HEADER SUGAR BINDING PROTEIN 11-SEP-24 9GRJ TITLE CRYSTAL STRUCTURE OF X409 COMPLEXED TO PENTA-TN-GLYCOPEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLOPROTEASE STCE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MUCINASE,NEUTRAL ZINC METALLOPROTEASE STCE,SECRETED PROTEASE COMPND 5 OF C1 ESTERASE INHIBITOR FROM EHEC; COMPND 6 EC: 3.4.24.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PENTA-TN-GLYCOPEPTIDE; COMPND 10 CHAIN: M; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: STCE, TAGA, L7031, ECO57PM83; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS MUCIN BINDING MODULE, MUCIN, O-GLYCANS, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.VELOZ,V.TALEB,R.HURTADO-GUERRERO REVDAT 1 24-DEC-25 9GRJ 0 JRNL AUTH T.JAROENTOMEECHAI,B.VELOZ,C.O.SOARES,F.GOERDELER,A.S.GROSSO, JRNL AUTH 2 C.BULL,R.L.MILLER,S.FURUKAWA,I.GINES-ALCOBER,V.TALEB, JRNL AUTH 3 P.MERINO,M.GHIRARDELLO,I.COMPANON,H.COELHO,J.S.DIAS, JRNL AUTH 4 R.VINCENTELLI,B.HENRISSAT,H.JOSHI,H.CLAUSEN,F.CORZANA, JRNL AUTH 5 F.MARCELO,R.HURTADO-GUERRERO,Y.NARIMATSU JRNL TITL MICROBIAL BINDING MODULE EMPLOYS SOPHISTICATED CLUSTERED JRNL TITL 2 SACCHARIDE PATCHES TO SELECTIVELY ADHERE TO MUCINS. JRNL REF NAT COMMUN V. 16 9058 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 41083434 JRNL DOI 10.1038/S41467-025-63756-W REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 36054 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1552 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2581 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.3700 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 857 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 99 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.72000 REMARK 3 B22 (A**2) : -0.87000 REMARK 3 B33 (A**2) : -0.85000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.041 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.045 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.040 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.967 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 982 ; 0.015 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 927 ; 0.004 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1335 ; 2.011 ; 1.820 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2156 ; 0.896 ; 1.832 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 103 ; 8.258 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 5 ; 7.171 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 141 ;14.903 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 160 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1039 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 206 ; 0.001 ; 0.021 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 403 ; 1.647 ; 1.763 