HEADER TRANSFERASE 27-NOV-24 9HIX TITLE CRYO-EM STRUCTURE OF CAK (CDK7 D97N MUTANT) IN COMPLEX WITH THZ1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1; COMPND 3 CHAIN: H; COMPND 4 SYNONYM: CDK7/CYCLIN-H ASSEMBLY FACTOR,CYCLIN-G1-INTERACTING PROTEIN, COMPND 5 MENAGE A TROIS,RING FINGER PROTEIN 66,RING FINGER PROTEIN MAT1,P35, COMPND 6 P36; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: CYCLIN-H; COMPND 10 CHAIN: I; COMPND 11 SYNONYM: MO15-ASSOCIATED PROTEIN,P34,P37; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: CYCLIN-DEPENDENT KINASE 7; COMPND 15 CHAIN: J; COMPND 16 SYNONYM: 39 KDA PROTEIN KINASE,P39 MO15,CDK-ACTIVATING KINASE 1,CELL COMPND 17 DIVISION PROTEIN KINASE 7,SERINE/THREONINE-PROTEIN KINASE 1,TFIIH COMPND 18 BASAL TRANSCRIPTION FACTOR COMPLEX KINASE SUBUNIT; COMPND 19 EC: 2.7.11.22,2.7.11.23; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MNAT1, CAP35, MAT1, RNF66; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: CCNH; SOURCE 13 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: CDK7, CAK, CAK1, CDKN7, MO15, STK1; SOURCE 20 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS KINASE, COMPLEX, HETEROTRIMER, TRANSFERASE EXPDTA ELECTRON MICROSCOPY AUTHOR V.I.CUSHING,B.J.GREBER,S.ALI,C.-F.LAI,C.L.BEVAN,R.C.COOMBES, AUTHOR 2 L.BULUWELA REVDAT 1 20-AUG-25 9HIX 0 JRNL AUTH C.-F.LAI,V.I.CUSHING,C.L.BEVAN,R.C.COOMBES,B.J.GREBER, JRNL AUTH 2 L.BULUWELA,S.ALI JRNL TITL MUTATION OF CDK7 AT A CONSERVED RESIDUE IDENTIFIES A COMMON JRNL TITL 2 MECHANISM OF ACQUIRED RESISTANCE TO CDK INHIBITORS IN CANCER JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, RELION, CRYOSPARC, UCSF REMARK 3 CHIMERAX, RELION, RELION, RELION, REMARK 3 RELION, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 8ORM REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.600 REMARK 3 NUMBER OF PARTICLES : 956820 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9HIX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-NOV-24. REMARK 100 THE DEPOSITION ID IS D_1292143478. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CDK-ACTIVATING KINASE (CAK) REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.44 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.90 REMARK 245 SAMPLE DETAILS : CAK (CDK7 D97N MUTANT) MODIFIED REMARK 245 BY THE COVALENT INHIBITOR THZ1 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 9043 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : TFS FALCON 4I (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 700.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1900.