HEADER ENDOCYTOSIS 12-NOV-24 9HDB TITLE SLA1 SH3_3 DOMAIN (RESIDUES 355-414) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN CYTOSKELETON-REGULATORY COMPLEX PROTEIN SLA1; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: RESIDUES 355-414 OF SLA1. PURIFIED FROM AN N-TERMINAL COMPND 6 GST FUSION CONSTRUCT LEAVING THE GAMA SEQUENCE PRIOR TO THE DOMAIN OF COMPND 7 INTEREST AFTER TEV CLEAVAGE. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: SLA1, YBL007C, YBL0321; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETM30 KEYWDS SH3 DOMAIN, MEMBRANE TRAFFICKING, ENDOCYTOSIS, PROTEIN-PROTEIN KEYWDS 2 INTERACTION EXPDTA X-RAY DIFFRACTION AUTHOR G.DRAPER-BARR,L.A.DEFELIPE,D.RUIZ-CARILLO,M.M.GARCIA-ALAI REVDAT 2 16-JUL-25 9HDB 1 JRNL REVDAT 1 21-MAY-25 9HDB 0 JRNL AUTH G.DRAPER-BARR,L.A.DEFELIPE,D.RUIZ-CARRILLO,E.GUSTAVSSON, JRNL AUTH 2 M.LANDAU,M.GARCIA-ALAI JRNL TITL SLA2 IS A CORE INTERACTION HUB FOR CLATHRIN LIGHT CHAIN AND JRNL TITL 2 THE PAN1/END3/SLA1 COMPLEX. JRNL REF STRUCTURE V. 33 1193 2025 JRNL REFN ISSN 0969-2126 JRNL PMID 40347949 JRNL DOI 10.1016/J.STR.2025.04.013 REMARK 2 REMARK 2 RESOLUTION. 1.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 (REFMACAT 0.4.88) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17083 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.964 REMARK 3 FREE R VALUE TEST SET COUNT : 848 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.49 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.53 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1180 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.1290 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.2110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 982 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 111 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.91500 REMARK 3 B22 (A**2) : 0.22600 REMARK 3 B33 (A**2) : 0.68900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.090 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.075 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.044 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.543 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1007 ; 0.015 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 967 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1354 ; 1.965 ; 1.809 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2244 ; 0.664 ; 1.809 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 123 ; 6.153 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 4 ;26.048 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 195 ;13.145 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 143 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1169 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 215 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 125 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 64 ; 0.155 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 470 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 62 ; 0.156 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 495 ; 4.400 ; 1.092 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 495 ; 4.375 ; 1.091 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 617 ; 5.992 ; 1.963 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 618 ; 5.995 ; 1.964 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 512 ; 6.214 ; 1.322 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 513 ; 6.208 ; 1.321 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 737 ; 8.545 ; 2.334 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 738 ; 8.540 ; 2.332 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1974 ; 5.644 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : B A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 6 B 63 NULL REMARK 3 1 A 6 A 63 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Bp 1 Bp 64 REMARK 3 ORIGIN FOR THE GROUP (A): -9.7501 -5.2405 -9.1819 REMARK 3 T TENSOR REMARK 3 T11: 0.0084 T22: 0.0188 REMARK 3 T33: 0.0049 T12: 0.0012 REMARK 3 T13: 0.0013 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 1.9328 L22: 2.6627 REMARK 3 L33: 2.3278 L12: 0.3527 REMARK 3 L13: 0.0737 L23: 0.0752 REMARK 3 S TENSOR REMARK 3 S11: 0.0181 S12: -0.0679 S13: 0.0255 REMARK 3 S21: 