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 403 ; 1.640 ; 1.763 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 503 ; 2.364 ; 3.161 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 504 ; 2.361 ; 3.162 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 579 ; 3.468 ; 2.296 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 580 ; 3.466 ; 2.304 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 831 ; 5.012 ; 4.037 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1078 ; 6.453 ;21.500 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1079 ; 6.451 ;21.530 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9GRJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1292141689. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37653 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 70.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.26 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POLYETHYLENE GLYCOL MONOMETHYL ETHER REMARK 280 5,000 DI-SODIUM HYDROGEN PHOSPHATE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 35.49550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.49650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.49550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 18.49650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA M 1 REMARK 465 GLU M 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA M 3 N CA CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 835 CB - CA - C ANGL. DEV. = -15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR M 5 57.53 -92.40 REMARK 500 REMARK 500 REMARK: NULL DBREF 9GRJ A 799 898 UNP O82882 STCE_ECO57 799 898 DBREF 9GRJ M 1 13 PDB 9GRJ 9GRJ 1 13 SEQRES 1 A 100 ALA LEU PRO ALA LYS GLU ASN GLU GLY CYS ILE VAL SER SEQRES 2 A 100 VAL ASN SER GLY LYS ARG TYR CYS LEU PRO VAL GLY GLN SEQRES 3 A 100 ARG SER GLY TYR SER LEU PRO ASP TRP ILE VAL GLY GLN SEQRES 4 A 100 GLU VAL TYR VAL ASP SER GLY ALA LYS ALA LYS VAL LEU SEQRES 5 A 100 LEU SER ASP TRP ASP ASN LEU SER TYR ASN ARG ILE GLY SEQRES 6 A 100 GLU PHE VAL GLY ASN VAL ASN PRO ALA ASP MET LYS LYS SEQRES 7 A 100 VAL LYS ALA TRP ASN GLY GLN TYR LEU ASP PHE SER LYS SEQRES 8 A 100 PRO ARG SER MET ARG VAL VAL TYR LYS SEQRES 1 M 13 ALA GLU ALA PRO THR THR SER THR THR SER ALA PRO LYS HET GOL A 901 6 HET GOL A 902 6 HET GOL A 903 6 HET A2G M 101 14 HET A2G M 102 14 HET A2G M 103 14 HET A2G M 104 14 HET A2G M 105 14 HET GOL M 106 6 HETNAM GOL GLYCEROL HETNAM A2G 2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN A2G N-ACETYL-ALPHA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 A2G ALPHA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 A2G ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-2-DEOXY-2-AMINO- HETSYN 4 A2G GALACTOSE FORMUL 3 GOL 4(C3 H8 O3) FORMUL 6 A2G 5(C8 H15 N O6) FORMUL 12 HOH *99(H2 