HEADER MEMBRANE PROTEIN 09-SEP-24 9GQO TITLE STRUCTURE OF A CA2+ BOUND PHOSPHOENZYME INTERMEDIATE IN THE INWARD-TO- TITLE 2 OUTWARD TRANSITION OF CA2+-ATPASE 1 FROM LISTERIA MONOCYTOGENES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALCIUM-TRANSPORTING ATPASE LMO0841; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LMCA1; COMPND 5 EC: 7.2.2.10; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 GENE: LMO0841; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEMBRANE PROTEIN, INTERMEDIATE, P-TYPE ATPASE, CALCIUM TRANSPORT EXPDTA ELECTRON MICROSCOPY AUTHOR S.B.HANSEN,R.F.FLYGAARD,M.KJAERGAARD,P.NISSEN REVDAT 4 25-JUN-25 9GQO 1 REMARK REVDAT 3 16-APR-25 9GQO 1 JRNL REVDAT 2 02-APR-25 9GQO 1 COMPND SOURCE JRNL REMARK REVDAT 2 2 1 DBREF SEQADV SEQRES HET REVDAT 2 3 1 HETNAM FORMUL HELIX SHEET REVDAT 2 4 1 LINK ATOM REVDAT 1 16-OCT-24 9GQO 0 JRNL AUTH S.BASSE HANSEN,R.K.FLYGAARD,M.KJAERGAARD,P.NISSEN JRNL TITL STRUCTURE OF THE [CA]E2P INTERMEDIATE OF CA 2+ -ATPASE 1 JRNL TITL 2 FROM LISTERIA MONOCYTOGENES. JRNL REF EMBO REP. V. 26 1709 2025 JRNL REFN ESSN 1469-3178 JRNL PMID 40016426 JRNL DOI 10.1038/S44319-025-00392-X REMARK 2 REMARK 2 RESOLUTION. 3.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.460 REMARK 3 NUMBER OF PARTICLES : 101034 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9GQO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1292139022. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CA2+-ATPASE 1 FROM LISTERIA REMARK 245 MONOCYTOGENES (LMCA1) WITH CA2+, REMARK 245 PO4- AND MG2+. REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.70 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.60 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5875.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 44A REMARK 465 GLY A 44B REMARK 465 GLY A 44C REMARK 465 GLY A 44D REMARK 465 ASP A 881 REMARK 465 TYR A 882 REMARK 465 ASP A 883 REMARK 465 ILE A 884 REMARK 465 PRO A 885 REMARK 465 THR A 886 REMARK 465 THR A 887 REMARK 465 GLU A 888 REMARK 465 ASN A 889 REMARK 465 LEU A 890 REMARK 465 TYR A 891 REMARK 465 PHE A 892 REMARK 465 GLN A 893 REMARK 465 GLY A 894 REMARK 465 LEU A 895 REMARK 465 GLU A 896 REMARK 465 HIS A 897 REMARK 465 HIS A 898 REMARK 465 HIS A 899 REMARK 465 HIS A 900 REMARK 465 HIS A 901 REMARK 465 HIS A 902 REMARK 465 HIS A 903 REMARK 465 HIS A 904 REMARK 465 HIS A 905 REMARK 465 HIS A 906 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLY A 134 O VAL A 206 1.46 REMARK 500 O TYR A 460 H LEU A 517 1.56 REMARK 500 O ILE A 275 H PHE A 279 1.57 REMARK 500 OG SER A 642 OD2 ASP A 658 2.00 REMARK 500 OG1 THR A 789 OH TYR A 831 2.12 REMARK 500 NZ LYS A 498 O GLN A 513 2.13 