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 7000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 215000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 217 REMARK 465 ASN H 218 REMARK 465 ALA H 219 REMARK 465 PRO H 220 REMARK 465 VAL H 221 REMARK 465 THR H 222 REMARK 465 PHE H 223 REMARK 465 SER H 224 REMARK 465 THR H 225 REMARK 465 GLY H 226 REMARK 465 ILE H 227 REMARK 465 LYS H 228 REMARK 465 MET H 229 REMARK 465 GLY H 230 REMARK 465 GLN H 231 REMARK 465 HIS H 232 REMARK 465 ILE H 233 REMARK 465 SER H 234 REMARK 465 LEU H 235 REMARK 465 ALA H 236 REMARK 465 PRO H 237 REMARK 465 ILE H 238 REMARK 465 HIS H 239 REMARK 465 LYS H 240 REMARK 465 LEU H 241 REMARK 465 GLU H 242 REMARK 465 GLU H 243 REMARK 465 SER H 309 REMARK 465 ASN I 37 REMARK 465 GLY I 38 REMARK 465 LYS I 39 REMARK 465 VAL I 40 REMARK 465 LEU I 41 REMARK 465 PRO I 42 REMARK 465 ASN I 43 REMARK 465 GLU I 284 REMARK 465 LEU I 285 REMARK 465 ALA I 286 REMARK 465 LEU I 287 REMARK 465 ASN I 288 REMARK 465 VAL I 289 REMARK 465 ILE I 290 REMARK 465 THR I 291 REMARK 465 LYS I 292 REMARK 465 LYS I 293 REMARK 465 ARG I 294 REMARK 465 LYS I 295 REMARK 465 GLY I 296 REMARK 465 TYR I 297 REMARK 465 GLU I 298 REMARK 465 ASP I 299 REMARK 465 ASP I 300 REMARK 465 ASP I 301 REMARK 465 TYR I 302 REMARK 465 VAL I 303 REMARK 465 SER I 304 REMARK 465 LYS I 305 REMARK 465 LYS I 306 REMARK 465 SER I 307 REMARK 465 LYS I 308 REMARK 465 HIS I 309 REMARK 465 GLU I 310 REMARK 465 GLU I 311 REMARK 465 GLU I 312 REMARK 465 GLU I 313 REMARK 465 TRP I 314 REMARK 465 THR I 315 REMARK 465 ASP I 316 REMARK 465 ASP I 317 REMARK 465 ASP I 318 REMARK 465 LEU I 319 REMARK 465 VAL I 320 REMARK 465 GLU I 321 REMARK 465 SER I 322 REMARK 465 LEU I 323 REMARK 465 SER J -2 REMARK 465 ASN J -1 REMARK 465 ALA J 0 REMARK 465 MET J 1 REMARK 465 ALA J 2 REMARK 465 LEU J 3 REMARK 465 ASP J 4 REMARK 465 VAL J 5 REMARK 465 LYS J 6 REMARK 465 SER J 7 REMARK 465 ARG J 8 REMARK 465 ALA J 9 REMARK 465 ASP J 31 REMARK 465 LYS J 32 REMARK 465 ASN J 33 REMARK 465 THR J 34 REMARK 465 ASN J 35 REMARK 465 GLN J 36 REMARK 465 LEU J 45 REMARK 465 GLY J 46 REMARK 465 HIS J 47 REMARK 465 ARG J 48 REMARK 465 SER J 49 REMARK 465 GLU J 50 REMARK 465 ALA J 51 REMARK 465 ASN J 166 REMARK 465 ARG J 167 REMARK 465 ALA J 168 REMARK 465 TYR J 169 REMARK 465 THR J 170 REMARK 465 HIS J 171 REMARK 465 PRO J 313 REMARK 465 VAL J 314 REMARK 465 GLU J 315 REMARK 465 THR J 316 REMARK 465 LEU J 317 REMARK 465 LYS J 318 REMARK 465 GLU J 319 REMARK 465 GLN J 320 REMARK 465 SER J 321 REMARK 465 ASN J 322 REMARK 465 