O) HELIX 1 AA1 TRP A 854 SER A 858 5 5 HELIX 2 AA2 ASN A 870 MET A 874 5 5 SHEET 1 AA1 4 ARG A 817 PRO A 821 0 SHEET 2 AA1 4 GLU A 806 SER A 811 -1 N ILE A 809 O TYR A 818 SHEET 3 AA1 4 VAL A 839 SER A 843 -1 O ASP A 842 N CYS A 808 SHEET 4 AA1 4 ASN A 868 VAL A 869 -1 O VAL A 869 N VAL A 841 SHEET 1 AA2 3 GLY A 863 PHE A 865 0 SHEET 2 AA2 3 ALA A 847 SER A 852 -1 N VAL A 849 O PHE A 865 SHEET 3 AA2 3 SER A 892 TYR A 897 -1 O ARG A 894 N LEU A 850 SHEET 1 AA3 2 VAL A 877 LYS A 878 0 SHEET 2 AA3 2 TYR A 884 LEU A 885 -1 O LEU A 885 N VAL A 877 SSBOND 1 CYS A 808 CYS A 819 1555 1555 2.20 LINK OG1 THR M 5 C1 A2G M 101 1555 1555 1.40 LINK OG1 THR M 6 C1 A2G M 102 1555 1555 1.29 LINK OG SER M 7 C1 A2G M 103 1555 1555 1.39 LINK OG1 THR M 8 C1 A2G M 104 1555 1555 1.43 LINK OG1 THR M 9 C1 A2G M 105 1555 1555 1.40 CRYST1 70.991 36.993 44.902 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014086 0.000000 0.000000 0.00000 SCALE2 0.000000 0.027032 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022271 0.00000 TER 796 LYS A 898 TER 868 LYS M 13 HETATM 869 C1 GOL A 901 11.356 17.266 15.501 1.00 23.86 C HETATM 870 O1 GOL A 901 10.232 17.908 16.098 1.00 45.16 O HETATM 871 C2 GOL A 901 11.560 17.680 14.067 1.00 18.65 C HETATM 872 O2 GOL A 901 10.591 17.120 13.161 1.00 29.24 O HETATM 873 C3 GOL A 901 12.927 17.350 13.540 1.00 30.04 C HETATM 874 O3 GOL A 901 12.903 17.144 12.132 1.00 43.29 O HETATM 875 C1 GOL A 902 18.898 3.913 25.869 1.00 49.22 C HETATM 876 O1 GOL A 902 17.748 3.211 26.329 1.00 53.49 O HETATM 877 C2 GOL A 902 19.661 3.118 24.831 1.00 49.61 C HETATM 878 O2 GOL A 902 18.816 2.738 23.748 1.00 40.48 O HETATM 879 C3 GOL A 902 20.822 3.874 24.243 1.00 50.08 C HETATM 880 O3 GOL A 902 20.601 4.097 22.859 1.00 42.32 O HETATM 881 C1 GOL A 903 -0.372 -2.472 19.444 1.00 24.18 C HETATM 882 O1 GOL A 903 -1.164 -1.348 19.077 1.00 22.63 O HETATM 883 C2 GOL A 903 1.097 -2.146 19.454 1.00 24.73 C HETATM 884 O2 GOL A 903 1.337 -1.073 20.358 1.00 25.60 O HETATM 885 C3 GOL A 903 1.932 -3.349 19.834 1.00 27.08 C HETATM 886 O3 GOL A 903 3.326 -3.135 19.636 1.00 30.75 O HETATM 887 O5 A2G M 101 9.438 17.231 25.102 1.00 25.63 O HETATM 888 C1 A2G M 101 9.525 15.810 24.829 1.00 28.34 C HETATM 889 C2 A2G M 101 10.679 15.181 25.615 1.00 30.08 C HETATM 890 N2 A2G M 101 10.647 13.711 25.386 1.00 33.83 N HETATM 891 C3 A2G M 101 10.570 15.575 27.136 1.00 27.24 C HETATM 892 O3 A2G M 101 11.691 15.026 27.830 1.00 34.67 O HETATM 893 C4 A2G M 101 10.453 17.114 27.304 1.00 27.18 C HETATM 894 O4 A2G M 101 11.600 17.752 26.689 1.00 27.18 O HETATM 895 C5 A2G M 101 9.262 17.554 26.510 1.00 24.67 C HETATM 896 C6 A2G M 101 8.974 19.031 26.686 1.00 26.36 C HETATM 897 O6 A2G M 101 8.623 19.256 28.029 1.00 22.73 O HETATM 898 C7 A2G M 101 11.325 13.094 24.369 1.00 35.87 C HETATM 