HEADER CELL ADHESION 12-NOV-24 9HDI TITLE N-TERMINALLY TRUNCATED CANA FROM PYRODICTIUM ABYSSI - K1-CANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CANNULAE FORMING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: N-TERMINALLY TRUNCATED CONSTRUCT OF CANA (K1-CANA) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYRODICTIUM ABYSSI; SOURCE 3 ORGANISM_TAXID: 54256; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CANNULAE FORMING PROTEIN, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR C.E.MUNTE,H.R.KALBITZER,R.R.KREITNER,K.O.STETTER REVDAT 1 20-AUG-25 9HDI 0 JRNL AUTH C.E.MUNTE,R.KREITNER,R.RACHEL,K.O.STETTER,W.KREMER, JRNL AUTH 2 H.R.KALBITZER JRNL TITL BIOPHYSICAL CHARACTERIZATION AND SOLUTION STRUCTURE OF THE JRNL TITL 2 CANNULAE-FORMING PROTEIN CANA FROM THE HYPERTHERMOPHILIC JRNL TITL 3 ARCHAEON PYRODICTIUM ABYSSI. JRNL REF SCI REP V. 15 28563 2025 JRNL REFN ESSN 2045-2322 JRNL PMID 40764357 JRNL DOI 10.1038/S41598-025-13242-6 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.KREITNER,C.E.MUNTE,K.SINGER,K.O.STETTER,G.HORN,W.KREMER, REMARK 1 AUTH 2 H.R.KALBITZER REMARK 1 TITL COMPLETE SEQUENTIAL ASSIGNMENT AND SECONDARY STRUCTURE REMARK 1 TITL 2 PREDICTION OF THE CANNULAE FORMING PROTEIN CANA FROM THE REMARK 1 TITL 3 HYPERTHERMOPHILIC ARCHAEBACTERIUM PYRODICTIUM ABYSSI. REMARK 1 REF J. MOL. NMR 2020 REMARK 1 REFN ISSN 1874-2718 REMARK 1 DOI 10.1007/S12104-020-09934-X REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AUREMOL, CNS REMARK 3 AUTHORS : BRUKER BIOSPIN (AUREMOL), BRUNGER, ADAMS, CLORE, REMARK 3 GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9HDI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-NOV-24. REMARK 100 THE DEPOSITION ID IS D_1292143066. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 323 REMARK 210 PH : 6.6 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 500 UM K1-CANA, 20 MM SODIUM REMARK 210 PHOSPHATE, 1 MM EDTA, 2 MM REMARK 210 SODIUM AZIDE, 50 UM DSS, 95% H2O/ REMARK 210 5% D2O; 1.8 MM K1-CANA, 20 MM REMARK 210 SODIUM PHOSPHATE, 1 MM EDTA, 2 REMARK 210 MM SODIUM AZIDE, 50 UM DSS, 95% REMARK 210 H2O/5% D2O; 500 UM [U-13C; U-15N] REMARK 210 K1-CANA, 20 MM SODIUM PHOSPHATE, REMARK 210 1 MM EDTA, 2 MM SODIUM AZIDE, REMARK 210 50 UM DSS, 100% D2O; 500 UM [U- REMARK 210 13C; U-15N] K1-CANA, 20 MM REMARK 210 SODIUM PHOSPHATE, 1 MM EDTA, 2 REMARK 210 MM SODIUM AZIDE, 50 UM DSS, 95% REMARK 210 H2O/5% D2O; 400 UM K1-CANA, 20 REMARK 210 MM SODIUM PHOSPHATE, 1 MM EDTA, REMARK 210 2 MM SODIUM AZIDE, 50 UM DSS, 95% REMARK 210 H2O/5% D2O; 500 UM K1-CANA, 20 REMARK 210 MM SODIUM PHOSPHATE, 1 MM EDTA, REMARK 210 2 MM SODIUM AZIDE, 50 UM DSS, REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-1H TOCSY; REMARK 210 2D 1H-13C HSQC ALIPHATIC; 2D 1H- REMARK 210 13C HSQC AROMATIC; 2D 1H-15N REMARK 210 HSQC; 3D HNCO; 3D HNCA; 3D REMARK 210 CBCA(CO)NH; 3D CBCANH; 3D HCAN; REMARK 210 3D 1H-15N NOESY; 3D HCCH-TOCSY; REMARK 210 3D (HB)CB(CGCC-TOCSY)HAR; 3D (HB) REMARK 210 CB(CGCD)HD; 3D HNCO H-BONDS REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AUREMOL, CNS REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 PRO A 6 REMARK 465 LEU A 7 REMARK 465 ASN A 8 REMARK 465 SER A 9 REMARK 465 PHE A 10 REMARK 465 TYR A 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-10 REMARK 470 RES CSSEQI ATOMS REMARK 470 GLY A 183 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 16 76.10 60.04 REMARK 500 1 VAL A 19 161.33 52.52 REMARK 500 1 ALA A 38 -49.02 177.58 REMARK 500 1 GLN A 39 155.97 174.97 REMARK 500 1 ASP A 53 125.66 -174.83 REMARK 