REMARK 500 O ALA A 288 ND2 ASN A 688 2.13 REMARK 500 NH2 ARG A 150 O ASP A 176 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 -51.21 66.40 REMARK 500 GLU A 19 -5.70 68.54 REMARK 500 ASN A 41 48.16 -83.82 REMARK 500 LYS A 43 -9.64 71.67 REMARK 500 LYS A 49 -31.56 -131.47 REMARK 500 LEU A 50 -4.93 67.79 REMARK 500 PHE A 55 51.54 -92.72 REMARK 500 ASP A 105 -0.35 81.35 REMARK 500 ASP A 180 36.97 -99.41 REMARK 500 ALA A 210 -173.82 -174.69 REMARK 500 ASP A 266 10.42 56.11 REMARK 500 PRO A 320 -5.92 -58.96 REMARK 500 THR A 333 -169.75 -117.54 REMARK 500 PHD A 334 83.85 -158.97 REMARK 500 LYS A 335 -75.53 -23.36 REMARK 500 GLU A 391 58.47 38.78 REMARK 500 ASN A 408 -1.31 67.92 REMARK 500 ASN A 440 48.55 39.97 REMARK 500 GLU A 441 -8.68 72.73 REMARK 500 MET A 470 10.84 53.42 REMARK 500 GLU A 473 -9.31 71.55 REMARK 500 ALA A 489 61.00 60.71 REMARK 500 ALA A 502 -139.14 50.64 REMARK 500 ASP A 551 -177.31 -66.30 REMARK 500 MET A 729 30.67 -94.53 REMARK 500 SER A 848 -6.63 71.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 5 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 287 O REMARK 620 2 ALA A 288 O 92.6 REMARK 620 3 ILE A 290 O 91.8 105.8 REMARK 620 4 ASP A 720 OD2 144.7 116.4 98.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHD A 334 OD2 REMARK 620 2 PHD A 334 OP2 75.3 REMARK 620 3 THR A 336 O 92.2 146.6 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-51510 RELATED DB: EMDB REMARK 900 STRUCTURE OF A CA2+ BOUND PHOSPHOENZYME INTERMEDIATE IN THE INWARD- REMARK 900 TO-OUTWARD TRANSITION OF CA2+-ATPASE 1 FROM LISTERIA MONOCYTOGENES DBREF 9GQO A 2 880 UNP Q8Y8Q5 LMCA1_LISMO 2 880 SEQADV 9GQO MET A 0 UNP Q8Y8Q5 INITIATING METHIONINE SEQADV 9GQO ALA A 1 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO GLY A 44A UNP Q8Y8Q5 INSERTION SEQADV 9GQO GLY A 44B UNP Q8Y8Q5 INSERTION SEQADV 9GQO GLY A 44C UNP Q8Y8Q5 INSERTION SEQADV 9GQO GLY A 44D UNP Q8Y8Q5 INSERTION SEQADV 9GQO ASP A 881 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO TYR A 882 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO ASP A 883 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO ILE A 884 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO PRO A 885 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO THR A 886 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO THR A 887 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO GLU A 888 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO ASN A 889 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO LEU A 890 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO TYR A 891 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO PHE A 892 