0.0303 S22: 0.0016 S23: -0.0761 REMARK 3 S31: 0.0537 S32: 0.0542 S33: -0.0197 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Ap 6 Ap 64 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8075 -6.9381 -16.8640 REMARK 3 T TENSOR REMARK 3 T11: 0.0064 T22: 0.0045 REMARK 3 T33: 0.0111 T12: 0.0019 REMARK 3 T13: 0.0001 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 3.3624 L22: 2.6116 REMARK 3 L33: 3.3646 L12: 0.2839 REMARK 3 L13: -0.3691 L23: 0.5613 REMARK 3 S TENSOR REMARK 3 S11: 0.0186 S12: -0.0117 S13: 0.1837 REMARK 3 S21: 0.0057 S22: -0.0290 S23: 0.0646 REMARK 3 S31: -0.1388 S32: -0.0731 S33: 0.0104 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9HDB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-NOV-24. REMARK 100 THE DEPOSITION ID IS D_1292142889. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17131 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.490 REMARK 200 RESOLUTION RANGE LOW (A) : 51.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 8.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 51.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.07100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 24.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.5 20% PEG 10000 1MM REMARK 280 PEPTIDE (PVSTPARTPARTPTP) DISSOLVED IN 0.03M HEPES PH 8, 0.15M REMARK 280 NACL, 0.5MM TCEP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.26650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.98350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.21150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 25.98350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.26650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.21150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ALA A 2 REMARK 465 MET A 3 REMARK 465 ALA A 4 REMARK 465 LYS A 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 6 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ALA A 16 HG1 THR A 23 1.34 REMARK 500 O HOH A 102 O HOH A 139 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 64 CG - CD - NE ANGL. DEV. = -14.8 DEGREES REMARK 500 ARG B 64 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 64 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 49 -35.10 136.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 64 0.26 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 9HDB B 5 64 UNP P32790 SLA1_YEAST 355 414 DBREF 9HDB A 5 64 UNP P32790 SLA1_YEAST 355 414 SEQADV 9HDB GLY B 1 UNP P32790 EXPRESSION TAG SEQADV 9HDB ALA B 2 UNP P32790 EXPRESSION TAG SEQADV 9HDB MET B 3 UNP P32790 EXPRESSION TAG SEQADV 9HDB ALA B 4 UNP P32790 EXPRESSION TAG SEQADV 9HDB GLY A 1 UNP P32790 EXPRESSION TAG SEQADV 9HDB ALA A 2 UNP P32790 EXPRESSION TAG SEQADV 9HDB MET A 3 UNP P32790 EXPRESSION TAG SEQADV 9HDB ALA A 4 UNP P32790 EXPRESSION TAG SEQRES 1 B 64 GLY ALA MET ALA LYS LYS ARG GLY ILE VAL GLN TYR ASP SEQRES 2 B 64 PHE MET ALA GLU SER GLN ASP GLU LEU THR ILE LYS SER SEQRES 3 B 64 GLY ASP LYS VAL TYR ILE LEU ASP ASP LYS LYS SER LYS SEQRES 4 B 64 ASP TRP TRP MET CYS GLN LEU VAL ASP SER GLY LYS SER SEQRES 5 B 64 GLY LEU VAL PRO ALA GLN PHE ILE GLU PRO VAL ARG SEQRES 1 A 64 GLY ALA MET ALA LYS LYS ARG GLY ILE VAL GLN TYR ASP SEQRES 2 A 64 PHE MET ALA GLU SER GLN ASP GLU LEU THR ILE LYS SER SEQRES 3 A 64 GLY ASP LYS VAL TYR ILE LEU ASP ASP LYS LYS SER LYS SEQRES 4 A 64 ASP TRP TRP MET CYS GLN LEU VAL ASP SER GLY LYS SER SEQRES 5 A 64 GLY LEU VAL PRO ALA GLN PHE ILE GLU PRO VAL ARG FORMUL 3 HOH *111(H2 O) SHEET 1 AA1 5 SER B 52 PRO B 56 0 SHEET 2 AA1 5 TRP B 41 LEU B 46 -1 N CYS B 44 O GLY B 53 SHEET 3 AA1 5 LYS B 29 ASP B 34 -1 N TYR B 31 O GLN B 45 SHEET 4 AA1 5 ARG B 7 VAL B 10 -1 N GLY B 8 O VAL B 30 SHEET 5 AA1 5 ILE B 60 VAL B 63 -1 O GLU B 61 N ILE B 9 SHEET 1 AA2 5 SER A 52 PRO A 56 0 SHEET 2 AA2 5 TRP A 41 LEU A 46 -1 N CYS A 44 O GLY A 53 SHEET 3 AA2 5 LYS A 29 ASP A 34 -1 N TYR A 31 O GLN A 45 SHEET 4 AA2 5 ARG A 7 VAL A 10 -1 N GLY A 8 O VAL A 30 SHEET 5 AA2 5 ILE A 60 PRO A 62 -1 O GLU A 61 N ILE A 9 CRYST1 38.533 50.423 51.967 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025952 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019832 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019243 0.00000 MASTER 370 0 0 0 10 0 0 6 1093 2 0 10 END