 120 GLY n 2 121 VAL n 2 122 GLU n 3 1 MET n 3 2 LYS n 3 3 ILE n 3 4 ASN n 3 5 ARG n 3 6 GLN n 3 7 GLN n 3 8 TYR n 3 9 ALA n 3 10 GLU n 3 11 SER n 3 12 TYR n 3 13 GLY n 3 14 PRO n 3 15 THR n 3 16 VAL n 3 17 GLY n 3 18 ASP n 3 19 GLN n 3 20 VAL n 3 21 ARG n 3 22 LEU n 3 23 ALA n 3 24 ASP n 3 25 THR n 3 26 ASP n 3 27 LEU n 3 28 TRP n 3 29 ILE n 3 30 GLU n 3 31 VAL n 3 32 GLU n 3 33 LYS n 3 34 ASP n 3 35 TYR n 3 36 THR n 3 37 THR n 3 38 TYR n 3 39 GLY n 3 40 ASP n 3 41 GLU n 3 42 ALA n 3 43 ASN n 3 44 PHE n 3 45 GLY n 3 46 GLY n 3 47 GLY n 3 48 LYS n 3 49 VAL n 3 50 LEU n 3 51 ARG n 3 52 GLU n 3 53 GLY n 3 54 MET n 3 55 GLY n 3 56 GLU n 3 57 ASN n 3 58 GLY n 3 59 THR n 3 60 TYR n 3 61 THR n 3 62 ARG n 3 63 THR n 3 64 GLU n 3 65 ASN n 3 66 VAL n 3 67 LEU n 3 68 ASP n 3 69 LEU n 3 70 LEU n 3 71 LEU n 3 72 THR n 3 73 ASN n 3 74 ALA n 3 75 LEU n 3 76 ILE n 3 77 LEU n 3 78 ASP n 3 79 TYR n 3 80 THR n 3 81 GLY n 3 82 ILE n 3 83 TYR n 3 84 LYS n 3 85 ALA n 3 86 ASP n 3 87 ILE n 3 88 GLY n 3 89 VAL n 3 90 LYS n 3 91 ASP n 3 92 GLY n 3 93 TYR n 3 94 ILE n 3 95 VAL n 3 96 GLY n 3 97 ILE n 3 98 GLY n 3 99 LYS n 3 100 GLY n 3 101 GLY n 3 102 ASN n 3 103 PRO n 3 104 ASP n 3 105 ILE n 3 106 MET n 3 107 ASP n 3 108 GLY n 3 109 VAL n 3 110 THR n 3 111 PRO n 3 112 ASN n 3 113 MET n 3 114 ILE n 3 115 VAL n 3 116 GLY n 3 117 THR n 3 118 ALA n 3 119 THR n 3 120 GLU n 3 121 VAL n 3 122 ILE n 3 123 ALA n 3 124 ALA n 3 125 GLU n 3 126 GLY n 3 127 LYS n 3 128 ILE n 3 129 VAL n 3 130 THR n 3 131 ALA n 3 132 GLY n 3 133 GLY n 3 134 ILE n 3 135 ASP n 3 136 THR n 3 137 HIS n 3 138 VAL n 3 139 HIS n 3 140 PHE n 3 141 ILE n 3 142 ASN n 3 143 PRO n 3 144 ASP n 3 145 GLN n 3 146 VAL n 3 147 ASP n 3 148 VAL n 3 149 ALA n 3 150 LEU n 3 151 ALA n 3 152 ASN n 3 153 GLY n 3 154 ILE n 3 155 THR n 3 156 THR n 3 157 LEU n 3 158 PHE n 3 159 GLY n 3 160 GLY n 3 161 GLY n 3 162 THR n 3 163 GLY n 3 164 PRO n 3 165 ALA n 3 166 GLU n 3 167 GLY n 3 168 SER n 3 169 LYS n 3 170 ALA n 3 171 THR n 3 172 THR n 3 173 VAL n 3 174 THR n 3 175 PRO n 3 176 GLY n 3 177 PRO n 3 178 TRP n 3 179 ASN n 3 180 ILE n 3 181 GLU n 3 182 LYS n 3 183 MET n 3 184 LEU n 3 185 LYS n 3 186 SER n 3 187 THR n 3 188 GLU n 3 189 GLY n 3 190 LEU n 3 191 PRO n 3 192 ILE n 3 193 ASN n 3 194 VAL n 3 195 GLY n 3 196 ILE n 3 197 LEU n 3 198 GLY n 3 199 LYS n 3 200 GLY n 3 201 HIS n 3 202 GLY n 3 203 SER n 3 204 SER n 3 205 ILE n 3 206 ALA n 3 207 PRO n 3 208 ILE n 3 209 MET n 3 210 GLU n 3 211 GLN n 3 212 ILE n 3 213 ASP n 3 214 ALA n 3 215 GLY n 3 216 ALA n 3 217 ALA n 3 218 GLY n 3 219 LEU n 3 220 KCX n 3 221 ILE n 3 222 HIS n 3 223 GLU n 3 224 ASP n 3 225 TRP n 3 226 GLY n 3 227 ALA n 3 228 THR n 3 229 PRO n 3 230 ALA n 3 231 SER n 3 232 ILE n 3 233 ASP n 3 234 ARG n 3 235 SER n 3 236 LEU n 3 237 THR n 3 238 VAL n 3 239 ALA n 3 240 ASP n 3 241 GLU n 3 242 ALA n 3 243 ASP n 3 244 VAL n 3 245 GLN n 3 246 VAL n 3 247 ALA n 3 248 ILE n 3 249 HIS n 3 250 SER n 3 251 ASP n 3 252 THR n 3 253 LEU n 3 254 ASN n 3 255 GLU n 3 256 ALA n 3 257 GLY n 3 258 PHE n 3 259 LEU n 3 260 GLU n 3 261 ASP n 3 262 THR n 3 263 LEU n 3 264 ARG n 3 265 ALA n 3 266 ILE n 3 267 ASN n 3 268 GLY n 3 269 ARG n 3 270 VAL n 3 271 ILE n 3 272 HIS n 3 273 SER n 3 274 PHE n 3 275 HIS n 3 276 VAL n 3 277 GLU n 3 278 GLY n 3 279 ALA n 3 280 GLY n 3 281 GLY n 3 282 GLY n 3 283 HIS n 3 284 ALA n 3 285 PRO n 3 286 ASP n 3 287 ILE n 3 288 MET n 3 289 ALA n 3 290 MET n 3 291 ALA n 3 292 GLY n 3 293 HIS n 3 294 PRO n 3 295 ASN n 3 296 VAL n 3 297 LEU n 3 298 PRO n 3 299 SER n 3 300 SER n 3 301 THR n 3 302 ASN n 3 303 PRO n 3 304 THR n 3 305 ARG n 3 306 PRO n 3 307 PHE n 3 308 THR n 3 309 VAL n 3 310 ASN n 3 311 THR n 3 312 ILE n 3 313 ASP n 3 314 GLU n 3 315 HIS n 3 316 LEU n 3 317 ASP n 3 318 MET n 3 319 LEU n 3 320 MET n 3 321 VAL n 3 322 CYS n 3 323 HIS n 3 324 HIS n 3 325 LEU n 3 326 LYS n 3 327 GLN n 3 328 ASN n 3 329 ILE n 3 330 PRO n 3 331 GLU n 3 332 ASP n 3 333 VAL n 3 334 ALA n 3 335 PHE n 3 336 ALA n 3 337 ASP n 3 338 SER n 3 339 ARG n 3 340 ILE n 3 341 ARG n 3 342 PRO n 3 343 GLU n 3 344 THR n 3 345 ILE n 3 346 ALA n 3 347 ALA n 3 348 GLU n 3 349 ASP n 3 350 ILE n 3 351 LEU n 3 352 HIS n 3 353 ASP n 3 354 LEU n 3 355 GLY n 3 356 ILE n 3 357 ILE n 3 358 SER n 3 359 MET n 3 360 MET n 3 361 SER n 3 362 THR n 3 363 ASP n 3 364 ALA n 3 365 LEU n 3 366 ALA n 3 367 MET n 3 368 GLY n 3 369 ARG n 3 370 ALA n 3 371 GLY n 3 372 GLU n 3 373 MET n 3 374 VAL n 3 375 LEU n 3 376 ARG n 3 377 THR n 3 378 TRP n 3 379 GLN n 3 380 THR n 3 381 ALA n 3 382 ASP n 3 383 LYS n 3 384 MET n 3 385 LYS n 3 386 LYS n 3 387 GLN n 3 388 ARG n 3 389 GLY n 3 390 PRO n 3 391 LEU n 3 392 ALA n 3 393 GLU n 3 394 GLU n 3 395 LYS n 3 396 ASN n 3 397 GLY n 3 398 SER n 3 399 ASP n 3 400 ASN n 3 401 PHE n 3 402 ARG n 3 403 ALA n 3 404 LYS n 3 405 ARG n 3 406 TYR n 3 407 VAL n 3 408 SER n 3 409 LYS n 3 410 TYR n 3 411 THR n 3 412 ILE n 3 413 ASN n 3 414 PRO n 3 415 ALA n 3 416 ILE n 3 417 ALA n 3 418 GLN n 3 419 GLY n 3 420 ILE n 3 421 ALA n 3 422 HIS n 3 423 GLU n 3 424 VAL n 3 425 GLY n 3 426 SER n 3 427 ILE n 3 428 GLU n 3 429 GLU n 3 430 GLY n 3 431 LYS n 3 432 PHE n 3 433 ALA n 3 434 ASP n 3 435 LEU n 3 436 VAL n 3 437 LEU n 3 438 TRP n 3 439 GLU n 3 440 PRO n 3 441 LYS n 3 442 PHE n 3 443 PHE n 3 444 GLY n 3 445 VAL n 3 446 LYS n 3 447 ALA n 3 448 ASP n 3 449 ARG n 3 450 VAL n 3 451 ILE n 3 452 LYS n 3 453 GLY n 3 454 GLY n 3 455 ILE n 3 456 ILE n 3 457 ALA n 3 458 TYR n 3 459 ALA n 3 460 GLN n 3 461 ILE n 3 462 GLY n 3 463 ASP n 3 464 PRO n 3 465 SER n 3 466 ALA n 3 467 SER n 3 468 ILE n 3 469 PRO n 3 470 THR n 3 471 PRO n 3 472 GLN n 3 473 PRO n 3 474 VAL n 3 475 MET n 3 476 GLY n 3 477 ARG n 3 478 ARG n 3 479 MET n 3 480 TYR n 3 481 GLY n 3 482 THR n 3 483 VAL n 3 484 GLY n 3 485 ASP n 3 486 LEU n 3 487 ILE n 3 488 HIS n 3 489 ASP n 3 490 THR n 3 491 ASN n 3 492 ILE n 3 493 THR n 3 494 PHE n 3 495 MET n 3 496 SER n 3 497 LYS n 3 498 SER n 3 499 SER n 3 500 ILE n 3 501 GLN n 3 502 GLN n 3 503 GLY n 3 504 VAL n 3 505 PRO n 3 506 ALA n 3 507 LYS n 3 508 LEU n 3 509 GLY n 3 510 LEU n 3 511 LYS n 3 512 ARG n 3 513 ARG n 3 514 ILE n 3 515 GLY n 3 516 THR n 3 517 VAL n 3 518 LYS n 3 519 ASN n 3 520 CYS n 3 521 ARG n 3 522 ASN n 3 523 ILE n 3 524 GLY n 3 525 LYS n 3 526 LYS n 3 527 ASP n 3 528 MET n 3 529 LYS n 3 530 TRP n 3 531 ASN n 3 532 ASP n 3 533 VAL n 3 534 THR n 3 535 THR n 3 536 ASP n 3 537 ILE n 3 538 ASP n 3 539 ILE n 3 540 ASN n 3 541 PRO n 3 542 GLU n 3 543 THR n 3 544 TYR n 3 545 GLU n 3 546 VAL n 3 547 LYS n 3 548 VAL n 3 549 ASP n 3 550 GLY n 3 551 GLU n 3 552 VAL n 3 553 LEU n 3 554 THR n 3 555 CYS n 3 556 GLU n 3 557 PRO n 3 558 VAL n 3 559 LYS n 3 560 GLU n 3 561 LEU n 3 562 PRO n 3 563 MET n 3 564 ALA n 3 565 GLN n 3 566 ARG n 3 567 TYR n 3 568 PHE n 3 569 LEU n 3 570 PHE n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 100 ? 'Sporosarcina pasteurii' 1474 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 122 ? 'Sporosarcina pasteurii' 1474 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 1 570 ? 'Sporosarcina pasteurii' 1474 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2PA non-polymer . DIAMIDOPHOSPHATE ? 'H5 N2 O2 P' 96.026 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CXM 'L-peptide linking' n N-CARBOXYMETHIONINE ? 'C6 H11 N O4 S' 193.221 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KCX 'L-peptide linking' n 'LYSINE NZ-CARBOXYLIC ACID' ? 