899 O7 A2G M 101 12.057 13.683 23.572 1.00 30.76 O HETATM 900 C8 A2G M 101 11.126 11.561 24.269 1.00 32.99 C HETATM 901 O5 A2G M 102 5.589 7.428 22.527 1.00 23.47 O HETATM 902 C1 A2G M 102 5.141 8.800 22.200 1.00 23.32 C HETATM 903 C2 A2G M 102 3.692 9.050 22.663 1.00 23.16 C HETATM 904 N2 A2G M 102 3.390 10.433 22.367 1.00 26.97 N HETATM 905 C3 A2G M 102 3.648 8.670 24.169 1.00 26.27 C HETATM 906 O3 A2G M 102 2.297 8.743 24.607 1.00 32.80 O HETATM 907 C4 A2G M 102 4.161 7.244 24.477 1.00 28.46 C HETATM 908 O4 A2G M 102 3.279 6.264 23.848 1.00 31.17 O HETATM 909 C5 A2G M 102 5.596 7.158 23.990 1.00 25.73 C HETATM 910 C6 A2G M 102 6.188 5.773 24.098 1.00 26.95 C HETATM 911 O6 A2G M 102 6.364 5.449 25.520 1.00 32.59 O HETATM 912 C7 A2G M 102 2.161 10.818 22.033 1.00 28.35 C HETATM 913 O7 A2G M 102 1.185 10.050 21.965 1.00 31.66 O HETATM 914 C8 A2G M 102 2.094 12.275 21.659 1.00 29.65 C HETATM 915 O5 A2G M 103 8.355 12.265 14.379 1.00 15.14 O HETATM 916 C1 A2G M 103 9.148 11.711 15.433 1.00 14.88 C HETATM 917 C2 A2G M 103 10.432 12.459 15.589 1.00 15.12 C HETATM 918 N2 A2G M 103 11.248 11.904 16.673 1.00 14.14 N HETATM 919 C3 A2G M 103 10.126 13.993 15.858 1.00 15.51 C HETATM 920 O3 A2G M 103 11.399 14.699 15.917 1.00 16.53 O HETATM 921 C4 A2G M 103 9.222 14.504 14.759 1.00 15.00 C HETATM 922 O4 A2G M 103 9.938 14.541 13.506 1.00 16.51 O HETATM 923 C5 A2G M 103 7.999 13.658 14.677 1.00 14.85 C HETATM 924 C6 A2G M 103 7.009 14.032 13.553 1.00 15.73 C HETATM 925 O6 A2G M 103 5.767 13.333 13.667 1.00 17.24 O HETATM 926 C7 A2G M 103 12.570 11.672 16.504 1.00 15.12 C HETATM 927 O7 A2G M 103 13.167 11.965 15.462 1.00 16.58 O HETATM 928 C8 A2G M 103 13.259 11.058 17.679 1.00 16.94 C HETATM 929 O5 A2G M 104 -0.379 10.073 17.447 1.00 25.04 O HETATM 930 C1 A2G M 104 0.647 10.094 16.421 1.00 22.48 C HETATM 931 C2 A2G M 104 0.533 11.399 15.575 1.00 24.99 C HETATM 932 N2 A2G M 104 1.628 11.458 14.576 1.00 21.32 N HETATM 933 C3 A2G M 104 0.574 12.620 16.479 1.00 26.65 C HETATM 934 O3 A2G M 104 0.348 13.801 15.644 1.00 28.02 O HETATM 935 C4 A2G M 104 -0.438 12.521 17.595 1.00 27.34 C HETATM 936 O4 A2G M 104 -1.776 12.539 16.978 1.00 29.73 O HETATM 937 C5 A2G M 104 -0.239 11.192 18.351 1.00 26.08 C HETATM 938 C6 A2G M 104 -1.362 10.938 19.365 1.00 29.70 C HETATM 939 O6 A2G M 104 -0.962 10.043 20.352 1.00 34.80 O HETATM 940 C7 A2G M 104 1.443 11.165 13.326 1.00 22.33 C HETATM 941 O7 A2G M 104 0.368 10.704 12.874 1.00 26.74 O HETATM 942 C8 A2G M 104 2.599 11.325 12.420 1.00 22.84 C HETATM 943 O5 A2G M 105 2.381 2.540 12.921 1.00 16.19 O HETATM 944 C1 A2G M 105 1.493 3.381 13.690 1.00 15.81 C HETATM 945 C2 A2G M 105 0.725 2.582 14.713 1.00 16.36 C HETATM 946 N2 A2G M 105 -0.091 3.461 15.559 1.00 19.00 N HETATM 947 C3 A2G M 105 1.686 1.775 15.602 1.00 16.19 C