PRO J 323 REMARK 465 ALA J 324 REMARK 465 LEU J 325 REMARK 465 ALA J 326 REMARK 465 ILE J 327 REMARK 465 LYS J 328 REMARK 465 ARG J 329 REMARK 465 LYS J 330 REMARK 465 ARG J 331 REMARK 465 THR J 332 REMARK 465 GLU J 333 REMARK 465 ALA J 334 REMARK 465 LEU J 335 REMARK 465 GLU J 336 REMARK 465 GLN J 337 REMARK 465 GLY J 338 REMARK 465 GLY J 339 REMARK 465 LEU J 340 REMARK 465 PRO J 341 REMARK 465 LYS J 342 REMARK 465 LYS J 343 REMARK 465 LEU J 344 REMARK 465 ILE J 345 REMARK 465 PHE J 346 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP J 137 ND2 ASN J 142 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS J 84 -108.51 55.10 REMARK 500 ASP J 137 43.33 -141.34 REMARK 500 VAL J 174 143.00 68.67 REMARK 500 TRP J 237 81.78 -161.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-52205 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF CAK (CDK7 D97N MUTANT) IN COMPLEX WITH THZ1 DBREF 9HIX H 220 309 UNP P51948 MAT1_HUMAN 220 309 DBREF 9HIX I 1 323 UNP P51946 CCNH_HUMAN 1 323 DBREF 9HIX J 1 346 UNP P50613 CDK7_HUMAN 1 346 SEQADV 9HIX SER H 217 UNP P51948 EXPRESSION TAG SEQADV 9HIX ASN H 218 UNP P51948 EXPRESSION TAG SEQADV 9HIX ALA H 219 UNP P51948 EXPRESSION TAG SEQADV 9HIX ACE I 0 UNP P51946 ACETYLATION SEQADV 9HIX SER J -2 UNP P50613 EXPRESSION TAG SEQADV 9HIX ASN J -1 UNP P50613 EXPRESSION TAG SEQADV 9HIX ALA J 0 UNP P50613 EXPRESSION TAG SEQADV 9HIX ASN J 97 UNP P50613 ASP 97 ENGINEERED MUTATION SEQRES 1 H 93 SER ASN ALA PRO VAL THR PHE SER THR GLY ILE LYS MET SEQRES 2 H 93 GLY GLN HIS ILE SER LEU ALA PRO ILE HIS LYS LEU GLU SEQRES 3 H 93 GLU ALA LEU TYR GLU TYR GLN PRO LEU GLN ILE GLU THR SEQRES 4 H 93 TYR GLY PRO HIS VAL PRO GLU LEU GLU MET LEU GLY ARG SEQRES 5 H 93 LEU GLY TYR LEU ASN HIS VAL ARG ALA ALA SER PRO GLN SEQRES 6 H 93 ASP LEU ALA GLY GLY TYR THR SER SER LEU ALA CYS HIS SEQRES 7 H 93 ARG ALA LEU GLN ASP ALA PHE SER GLY LEU PHE TRP GLN SEQRES 8 H 93 PRO SER SEQRES 1 I 324 ACE MET TYR HIS ASN SER SER GLN LYS ARG HIS TRP THR SEQRES 2 I 324 PHE SER SER GLU GLU GLN LEU ALA ARG LEU ARG ALA ASP SEQRES 3 I 324 ALA ASN ARG LYS PHE ARG CYS LYS ALA VAL ALA ASN GLY SEQRES 4 I 324 LYS VAL LEU PRO ASN ASP PRO VAL PHE LEU GLU PRO HIS SEQRES 5 I 324 GLU GLU MET THR LEU CYS LYS TYR TYR GLU LYS ARG LEU SEQRES 6 I 324 LEU GLU PHE CYS SER VAL PHE LYS PRO ALA MET PRO ARG SEQRES 7 I 324 SER VAL VAL GLY THR ALA CYS MET TYR PHE LYS ARG PHE SEQRES 8 I 324 TYR LEU ASN ASN SER VAL MET GLU TYR HIS PRO ARG ILE SEQRES 9 I 324 ILE MET LEU THR CYS ALA PHE LEU ALA CYS LYS VAL ASP SEQRES 10 I 324 GLU PHE ASN VAL SER SER