'C7 H14 N2 O4' 190.197 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CXM 1 1 1 CXM CXM A . n A 1 2 HIS 2 2 2 HIS HIS A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 MET 57 57 57 MET MET A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 HIS 62 62 62 HIS HIS A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 MET 70 70 70 MET MET A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 MET 76 76 76 MET MET A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 SER 100 100 100 SER SER A . n B 2 1 ASN 1 5 5 ASN ASN B . n B 2 2 TYR 2 6 6 TYR TYR B . n B 2 3 ILE 3 7 7 ILE ILE B . n B 2 4 VAL 4 8 8 VAL VAL B . n B 2 5 PRO 5 9 9 PRO PRO B . n B 2 6 GLY 6 10 10 GLY GLY B . n B 2 7 GLU 7 11 11 GLU GLU B . n B 2 8 TYR 8 12 12 TYR TYR B . n B 2 9 ARG 9 13 13 ARG ARG B . n B 2 10 VAL 10 14 14 VAL VAL B . n B 2 11 ALA 11 15 15 ALA ALA B . n B 2 12 GLU 12 16 16 GLU GLU B . n B 2 13 GLY 13 17 17 GLY GLY B . n B 2 14 GLU 14 18 18 GLU GLU B . n B 2 15 ILE 15 19 19 ILE ILE B . n B 2 16 GLU 16 20 20 GLU GLU B . n B 2 17 ILE 17 21 21 ILE ILE B . n B 2 18 ASN 18 22 22 ASN ASN B . n B 2 19 ALA 19 23 23 ALA ALA B . n B 2 20 GLY 20 24 24 GLY GLY B . n B 2 21 ARG 21 25 25 ARG ARG B . n B 2 22 GLU 22 26 26 GLU GLU B . n B 2 23 LYS 23 27 27 LYS LYS B . n B 2 24 THR 24 28 28 THR THR B . n B 2 25 THR 25 29 29 THR THR B . n B 2 26 ILE 26 30 30 ILE ILE B . n B 2 27 ARG 27 31 31 ARG ARG B . n B 2 28 VAL 28 32 32 VAL VAL B . n B 2 29 SER 29 33 33 SER SER B . n B 2 30 ASN 30 34 34 ASN ASN B . n B 2 31 THR 31 35 35 THR THR B . n B 2 32 GLY 32 36 36 GLY GLY B . n B 2 33 ASP 33 37 37 ASP ASP B . n B 2 34 ARG 34 38 38 ARG ARG B . n B 2 35 PRO 35 39 39 PRO PRO B . n B 2 36 ILE 36 40 40 ILE ILE B . n B 2 37 GLN 37 41 41 GLN GLN B . n B 2 38 VAL 38 42 42 VAL VAL B . n B 2 39 GLY 39 43 43 GLY GLY B . n B 2 40 SER 40 44 44 SER SER B . n B 2 41 HIS 41 45 45 HIS HIS B . n B 2 42 ILE 42 46 46 ILE ILE B . n B 2 43 HIS 43 47 47 HIS HIS B . n B 2 44 PHE 44 48 48 PHE PHE B . n B 2 45 VAL 45 49 49 VAL VAL B . n B 2 46 GLU 46 50 50 GLU GLU B . n B 2 47 VAL 47 51 51 VAL VAL B . n B 2 48 ASN 48 52 52 ASN ASN B . n B 2 49 LYS 49 53 53 LYS LYS B . n B 2 50 GLU 50 54 54 GLU GLU B . n B 2 51 LEU 51 55 55 LEU LEU B . n B 2 52 LEU 52 56 56 LEU LEU B . n B 2 53 PHE 53 57 57 PHE PHE B . n B 2 54 ASP 54 58 58 ASP ASP B . n B 2 55 ARG 55 59 59 ARG ARG B . n B 2 56 ALA 56 60 60 ALA ALA B . n B 2 57 GLU 57 61 61 GLU GLU B . n B 2 58 GLY 58 62 62 GLY GLY B . n B 2 59 ILE 59 63 63 ILE ILE B . n B 2 60 GLY 60 64 64 GLY GLY B . n B 2 61 ARG 61 65 65 ARG ARG B . n B 2 62 ARG 62 66 66 ARG ARG B . n B 2 63 LEU 63 67 67 LEU LEU B . n B 2 64 ASN 64 68 68 ASN ASN B . n B 2 65 ILE 65 69 69 ILE ILE B . n B 2 66 PRO 66 70 70 PRO PRO B . n B 2 67 SER 67 71 71 SER SER B . n B 2 68 GLY 68 72 72 GLY GLY B . n B 2 69 THR 69 73 73 THR THR B . n B 2 70 ALA 70 74 74 ALA ALA B . n B 2 71 ALA 71 75 75 ALA ALA B . n B 2 72 ARG 72 76 76 ARG ARG B . n B 2 73 PHE 73 77 77 PHE PHE B . n B 2 74 GLU 74 78 78 GLU GLU B . n B 2 75 PRO 75 79 79 PRO PRO B . n B 2 76 GLY 76 80 80 GLY GLY B . n B 2 77 GLU 77 81 81 GLU GLU B . n B 2 78 GLU 78 82 82 GLU GLU B . n B 2 79 MET 79 83 83 MET MET B . n B 2 80 GLU 80 84 84 GLU GLU B . n B 2 81 VAL 81 85 85 VAL VAL B . n B 2 82 GLU 82 86 86 GLU GLU B . n B 2 83 LEU 83 87 87 LEU LEU B . n B 2 84 THR 84 88 88 THR THR B . n B 2 85 GLU 85 89 89 GLU GLU B . n B 2 86 LEU 86 90 90 LEU LEU B . n B 2 87 GLY 87 91 91 GLY GLY B . n B 2 88 GLY 88 92 92 GLY GLY B . n B 2 89 ASN 89 93 93 ASN ASN B . n B 2 90 ARG 90 94 94 ARG ARG B . n B 2 91 GLU 91 95 95 GLU GLU B . n B 2 92 VAL 92 96 96 VAL VAL B . n B 2 93 PHE 93 97 97 PHE PHE B . n B 2 94 GLY 94 98 98 GLY GLY B . n B 2 95 ILE 95 99 99 ILE ILE B . n B 2 96 SER 96 100 100 SER SER B . n B 2 97 ASP 97 101 101 ASP ASP B . n B 2 98 LEU 98 102 102 LEU LEU B . n B 2 99 THR 99 103 103 THR THR B . n B 2 100 ASN 100 104 104 ASN ASN B . n B 2 101 GLY 101 105 105 GLY GLY B . n B 2 102 SER 102 106 106 SER SER B . n B 2 103 VAL 103 107 107 VAL VAL B . n B 2 104 ASP 104 108 108 ASP ASP B . n B 2 105 ASN 105 109 109 ASN ASN B . n B 2 106 LYS 106 110 110 LYS LYS B . n B 2 107 GLU 107 111 111 GLU GLU B . n B 2 108 LEU 108 112 112 LEU LEU B . n B 2 109 ILE 109 113 113 ILE ILE B . n B 2 110 LEU 110 114 114 LEU LEU B . n B 2 111 GLN 111 115 115 GLN GLN B . n B 2 112 ARG 112 116 116 ARG ARG B . n B 2 113 ALA 113 117 117 ALA ALA B . n B 2 114 LYS 114 118 118 LYS LYS B . n B 2 115 GLU 115 119 119 GLU GLU B . n B 2 116 LEU 116 120 120 LEU LEU B . n B 2 117 GLY 117 121 121 GLY GLY B . n B 2 118 TYR 118 122 122 TYR TYR B . n B 2 119 LYS 119 123 123 LYS LYS B . n B 2 120 GLY 120 124 124 GLY GLY B . n B 2 121 VAL 121 125 125 VAL VAL B . n B 2 122 GLU 122 126 126 GLU GLU B . n C 3 1 MET 1 1 1 MET MET C . n C 3 2 LYS 2 2 2 LYS LYS C . n C 3 3 ILE 3 3 3 ILE ILE C . n C 3 4 ASN 4 4 4 ASN ASN C . n C 3 5 ARG 5 5 5 ARG ARG C . n C 3 6 GLN 6 6 6 GLN GLN C . n C 3 7 GLN 7 7 7 GLN GLN C . n C 3 8 TYR 8 8 8 TYR TYR C . n C 3 9 ALA 9 9 9 ALA ALA C . n C 3 10 GLU 10 10 10 GLU GLU C . n C 3 11 SER 11 11 11 SER SER C . n C 3 12 TYR 12 12 12 TYR TYR C . n C 3 13 GLY 13 13 13 GLY GLY C . n C 3 14 PRO 14 14 14 PRO PRO C . n C 3 15 THR 15 15 15 THR THR C . n C 3 16 VAL 16 16 16 VAL VAL C . n C 3 17 GLY 17 17 17 GLY GLY C . n C 3 18 ASP 18 18 18 ASP ASP C . n C 3 19 GLN 19 19 19 GLN GLN C . n C 3 20 VAL 20 20 20 VAL VAL C . n C 3 21 ARG 21 21 21 ARG ARG C . n C 3 22 LEU 22 22 22 LEU LEU C . n C 3 23 ALA 23 23 23 ALA ALA C . n C 3 24 ASP 24 24 24 ASP ASP C . n C 3 25 THR 25 25 25 THR THR C . n C 3 26 ASP 26 26 26 ASP ASP C . n C 3 27 LEU 27 27 27 LEU LEU C . n C 3 28 TRP 28 28 28 TRP TRP C . n C 3 29 ILE 29 29 29 ILE ILE C . n C 3 30 GLU 30 30 30 GLU GLU C . n C 3 31 VAL 31 31 31 VAL VAL C . n C 3 32 GLU 32 32 32 GLU GLU C . n C 3 33 LYS 33 33 33 LYS LYS C . n C 3 34 ASP 34 34 34 ASP ASP C . n C 3 35 TYR 35 35 35 TYR TYR C . n C 3 36 THR 36 36 36 THR THR C . n C 3 37 THR 37 37 37 THR THR C . n C 3 38 TYR 38 38 38 TYR TYR C . n C 3 39 GLY 39 39 39 GLY GLY C . n C 3 40 ASP 40 40 40 ASP ASP C . n C 3 41 GLU 41 41 41 GLU GLU C . n C 3 42 ALA 42 42 42 ALA ALA C . n C 3 43 ASN 43 43 43 ASN ASN C . n C 3 44 PHE 44 44 44 PHE PHE C . n C 3 45 GLY 45 45 45 GLY GLY C . n C 3 46 GLY 46 46 46 GLY GLY C . n C 3 47 GLY 47 47 47 GLY GLY C . n C 3 48 LYS 48 48 48 LYS LYS C . n C 3 49 VAL 49 49 49 VAL VAL C . n C 3 50 LEU 50 50 50 LEU LEU C . n C 3 51 ARG 51 51 51 ARG ARG C . n C 3 52 GLU 52 52 52 GLU GLU C . n C 3 53 GLY 53 53 53 GLY GLY C . n C 3 54 MET 54 54 54 MET MET C . n C 3 55 GLY 55 55 55 GLY GLY C . n C 3 56 GLU 56 56 56 GLU GLU C . n C 3 57 ASN 57 57 57 ASN ASN C . n C 3 58 GLY 58 58 58 GLY GLY C . n C 3 59 THR 59 59 59 THR THR C . n C 3 60 TYR 60 60 60 TYR TYR C . n C 3 61 THR 61 61 61 THR THR C . n C 3 62 ARG 62 62 62 ARG ARG C . n C 3 63 THR 63 63 63 THR THR C . n C 3 64 GLU 64 64 64 GLU GLU C . n C 3 65 ASN 65 65 65 ASN ASN C . n C 3 66 VAL 66 66 66 VAL VAL C . n C 3 67 LEU 67 67 67 LEU LEU C . n C 3 68 ASP 68 68 68 ASP ASP C . n C 3 69 LEU 69 69 69 LEU LEU C . n C 3 70 LEU 70 70 70 LEU LEU C . n C 3 71 LEU 71 71 71 LEU LEU C . n C 3 72 THR 72 72 72 THR THR C . n C 3 73 ASN 73 73 73 ASN ASN C . n C 3 74 ALA 74 74 74 ALA ALA C . n C 3 75 LEU 75 75 75 LEU LEU C . n C 3 76 ILE 76 76 76 ILE ILE C . n C 3 77 LEU 77 77 77 LEU LEU C . n C 3 78 ASP 78 78 78 ASP ASP C . n C 3 79 TYR 79 79 79 TYR TYR C . n C 3 80 THR 80 80 80 THR THR C . n C 3 81 GLY 81 81 81 GLY GLY C . n C 3 82 ILE 82 82 82 ILE ILE C . n C 3 83 TYR 83 83 83 TYR TYR C . n C 3 84 LYS 84 84 84 LYS LYS C . n C 3 85 ALA 85 85 85 ALA ALA C . n C 3 86 ASP 86 86 86 ASP ASP C . n C 3 87 ILE 87 87 87 ILE ILE C . n C 3 88 GLY 88 88 88 GLY GLY C . n C 3 89 VAL 89 89 89 VAL VAL C . n C 3 90 LYS 90 90 90 LYS LYS C . n C 3 91 ASP 91 91 91 ASP ASP C . n C 3 92 GLY 92 92 92 GLY GLY C . n C 3 93 TYR 93 93 93 TYR TYR C . n C 3 94 ILE 94 94 94 ILE ILE C . n C 3 95 VAL 95 95 95 VAL VAL C . n C 3 96 GLY 96 96 96 GLY GLY C . n C 3 97 ILE 97 97 97 ILE ILE C . n C 3 98 GLY 98 98 98 GLY GLY C . n C 3 99 LYS 99 99 99 LYS LYS C . n C 3 100 GLY 100 100 100 GLY GLY C . n C 3 101 GLY 101 101 101 GLY GLY C . n C 3 102 ASN 102 102 102 ASN ASN C . n C 3 103 PRO 103 103 103 PRO PRO C . n C 3 104 ASP 104 104 104 ASP ASP C . n C 3 105 ILE 105 105 105 ILE ILE C . n C 3 106 MET 106 106 106 MET MET C . n C 3 107 ASP 107 107 107 ASP ASP C . n C 3 108 GLY 108 108 108 GLY GLY C . n C 3 109 VAL 109 109 109 VAL VAL C . n C 3 110 THR 110 110 110 THR THR C . n C 3 111 PRO 111 111 111 PRO PRO C . n C 3 112 ASN 112 112 112 ASN ASN C . n C 3 113 MET 113 113 113 MET MET C . n C 3 114 ILE 114 114 114 ILE ILE C . n C 3 115 VAL 115 115 115 VAL VAL C . n C 3 116 GLY 116 116 116 GLY GLY C . n C 3 117 THR 117 117 117 THR THR C . n C 3 118 ALA 118 118 118 ALA ALA C . n C 3 119 THR 119 119 119 THR THR C . n C 3 120 GLU 120 120 120 GLU GLU C . n C 3 121 VAL 121 121 121 VAL VAL C . n C 3 122 ILE 122 122 122 ILE ILE C . n C 3 123 ALA 123 123 123 ALA ALA C . n C 3 124 ALA 124 124 124 ALA ALA C . n C 3 125 GLU 125 125 125 GLU GLU C . n C 3 126 GLY 126 126 126 