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO GLN A 893 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO GLY A 894 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO LEU A 895 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO GLU A 896 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 897 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 898 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 899 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 900 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 901 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 902 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 903 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 904 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 905 UNP Q8Y8Q5 EXPRESSION TAG SEQADV 9GQO HIS A 906 UNP Q8Y8Q5 EXPRESSION TAG SEQRES 1 A 911 MET ALA GLU ILE TYR ARG LYS SER ALA ALA GLU THR PHE SEQRES 2 A 911 THR GLN LEU GLU ALA THR GLU LYS GLY LEU THR THR SER SEQRES 3 A 911 GLU VAL THR LYS ARG GLN GLU LYS TYR GLY PHE ASN GLU SEQRES 4 A 911 LEU LYS ASN LYS LYS LYS GLY GLY GLY GLY ASP PRO LEU SEQRES 5 A 911 TRP LYS LEU PHE LEU GLU THR PHE LYS ASP PRO MET VAL SEQRES 6 A 911 ILE VAL LEU VAL ILE ALA ALA LEU VAL GLN LEU VAL LEU SEQRES 7 A 911 GLY GLU VAL VAL GLU SER LEU ILE ILE PHE LEU VAL LEU SEQRES 8 A 911 ILE VAL ASN SER ILE ILE SER VAL VAL GLN THR ARG LYS SEQRES 9 A 911 ALA GLU SER SER LEU ASP ALA LEU ARG GLU MET SER ALA SEQRES 10 A 911 PRO VAL ALA LYS VAL ILE ARG ASP GLY SER LYS GLN SER SEQRES 11 A 911 ILE HIS ALA ARG GLU LEU VAL PRO GLY ASP VAL VAL ILE SEQRES 12 A 911 LEU ASP ALA GLY ASP PHE VAL PRO ALA ASP GLY ARG LEU SEQRES 13 A 911 PHE GLU SER GLY SER LEU LYS ILE ASP GLU GLY MET LEU SEQRES 14 A 911 THR GLY GLU SER GLU ALA VAL GLU LYS TYR ILE ASP THR SEQRES 15 A 911 ILE PRO ASP GLU VAL GLY LEU GLY ASP ARG VAL ASN MET SEQRES 16 A 911 VAL PHE SER GLY SER LEU VAL VAL TYR GLY ARG GLY MET SEQRES 17 A 911 PHE VAL VAL THR GLY THR ALA SER GLU THR GLU ILE GLY SEQRES 18 A 911 LYS ILE ALA GLY LEU LEU GLU THR ALA GLU ALA LYS GLN SEQRES 19 A 911 THR PRO LEU GLN ARG LYS LEU GLU SER PHE SER LYS LYS SEQRES 20 A 911 LEU GLY LEU GLY ILE LEU ALA LEU CYS VAL LEU ILE PHE SEQRES 21 A 911 ALA VAL GLU ALA GLY ARG VAL LEU LEU GLY ASP ASN SER SEQRES 22 A 911 ALA ASP MET ALA THR ALA ILE LEU ASN ALA PHE MET PHE SEQRES 23 A 911 ALA VAL ALA VAL ALA VAL ALA ALA ILE PRO GLU ALA LEU SEQRES 24 A 911 SER SER ILE VAL THR ILE VAL LEU ALA VAL GLY THR ASN SEQRES 25 A 911 LYS MET ALA LYS GLN HIS ALA ILE ILE ARG LYS LEU PRO SEQRES 26 A 911 ALA VAL GLU THR LEU GLY SER THR SER VAL ILE CYS THR SEQRES 27 A 911 PHD LYS THR GLY THR LEU THR GLN ASN LYS MET THR VAL SEQRES 28 A 