HETATM 948 O3 A2G M 105 0.961 0.942 16.515 1.00 18.41 O HETATM 949 C4 A2G M 105 2.590 0.918 14.731 1.00 15.81 C HETATM 950 O4 A2G M 105 1.828 -0.051 13.989 1.00 16.96 O HETATM 951 C5 A2G M 105 3.318 1.817 13.726 1.00 16.65 C HETATM 952 C6 A2G M 105 4.163 1.045 12.737 1.00 16.80 C HETATM 953 O6 A2G M 105 4.911 1.897 11.869 1.00 16.07 O HETATM 954 C7 A2G M 105 -1.435 3.398 15.562 1.00 19.77 C HETATM 955 O7 A2G M 105 -2.057 2.548 14.936 1.00 17.65 O HETATM 956 C8 A2G M 105 -2.108 4.455 16.413 1.00 18.91 C HETATM 957 C1 GOL M 106 -1.877 5.703 7.935 1.00 59.36 C HETATM 958 O1 GOL M 106 -2.201 7.076 8.117 1.00 67.92 O HETATM 959 C2 GOL M 106 -0.990 5.491 6.731 1.00 61.96 C HETATM 960 O2 GOL M 106 -1.477 4.383 5.974 1.00 57.14 O HETATM 961 C3 GOL M 106 0.459 5.271 7.103 1.00 62.05 C HETATM 962 O3 GOL M 106 1.320 5.546 6.001 1.00 66.70 O HETATM 963 O HOH A1001 15.100 17.687 12.581 1.00 49.58 O HETATM 964 O HOH A1002 22.312 -3.874 26.979 1.00 21.80 O HETATM 965 O HOH A1003 29.035 9.179 0.447 1.00 38.01 O HETATM 966 O HOH A1004 2.366 3.679 9.862 1.00 28.14 O HETATM 967 O HOH A1005 4.227 4.357 4.994 1.00 34.36 O HETATM 968 O HOH A1006 26.057 -8.956 18.223 1.00 34.43 O HETATM 969 O HOH A1007 21.702 -9.286 16.884 1.00 30.28 O HETATM 970 O HOH A1008 10.716 -3.195 10.564 1.00 25.77 O HETATM 971 O HOH A1009 28.413 -5.559 13.135 1.00 26.75 O HETATM 972 O HOH A1010 25.695 10.694 -0.255 1.00 44.30 O HETATM 973 O HOH A1011 7.709 4.267 1.631 1.00 30.33 O HETATM 974 O HOH A1012 16.787 -9.192 9.100 1.00 32.68 O HETATM 975 O HOH A1013 11.677 -1.728 -0.375 1.00 32.16 O HETATM 976 O HOH A1014 -0.432 6.591 19.119 1.00 23.41 O HETATM 977 O HOH A1015 31.251 3.214 8.766 1.00 31.47 O HETATM 978 O HOH A1016 20.851 1.620 20.895 1.00 20.78 O HETATM 979 O HOH A1017 13.612 -4.363 11.763 1.00 20.38 O HETATM 980 O HOH A1018 15.557 -10.272 11.631 1.00 36.95 O HETATM 981 O HOH A1019 25.316 4.906 20.852 1.00 38.98 O HETATM 982 O HOH A1020 9.983 8.334 19.412 1.00 17.80 O HETATM 983 O HOH A1021 13.124 -8.351 19.955 1.00 27.78 O HETATM 984 O HOH A1022 30.097 6.603 13.085 1.00 22.61 O HETATM 985 O HOH A1023 8.491 -4.489 14.581 1.00 29.08 O HETATM 986 O HOH A1024 18.079 -6.093 1.596 1.00 19.34 O HETATM 987 O HOH A1025 7.581 1.897 22.984 1.00 18.06 O HETATM 988 O HOH A1026 15.099 6.631 26.873 1.00 27.26 O HETATM 989 O HOH A1027 4.464 3.669 0.013 1.00 52.35 O HETATM 990 O HOH A1028 5.074 -4.986 18.586 1.00 33.46 O HETATM 991 O HOH A1029 15.982 -1.943 29.724 1.00 21.95 O HETATM 992 O HOH A1030 21.689 9.732 21.548 1.00 22.14 O HETATM 993 O HOH A1031 23.906 7.138 23.715 1.00 40.00 O HETATM 994 O HOH A1032 11.971 8.872 3.641 1.00 23.58 O HETATM 995 O HOH A1033 24.899 11.585 19.549 1.00 24.63 O HETATM 996 O HOH A1034 4.553 -1.960 21.832 1.00 33.46 O HETATM 997 O HOH A1035 23.648 12.293 2.364 