GLY GLY C . n C 3 127 LYS 127 127 127 LYS LYS C . n C 3 128 ILE 128 128 128 ILE ILE C . n C 3 129 VAL 129 129 129 VAL VAL C . n C 3 130 THR 130 130 130 THR THR C . n C 3 131 ALA 131 131 131 ALA ALA C . n C 3 132 GLY 132 132 132 GLY GLY C . n C 3 133 GLY 133 133 133 GLY GLY C . n C 3 134 ILE 134 134 134 ILE ILE C . n C 3 135 ASP 135 135 135 ASP ASP C . n C 3 136 THR 136 136 136 THR THR C . n C 3 137 HIS 137 137 137 HIS HIS C . n C 3 138 VAL 138 138 138 VAL VAL C . n C 3 139 HIS 139 139 139 HIS HIS C . n C 3 140 PHE 140 140 140 PHE PHE C . n C 3 141 ILE 141 141 141 ILE ILE C . n C 3 142 ASN 142 142 142 ASN ASN C . n C 3 143 PRO 143 143 143 PRO PRO C . n C 3 144 ASP 144 144 144 ASP ASP C . n C 3 145 GLN 145 145 145 GLN GLN C . n C 3 146 VAL 146 146 146 VAL VAL C . n C 3 147 ASP 147 147 147 ASP ASP C . n C 3 148 VAL 148 148 148 VAL VAL C . n C 3 149 ALA 149 149 149 ALA ALA C . n C 3 150 LEU 150 150 150 LEU LEU C . n C 3 151 ALA 151 151 151 ALA ALA C . n C 3 152 ASN 152 152 152 ASN ASN C . n C 3 153 GLY 153 153 153 GLY GLY C . n C 3 154 ILE 154 154 154 ILE ILE C . n C 3 155 THR 155 155 155 THR THR C . n C 3 156 THR 156 156 156 THR THR C . n C 3 157 LEU 157 157 157 LEU LEU C . n C 3 158 PHE 158 158 158 PHE PHE C . n C 3 159 GLY 159 159 159 GLY GLY C . n C 3 160 GLY 160 160 160 GLY GLY C . n C 3 161 GLY 161 161 161 GLY GLY C . n C 3 162 THR 162 162 162 THR THR C . n C 3 163 GLY 163 163 163 GLY GLY C . n C 3 164 PRO 164 164 164 PRO PRO C . n C 3 165 ALA 165 165 165 ALA ALA C . n C 3 166 GLU 166 166 166 GLU GLU C . n C 3 167 GLY 167 167 167 GLY GLY C . n C 3 168 SER 168 168 168 SER SER C . n C 3 169 LYS 169 169 169 LYS LYS C . n C 3 170 ALA 170 170 170 ALA ALA C . n C 3 171 THR 171 171 171 THR THR C . n C 3 172 THR 172 172 172 THR THR C . n C 3 173 VAL 173 173 173 VAL VAL C . n C 3 174 THR 174 174 174 THR THR C . n C 3 175 PRO 175 175 175 PRO PRO C . n C 3 176 GLY 176 176 176 GLY GLY C . n C 3 177 PRO 177 177 177 PRO PRO C . n C 3 178 TRP 178 178 178 TRP TRP C . n C 3 179 ASN 179 179 179 ASN ASN C . n C 3 180 ILE 180 180 180 ILE ILE C . n C 3 181 GLU 181 181 181 GLU GLU C . n C 3 182 LYS 182 182 182 LYS LYS C . n C 3 183 MET 183 183 183 MET MET C . n C 3 184 LEU 184 184 184 LEU LEU C . n C 3 185 LYS 185 185 185 LYS LYS C . n C 3 186 SER 186 186 186 SER SER C . n C 3 187 THR 187 187 187 THR THR C . n C 3 188 GLU 188 188 188 GLU GLU C . n C 3 189 GLY 189 189 189 GLY GLY C . n C 3 190 LEU 190 190 190 LEU LEU C . n C 3 191 PRO 191 191 191 PRO PRO C . n C 3 192 ILE 192 192 192 ILE ILE C . n C 3 193 ASN 193 193 193 ASN ASN C . n C 3 194 VAL 194 194 194 VAL VAL C . n C 3 195 GLY 195 195 195 GLY GLY C . n C 3 196 ILE 196 196 196 ILE ILE C . n C 3 197 LEU 197 197 197 LEU LEU C . n C 3 198 GLY 198 198 198 GLY GLY C . n C 3 199 LYS 199 199 199 LYS LYS C . n C 3 200 GLY 200 200 200 GLY GLY C . n C 3 201 HIS 201 201 201 HIS HIS C . n C 3 202 GLY 202 202 202 GLY GLY C . n C 3 203 SER 203 203 203 SER SER C . n C 3 204 SER 204 204 204 SER SER C . n C 3 205 ILE 205 205 205 ILE ILE C . n C 3 206 ALA 206 206 206 ALA ALA C . n C 3 207 PRO 207 207 207 PRO PRO C . n C 3 208 ILE 208 208 208 ILE ILE C . n C 3 209 MET 209 209 209 MET MET C . n C 3 210 GLU 210 210 210 GLU GLU C . n C 3 211 GLN 211 211 211 GLN GLN C . n C 3 212 ILE 212 212 212 ILE ILE C . n C 3 213 ASP 213 213 213 ASP ASP C . n C 3 214 ALA 214 214 214 ALA ALA C . n C 3 215 GLY 215 215 215 GLY GLY C . n C 3 216 ALA 216 216 216 ALA ALA C . n C 3 217 ALA 217 217 217 ALA ALA C . n C 3 218 GLY 218 218 218 GLY GLY C . n C 3 219 LEU 219 219 219 LEU LEU C . n C 3 220 KCX 220 220 220 KCX KCX C . n C 3 221 ILE 221 221 221 ILE ILE C . n C 3 222 HIS 222 222 222 HIS HIS C . n C 3 223 GLU 223 223 223 GLU GLU C . n C 3 224 ASP 224 224 224 ASP ASP C . n C 3 225 TRP 225 225 225 TRP TRP C . n C 3 226 GLY 226 226 226 GLY GLY C . n C 3 227 ALA 227 227 227 ALA ALA C . n C 3 228 THR 228 228 228 THR THR C . n C 3 229 PRO 229 229 229 PRO PRO C . n C 3 230 ALA 230 230 230 ALA ALA C . n C 3 231 SER 231 231 231 SER SER C . n C 3 232 ILE 232 232 232 ILE ILE C . n C 3 233 ASP 233 233 233 ASP ASP C . n C 3 234 ARG 234 234 234 ARG ARG C . n C 3 235 SER 235 235 235 SER SER C . n C 3 236 LEU 236 236 236 LEU LEU C . n C 3 237 THR 237 237 237 THR THR C . n C 3 238 VAL 238 238 238 VAL VAL C . n C 3 239 ALA 239 239 239 ALA ALA C . n C 3 240 ASP 240 240 240 ASP ASP C . n C 3 241 GLU 241 241 241 GLU GLU C . n C 3 242 ALA 242 242 242 ALA ALA C . n C 3 243 ASP 243 243 243 ASP ASP C . n C 3 244 VAL 244 244 244 VAL VAL C . n C 3 245 GLN 245 245 245 GLN GLN C . n C 3 246 VAL 246 246 246 VAL VAL C . n C 3 247 ALA 247 247 247 ALA ALA C . n C 3 248 ILE 248 248 248 ILE ILE C . n C 3 249 HIS 249 249 249 HIS HIS C . n C 3 250 SER 250 250 250 SER SER C . n C 3 251 ASP 251 251 251 ASP ASP C . n C 3 252 THR 252 252 252 THR THR C . n C 3 253 LEU 253 253 253 LEU LEU C . n C 3 254 ASN 254 254 254 ASN ASN C . n C 3 255 GLU 255 255 255 GLU GLU C . n C 3 256 ALA 256 256 256 ALA ALA C . n C 3 257 GLY 257 257 257 GLY GLY C . n C 3 258 PHE 258 258 258 PHE PHE C . n C 3 259 LEU 259 259 259 LEU LEU C . n C 3 260 GLU 260 260 260 GLU GLU C . n C 3 261 ASP 261 261 261 ASP ASP C . n C 3 262 THR 262 262 262 THR THR C . n C 3 263 LEU 263 263 263 LEU LEU C . n C 3 264 ARG 264 264 264 ARG ARG C . n C 3 265 ALA 265 265 265 ALA ALA C . n C 3 266 ILE 266 266 266 ILE ILE C . n C 3 267 ASN 267 267 267 ASN ASN C . n C 3 268 GLY 268 268 268 GLY GLY C . n C 3 269 ARG 269 269 269 ARG ARG C . n C 3 270 VAL 270 270 270 VAL VAL C . n C 3 271 ILE 271 271 271 ILE ILE C . n C 3 272 HIS 272 272 272 HIS HIS C . n C 3 273 SER 273 273 273 SER SER C . n C 3 274 PHE 274 274 274 PHE PHE C . n C 3 275 HIS 275 275 275 HIS HIS C . n C 3 276 VAL 276 276 276 VAL VAL C . n C 3 277 GLU 277 277 277 GLU GLU C . n C 3 278 GLY 278 278 278 GLY GLY C . n C 3 279 ALA 279 279 279 ALA ALA C . n C 3 280 GLY 280 280 280 GLY GLY C . n C 3 281 GLY 281 281 281 GLY GLY C . n C 3 282 GLY 282 282 282 GLY GLY C . n C 3 283 HIS 283 283 283 HIS HIS C . n C 3 284 ALA 284 284 284 ALA ALA C . n C 3 285 PRO 285 285 285 PRO PRO C . n C 3 286 ASP 286 286 286 ASP ASP C . n C 3 287 ILE 287 287 287 ILE ILE C . n C 3 288 MET 288 288 288 MET MET C . n C 3 289 ALA 289 289 289 ALA ALA C . n C 3 290 MET 290 290 290 MET MET C . n C 3 291 ALA 291 291 291 ALA ALA C . n C 3 292 GLY 292 292 292 GLY GLY C . n C 3 293 HIS 293 293 293 HIS HIS C . n C 3 294 PRO 294 294 294 PRO PRO C . n C 3 295 ASN 295 295 295 ASN ASN C . n C 3 296 VAL 296 296 296 VAL VAL C . n C 3 297 LEU 297 297 297 LEU LEU C . n C 3 298 PRO 298 298 298 PRO PRO C . n C 3 299 SER 299 299 299 SER SER C . n C 3 300 SER 300 300 300 SER SER C . n C 3 301 THR 301 301 301 THR THR C . n C 3 302 ASN 302 302 302 ASN ASN C . n C 3 303 PRO 303 303 303 PRO PRO C . n C 3 304 THR 304 304 304 THR THR C . n C 3 305 ARG 305 305 305 ARG ARG C . n C 3 306 PRO 306 306 306 PRO PRO C . n C 3 307 PHE 307 307 307 PHE PHE C . n C 3 308 THR 308 308 308 THR THR C . n C 3 309 VAL 309 309 309 VAL VAL C . n C 3 310 ASN 310 310 310 ASN ASN C . n C 3 311 THR 311 311 311 THR THR C . n C 3 312 ILE 312 312 312 ILE ILE C . n C 3 313 ASP 313 313 313 ASP ASP C . n C 3 314 GLU 314 314 314 GLU GLU C . n C 3 315 HIS 315 315 315 HIS HIS C . n C 3 316 LEU 316 316 316 LEU LEU C . n C 3 317 ASP 317 317 317 ASP ASP C . n C 3 318 MET 318 318 318 MET MET C . n C 3 319 LEU 319 319 319 LEU LEU C . n C 3 320 MET 320 320 320 MET MET C . n C 3 321 VAL 321 321 321 VAL VAL C . n C 3 322 CYS 322 322 322 CYS CYS C . n C 3 323 HIS 323 323 323 HIS HIS C . n C 3 324 HIS 324 324 324 HIS HIS C . n C 3 325 LEU 325 325 325 LEU LEU C . n C 3 326 LYS 326 326 326 LYS LYS C . n C 3 327 GLN 327 327 327 GLN GLN C . n C 3 328 ASN 328 328 328 ASN ASN C . n C 3 329 ILE 329 329 329 ILE ILE C . n C 3 330 PRO 330 330 330 PRO PRO C . n C 3 331 GLU 331 331 331 GLU GLU C . n C 3 332 ASP 332 332 332 ASP ASP C . n C 3 333 VAL 333 333 333 VAL VAL C . n C 3 334 ALA 334 334 334 ALA ALA C . n C 3 335 PHE 335 335 335 PHE PHE C . n C 3 336 ALA 336 336 336 ALA ALA C . n C 3 337 ASP 337 337 337 ASP ASP C . n C 3 338 SER 338 338 338 SER SER C . n C 3 339 ARG 339 339 339 ARG ARG C . n C 3 340 ILE 340 340 340 ILE ILE C . n C 3 341 ARG 341 341 341 ARG ARG C . n C 3 342 PRO 342 342 342 PRO PRO C . n C 3 