911 VAL ASP TYR TYR LEU PRO ASP GLY THR LYS GLU ASN PHE SEQRES 29 A 911 PRO GLU SER PRO GLU ASN TRP SER GLU GLY GLU ARG ARG SEQRES 30 A 911 LEU ILE HIS ILE ALA VAL LEU CYS ASN ASP SER ASN ILE SEQRES 31 A 911 ASN SER GLU GLY LYS GLU LEU GLY ASP PRO THR GLU VAL SEQRES 32 A 911 ALA LEU ILE ALA PHE SER ASN LYS ASN ASN GLN ASP TYR SEQRES 33 A 911 ASN GLU ILE ARG GLU LYS PHE ILE ARG GLU GLY GLU ILE SEQRES 34 A 911 PRO PHE ASP SER ASP ARG LYS LEU MET SER THR LEU HIS SEQRES 35 A 911 THR PHE ASN GLU ASN LYS ALA MET LEU THR LYS GLY GLY SEQRES 36 A 911 PRO ASP VAL MET PHE ALA ARG CYS SER TYR VAL PHE LEU SEQRES 37 A 911 ASP GLY GLU GLU LYS PRO MET THR GLU GLU ILE LEU ALA SEQRES 38 A 911 LYS LEU LYS GLU THR ASN GLU GLU PHE SER ASN GLN ALA SEQRES 39 A 911 LEU ARG VAL LEU ALA TYR GLY TYR LYS ARG MET PRO ALA SEQRES 40 A 911 ASP THR THR GLU LEU LYS LEU GLU ASP GLU GLN ASP ILE SEQRES 41 A 911 VAL LEU VAL GLY LEU THR ALA MET ILE ASP PRO PRO ARG SEQRES 42 A 911 GLU ALA VAL TYR ALA SER ILE GLU GLU SER LYS LYS ALA SEQRES 43 A 911 GLY ILE ARG THR VAL MET ILE THR GLY ASP HIS LYS THR SEQRES 44 A 911 THR ALA GLN ALA ILE GLY ARG ASP ILE GLY LEU MET ASP SEQRES 45 A 911 ALA ASP ASP ILE ALA LEU THR GLY GLN GLU LEU ASP ALA SEQRES 46 A 911 MET PRO GLU GLU GLU LEU ASP LYS LYS LEU GLU HIS ILE SEQRES 47 A 911 ALA VAL TYR ALA ARG VAL SER PRO GLU ASN LYS ILE ARG SEQRES 48 A 911 ILE VAL LYS ALA TRP GLN LYS LYS GLY LYS ILE THR ALA SEQRES 49 A 911 MET THR GLY ASP GLY VAL ASN ASP ALA PRO ALA LEU LYS SEQRES 50 A 911 GLN ALA ASP ILE GLY VAL ALA MET GLY SER GLY THR ASP SEQRES 51 A 911 VAL ALA LYS ASP SER ALA ALA MET ILE LEU THR ASP ASP SEQRES 52 A 911 ASN PHE VAL SER ILE VAL ASP ALA VAL GLY VAL GLY ARG SEQRES 53 A 911 THR VAL PHE ASP ASN ILE LYS LYS SER ILE ALA TYR LEU SEQRES 54 A 911 PHE ALA GLY ASN LEU GLY ALA ILE ILE ALA ILE LEU PHE SEQRES 55 A 911 ALA LEU VAL LEU ASP TRP ILE ASN PRO PHE THR ALA LEU SEQRES 56 A 911 GLN LEU LEU PHE ILE ASN LEU VAL ASN ASP SER LEU PRO SEQRES 57 A 911 ALA ILE ALA LEU GLY MET GLU LYS ALA GLU PRO ASP VAL SEQRES 58 A 911 MET LYS ARG LYS PRO ARG ASP ILE ASN GLU GLY ILE PHE SEQRES 59 A 911 ALA GLY GLY THR MET ARG ALA VAL ILE SER ARG GLY VAL SEQRES 60 A 911 LEU ILE GLY ILE ALA VAL ILE ILE SER GLN TYR ILE GLY SEQRES 61 A 911 MET GLN ILE SER PRO GLU MET SER VAL ALA MET ALA PHE SEQRES 62 A 911 THR THR LEU ILE LEU ALA ARG THR LEU GLN THR PHE ALA SEQRES 63 A 911 ALA ARG SER ASN VAL GLN THR ALA PHE GLY ALA GLY PHE SEQRES 64 A 911 PHE SER ASN LYS TYR VAL ILE GLY ALA VAL LEU LEU CYS SEQRES 65 A 911 PHE VAL LEU TYR GLY ILE THR VAL LEU PRO GLY ALA ARG SEQRES 66 A 911 GLU ILE PHE SER ILE PRO ALA SER PHE GLY LEU HIS GLU SEQRES 67 A 911 TRP SER ILE ALA ALA