PRO GLN PHE VAL GLY ASN LEU SEQRES 11 I 324 ARG GLU SER PRO LEU GLY GLN GLU LYS ALA LEU GLU GLN SEQRES 12 I 324 ILE LEU GLU TYR GLU LEU LEU LEU ILE GLN GLN LEU ASN SEQRES 13 I 324 PHE HIS LEU ILE VAL HIS ASN PRO TYR ARG PRO PHE GLU SEQRES 14 I 324 GLY PHE LEU ILE ASP LEU LYS THR ARG TYR PRO ILE LEU SEQRES 15 I 324 GLU ASN PRO GLU ILE LEU ARG LYS THR ALA ASP ASP PHE SEQRES 16 I 324 LEU ASN ARG ILE ALA LEU THR ASP ALA TYR LEU LEU TYR SEQRES 17 I 324 THR PRO SER GLN ILE ALA LEU THR ALA ILE LEU SER SER SEQRES 18 I 324 ALA SER ARG ALA GLY ILE THR MET GLU SER TYR LEU SER SEQRES 19 I 324 GLU SER LEU MET LEU LYS GLU ASN ARG THR CYS LEU SER SEQRES 20 I 324 GLN LEU LEU ASP ILE MET LYS SER MET ARG ASN LEU VAL SEQRES 21 I 324 LYS LYS TYR GLU PRO PRO ARG SER GLU GLU VAL ALA VAL SEQRES 22 I 324 LEU LYS GLN LYS LEU GLU ARG CYS HIS SER ALA GLU LEU SEQRES 23 I 324 ALA LEU ASN VAL ILE THR LYS LYS ARG LYS GLY TYR GLU SEQRES 24 I 324 ASP ASP ASP TYR VAL SER LYS LYS SER LYS HIS GLU GLU SEQRES 25 I 324 GLU GLU TRP THR ASP ASP ASP LEU VAL GLU SER LEU SEQRES 1 J 349 SER ASN ALA MET ALA LEU ASP VAL LYS SER ARG ALA LYS SEQRES 2 J 349 ARG TYR GLU LYS LEU ASP PHE LEU GLY GLU GLY GLN PHE SEQRES 3 J 349 ALA THR VAL TYR LYS ALA ARG ASP LYS ASN THR ASN GLN SEQRES 4 J 349 ILE VAL ALA ILE LYS LYS ILE LYS LEU GLY HIS ARG SER SEQRES 5 J 349 GLU ALA LYS ASP GLY ILE ASN ARG THR ALA LEU ARG GLU SEQRES 6 J 349 ILE LYS LEU LEU GLN GLU LEU SER HIS PRO ASN ILE ILE SEQRES 7 J 349 GLY LEU LEU ASP ALA PHE GLY HIS LYS SER ASN ILE SER SEQRES 8 J 349 LEU VAL PHE ASP PHE MET GLU THR ASN LEU GLU VAL ILE SEQRES 9 J 349 ILE LYS ASP ASN SER LEU VAL LEU THR PRO SER HIS ILE SEQRES 10 J 349 LYS ALA TYR MET LEU MET THR LEU GLN GLY LEU GLU TYR SEQRES 11 J 349 LEU HIS GLN HIS TRP ILE LEU HIS ARG ASP LEU LYS PRO SEQRES 12 J 349 ASN ASN LEU LEU LEU ASP GLU ASN GLY VAL LEU LYS LEU SEQRES 13 J 349 ALA ASP PHE GLY LEU ALA LYS SER PHE GLY SER PRO ASN SEQRES 14 J 349 ARG ALA TYR THR HIS GLN VAL VAL THR ARG TRP TYR ARG SEQRES 15 J 349 ALA PRO GLU LEU LEU PHE GLY ALA ARG MET TYR GLY VAL SEQRES 16 J 349 GLY VAL ASP MET TRP ALA VAL GLY CYS ILE LEU ALA GLU SEQRES 17 J 349 LEU LEU LEU ARG VAL PRO PHE LEU PRO GLY ASP SER ASP SEQRES 18 J 349 LEU ASP GLN LEU THR ARG ILE PHE GLU THR LEU GLY THR SEQRES 19 J 349 PRO THR GLU GLU GLN TRP PRO ASP MET CYS SER LEU PRO SEQRES 20 J 349 ASP TYR VAL THR PHE LYS SER PHE PRO GLY ILE PRO LEU SEQRES 21 J 349 HIS HIS ILE PHE SER ALA ALA GLY ASP ASP LEU LEU ASP SEQRES 22 J 349 LEU ILE GLN GLY LEU PHE LEU PHE ASN PRO CYS ALA ARG SEQRES 23 J 349 ILE THR ALA THR