343 GLU 343 343 343 GLU GLU C . n C 3 344 THR 344 344 344 THR THR C . n C 3 345 ILE 345 345 345 ILE ILE C . n C 3 346 ALA 346 346 346 ALA ALA C . n C 3 347 ALA 347 347 347 ALA ALA C . n C 3 348 GLU 348 348 348 GLU GLU C . n C 3 349 ASP 349 349 349 ASP ASP C . n C 3 350 ILE 350 350 350 ILE ILE C . n C 3 351 LEU 351 351 351 LEU LEU C . n C 3 352 HIS 352 352 352 HIS HIS C . n C 3 353 ASP 353 353 353 ASP ASP C . n C 3 354 LEU 354 354 354 LEU LEU C . n C 3 355 GLY 355 355 355 GLY GLY C . n C 3 356 ILE 356 356 356 ILE ILE C . n C 3 357 ILE 357 357 357 ILE ILE C . n C 3 358 SER 358 358 358 SER SER C . n C 3 359 MET 359 359 359 MET MET C . n C 3 360 MET 360 360 360 MET MET C . n C 3 361 SER 361 361 361 SER SER C . n C 3 362 THR 362 362 362 THR THR C . n C 3 363 ASP 363 363 363 ASP ASP C . n C 3 364 ALA 364 364 364 ALA ALA C . n C 3 365 LEU 365 365 365 LEU LEU C . n C 3 366 ALA 366 366 366 ALA ALA C . n C 3 367 MET 367 367 367 MET MET C . n C 3 368 GLY 368 368 368 GLY GLY C . n C 3 369 ARG 369 369 369 ARG ARG C . n C 3 370 ALA 370 370 370 ALA ALA C . n C 3 371 GLY 371 371 371 GLY GLY C . n C 3 372 GLU 372 372 372 GLU GLU C . n C 3 373 MET 373 373 373 MET MET C . n C 3 374 VAL 374 374 374 VAL VAL C . n C 3 375 LEU 375 375 375 LEU LEU C . n C 3 376 ARG 376 376 376 ARG ARG C . n C 3 377 THR 377 377 377 THR THR C . n C 3 378 TRP 378 378 378 TRP TRP C . n C 3 379 GLN 379 379 379 GLN GLN C . n C 3 380 THR 380 380 380 THR THR C . n C 3 381 ALA 381 381 381 ALA ALA C . n C 3 382 ASP 382 382 382 ASP ASP C . n C 3 383 LYS 383 383 383 LYS LYS C . n C 3 384 MET 384 384 384 MET MET C . n C 3 385 LYS 385 385 385 LYS LYS C . n C 3 386 LYS 386 386 386 LYS LYS C . n C 3 387 GLN 387 387 387 GLN GLN C . n C 3 388 ARG 388 388 388 ARG ARG C . n C 3 389 GLY 389 389 389 GLY GLY C . n C 3 390 PRO 390 390 390 PRO PRO C . n C 3 391 LEU 391 391 391 LEU LEU C . n C 3 392 ALA 392 392 392 ALA ALA C . n C 3 393 GLU 393 393 393 GLU GLU C . n C 3 394 GLU 394 394 394 GLU GLU C . n C 3 395 LYS 395 395 395 LYS LYS C . n C 3 396 ASN 396 396 396 ASN ASN C . n C 3 397 GLY 397 397 397 GLY GLY C . n C 3 398 SER 398 398 398 SER SER C . n C 3 399 ASP 399 399 399 ASP ASP C . n C 3 400 ASN 400 400 400 ASN ASN C . n C 3 401 PHE 401 401 401 PHE PHE C . n C 3 402 ARG 402 402 402 ARG ARG C . n C 3 403 ALA 403 403 403 ALA ALA C . n C 3 404 LYS 404 404 404 LYS LYS C . n C 3 405 ARG 405 405 405 ARG ARG C . n C 3 406 TYR 406 406 406 TYR TYR C . n C 3 407 VAL 407 407 407 VAL VAL C . n C 3 408 SER 408 408 408 SER SER C . n C 3 409 LYS 409 409 409 LYS LYS C . n C 3 410 TYR 410 410 410 TYR TYR C . n C 3 411 THR 411 411 411 THR THR C . n C 3 412 ILE 412 412 412 ILE ILE C . n C 3 413 ASN 413 413 413 ASN ASN C . n C 3 414 PRO 414 414 414 PRO PRO C . n C 3 415 ALA 415 415 415 ALA ALA C . n C 3 416 ILE 416 416 416 ILE ILE C . n C 3 417 ALA 417 417 417 ALA ALA C . n C 3 418 GLN 418 418 418 GLN GLN C . n C 3 419 GLY 419 419 419 GLY GLY C . n C 3 420 ILE 420 420 420 ILE ILE C . n C 3 421 ALA 421 421 421 ALA ALA C . n C 3 422 HIS 422 422 422 HIS HIS C . n C 3 423 GLU 423 423 423 GLU GLU C . n C 3 424 VAL 424 424 424 VAL VAL C . n C 3 425 GLY 425 425 425 GLY GLY C . n C 3 426 SER 426 426 426 SER SER C . n C 3 427 ILE 427 427 427 ILE ILE C . n C 3 428 GLU 428 428 428 GLU GLU C . n C 3 429 GLU 429 429 429 GLU GLU C . n C 3 430 GLY 430 430 430 GLY GLY C . n C 3 431 LYS 431 431 431 LYS LYS C . n C 3 432 PHE 432 432 432 PHE PHE C . n C 3 433 ALA 433 433 433 ALA ALA C . n C 3 434 ASP 434 434 434 ASP ASP C . n C 3 435 LEU 435 435 435 LEU LEU C . n C 3 436 VAL 436 436 436 VAL VAL C . n C 3 437 LEU 437 437 437 LEU LEU C . n C 3 438 TRP 438 438 438 TRP TRP C . n C 3 439 GLU 439 439 439 GLU GLU C . n C 3 440 PRO 440 440 440 PRO PRO C . n C 3 441 LYS 441 441 441 LYS LYS C . n C 3 442 PHE 442 442 442 PHE PHE C . n C 3 443 PHE 443 443 443 PHE PHE C . n C 3 444 GLY 444 444 444 GLY GLY C . n C 3 445 VAL 445 445 445 VAL VAL C . n C 3 446 LYS 446 446 446 LYS LYS C . n C 3 447 ALA 447 447 447 ALA ALA C . n C 3 448 ASP 448 448 448 ASP ASP C . n C 3 449 ARG 449 449 449 ARG ARG C . n C 3 450 VAL 450 450 450 VAL VAL C . n C 3 451 ILE 451 451 451 ILE ILE C . n C 3 452 LYS 452 452 452 LYS LYS C . n C 3 453 GLY 453 453 453 GLY GLY C . n C 3 454 GLY 454 454 454 GLY GLY C . n C 3 455 ILE 455 455 455 ILE ILE C . n C 3 456 ILE 456 456 456 ILE ILE C . n C 3 457 ALA 457 457 457 ALA ALA C . n C 3 458 TYR 458 458 458 TYR TYR C . n C 3 459 ALA 459 459 459 ALA ALA C . n C 3 460 GLN 460 460 460 GLN GLN C . n C 3 461 ILE 461 461 461 ILE ILE C . n C 3 462 GLY 462 462 462 GLY GLY C . n C 3 463 ASP 463 463 463 ASP ASP C . n C 3 464 PRO 464 464 464 PRO PRO C . n C 3 465 SER 465 465 465 SER SER C . n C 3 466 ALA 466 466 466 ALA ALA C . n C 3 467 SER 467 467 467 SER SER C . n C 3 468 ILE 468 468 468 ILE ILE C . n C 3 469 PRO 469 469 469 PRO PRO C . n C 3 470 THR 470 470 470 THR THR C . n C 3 471 PRO 471 471 471 PRO PRO C . n C 3 472 GLN 472 472 472 GLN GLN C . n C 3 473 PRO 473 473 473 PRO PRO C . n C 3 474 VAL 474 474 474 VAL VAL C . n C 3 475 MET 475 475 475 MET MET C . n C 3 476 GLY 476 476 476 GLY GLY C . n C 3 477 ARG 477 477 477 ARG ARG C . n C 3 478 ARG 478 478 478 ARG ARG C . n C 3 479 MET 479 479 479 MET MET C . n C 3 480 TYR 480 480 480 TYR TYR C . n C 3 481 GLY 481 481 481 GLY GLY C . n C 3 482 THR 482 482 482 THR THR C . n C 3 483 VAL 483 483 483 VAL VAL C . n C 3 484 GLY 484 484 484 GLY GLY C . n C 3 485 ASP 485 485 485 ASP ASP C . n C 3 486 LEU 486 486 486 LEU LEU C . n C 3 487 ILE 487 487 487 ILE ILE C . n C 3 488 HIS 488 488 488 HIS HIS C . n C 3 489 ASP 489 489 489 ASP ASP C . n C 3 490 THR 490 490 490 THR THR C . n C 3 491 ASN 491 491 491 ASN ASN C . n C 3 492 ILE 492 492 492 ILE ILE C . n C 3 493 THR 493 493 493 THR THR C . n C 3 494 PHE 494 494 494 PHE PHE C . n C 3 495 MET 495 495 495 MET MET C . n C 3 496 SER 496 496 496 SER SER C . n C 3 497 LYS 497 497 497 LYS LYS C . n C 3 498 SER 498 498 498 SER SER C . n C 3 499 SER 499 499 499 SER SER C . n C 3 500 ILE 500 500 500 ILE ILE C . n C 3 501 GLN 501 501 501 GLN GLN C . n C 3 502 GLN 502 502 502 GLN GLN C . n C 3 503 GLY 503 503 503 GLY GLY C . n C 3 504 VAL 504 504 504 VAL VAL C . n C 3 505 PRO 505 505 505 PRO PRO C . n C 3 506 ALA 506 506 506 ALA ALA C . n C 3 507 LYS 507 507 507 LYS LYS C . n C 3 508 LEU 508 508 508 LEU LEU C . n C 3 509 GLY 509 509 509 GLY GLY C . n C 3 510 LEU 510 510 510 LEU LEU C . n C 3 511 LYS 511 511 511 LYS LYS C . n C 3 512 ARG 512 512 512 ARG ARG C . n C 3 513 ARG 513 513 513 ARG ARG C . n C 3 514 ILE 514 514 514 ILE ILE C . n C 3 515 GLY 515 515 515 GLY GLY C . n C 3 516 THR 516 516 516 THR THR C . n C 3 517 VAL 517 517 517 VAL VAL C . n C 3 518 LYS 518 518 518 LYS LYS C . n C 3 519 ASN 519 519 519 ASN ASN C . n C 3 520 CYS 520 520 520 CYS CYS C . n C 3 521 ARG 521 521 521 ARG ARG C . n C 3 522 ASN 522 522 522 ASN ASN C . n C 3 523 ILE 523 523 523 ILE ILE C . n C 3 524 GLY 524 524 524 GLY GLY C . n C 3 525 LYS 525 525 525 LYS LYS C . n C 3 526 LYS 526 526 526 LYS LYS C . n C 3 527 ASP 527 527 527 ASP ASP C . n C 3 528 MET 528 528 528 MET MET C . n C 3 529 LYS 529 529 529 LYS LYS C . n C 3 530 TRP 530 530 530 TRP TRP C . n C 3 531 ASN 531 531 531 ASN ASN C . n C 3 532 ASP 532 532 532 ASP ASP C . n C 3 533 VAL 533 533 533 VAL VAL C . n C 3 534 THR 534 534 534 THR THR C . n C 3 535 THR 535 535 535 THR THR C . n C 3 536 ASP 536 536 536 ASP ASP C . n C 3 537 ILE 537 537 537 ILE ILE C . n C 3 538 ASP 538 538 538 ASP ASP C . n C 3 539 ILE 539 539 539 ILE ILE C . n C 3 540 ASN 540 540 540 ASN ASN C . n C 3 541 PRO 541 541 541 PRO PRO C . n C 3 542 GLU 542 542 542 GLU GLU C . n C 3 543 THR 543 543 543 THR THR C . n C 3 544 TYR 544 544 544 TYR TYR C . n C 3 545 GLU 545 545 545 GLU GLU C . n C 3 546 VAL 546 546 546 VAL VAL C . n C 3 547 LYS 547 547 547 LYS LYS C . n C 3 548 VAL 548 548 548 VAL VAL C . n C 3 549 ASP 549 549 549 ASP ASP C . n C 3 550 GLY 550 550 550 GLY GLY C . n C 3 551 GLU 551 551 551 GLU GLU C . n C 3 552 VAL 552 552 552 VAL VAL C . n C 3 553 LEU 553 553 553 LEU LEU C . n C 3 554 THR 554 554 554 THR THR C . n C 3 555 CYS 555 555 555 CYS CYS C . n C 3 556 GLU 556 556 556 GLU GLU C . n C 3 557 PRO 557 557 557 PRO PRO C . n C 3 558 VAL 558 558 558 VAL VAL C . n C 3 559 LYS 559 559 559 LYS LYS C . n C 3 560 GLU 560 560 560 GLU GLU C . n C 3 561 LEU 561 561 561 LEU LEU C . n C 3 562 PRO 562 562 562 PRO PRO C . n C 3 563 MET 563 563 563 MET MET C . n C 3 564 ALA 564 564 564 ALA ALA C . n C 3 565 GLN 565 565 565 GLN GLN C . n C 3 566 ARG 566 566 566 ARG ARG C . n C 3 567 TYR 567 567 567 TYR TYR C . n C 3 568 PHE 568 568 568 PHE PHE C . n C 3 569 LEU 569 569 569 LEU LEU C . n C 3 570 PHE 570 570 570 PHE PHE C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NI 1 601 601 NI NI C . E 4 NI 1 602 602 NI NI C . F 5 2PA 1 603 617 2PA 2PA C . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9GNR _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9GNR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9GNR _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9GNR _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 6156 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.560 ? 8334 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 5.514 ? 853 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.045 ? 941 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 1100 ? f_plane_restr ? ? # _struct.entry_id 9GNR _struct.title 'Cryo-EM structure of Sporosarcina pasteurii urease inhibited by NBPTO' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9GNR _struct_keywords.text 'urease, urea, nickel, NBPTO, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP URE3_SPOPA P41022 ? 1 ;MHLNPAEKEKLQIFLASELLLRRKARGLKLNYPEAVAIITSFIMEGARDGKTVAMLMEEGKHVLTRDDVMEGVPEMIDDI QAEATFPDGTKLVTVHNPIS ; 1 2 UNP URE2_SPOPA P41021 ? 2 ;NYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEME VELTELGGNREVFGISDLTNGSVDNKELILQRAKELGYKGVE ; 5 3 UNP URE1_SPOPA P41020 ? 3 ;MKINRQQYAESYGPTVGDQVRLADTDLWIEVEKDTTYGDEAVNFGGGKVLREGMGENGTYTRTENVLDLLLTNALILDYT GIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQVDVALANGITTLFGG GTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHGSSIAPIMEQIDAGAAGLKIHEDWGATPASIDRSLTVAD EADVQVAIHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLM VCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRTWQTADKMKKQRGPLAEEKNGSDN FRAKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFFGVKADRVIKGGIIAYAQIGDPSASIPTPQPVMGRRMY GTVGDLIHDTNITFMSKSSIQQGVPAKLGLKRRIGTVKNCRNIGKKDMKWNDVTTDIDINPETYEVKVDGEVLTCEPVKE LPMAQRYFLF ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9GNR A 1 ? 100 ? P41022 1 ? 100 ? 1 100 2 2 9GNR B 1 ? 122 ? P41021 5 ? 126 ? 5 126 3 3 9GNR C 1 ? 570 ? P41020 1 ? 570 ? 1 570 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9GNR ALA A 20 ? UNP P41022 LEU 20 variant 20 1 1 9GNR LYS A 22 ? UNP P41022 ARG 22 variant 22 2 3 9GNR TYR C 35 ? UNP P41020 ? ? insertion 35 3 3 9GNR ? C ? ? UNP P41020 VAL 42 deletion ? 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 4 ? ARG A 26 ? ASN A 4 ARG A 26 1 ? 23 HELX_P HELX_P2 AA2 ASN A 31 ? GLY A 50 ? ASN A 31 GLY A 50 1 ? 20 HELX_P HELX_P3 AA3 THR A 52 ? GLY A 60 ? THR A 52 GLY A 60 1 ? 9 HELX_P HELX_P4 AA4 THR A 65 ? VAL A 69 ? THR A 65 VAL A 69 5 ? 5 HELX_P HELX_P5 AA5 GLY A 72 ? ILE A 77 ? GLY A 72 ILE A 77 1 ? 6 HELX_P HELX_P6 AA6 HIS B 43 ? VAL B 47 ? HIS B 47 VAL B 51 5 ? 5 HELX_P HELX_P7 AA7 ASP B 54 ? ILE B 59 ? ASP B 58 ILE B 63 5 ? 6 HELX_P HELX_P8 AA8 ASN B 105 ? LEU B 116 ? ASN B 109 LEU B 120 1 ? 12 HELX_P HELX_P9 AA9 ARG C 5 ? TYR C 12 ? ARG C 5 TYR C 12 1 ? 8 HELX_P HELX_P10 AB1 ASP C 144 ? ALA C 151 ? ASP C 144 ALA C 151 1 ? 8 HELX_P HELX_P11 AB2 ALA C 165 ? THR C 171 ? ALA C 165 THR C 171 1 ? 7 HELX_P HELX_P12 AB3 GLY C 176 ? THR C 187 ? GLY C 176 THR C 187 1 ? 12 HELX_P HELX_P13 AB4 GLU C 188 ? LEU C 190 ? GLU C 188 LEU C 190 5 ? 3 HELX_P HELX_P14 AB5 SER C 204 ? GLY C 215 ? SER C 204 GLY C 215 1 ? 12 HELX_P HELX_P15 AB6 THR C 228 ? ASP C 243 ? THR C 228 ASP C 243 1 ? 16 HELX_P HELX_P16 AB7 PHE C 258 ? ASN C 267 ? PHE C 258 ASN C 267 1 ? 10 HELX_P HELX_P17 AB8 ASP C 286 ? HIS C 293 ? ASP C 286 HIS C 293 5 ? 8 HELX_P HELX_P18 AB9 THR C 308 ? MET C 318 ? THR C 308 MET C 318 1 ? 11 HELX_P HELX_P19 AC1 LEU C 319 ? CYS C 322 ? LEU C 319 CYS C 322 5 ? 4 HELX_P HELX_P20 AC2 ILE C 329 ? ILE C 340 ? ILE C 329 ILE C 340 1 ? 12 HELX_P HELX_P21 AC3 ARG C 341 ? LEU C 354 ? ARG C 341 LEU C 354 1 ? 14 HELX_P HELX_P22 AC4 GLU C 372 ? GLY C 389 ? GLU C 372 GLY C 389 1 ? 18 HELX_P HELX_P23 AC5 ASP C 399 ? SER C 408 ? ASP C 399 SER C 408 1 ? 10 HELX_P HELX_P24 AC6 ILE C 412 ? GLN C 418 ? ILE C 412 GLN C 418 1 ? 7 HELX_P HELX_P25 AC7 TYR C 480 ? GLY C 484 ? TYR C 480 GLY C 484 5 ? 5 HELX_P HELX_P26 AC8 ASP C 485 ? THR C 490 ? ASP C 485 THR C 490 1 ? 6 HELX_P HELX_P27 AC9 SER C 496 ? GLY C 503 ? SER C 496 GLY C 503 1 ? 8 HELX_P HELX_P28 AD1 GLY C 503 ? GLY C 509 ? GLY C 503 GLY C 509 1 ? 7 HELX_P HELX_P29 AD2 GLY C 524 ? MET C 528 ? GLY C 524 MET C 528 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A CXM 1 C ? ? ? 1_555 A HIS 2 N ? ? A CXM 1 A HIS 2 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? C LEU 219 C ? ? ? 1_555 C KCX 220 N ? ? C LEU 219 C KCX 220 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? C KCX 220 C ? ? ? 1_555 C ILE 221 N ? ? C KCX 220 C ILE 221 1_555 ? ? ? ? ? ? ? 1.329 ? ? metalc1 metalc ? ? C HIS 137 NE2 ? ? ? 1_555 E NI . NI ? ? C HIS 137 C NI 602 1_555 ? ? ? ? ? ? ? 2.016 ? ? metalc2 metalc ? ? C HIS 139 NE2 ? ? ? 1_555 E NI . NI ? ? C HIS 139 C NI 602 1_555 ? ? ? ? ? ? ? 1.959 ? ? metalc3 metalc ? ? C KCX 220 OQ1 ? ? ? 1_555 D NI . NI ? ? C KCX 220 C NI 601 1_555 ? ? ? ? ? ? ? 1.955 ? ? metalc4 metalc ? ? C KCX 220 OQ2 ? ? ? 1_555 E NI . NI ? ? C KCX 220 C NI 602 1_555 ? ? ? ? ? ? ? 1.988 ? ? metalc5 metalc ? ? C HIS 249 ND1 ? ? ? 1_555 D NI . NI ? ? C HIS 249 C NI 601 1_555 ? ? ? ? ? ? ? 2.006 ? ? metalc6 metalc ? ? C HIS 275 NE2 ? ? ? 1_555 D NI . NI ? ? C HIS 275 C NI 601 1_555 ? ? ? ? ? ? ? 1.956 ? ? metalc7 metalc ? ? C ASP 363 OD1 ? ? ? 1_555 E NI . NI ? ? C ASP 363 C NI 602 1_555 ? ? ? ? ? ? ? 2.110 ? ? metalc8 metalc ? ? D NI . NI ? ? ? 1_555 F 2PA . O1 ? ? C NI 601 C 2PA 603 1_555 ? ? ? ? ? ? ? 2.005 ? ? metalc9 metalc ? ? D NI . NI ? ? ? 1_555 F 2PA . O3 ? ? C NI 601 C 2PA 603 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc10 metalc ? ? E NI . NI ? ? ? 1_555 F 2PA . N4 ? ? C NI 602 C 2PA 603 1_555 ? ? ? ? ? ? ? 2.030 ? ? metalc11 metalc ? ? E NI . NI ? ? ? 1_555 F 2PA . O3 ? ? C NI 602 C 2PA 603 1_555 ? ? ? ? ? ? ? 2.065 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? C HIS 137 ? C HIS 137 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 NE2 ? C HIS 139 ? C HIS 139 ? 1_555 107.6 ? 2 NE2 ? C HIS 137 ? C HIS 137 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 OQ2 ? C KCX 220 ? C KCX 220 ? 1_555 81.0 ? 3 NE2 ? C HIS 139 ? C HIS 139 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 OQ2 ? C KCX 220 ? C KCX 220 ? 1_555 90.6 ? 4 NE2 ? C HIS 137 ? C HIS 137 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 OD1 ? C ASP 363 ? C ASP 363 ? 1_555 96.0 ? 5 NE2 ? C HIS 139 ? C HIS 139 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 OD1 ? C ASP 363 ? C ASP 363 ? 1_555 82.2 ? 6 OQ2 ? C KCX 220 ? C KCX 220 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 OD1 ? C ASP 363 ? C ASP 363 ? 1_555 171.0 ? 7 NE2 ? C HIS 137 ? C HIS 137 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 N4 ? F 2PA . ? C 2PA 603 ? 1_555 168.7 ? 8 NE2 ? C HIS 139 ? C HIS 139 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 N4 ? F 2PA . ? C 2PA 603 ? 1_555 81.3 ? 9 OQ2 ? C KCX 220 ? C KCX 220 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 N4 ? F 2PA . ? C 2PA 603 ? 1_555 92.3 ? 10 OD1 ? C ASP 363 ? C ASP 363 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 N4 ? F 2PA . ? C 2PA 603 ? 1_555 92.0 ? 11 NE2 ? C HIS 137 ? C HIS 137 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 O3 ? F 2PA . ? C 2PA 603 ? 1_555 92.3 ? 12 NE2 ? C HIS 139 ? C HIS 139 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 O3 ? F 2PA . ? C 2PA 603 ? 1_555 160.0 ? 13 OQ2 ? C KCX 220 ? C KCX 220 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 O3 ? F 2PA . ? C 2PA 603 ? 1_555 94.8 ? 14 OD1 ? C ASP 363 ? C ASP 363 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 O3 ? F 2PA . ? C 2PA 603 ? 1_555 93.8 ? 15 N4 ? F 2PA . ? C 2PA 603 ? 1_555 NI ? E NI . ? C NI 602 ? 1_555 O3 ? F 2PA . ? C 2PA 603 ? 1_555 79.2 ? 