GLY LEU ALA LEU ALA ALA VAL VAL SEQRES 68 A 911 MET MET GLU ILE ILE LYS VAL VAL GLN ASN LYS PHE PHE SEQRES 69 A 911 LYS ASP TYR ASP ILE PRO THR THR GLU ASN LEU TYR PHE SEQRES 70 A 911 GLN GLY LEU GLU HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 71 A 911 HIS MODRES 9GQO PHD A 334 ASP MODIFIED RESIDUE HET PHD A 334 16 HET CA A1001 1 HET MG A1002 1 HETNAM PHD ASPARTYL PHOSPHATE HETNAM CA CALCIUM ION HETNAM MG MAGNESIUM ION FORMUL 1 PHD C4 H8 N O7 P FORMUL 2 CA CA 2+ FORMUL 3 MG MG 2+ HELIX 1 AA1 GLU A 10 LEU A 15 1 6 HELIX 2 AA2 THR A 23 GLY A 35 1 13 HELIX 3 AA3 LEU A 50 PHE A 55 1 6 HELIX 4 AA4 VAL A 64 VAL A 72 1 9 HELIX 5 AA5 LEU A 80 LYS A 99 1 20 HELIX 6 AA6 ARG A 129 LEU A 131 5 3 HELIX 7 AA7 GLU A 161 LEU A 164 5 4 HELIX 8 AA8 THR A 213 GLU A 223 1 11 HELIX 9 AA9 THR A 230 LYS A 235 5 6 HELIX 10 AB1 LEU A 236 PHE A 255 1 20 HELIX 11 AB2 GLU A 258 LEU A 263 1 6 HELIX 12 AB3 THR A 273 ILE A 290 1 18 HELIX 13 AB4 PRO A 291 LYS A 311 1 21 HELIX 14 AB5 GLU A 323 THR A 328 1 6 HELIX 15 AB6 PHD A 334 LEU A 339 1 6 HELIX 16 AB7 SER A 362 TRP A 366 5 5 HELIX 17 AB8 GLY A 369 CYS A 380 1 12 HELIX 18 AB9 ASP A 394 ASN A 407 1 14 HELIX 19 AC1 ASP A 410 PHE A 418 1 9 HELIX 20 AC2 GLY A 450 CYS A 458 1 9 HELIX 21 AC3 ILE A 474 GLN A 488 1 15 HELIX 22 AC4 GLU A 529 ALA A 541 1 13 HELIX 23 AC5 HIS A 552 ASP A 562 1 11 HELIX 24 AC6 GLY A 575 ASP A 579 1 5 HELIX 25 AC7 PRO A 582 GLU A 591 1 10 HELIX 26 AC8 SER A 600 LYS A 614 1 15 HELIX 27 AC9 GLY A 624 ASN A 626 5 3 HELIX 28 AD1 ASP A 627 ALA A 634 1 8 HELIX 29 AD2 THR A 644 ALA A 651 1 8 HELIX 30 AD3 PHE A 660 LEU A 701 1 42 HELIX 31 AD4 THR A 708 ASP A 720 1 13 HELIX 32 AD5 SER A 721 GLY A 728 1 8 HELIX 33 AD6 ALA A 750 MET A 776 1 27 HELIX 34 AD7 MET A 782 GLN A 798 1 17 HELIX 35 AD8 GLN A 798 ARG A 803 1 6 HELIX 36 AD9 ASN A 817 LEU A 836 1 20 HELIX 37 AE1 GLU A 853 LYS A 877 1 25 SHEET 1 AA1 2 VAL A 114 ARG A 119 0 SHEET 2 AA1 2 SER A 122 HIS A 127 -1 O GLN A 124 N VAL A 117 SHEET 1 AA2 3 VAL A 136 LEU A 139 0 SHEET 2 AA2 3 GLY A 202 GLY A 208 -1 O GLY A 202 N LEU A 139 SHEET 3 AA2 3 ASP A 148 GLU A 153 -1 N ARG A 150 O VAL A 205 SHEET 1 AA3 3 VAL A 171 LYS A 173 0 SHEET 2 AA3 3 LEU A 157 ASP A 160 -1 N LEU A 157 O LYS A 173 SHEET 3 AA3 3 LEU A 196 TYR A 199 -1 O LEU A 196 N ASP A 160 SHEET 1 AA4 7 LEU A 573 THR A 574 0 SHEET 2 AA4 7 VAL A 595 ALA A 597 1 O ALA A 597 N LEU A 573 SHEET 3 AA4 7 ARG A 544 THR A 549 1 N THR A 549 O TYR A 596 SHEET 4 AA4 7 VAL A 330 THR A 333 1 N ILE A 331 O VAL A 546 SHEET 5 AA4 7 THR A 618 GLY A 622 1 O ALA A 619 N CYS A 332 SHEET 6 AA4 7 ILE A 636 MET A 640 1 O VAL A 638 N MET A 620 SHEET 7 AA4 7 ILE A 654 LEU A 655 1 O LEU A 655 N ALA A 639 