GLN ALA LEU LYS MET LYS TYR PHE SER SEQRES 24 J 349 ASN ARG PRO GLY PRO THR PRO GLY CYS GLN LEU PRO ARG SEQRES 25 J 349 PRO ASN CYS PRO VAL GLU THR LEU LYS GLU GLN SER ASN SEQRES 26 J 349 PRO ALA LEU ALA ILE LYS ARG LYS ARG THR GLU ALA LEU SEQRES 27 J 349 GLU GLN GLY GLY LEU PRO LYS LYS LEU ILE PHE HET ACE I 0 3 HET V0G J 401 82 HETNAM ACE ACETYL GROUP HETNAM V0G N-(3-{[5-CHLORO-4-(1H-INDOL-3-YL)PYRIMIDIN-2- HETNAM 2 V0G YL]AMINO}PHENYL)-4-{[4-(DIMETHYLAMINO) HETNAM 3 V0G BUTANOYL]AMINO}BENZAMIDE FORMUL 2 ACE C2 H4 O FORMUL 4 V0G C31 H30 CL N7 O2 FORMUL 5 HOH *59(H2 O) HELIX 1 AA1 GLU H 262 LEU H 266 5 5 HELIX 2 AA2 GLY H 270 VAL H 275 5 6 HELIX 3 AA3 SER H 279 GLY H 286 1 8 HELIX 4 AA4 THR H 288 SER H 302 1 15 HELIX 5 AA5 MET I 1 ASN I 4 5 4 HELIX 6 AA6 SER I 5 TRP I 11 1 7 HELIX 7 AA7 SER I 15 ALA I 36 1 22 HELIX 8 AA8 GLU I 49 VAL I 70 1 22 HELIX 9 AA9 PRO I 76 TYR I 91 1 16 HELIX 10 AB1 HIS I 100 ASP I 116 1 17 HELIX 11 AB2 SER I 121 GLY I 127 1 7 HELIX 12 AB3 SER I 132 LEU I 154 1 23 HELIX 13 AB4 PRO I 163 TYR I 178 1 16 HELIX 14 AB5 ASN I 183 ILE I 186 5 4 HELIX 15 AB6 LEU I 187 THR I 201 1 15 HELIX 16 AB7 ASP I 202 LEU I 206 5 5 HELIX 17 AB8 THR I 208 ALA I 224 1 17 HELIX 18 AB9 MET I 228 GLU I 234 1 7 HELIX 19 AC1 ASN I 241 LYS I 261 1 21 HELIX 20 AC2 ARG I 266 ALA I 283 1 18 HELIX 21 AC3 ASN J 56 GLN J 67 1 12 HELIX 22 AC4 LEU J 98 ASP J 104 1 7 HELIX 23 AC5 THR J 110 HIS J 131 1 22 HELIX 24 AC6 ASP J 155 ALA J 159 5 5 HELIX 25 AC7 THR J 175 ARG J 179 5 5 HELIX 26 AC8 ALA J 180 PHE J 185 1 6 HELIX 27 AC9 VAL J 192 ARG J 209 1 18 HELIX 28 AD1 SER J 217 GLY J 230 1 14 HELIX 29 AD2 ASP J 239 LEU J 243 5 5 HELIX 30 AD3 PRO J 256 PHE J 261 1 6 HELIX 31 AD4 GLY J 265 PHE J 276 1 12 HELIX 32 AD5 THR J 285 LYS J 291 1 7 HELIX 33 AD6 MET J 292 ASN J 297 1 6 HELIX 34 AD7 PRO J 303 LEU J 307 5 5 SHEET 1 AA1 5 GLY J 19 GLU J 20 0 SHEET 2 AA1 5 ALA J 24 ALA J 29 -1 O VAL J 26 N GLY J 19 SHEET 3 AA1 5 VAL J 38 ILE J 43 -1 O LYS J 42 N THR J 25 SHEET 4 AA1 5 ASN J 86 ASP J 92 -1 O PHE J 91 N ALA J 39 SHEET 5 AA1 5 LEU J 77 HIS J 83 -1 N ASP J 79 O VAL J 90 SHEET 1 AA2 3 THR J 96 ASN J 97 0 SHEET 2 AA2 3 LEU J 143 LEU J 145 -1 O LEU J 145 N THR J 96 SHEET 3 AA2 3 LEU J 151 LEU J 153 -1 O LYS J 152 N LEU J 144 SHEET 1 AA3 2 ILE J 133 LEU J 134 0 SHEET 2 AA3 2 LYS J 160 SER J 161 -1 O LYS J 160 N LEU J 134 LINK C ACE I 0 N MET I 1 1555 1555 1.33 LINK SG ACYS J 312 C19AV0G J 401 1555 1555 1.73 LINK SG BCYS J 312 C19BV0G J 401 1555 1555 1.73 CISPEP 1 LYS I 72 PRO I 73 0 3.89 CISPEP 2 ARG J 298 PRO J 299 0 -1.