1.00 32.42 O HETATM 998 O HOH A1036 27.970 2.865 2.007 1.00 33.63 O HETATM 999 O HOH A1037 11.759 10.021 21.025 1.00 20.44 O HETATM 1000 O HOH A1038 11.747 -5.217 16.776 1.00 22.90 O HETATM 1001 O HOH A1039 14.517 -10.426 0.587 1.00 23.38 O HETATM 1002 O HOH A1040 12.980 3.827 28.401 1.00 36.81 O HETATM 1003 O HOH A1041 4.233 2.123 6.386 1.00 29.49 O HETATM 1004 O HOH A1042 30.481 14.087 15.965 1.00 29.39 O HETATM 1005 O HOH A1043 6.376 12.524 9.819 1.00 27.94 O HETATM 1006 O HOH A1044 15.290 -10.269 16.648 1.00 34.80 O HETATM 1007 O HOH A1045 27.849 8.970 20.455 1.00 38.61 O HETATM 1008 O HOH A1046 29.050 -4.259 5.934 1.00 38.87 O HETATM 1009 O HOH A1047 13.340 -6.710 25.149 1.00 18.07 O HETATM 1010 O HOH A1048 23.187 16.261 15.158 1.00 25.66 O HETATM 1011 O HOH A1049 34.277 12.855 4.652 1.00 36.12 O HETATM 1012 O HOH A1050 25.239 -9.558 9.405 1.00 31.82 O HETATM 1013 O HOH A1051 13.082 -13.251 19.051 1.00 44.93 O HETATM 1014 O HOH A1052 6.748 11.953 5.238 1.00 29.40 O HETATM 1015 O HOH A1053 25.312 18.057 8.157 1.00 41.01 O HETATM 1016 O HOH A1054 9.134 6.239 -2.064 1.00 29.35 O HETATM 1017 O HOH A1055 21.708 -7.200 18.510 1.00 27.39 O HETATM 1018 O HOH A1056 18.866 14.989 12.975 1.00 16.52 O HETATM 1019 O HOH A1057 15.849 -7.661 2.605 1.00 21.71 O HETATM 1020 O HOH A1058 25.076 -5.013 0.411 1.00 28.12 O HETATM 1021 O HOH A1059 22.389 -10.965 5.752 1.00 35.68 O HETATM 1022 O HOH A1060 11.539 2.231 29.400 1.00 36.72 O HETATM 1023 O HOH A1061 9.223 -3.319 7.606 1.00 32.51 O HETATM 1024 O HOH A1062 6.155 -4.659 15.631 1.00 25.93 O HETATM 1025 O HOH A1063 14.973 16.272 8.131 1.00 27.57 O HETATM 1026 O HOH A1064 6.142 0.203 21.378 1.00 23.36 O HETATM 1027 O HOH A1065 33.521 9.034 7.243 1.00 29.58 O HETATM 1028 O HOH A1066 8.064 7.095 1.967 1.00 46.66 O HETATM 1029 O HOH A1067 6.860 8.705 3.926 1.00 25.51 O HETATM 1030 O HOH A1068 9.399 4.858 26.183 1.00 27.98 O HETATM 1031 O HOH A1069 -3.388 -1.406 21.264 1.00 46.39 O HETATM 1032 O HOH A1070 25.813 -6.871 5.158 1.00 36.18 O HETATM 1033 O HOH A1071 25.517 -6.029 -2.230 1.00 36.00 O HETATM 1034 O HOH A1072 33.355 2.609 9.681 1.00 47.28 O HETATM 1035 O HOH A1073 22.274 10.598 -0.561 1.00 44.82 O HETATM 1036 O HOH A1074 26.707 -4.550 -4.207 1.00 39.07 O HETATM 1037 O HOH A1075 9.985 -6.691 22.713 1.00 45.35 O HETATM 1038 O HOH A1076 16.495 -10.470 3.983 1.00 41.71 O HETATM 1039 O HOH A1077 10.433 3.497 -5.882 1.00 39.67 O HETATM 1040 O HOH A1078 22.918 18.795 13.883 1.00 29.85 O HETATM 1041 O HOH A1079 15.216 0.614 30.642 1.00 30.65 O HETATM 1042 O HOH M 201 9.778 14.095 20.325 1.00 34.55 O HETATM 1043 O HOH M 202 -6.602 2.110 3.499 1.00 44.76 O HETATM 1044 O HOH M 203 13.106 15.796 22.556 1.00 22.04 O HETATM 1045 O HOH M 204 13.336 12.060 21.912 1.00 24.78 O HETATM 1046 O HOH M 205 -0.115 10.329 