SHEET 1 AA5 6 THR A 345 TYR A 350 0 SHEET 2 AA5 6 VAL A 516 ILE A 524 -1 O LEU A 520 N TYR A 350 SHEET 3 AA5 6 LEU A 493 LYS A 498 -1 N TYR A 497 O VAL A 516 SHEET 4 AA5 6 ASN A 442 GLY A 449 -1 N MET A 445 O LYS A 498 SHEET 5 AA5 6 LEU A 432 PHE A 439 -1 N HIS A 437 O ALA A 444 SHEET 6 AA5 6 GLU A 423 ILE A 424 -1 N ILE A 424 O SER A 434 SHEET 1 AA6 3 THR A 345 TYR A 350 0 SHEET 2 AA6 3 VAL A 516 ILE A 524 -1 O LEU A 520 N TYR A 350 SHEET 3 AA6 3 TYR A 460 VAL A 461 1 N TYR A 460 O LEU A 517 LINK C THR A 333 N PHD A 334 1555 1555 1.33 LINK C PHD A 334 N LYS A 335 1555 1555 1.33 LINK O VAL A 287 CA CA A1001 1555 1555 2.36 LINK O ALA A 288 CA CA A1001 1555 1555 2.41 LINK O ILE A 290 CA CA A1001 1555 1555 2.37 LINK OD2 PHD A 334 MG MG A1002 1555 1555 2.32 LINK OP2 PHD A 334 MG MG A1002 1555 1555 1.98 LINK O THR A 336 MG MG A1002 1555 1555 2.01 LINK OD2 ASP A 720 CA CA A1001 1555 1555 2.35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 HETATM 5141 N PHD A 334 162.452 151.702 177.620 1.00 79.69 N HETATM 5142 CA PHD A 334 162.487 152.491 178.844 1.00 79.69 C HETATM 5143 C PHD A 334 161.744 151.826 180.008 1.00 79.69 C HETATM 5144 O PHD A 334 160.591 152.217 180.322 1.00 79.69 O HETATM 5145 CB PHD A 334 161.896 153.876 178.571 1.00 79.69 C HETATM 5146 CG PHD A 334 161.713 154.646 179.879 1.00 79.69 C HETATM 5147 OD1 PHD A 334 162.897 154.895 180.581 1.00 79.69 O HETATM 5148 OD2 PHD A 334 160.654 155.005 180.268 1.00 79.69 O HETATM 5149 P PHD A 334 162.811 155.091 182.157 1.00 79.69 P HETATM 5150 OP1 PHD A 334 162.602 153.751 182.818 1.00 79.69 O HETATM 5151 OP2 PHD A 334 161.661 156.009 182.497 1.00 79.69 O HETATM 5152 OP3 PHD A 334 164.100 155.688 182.662 1.00 79.69 O HETATM 5153 H PHD A 334 161.615 151.447 177.458 1.00 79.69 H HETATM 5154 HA PHD A 334 163.413 152.603 179.105 1.00 79.69 H HETATM 5155 HB2 PHD A 334 161.036 153.777 178.134 1.00 79.69 H HETATM 5156 HB3 PHD A 334 162.494 154.372 177.990 1.00 79.69 H TER 13614 LYS A 880 HETATM13615 CA CA A1001 154.194 158.840 133.020 1.00 87.25 CA HETATM13616 MG MG A1002 159.844 155.224 182.435 1.00 80.49 MG CONECT 443613615 CONECT 445213615 CONECT 447213615 CONECT 5129 5141 CONECT 5141 5129 5142 5153 CONECT 5142 5141 5143 5145 5154 CONECT 5143 5142 5144 5157 CONECT 5144 5143 CONECT 5145 5142 5146 5155 5156 CONECT 5146 5145 5147 5148 CONECT 5147 5146 5149 CONECT 5148 514613616 CONECT 5149 5147 5150 5151 5152 CONECT 5150 5149 CONECT 5151 514913616 CONECT 5152 5149 CONECT 5153 5141 CONECT 5154 5142 CONECT 5155 5145 CONECT 5156 5145 CONECT 5157 5143 CONECT 518213616 CONECT1113313615 CONECT13615 4436 4452 447211133 CONECT13616 5148 5151 5182 MASTER 237 0 3 37 24 0 0 6 6716 1 25 71 END