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 513 PRO H 308 HETATM 514 C ACE I 0 97.792 104.145 100.372 1.00 10.74 C HETATM 515 O ACE I 0 97.224 103.678 101.357 1.00 11.37 O HETATM 516 CH3 ACE I 0 99.283 104.126 100.224 1.00 9.95 C TER 2774 ALA I 283 TER 5042 CYS J 312 HETATM 5043 C13AV0G J 401 129.880 109.631 90.399 0.81 50.46 C HETATM 5044 C13BV0G J 401 129.921 110.436 89.542 0.19 53.30 C HETATM 5045 C15AV0G J 401 130.956 108.919 88.362 0.81 61.72 C HETATM 5046 C15BV0G J 401 130.713 109.648 87.408 0.19 63.25 C HETATM 5047 C17AV0G J 401 131.199 109.209 85.878 0.81 69.73 C HETATM 5048 C17BV0G J 401 130.368 109.701 84.892 0.19 67.76 C HETATM 5049 C20AV0G J 401 132.956 107.113 84.925 0.81 70.81 C HETATM 5050 C20BV0G J 401 132.905 109.550 81.974 0.19 70.98 C HETATM 5051 C22AV0G J 401 134.852 105.810 84.283 0.81 70.21 C HETATM 5052 C22BV0G J 401 132.480 107.227 81.640 0.19 71.05 C HETATM 5053 C26AV0G J 401 129.555 107.389 89.585 0.81 53.81 C HETATM 5054 C26BV0G J 401 130.077 108.072 89.119 0.19 55.50 C HETATM 5055 C28AV0G J 401 126.644 106.547 93.878 0.81 29.20 C HETATM 5056 C28BV0G J 401 129.307 107.429 94.233 0.19 33.42 C HETATM 5057 C02AV0G J 401 120.014 102.715 94.079 0.81 15.00 C HETATM 5058 C02BV0G J 401 123.358 105.810 98.599 0.19 19.00 C HETATM 5059 C03AV0G J 401 119.985 103.020 92.724 0.81 15.10 C HETATM 5060 C03BV0G J 401 122.671 105.970 97.403 0.19 18.25 C HETATM 5061 C05AV0G J 401 121.960 104.192 92.956 0.81 17.48 C HETATM 5062 C05BV0G J 401 124.664 105.984 96.247 0.19 22.00 C HETATM 5063 C07AV0G J 401 124.235 105.516 92.896 0.81 22.59 C HETATM 5064 C07BV0G J 401 126.708 106.545 94.717 0.19 27.94 C HETATM 5065 C08AV0G J 401 125.218 105.984 92.031 0.81 25.11 C HETATM 5066 C08BV0G J 401 127.139 106.774 93.409 0.19 30.77 C HETATM 5067 C09AV0G J 401 126.415 106.498 92.510 0.81 29.84 C HETATM 5068 C09BV0G J 401 128.437 107.218 93.172 0.19 34.88 C HETATM 5069 C11AV0G J 401 128.383 108.033 91.723 0.81 41.49 C HETATM 5070 C11BV0G J 401 129.233 108.838 91.394 0.19 44.30 C HETATM 5071 C12AV0G J 401 129.310 108.368 90.534 0.81 49.39 C HETATM 5072 C12BV0G J 401 129.758 109.123 89.968 0.19 51.21 C HETATM 5073 C14AV0G J 401 130.707 109.905 89.310 0.81 56.42 C HETATM 5074 C14BV0G J 401 130.398 110.698 88.259 0.19 59.06 C HETATM 5075 C18AV0G J 401 132.036 109.475 84.614 0.81 71.20 C HETATM 5076 C18BV0G J 401 130.908 110.002 83.484 0.19 69.25 C HETATM 5077 C19AV0G J 401 133.257 108.557 84.501 0.81 71.08 C HETATM 5078 C19BV0G J 401 132.431 109.868 83.399 0.19 70.97 C HETATM 5079 C23AV0G J 401 133.352 106.593 82.604 0.81 74.22 C HETATM 5080 