500 1 GLN A 54 117.26 18.70 REMARK 500 1 TYR A 128 137.09 83.49 REMARK 500 1 LYS A 141 59.25 -92.19 REMARK 500 2 THR A 13 101.95 52.66 REMARK 500 2 ALA A 16 75.81 -153.63 REMARK 500 2 VAL A 19 161.61 50.60 REMARK 500 2 SER A 20 108.61 60.17 REMARK 500 2 GLN A 39 148.44 -178.97 REMARK 500 2 GLN A 54 123.45 3.71 REMARK 500 2 ASN A 94 -166.91 -105.50 REMARK 500 2 LYS A 125 46.86 39.94 REMARK 500 2 LYS A 141 58.78 -91.91 REMARK 500 2 ASN A 146 -65.57 68.25 REMARK 500 2 ASP A 169 -87.91 -175.41 REMARK 500 3 ALA A 18 106.78 62.56 REMARK 500 3 VAL A 19 160.92 52.93 REMARK 500 3 PRO A 22 88.48 -1.00 REMARK 500 3 ALA A 35 27.72 -163.85 REMARK 500 3 ALA A 38 -50.36 -169.65 REMARK 500 3 GLN A 39 139.69 175.64 REMARK 500 3 GLN A 54 124.27 0.70 REMARK 500 3 ASN A 94 -169.60 79.78 REMARK 500 3 LYS A 125 75.15 52.80 REMARK 500 3 TYR A 128 163.83 52.79 REMARK 500 3 LYS A 141 59.58 -92.54 REMARK 500 3 ASP A 169 -88.90 -103.45 REMARK 500 4 ALA A 16 71.93 -153.17 REMARK 500 4 GLN A 17 -79.94 63.43 REMARK 500 4 ALA A 18 101.53 56.22 REMARK 500 4 SER A 20 76.22 51.44 REMARK 500 4 ALA A 36 129.03 59.94 REMARK 500 4 ALA A 38 -45.26 170.28 REMARK 500 4 ASP A 53 -153.47 -99.41 REMARK 500 4 ALA A 100 148.65 -170.26 REMARK 500 4 LYS A 125 70.22 31.60 REMARK 500 4 TYR A 128 133.37 79.02 REMARK 500 4 LYS A 141 58.64 -92.12 REMARK 500 4 ASN A 146 27.51 45.95 REMARK 500 4 ASP A 169 -88.30 -98.09 REMARK 500 5 THR A 13 -46.35 -133.98 REMARK 500 5 ALA A 16 40.70 -176.76 REMARK 500 5 SER A 20 168.92 61.20 REMARK 500 5 PRO A 22 -74.78 -53.10 REMARK 500 5 ALA A 38 -46.80 177.64 REMARK 500 5 GLN A 39 141.59 176.17 REMARK 500 REMARK 500 THIS ENTRY HAS 114 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 50124 RELATED DB: BMRB DBREF 9HDI A 1 183 PDB 9HDI 9HDI 1 183 SEQRES 1 A 183 MET THR THR GLN SER PRO LEU ASN SER PHE TYR ALA THR SEQRES 2 A 183 GLY THR ALA GLN ALA VAL SER GLU PRO ILE ASP VAL GLU SEQRES 3 A 183 SER HIS LEU GLY SER ILE THR PRO ALA ALA GLY ALA GLN SEQRES 4 A 183 GLY SER ASP ASP ILE GLY TYR ALA ILE VAL TRP ILE LYS SEQRES 5 A 183 ASP GLN VAL ASN ASP VAL LYS LEU LYS VAL THR LEU ALA SEQRES 6 A 183 ASN ALA GLU GLN LEU LYS PRO TYR PHE LYS TYR LEU GLN SEQRES 7 A 183 ILE GLN ILE THR SER GLY TYR GLU THR ASN SER THR ALA SEQRES 8 A 183 LEU GLY ASN PHE SER GLU THR LYS ALA VAL ILE SER LEU SEQRES 9 A 183 ASP ASN PRO SER ALA VAL ILE VAL LEU ASP LYS GLU ASP SEQRES 10 A 183 ILE ALA VAL LEU TYR PRO ASP LYS THR GLY TYR THR ASN SEQRES 11 A 183 THR SER ILE TRP VAL PRO GLY GLU PRO ASP LYS ILE ILE SEQRES 12 A 183 VAL TYR ASN GLU THR LYS PRO VAL ALA ILE LEU ASN PHE SEQRES 13 A 183 LYS ALA PHE TYR GLU ALA LYS GLU GLY MET LEU PHE ASP SEQRES 14 A 183 SER LEU PRO VAL ILE PHE ASN PHE GLN VAL LEU GLN VAL SEQRES 15 A 183 GLY HELIX 1 AA1 ASN A 66 LYS A 71 1 6 HELIX 2 AA2 SER A 89 GLY A 93 5 5 SHEET 1 AA1 5 ASP A 24 LEU A 29 0 SHEET 2 AA1 5 GLY A 40 TRP A 50 -1 O TYR A 46 N HIS A 28 SHEET 3 AA1 5 VAL A 151 ALA A 162 -1 O ALA A 152 N VAL A 49 SHEET 4 AA1 5 PHE A 74 SER A 83 -1 N THR A 82 O ASN A 155 SHEET 5 AA1 5 GLU A 97 SER A 103 -1 O ALA A 100 N ILE A 81 SHEET 1 AA2 2 SER A 31 ILE A 32 0 SHEET 2 AA2 2 LEU A 171 PRO A 172 -1 O LEU A 171 N ILE A 32 SHEET 1 AA3 3 SER A 108 ASP A 114 0 SHEET 2 AA3 3 ASP A 57 LEU A 64 -1 N LEU A 60 O ILE A 111 SHEET 3 AA3 3 PHE A 175 VAL A 182 -1 O ASN A 176 N THR A 63 SHEET 1 AA4 3 GLU A 86 THR A 87 0 SHEET 2 AA4 3 SER A 132 TRP A 134 -1 O TRP A 134 N GLU A 86 SHEET 3 AA4 3 ILE A 142 TYR A 145 -1 O ILE A 143 N ILE A 133 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MASTER 207 0 0 2 13 0 0 6 1321 1 0 15 END