16 OQ1 ? C KCX 220 ? C KCX 220 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 ND1 ? C HIS 249 ? C HIS 249 ? 1_555 105.2 ? 17 OQ1 ? C KCX 220 ? C KCX 220 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 NE2 ? C HIS 275 ? C HIS 275 ? 1_555 104.8 ? 18 ND1 ? C HIS 249 ? C HIS 249 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 NE2 ? C HIS 275 ? C HIS 275 ? 1_555 95.3 ? 19 OQ1 ? C KCX 220 ? C KCX 220 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 O1 ? F 2PA . ? C 2PA 603 ? 1_555 107.3 ? 20 ND1 ? C HIS 249 ? C HIS 249 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 O1 ? F 2PA . ? C 2PA 603 ? 1_555 85.4 ? 21 NE2 ? C HIS 275 ? C HIS 275 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 O1 ? F 2PA . ? C 2PA 603 ? 1_555 146.5 ? 22 OQ1 ? C KCX 220 ? C KCX 220 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 O3 ? F 2PA . ? C 2PA 603 ? 1_555 94.6 ? 23 ND1 ? C HIS 249 ? C HIS 249 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 O3 ? F 2PA . ? C 2PA 603 ? 1_555 157.3 ? 24 NE2 ? C HIS 275 ? C HIS 275 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 O3 ? F 2PA . ? C 2PA 603 ? 1_555 89.9 ? 25 O1 ? F 2PA . ? C 2PA 603 ? 1_555 NI ? D NI . ? C NI 601 ? 1_555 O3 ? F 2PA . ? C 2PA 603 ? 1_555 78.3 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CXM A 1 ? . . . . CXM A 1 ? 1_555 . . . . . . . MET 1 CXM Carboxylation 'Named protein modification' 2 KCX C 220 ? . . . . KCX C 220 ? 1_555 . . . . . . . LYS 1 KCX Carboxylation 'Named protein modification' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 284 C . ? ALA 284 C PRO 285 C ? PRO 285 C 1 -3.47 2 ARG 305 C . ? ARG 305 C PRO 306 C ? PRO 306 C 1 -6.20 3 GLN 472 C . ? GLN 472 C PRO 473 C ? PRO 473 C 1 4.98 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 4 ? AA8 ? 8 ? AA9 ? 7 ? AB1 ? 5 ? AB2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? parallel AA8 4 5 ? anti-parallel AA8 5 6 ? anti-parallel AA8 6 7 ? anti-parallel AA8 7 8 ? anti-parallel AA9 1 2 ? parallel AA9 2 3 ? parallel AA9 3 4 ? parallel AA9 4 5 ? parallel AA9 5 6 ? parallel AA9 6 7 ? parallel AB1 1 2 ? parallel AB1 2 3 ? parallel AB1 3 4 ? parallel AB1 4 5 ? parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASP A 79 ? PHE A 86 ? ASP A 79 PHE A 86 AA1 2 GLY A 89 ? HIS A 96 ? GLY A 89 HIS A 96 AA2 1 TYR B 8 ? ARG B 9 ? TYR B 12 ARG B 13 AA2 2 GLN C 19 ? ARG C 21 ? GLN C 19 ARG C 21 AA2 3 TRP C 28 ? GLU C 30 ? TRP C 28 GLU C 30 AA3 1 GLU B 14 ? GLU B 16 ? GLU B 18 GLU B 20 AA3 2 LYS C 2 ? ASN C 4 ? LYS C 2 ASN C 4 AA4 1 LEU B 51 ? LEU B 52 ? LEU B 55 LEU B 56 AA4 2 LYS B 23 ? ASN B 30 ? LYS B 27 ASN B 34 AA4 3 GLU B 78 ? GLU B 85 ? GLU B 82 GLU B 89 AA4 4 ARG B 61 ? LEU B 63 ? ARG B 65 LEU B 67 AA5 1 ILE B 36 ? GLY B 39 ? ILE B 40 GLY B 43 AA5 2 ALA B 70 ? PHE B 73 ? ALA B 74 PHE B 77 AA6 1 GLU B 91 ? VAL B 92 ? GLU B 95 VAL B 96 AA6 2 GLY B 101 ? SER B 102 ? GLY B 105 SER B 106 AA7 1 TYR C 93 ? GLY C 98 ? TYR C 93 GLY C 98 AA7 2 ILE C 82 ? LYS C 90 ? ILE C 82 LYS C 90 AA7 3 LEU C 69 ? LEU C 77 ? LEU C 69 LEU C 77 AA7 4 VAL C 121 ? ALA C 123 ? VAL C 121 ALA C 123 AA8 1 TYR C 93 ? GLY C 98 ? TYR C 93 GLY C 98 AA8 2 ILE C 82 ? LYS C 90 ? ILE C 82 LYS C 90 AA8 3 LEU C 69 ? LEU C 77 ? LEU C 69 LEU C 77 AA8 4 ILE C 128 ? ALA C 131 ? ILE C 128 ALA C 131 AA8 5 ASP C 434 ? TRP C 438 ? ASP C 434 TRP C 438 AA8 6 ARG C 449 ? LYS C 452 ? ARG C 449 LYS C 452 AA8 7 ILE C 455 ? ILE C 461 ? ILE C 455 ILE C 461 AA8 8 MET C 475 ? ARG C 478 ? MET C 475 ARG C 478 AA9 1 GLY C 133 ? HIS C 139 ? GLY C 133 HIS C 139 AA9 2 ILE C 154 ? GLY C 160 ? ILE C 154 GLY C 160 AA9 3 ASN C 193 ? LYS C 199 ? ASN C 193 LYS C 199 AA9 4 GLY C 218 ? ILE C 221 ? GLY C 218 ILE C 221 AA9 5 GLN C 245 ? ILE C 248 ? GLN C 245 ILE C 248 AA9 6 ILE C 271 ? SER C 273 ? ILE C 271 SER C 273 AA9 7 VAL C 296 ? PRO C 298 ? VAL C 296 PRO C 298 AB1 1 GLY C 133 ? HIS C 139 ? GLY C 133 HIS C 139 AB1 2 ILE C 154 ? GLY C 160 ? ILE C 154 GLY C 160 AB1 3 ASN C 193 ? LYS C 199 ? ASN C 193 LYS C 199 AB1 4 ILE C 492 ? MET C 495 ? ILE C 492 MET C 495 AB1 5 ARG C 513 ? THR C 516 ? ARG C 513 THR C 516 AB2 1 ILE C 537 ? ILE C 539 ? ILE C 537 ILE C 539 AB2 2 VAL C 546 ? VAL C 548 ? VAL C 546 VAL C 548 AB2 3 GLU C 551 ? VAL C 552 ? GLU C 551 VAL C 552 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 84 ? N ALA A 84 O LYS A 91 ? O LYS A 91 AA2 1 2 N ARG B 9 ? N ARG B 13 O GLN C 19 ? O GLN C 19 AA2 2 3 N VAL C 20 ? N VAL C 20 O ILE C 29 ? O ILE C 29 AA3 1 2 N ILE B 15 ? N ILE B 19 O ILE C 3 ? O ILE C 3 AA4 1 2 O LEU B 52 ? O LEU B 56 N SER B 29 ? N SER B 33 AA4 2 3 N ILE B 26 ? N ILE B 30 O VAL B 81 ? O VAL B 85 AA4 3 4 O THR B 84 ? O THR B 88 N ARG B 62 ? N ARG B 66 AA5 1 2 N VAL B 38 ? N VAL B 42 O ALA B 71 ? O ALA B 75 AA6 1 2 N VAL B 92 ? N VAL B 96 O GLY B 101 ? O GLY B 105 AA7 1 2 O GLY C 98 ? O GLY C 98 N ASP C 86 ? N ASP C 86 AA7 2 3 O VAL C 89 ? O VAL C 89 N LEU C 69 ? N LEU C 69 AA7 3 4 N LEU C 70 ? N LEU C 70 O ILE C 122 ? O ILE C 122 AA8 1 2 O GLY C 98 ? O GLY C 98 N ASP C 86 ? N ASP C 86 AA8 2 3 O VAL C 89 ? O VAL C 89 N LEU C 69 ? N LEU C 69 AA8 3 4 N LEU C 77 ? N LEU C 77 O VAL C 129 ? O VAL C 129 AA8 4 5 N ILE C 128 ? N ILE C 128 O TRP C 438 ? O TRP C 438 AA8 5 6 N LEU C 437 ? N LEU C 437 O ARG C 449 ? O ARG C 449 AA8 6 7 N VAL C 450 ? N VAL C 450 O TYR C 458 ? O TYR C 458 AA8 7 8 N ILE C 461 ? N ILE C 461 O MET C 475 ? O MET C 475 AA9 1 2 N ASP C 135 ? N ASP C 135 O PHE C 158 ? O PHE C 158 AA9 2 3 N LEU C 157 ? N LEU C 157 O ASN C 193 ? O ASN C 193 AA9 3 4 N GLY C 198 ? N GLY C 198 O GLY C 218 ? O GLY C 218 AA9 4 5 N ILE C 221 ? N ILE C 221 O ALA C 247 ? O ALA C 247 AA9 5 6 N VAL C 246 ? N VAL C 246 O HIS C 272 ? O HIS C 272 AA9 6 7 N ILE C 271 ? N ILE C 271 O LEU C 297 ? O LEU C 297 AB1 1 2 N ASP C 135 ? N ASP C 135 O PHE C 158 ? O PHE C 158 AB1 2 3 N LEU C 157 ? N LEU C 157 O ASN C 193 ? O ASN C 193 AB1 3 4 N VAL C 194 ? N VAL C 194 O ILE C 492 ? O ILE C 492 AB1 4 5 N THR C 493 ? N THR C 493 O ARG C 513 ? O ARG C 513 AB2 1 2 N ASP C 538 ? N ASP C 538 O LYS C 547 ? O LYS C 547 AB2 2 3 N VAL C 548 ? N VAL C 548 O GLU C 551 ? O GLU C 551 # _pdbx_entry_details.entry_id 9GNR _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE B 99 ? ? 55.09 -110.42 2 1 ALA C 23 ? ? 52.20 -140.62 3 1 MET C 54 ? ? -141.37 -157.11 4 1 PRO C 164 ? ? -75.96 48.73 5 1 ALA C 227 ? ? -91.98 52.84 6 1 LEU C 365 ? ? 57.80 10.40 7 1 ASP C 549 ? ? 47.95 27.47 8 1 ALA C 564 ? ? -146.79 -155.80 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CXM 1 A CXM 1 ? MET 'modified residue' 2 C KCX 220 C KCX 220 ? LYS 'modified residue' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9GNR _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'RIGID BODY FIT' # _em_3d_reconstruction.entry_id 9GNR _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.92 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 163588 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '50 mM HEPES buffer, at pH 7.5, also containing 5 mM NBPTO' _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type 'ORGANELLE OR CELLULAR COMPONENT' _em_entity_assembly.name urease _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3' # _em_imaging.entry_id 9GNR _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1200 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9GNR _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 283 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9GNR _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9GNR _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2PA N4 N N N 1 2PA N5 N N N 2 2PA O1 O N N 3 2PA P2 P N N 4 2PA O3 O N N 5 2PA HN41 H N N 6 2PA HN42 H N N 7 2PA HN51 H N N 8 2PA HN52 H N N 9 2PA HO31 H N N 10 ALA N N N N 11 ALA CA C N S 12 ALA C C N N 13 ALA O O N N 14 ALA CB C N N 15 ALA OXT O N N 16 ALA H H N N 17 ALA H2 H N N 18 ALA HA H N N 19 ALA HB1 H N N 20 ALA HB2 H N N 21 ALA HB3 H N N 22 ALA HXT H N N 23 ARG N N N N 24 ARG CA C N S 25 ARG C C N N 26 ARG O O N N 27 ARG CB C N N 28 ARG CG C N N 29 ARG CD C N N 30 ARG NE N N N 31 ARG CZ C N N 32 ARG NH1 N N N 33 ARG NH2 N N N 34 ARG OXT O N N 35 ARG H H N N 36 ARG H2 H N N 37 ARG HA H N N 38 ARG HB2 H N N 39 ARG HB3 H N N 40 ARG HG2 H N N 41 ARG HG3 H N N 42 ARG HD2 H N N 43 ARG HD3 H N N 44 ARG HE H N N 45 ARG HH11 H N N 46 ARG HH12 H N N 47 ARG HH21 H N N 48 