10.276 1.00 37.98 O HETATM 1047 O HOH M 206 4.262 14.601 11.856 1.00 34.19 O HETATM 1048 O HOH M 207 1.484 14.909 13.485 1.00 44.84 O HETATM 1049 O HOH M 208 6.090 18.442 28.692 1.00 36.42 O HETATM 1050 O HOH M 209 0.015 2.212 10.243 1.00 21.14 O HETATM 1051 O HOH M 210 12.295 18.376 24.082 1.00 32.48 O HETATM 1052 O HOH M 211 -2.463 7.865 15.705 1.00 24.76 O HETATM 1053 O HOH M 212 4.250 12.206 15.720 1.00 18.72 O HETATM 1054 O HOH M 213 0.160 7.421 21.661 1.00 38.99 O HETATM 1055 O HOH M 214 -4.469 6.369 14.254 1.00 25.35 O HETATM 1056 O HOH M 215 10.129 11.471 19.450 1.00 22.06 O HETATM 1057 O HOH M 216 3.928 13.155 18.337 1.00 28.43 O HETATM 1058 O HOH M 217 2.914 16.050 15.260 1.00 53.65 O HETATM 1059 O HOH M 218 -0.009 1.609 7.528 1.00 35.09 O HETATM 1060 O HOH M 219 7.844 15.319 18.719 1.00 45.68 O HETATM 1061 O HOH M 220 -3.092 7.084 18.295 1.00 39.89 O CONECT 70 158 CONECT 158 70 CONECT 811 888 CONECT 818 902 CONECT 825 916 CONECT 831 930 CONECT 838 944 CONECT 869 870 871 CONECT 870 869 CONECT 871 869 872 873 CONECT 872 871 CONECT 873 871 874 CONECT 874 873 CONECT 875 876 877 CONECT 876 875 CONECT 877 875 878 879 CONECT 878 877 CONECT 879 877 880 CONECT 880 879 CONECT 881 882 883 CONECT 882 881 CONECT 883 881 884 885 CONECT 884 883 CONECT 885 883 886 CONECT 886 885 CONECT 887 888 895 CONECT 888 811 887 889 CONECT 889 888 890 891 CONECT 890 889 898 CONECT 891 889 892 893 CONECT 892 891 CONECT 893 891 894 895 CONECT 894 893 CONECT 895 887 893 896 CONECT 896 895 897 CONECT 897 896 CONECT 898 890 899 900 CONECT 899 898 CONECT 900 898 CONECT 901 902 909 CONECT 902 818 901 903 CONECT 903 902 904 905 CONECT 904 903 912 CONECT 905 903 906 907 CONECT 906 905 CONECT 907 905 908 909 CONECT 908 907 CONECT 909 901 907 910 CONECT 910 909 911 CONECT 911 910 CONECT 912 904 913 914 CONECT 913 912 CONECT 914 912 CONECT 915 916 923 CONECT 916 825 915 917 CONECT 917 916 918 919 CONECT 918 917 926 CONECT 919 917 920 921 CONECT 920 919 CONECT 921 919 922 923 CONECT 922 921 CONECT 923 915 921 924 CONECT 924 923 925 CONECT 925 924 CONECT 926 918 927 928 CONECT 927 926 CONECT 928 926 CONECT 929 930 937 CONECT 930 831 929 931 CONECT 931 930 932 933 CONECT 932 931 940 CONECT 933 931 934 935 CONECT 934 933 CONECT 935 933 936 937 CONECT 936 935 CONECT 937 929 935 938 CONECT 938 937 939 CONECT 939 938 CONECT 940 932 941 942 CONECT 941 940 CONECT 942 940 CONECT 943 944 951 CONECT 944 838 943 945 CONECT 945 944 946 947 CONECT 946 945 954 CONECT 947 945 948 949 CONECT 948 947 CONECT 949 947 950 951 CONECT 950 949 CONECT 951 943 949 952 CONECT 952 951 953 CONECT 953 952 CONECT 954 946 955 956 CONECT 955 954 CONECT 956 954 CONECT 957 958 959 CONECT 958 957 CONECT 959 957 960 961 CONECT 960 959 CONECT 961 959 962 CONECT 962 961 MASTER 293 0 9 2 9 0 0 6 1050 2 101 9 END