ARG HH22 H N N 49 ARG HXT H N N 50 ASN N N N N 51 ASN CA C N S 52 ASN C C N N 53 ASN O O N N 54 ASN CB C N N 55 ASN CG C N N 56 ASN OD1 O N N 57 ASN ND2 N N N 58 ASN OXT O N N 59 ASN H H N N 60 ASN H2 H N N 61 ASN HA H N N 62 ASN HB2 H N N 63 ASN HB3 H N N 64 ASN HD21 H N N 65 ASN HD22 H N N 66 ASN HXT H N N 67 ASP N N N N 68 ASP CA C N S 69 ASP C C N N 70 ASP O O N N 71 ASP CB C N N 72 ASP CG C N N 73 ASP OD1 O N N 74 ASP OD2 O N N 75 ASP OXT O N N 76 ASP H H N N 77 ASP H2 H N N 78 ASP HA H N N 79 ASP HB2 H N N 80 ASP HB3 H N N 81 ASP HD2 H N N 82 ASP HXT H N N 83 CXM N N N N 84 CXM CA C N S 85 CXM CB C N N 86 CXM CG C N N 87 CXM SD S N N 88 CXM CE C N N 89 CXM C C N N 90 CXM O O N N 91 CXM CN C N N 92 CXM ON1 O N N 93 CXM ON2 O N N 94 CXM OXT O N N 95 CXM H H N N 96 CXM HA H N N 97 CXM HB2 H N N 98 CXM HB3 H N N 99 CXM HG2 H N N 100 CXM HG3 H N N 101 CXM HE1 H N N 102 CXM HE2 H N N 103 CXM HE3 H N N 104 CXM HO2 H N N 105 CXM HXT H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 ILE N N N N 191 ILE CA C N S 192 ILE C C N N 193 ILE O O N N 194 ILE CB C N S 195 ILE CG1 C N N 196 ILE CG2 C N N 197 ILE CD1 C N N 198 ILE OXT O N N 199 ILE H H N N 200 ILE H2 H N N 201 ILE HA H N N 202 ILE HB H N N 203 ILE HG12 H N N 204 ILE HG13 H N N 205 ILE HG21 H N N 206 ILE HG22 H N N 207 ILE HG23 H N N 208 ILE HD11 H N N 209 ILE HD12 H N N 210 ILE HD13 H N N 211 ILE HXT H N N 212 KCX N N N N 213 KCX CA C N S 214 KCX CB C N N 215 KCX CG C N N 216 KCX CD C N N 217 KCX CE C N N 218 KCX NZ N N N 219 KCX C C N N 220 KCX O O N N 221 KCX CX C N N 222 KCX OXT O N N 223 KCX OQ1 O N N 224 KCX OQ2 O N N 225 KCX H H N N 226 KCX H2 H N N 227 KCX HA H N N 228 KCX HB2 H N N 229 KCX HB3 H N N 230 KCX HG2 H N N 231 KCX HG3 H N N 232 KCX HD2 H N N 233 KCX HD3 H N N 234 KCX HE2 H N N 235 KCX HE3 H N N 236 KCX HZ H N N 237 KCX HXT H N N 238 KCX HQ2 H N N 239 LEU N N N N 240 LEU CA C N S 241 LEU C C N N 242 LEU O O N N 243 LEU CB C N N 244 LEU CG C N N 245 LEU CD1 C N N 246 LEU CD2 C N N 247 LEU OXT O N N 248 LEU H H N N 249 LEU H2 H N N 250 LEU HA H N N 251 LEU HB2 H N N 252 LEU HB3 H N N 253 LEU HG H N N 254 LEU HD11 H N N 255 LEU HD12 H N N 256 LEU HD13 H N N 257 LEU HD21 H N N 258 LEU HD22 H N N 259 LEU HD23 H N N 260 LEU HXT H N N 261 LYS N N N N 262 LYS CA C N S 263 LYS C C N N 264 LYS O O N N 265 LYS CB C N N 266 LYS CG C N N 267 LYS CD C N N 268 LYS CE C N N 269 LYS NZ N N N 270 LYS OXT O N N 271 LYS H H N N 272 LYS H2 H N N 273 LYS HA H N N 274 LYS HB2 H N N 275 LYS HB3 H N N 276 LYS HG2 H N N 277 LYS HG3 H N N 278 LYS HD2 H N N 279 LYS HD3 H N N 280 LYS HE2 H N N 281 LYS HE3 H N N 282 LYS HZ1 H N N 283 LYS HZ2 H N N 284 LYS HZ3 H N N 285 LYS HXT H N N 286 MET N N N N 287 MET CA C N S 288 MET C C N N 289 MET O O N N 290 MET CB C N N 291 MET CG C N N 292 MET SD S N N 293 MET CE C N N 294 MET OXT O N N 295 MET H H N N 296 MET H2 H N N 297 MET HA H N N 298 MET HB2 H N N 299 MET HB3 H N N 300 MET HG2 H N N 301 MET HG3 H N N 302 MET HE1 H N N 303 MET HE2 H N N 304 MET HE3 H N N 305 MET HXT H N N 306 NI NI NI N N 307 PHE N N N N 308 PHE CA C N S 309 PHE C C N N 310 PHE O O N N 311 PHE CB C N N 312 PHE CG C Y N 313 PHE CD1 C Y N 314 PHE CD2 C Y N 315 PHE CE1 C Y N 316 PHE CE2 C Y N 317 PHE CZ C Y N 318 PHE OXT O N N 319 PHE H H N N 320 PHE H2 H N N 321 PHE HA H N N 322 PHE HB2 H N N 323 PHE HB3 H N N 324 PHE HD1 H N N 325 PHE HD2 H N N 326 PHE HE1 H N N 327 PHE HE2 H N N 328 PHE HZ H N N 329 PHE HXT H N N 330 PRO N N N N 331 PRO CA C N S 332 PRO C C N N 333 PRO O O N N 334 PRO CB C N N 335 PRO CG C N N 336 PRO CD C N N 337 PRO OXT O N N 338 PRO H H N N 339 PRO HA H N N 340 PRO HB2 H N N 341 PRO HB3 H N N 342 PRO HG2 H N N 343 PRO HG3 H N N 344 PRO HD2 H N N 345 PRO HD3 H N N 346 PRO HXT H N N 347 SER N N N N 348 SER CA C N S 349 SER C C N N 350 SER O O N N 351 SER CB C N N 352 SER OG O N N 353 SER OXT O N N 354 SER H H N N 355 SER H2 H N N 356 SER HA H N N 357 SER HB2 H N N 358 SER HB3 H N N 359 SER HG H N N 360 SER HXT H N N 361 THR N N N N 362 THR CA C N S 363 THR C C N N 364 THR O O N N 365 THR CB C N R 366 THR OG1 O N N 367 THR CG2 C N N 368 THR OXT O N N 369 THR H H N N 370 THR H2 H N N 371 THR HA H N N 372 THR HB H N N 373 THR HG1 H N N 374 THR HG21 H N N 375 THR HG22 H N N 376 THR HG23 H N N 377 THR HXT H N N 378 TRP N N N N 379 TRP CA C N S 380 TRP C C N N 381 TRP O O N N 382 TRP CB C N N 383 TRP CG C Y N 384 TRP CD1 C Y N 385 TRP CD2 C Y N 386 TRP NE1 N Y N 387 TRP CE2 C Y N 388 TRP CE3 C Y N 389 TRP CZ2 C Y N 390 TRP CZ3 C Y N 391 TRP CH2 C Y N 392 TRP OXT O N N 393 TRP H H N N 394 TRP H2 H N N 395 TRP HA H N N 396 TRP HB2 H N N 397 TRP HB3 H N N 398 TRP HD1 H N N 399 TRP HE1 H N N 400 TRP HE3 H N N 401 TRP HZ2 H N N 402 TRP HZ3 H N N 403 TRP HH2 H N N 404 TRP HXT H N N 405 TYR N N N N 406 TYR CA C N S 407 TYR C C N N 408 TYR O O N N 409 TYR CB C N N 410 TYR CG C Y N 411 TYR CD1 C Y N 412 TYR CD2 C Y N 413 TYR CE1 C Y N 414 TYR CE2 C Y N 415 TYR CZ C Y N 416 TYR OH O N N 417 TYR OXT O N N 418 TYR H H N N 419 TYR H2 H N N 420 TYR HA H N N 421 TYR HB2 H N N 422 TYR HB3 H N N 423 TYR HD1 H N N 424 TYR HD2 H N N 425 TYR HE1 H N N 426 TYR HE2 H N N 427 TYR HH H N N 428 TYR HXT H N N 429 VAL N N N N 430 VAL CA C N S 431 VAL C C N N 432 VAL O O N N 433 VAL CB C N N 434 VAL CG1 C N N 435 VAL CG2 C N N 436 VAL OXT O N N 437 VAL H H N N 438 VAL H2 H N N 439 VAL HA H N N 440 VAL HB H N N 441 VAL HG11 H N N 442 VAL HG12 H N N 443 VAL HG13 H N N 444 VAL HG21 H N N 445 VAL HG22 H N N 446 VAL HG23 H N N 447 VAL HXT H N N 448 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2PA N4 P2 sing N N 1 2PA N4 HN41 sing N N 2 2PA N4 HN42 sing N N 3 2PA N5 P2 sing N N 4 2PA N5 HN51 sing N N 5 2PA N5 HN52 sing N N 6 2PA O1 P2 doub N N 7 2PA P2 O3 sing N N 8 2PA O3 HO31 sing N N 9 ALA N CA sing N N 10 ALA N H sing N N 11 ALA N H2 sing N N 12 ALA CA C sing N N 13 ALA CA CB sing N N 14 ALA CA HA sing N N 15 ALA C O doub N N 16 ALA C OXT sing N N 17 ALA CB HB1 sing N N 18 ALA CB HB2 sing N N 19 ALA CB HB3 sing N N 20 ALA OXT HXT sing N N 21 ARG N CA sing N N 22 ARG N H sing N N 23 ARG N H2 sing N N 24 ARG CA C sing N N 25 ARG CA CB sing N N 26 ARG CA HA sing N N 27 ARG C O doub N N 28 ARG C OXT sing N N 29 ARG CB CG sing N N 30 ARG CB HB2 sing N N 31 ARG CB HB3 sing N N 32 ARG CG CD sing N N 33 ARG CG HG2 sing N N 34 ARG CG HG3 sing N N 35 ARG CD NE sing N N 36 ARG CD HD2 sing N N 37 ARG CD HD3 sing N N 38 ARG NE CZ sing N N 39 ARG NE HE sing N N 40 ARG CZ NH1 sing N N 41 ARG CZ NH2 doub N N 42 ARG NH1 HH11 sing N N 43 ARG NH1 HH12 sing N N 44 ARG NH2 HH21 sing N N 45 ARG NH2 HH22 sing N N 46 ARG OXT HXT sing N N 47 ASN N CA sing N N 48 ASN N H sing N N 49 ASN N H2 sing N N 50 ASN CA C sing N N 51 ASN CA CB sing N N 52 ASN CA HA sing N N 53 ASN C O doub N N 54 ASN C OXT sing N N 55 ASN CB CG sing N N 56 ASN CB HB2 sing N N 57 ASN CB HB3 sing N N 58 ASN CG OD1 doub N N 59 ASN CG ND2 sing N N 60 ASN ND2 HD21 sing N N 61 ASN ND2 HD22 sing N N 62 ASN OXT HXT sing N N 63 ASP N CA sing N N 64 ASP N H sing N N 65 ASP N H2 sing N N 66 ASP CA C sing N N 67 ASP CA CB sing N N 68 ASP CA HA sing N N 69 ASP C O doub N N 70 ASP C OXT sing N N 71 ASP CB CG sing N N 72 ASP CB HB2 sing N N 73 ASP CB HB3 sing N N 74 ASP CG OD1 doub N N 75 ASP CG OD2 sing N N 76 ASP OD2 HD2 sing N N 77 ASP OXT HXT sing N N 78 CXM N CA sing N N 79 CXM N CN sing N N 80 CXM N H sing N N 81 CXM CA CB sing N N 82 CXM CA C sing N N 83 CXM CA HA sing N N 84 CXM CB CG sing N N 85 CXM CB HB2 sing N N 86 CXM CB HB3 sing N N 87 CXM CG SD sing N N 88 CXM CG HG2 sing N N 89 CXM CG HG3 sing N N 90 CXM SD CE sing N N 91 CXM CE HE1 sing N N 92 CXM CE HE2 sing N N 93 CXM CE HE3 sing N N 94 CXM C O doub N N 95 CXM C OXT sing N N 96 CXM CN ON1 doub N N 97 CXM CN ON2 sing N N 98 CXM ON2 HO2 sing N N 99 CXM OXT HXT sing N N 100 CYS N CA sing N N 101 CYS N H sing N N 102 CYS N H2 sing N N 103 CYS CA C sing N N 104 CYS CA CB sing N N 105 CYS CA HA sing N N 106 CYS C O doub N N 107 CYS C OXT sing N N 108 CYS CB SG sing N N 109 CYS CB HB2 sing N N 110 CYS CB HB3 sing N N 111 CYS SG HG sing N N 112 CYS OXT HXT sing N N 113 GLN N CA sing N N 114 GLN N H sing N N 115 GLN N H2 sing N N 116 GLN CA C sing N N 117 GLN CA CB sing N N 118 GLN CA HA sing N N 119 GLN C O doub N N 120 GLN C OXT sing N N 121 GLN CB CG sing N N 122 GLN CB HB2 sing N N 123 GLN CB HB3 sing N N 124 GLN CG CD sing N N 125 GLN CG HG2 sing N N 126 GLN CG HG3 sing N N 127 GLN CD OE1 doub N N 128 GLN CD NE2 sing N N 129 GLN NE2 HE21 sing N N 130 GLN NE2 HE22 sing N N 131 GLN OXT HXT sing N N 132 GLU N CA sing N N 133 GLU N H sing N N 134 GLU N H2 sing N N 135 GLU CA C sing N N 136 GLU CA CB sing N N 137 GLU CA HA sing N N 138 GLU C O doub N N 139 GLU C OXT sing N N 140 GLU CB CG sing N N 141 GLU CB HB2 sing N N 142 GLU CB HB3 sing N N 143 GLU CG CD sing N N 144 GLU CG HG2 sing N N 145 GLU CG HG3 sing N N 146 GLU CD OE1 doub N N 147 GLU CD OE2 sing N N 148 GLU OE2 HE2 sing N N 149 GLU OXT HXT sing N N 150 GLY N CA sing N N 151 GLY N H sing N N 152 GLY N H2 sing N N 153 GLY CA C sing N N 154 GLY CA HA2 sing N N 155 GLY CA HA3 sing N N 156 GLY C O doub N N 157 GLY C OXT sing N N 158 GLY OXT HXT sing N N 159 HIS N CA sing N N 160 HIS N H sing N N 161 HIS N H2 sing N N 162 HIS CA C sing N N 163 HIS CA CB sing N N 164 HIS CA HA sing N N 165 HIS C O doub N N 166 HIS C OXT sing N N 167 HIS CB CG sing N N 168 HIS CB HB2 sing N N 169 HIS CB HB3 sing N N 170 HIS CG ND1 sing Y N 171 HIS CG CD2 doub Y N 172 HIS ND1 CE1 doub Y N 173 HIS ND1 HD1 sing N N 174 HIS CD2 NE2 sing Y N 175 HIS CD2 HD2 sing N N 176 HIS CE1 NE2 sing Y N 177 HIS CE1 HE1 sing N N 178 HIS NE2 HE2 sing N N 179 HIS OXT HXT sing N N 180 ILE N CA sing N N 181 ILE N H sing N N 182 ILE N H2 sing N N 183 ILE CA C sing N N 184 ILE CA CB sing N N 185 ILE CA HA sing N N 186 ILE C O doub N N 187 ILE C OXT sing N N 188 ILE CB CG1 sing N N 189 ILE CB CG2 sing N N 190 ILE CB HB sing N N 191 ILE CG1 CD1 sing N N 192 ILE CG1 HG12 sing N N 193 ILE CG1 HG13 sing N N 194 ILE CG2 HG21 sing N N 195 ILE CG2 HG22 sing N N 196 ILE CG2 HG23 sing N N 197 ILE CD1 HD11 sing N N 198 ILE CD1 HD12 sing N N 199 ILE CD1 HD13 sing N N 200 ILE OXT HXT sing N N 201 KCX N CA sing N N 202 KCX N H sing N N 203 KCX N H2 sing N N 204 KCX CA CB sing N N 205 KCX CA C sing N N 206 KCX CA HA sing N N 207 KCX CB CG sing N N 208 KCX CB HB2 sing N N 209 KCX CB HB3 sing N N 210 KCX CG CD sing N N 211 KCX CG HG2 sing N N 212 KCX CG HG3 sing N N 213 KCX CD CE sing N N 214 KCX CD HD2 sing N N 215 KCX CD HD3 sing N N 216 KCX CE NZ sing N N 217 KCX CE HE2 sing N N 218 KCX CE HE3 sing N N 219 KCX NZ CX sing N N 220 KCX NZ HZ sing N N 221 KCX C O doub N N 222 KCX C OXT sing N N 223 KCX CX OQ1 doub N N 224 KCX CX OQ2 sing N N 225 KCX OXT HXT sing N N 226 KCX OQ2 HQ2 sing N N 227 LEU N CA sing N N 228 LEU N H sing N N 229 LEU N H2 sing N N 230 LEU CA C sing N N 231 LEU CA CB sing N N 232 LEU CA HA sing N N 233 LEU C O doub N N 234 LEU C OXT sing N N 235 LEU CB CG sing N N 236 LEU CB HB2 sing N N 237 LEU CB HB3 sing N N 238 LEU CG CD1 sing N N 239 LEU CG CD2 sing N N 240 LEU CG HG sing N N 241 LEU CD1 HD11 sing N N 242 LEU CD1 HD12 sing N N 243 LEU CD1 HD13 sing N N 244 LEU CD2 HD21 sing N N 245 LEU CD2 HD22 sing N N 246 LEU CD2 HD23 sing N N 247 LEU OXT HXT sing N N 248 LYS N CA sing N N 249 LYS N H sing N N 250 LYS N H2 sing N N 251 LYS CA C sing N N 252 LYS CA CB sing N N 253 LYS CA HA sing N N 254 LYS C O doub N N 255 LYS C OXT sing N N 256 LYS CB CG sing N N 257 LYS CB HB2 sing N N 258 LYS CB HB3 sing N N 259 LYS CG CD sing N N 260 LYS CG HG2 sing N N 261 LYS CG HG3 sing N N 262 LYS CD CE sing N N 263 LYS CD HD2 sing N N 264 LYS CD HD3 sing N N 265 LYS CE NZ sing N N 266 LYS CE HE2 sing N N 267 LYS CE HE3 sing N N 268 LYS NZ HZ1 sing N N 269 LYS NZ HZ2 sing N N 270 LYS NZ HZ3 sing N N 271 LYS OXT HXT sing N N 272 MET N CA sing N N 273 MET N H sing N N 274 MET N H2 sing N N 275 MET CA C sing N N 276 MET CA CB sing N N 277 MET CA HA sing N N 278 MET C O doub N N 279 MET C OXT sing N N 280 MET CB CG sing N N 281 MET CB HB2 sing N N 282 MET CB HB3 sing N N 283 MET CG SD sing N N 284 MET CG HG2 sing N N 285 MET CG HG3 sing N N 286 MET SD CE sing N N 287 MET CE HE1 sing N N 288 MET CE HE2 sing N N 289 MET CE HE3 sing N N 290 MET OXT HXT sing N N 291 PHE N CA sing N N 292 PHE N H sing N N 293 PHE N H2 sing N N 294 PHE CA C sing N N 295 PHE CA CB sing N N 296 PHE CA HA sing N N 297 PHE C O doub N N 298 PHE C OXT sing N N 299 PHE CB CG sing N N 300 PHE CB HB2 sing N N 301 PHE CB HB3 sing N N 302 PHE CG CD1 doub Y N 303 PHE CG CD2 sing Y N 304 PHE CD1 CE1 sing Y N 305 PHE CD1 HD1 sing N N 306 PHE CD2 CE2 doub Y N 307 PHE CD2 HD2 sing N N 308 PHE CE1 CZ doub Y N 309 PHE CE1 HE1 sing N N 310 PHE CE2 CZ sing Y N 311 PHE CE2 HE2 sing N N 312 PHE CZ HZ sing N N 313 PHE OXT HXT sing N N 314 PRO N CA sing N N 315 PRO N CD sing N N 316 PRO N H sing N N 317 PRO CA C sing N N 318 PRO CA CB sing N N 319 PRO CA HA sing N N 320 PRO C O doub N N 321 PRO C OXT sing N N 322 PRO CB CG sing N N 323 PRO CB HB2 sing N N 324 PRO CB HB3 sing N N 325 PRO CG CD sing N N 326 PRO CG HG2 sing N N 327 PRO CG HG3 sing N N 328 PRO CD HD2 sing N N 329 PRO CD HD3 sing N N 330 PRO OXT HXT sing N N 331 SER N CA sing N N 332 SER N H sing N N 333 SER N H2 sing N N 334 SER CA C sing N N 335 SER CA CB sing N N 336 SER CA HA sing N N 337 SER C O doub N N 338 SER C OXT sing N N 339 SER CB OG sing N N 340 SER CB HB2 sing N N 341 SER CB HB3 sing N N 342 SER OG HG sing N N 343 SER OXT HXT sing N N 344 THR N CA sing N N 345 THR N H sing N N 346 THR N H2 sing N N 347 THR CA C sing N N 348 THR CA CB sing N N 349 THR CA HA sing N N 350 THR C O doub N N 351 THR C OXT sing N N 352 THR CB OG1 sing N N 353 THR CB CG2 sing N N 354 THR CB HB sing N N 355 THR OG1 HG1 sing N N 356 THR CG2 HG21 sing N N 357 THR CG2 HG22 sing N N 358 THR CG2 HG23 sing N N 359 THR OXT HXT sing N N 360 TRP N CA sing N N 361 TRP N H sing N N 362 TRP N H2 sing N N 363 TRP CA C sing N N 364 TRP CA CB sing N N 365 TRP CA HA sing N N 366 TRP C O doub N N 367 TRP C OXT sing N N 368 TRP CB CG sing N N 369 TRP CB HB2 sing N N 370 TRP CB HB3 sing N N 371 TRP CG CD1 doub Y N 372 TRP CG CD2 sing Y N 373 TRP CD1 NE1 sing Y N 374 TRP CD1 HD1 sing N N 375 TRP CD2 CE2 doub Y N 376 TRP CD2 CE3 sing Y N 377 TRP NE1 CE2 sing Y N 378 TRP NE1 HE1 sing N N 379 TRP CE2 CZ2 sing Y N 380 TRP CE3 CZ3 doub Y N 381 TRP CE3 HE3 sing N N 382 TRP CZ2 CH2 doub Y N 383 TRP CZ2 HZ2 sing N N 384 TRP CZ3 CH2 sing Y N 385 TRP CZ3 HZ3 sing N N 386 TRP CH2 HH2 sing N N 387 TRP OXT HXT sing N N 388 TYR N CA sing N N 389 TYR N H sing N N 390 TYR N H2 sing N N 391 TYR CA C sing N N 392 TYR CA CB sing N N 393 TYR CA HA sing N N 394 TYR C O doub N N 395 TYR C OXT sing N N 396 TYR CB CG sing N N 397 TYR CB HB2 sing N N 398 TYR CB HB3 sing N N 399 TYR CG CD1 doub Y N 400 TYR CG CD2 sing Y N 401 TYR CD1 CE1 sing Y N 402 TYR CD1 HD1 sing N N 403 TYR CD2 CE2 doub Y N 404 TYR CD2 HD2 sing N N 405 TYR CE1 CZ doub Y N 406 TYR CE1 HE1 sing N N 407 TYR CE2 CZ sing Y N 408 TYR CE2 HE2 sing N N 409 TYR CZ OH sing N N 410 TYR OH HH sing N N 411 TYR OXT HXT sing N N 412 VAL N CA sing N N 413 VAL N H sing N N 414 VAL N H2 sing N N 415 VAL CA C sing N N 416 VAL CA CB sing N N 417 VAL CA HA sing N N 418 VAL C O doub N N 419 VAL C OXT sing N N 420 VAL CB CG1 sing N N 421 VAL CB CG2 sing N N 422 VAL CB HB sing N N 423 VAL CG1 HG11 sing N N 424 VAL CG1 HG12 sing N N 425 VAL CG1 HG13 sing N N 426 VAL CG2 HG21 sing N N 427 VAL CG2 HG22 sing N N 428 VAL CG2 HG23 sing N N 429 VAL OXT HXT sing N N 430 # _em_admin.current_status REL _em_admin.deposition_date 2024-09-03 _em_admin.deposition_site PDBE _em_admin.entry_id 9GNR _em_admin.last_update 2025-07-23 _em_admin.map_release_date 2025-07-23 _em_admin.title 'Cryo-EM structure of Sporosarcina pasteurii urease inhibited by NBPTO' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.25 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 1474 _em_entity_assembly_naturalsource.organism 'Sporosarcina pasteurii' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 3.2 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 30 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 1459548 # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? CLASSIFICATION ? 11 1 ? ? ? ? RECONSTRUCTION ? 12 1 ? ? ? ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration 2 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9GNR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N NI O P S # loop_ #