C23BV0G J 401 134.287 107.892 83.047 0.19 71.90 C HETATM 5081 C25AV0G J 401 130.380 107.662 88.500 0.81 58.43 C HETATM 5082 C25BV0G J 401 130.554 108.335 87.836 0.19 60.41 C HETATM 5083 C29AV0G J 401 125.664 106.084 94.754 0.81 25.08 C HETATM 5084 C29BV0G J 401 128.884 107.200 95.536 0.19 30.22 C HETATM 5085 C30AV0G J 401 124.465 105.574 94.264 0.81 22.26 C HETATM 5086 C30BV0G J 401 127.588 106.760 95.769 0.19 28.23 C HETATM 5087 C32AV0G J 401 121.071 103.194 94.849 0.81 14.94 C HETATM 5088 C32BV0G J 401 124.750 105.742 98.563 0.19 20.90 C HETATM 5089 C33AV0G J 401 121.203 102.923 96.353 0.81 13.70 C HETATM 5090 C33BV0G J 401 125.623 105.558 99.816 0.19 21.31 C HETATM 5091 C34AV0G J 401 120.174 102.835 97.277 0.81 14.18 C HETATM 5092 C34BV0G J 401 125.295 105.879 101.126 0.19 21.55 C HETATM 5093 C36AV0G J 401 122.073 102.549 98.358 0.81 18.03 C HETATM 5094 C36BV0G J 401 127.337 105.052 101.139 0.19 23.26 C HETATM 5095 C37AV0G J 401 123.080 102.335 99.336 0.81 17.76 C HETATM 5096 C37BV0G J 401 128.627 104.581 101.500 0.19 24.73 C HETATM 5097 C38AV0G J 401 124.417 102.326 98.964 0.81 19.31 C HETATM 5098 C38BV0G J 401 129.488 104.099 100.523 0.19 25.93 C HETATM 5099 C39AV0G J 401 124.771 102.528 97.630 0.81 17.45 C HETATM 5100 C39BV0G J 401 129.083 104.080 99.188 0.19 24.45 C HETATM 5101 C40AV0G J 401 123.785 102.739 96.673 0.81 17.32 C HETATM 5102 C40BV0G J 401 127.818 104.540 98.836 0.19 23.64 C HETATM 5103 C41AV0G J 401 122.419 102.749 97.051 0.81 16.35 C HETATM 5104 C41BV0G J 401 126.937 105.033 99.830 0.19 22.52 C HETATM 5105 N04AV0G J 401 120.965 103.748 92.214 0.81 14.00 N HETATM 5106 N04BV0G J 401 123.351 106.049 96.270 0.19 19.48 N HETATM 5107 N06AV0G J 401 122.998 104.996 92.300 0.81 23.20 N HETATM 5108 N06BV0G J 401 125.335 106.075 94.943 0.19 24.71 N HETATM 5109 N10AV0G J 401 127.398 106.964 91.520 0.81 34.25 N HETATM 5110 N10BV0G J 401 128.920 107.469 91.809 0.19 40.85 N HETATM 5111 N16AV0G J 401 131.816 109.184 87.204 0.81 67.08 N HETATM 5112 N16BV0G J 401 131.216 109.929 86.059 0.19 67.78 N HETATM 5113 N21AV0G J 401 133.469 106.128 83.978 0.81 74.09 N HETATM 5114 N21BV0G J 401 133.509 108.227 81.865 0.19 71.80 N HETATM 5115 N31AV0G J 401 122.003 103.916 94.246 0.81 16.03 N HETATM 5116 N31BV0G J 401 125.337 105.825 97.376 0.19 22.26 N HETATM 5117 N35AV0G J 401 120.712 102.602 98.473 0.81 16.75 N HETATM 5118 N35BV0G J 401 126.328 105.565 101.905 0.19 23.21 N HETATM 5119 O24AV0G J 401 130.036 109.021 85.770 0.81 68.69 O HETATM 5120 O24BV0G J 401 129.267 109.290 85.030 0.19 64.78 O HETATM 5121 O27AV0G J 401 128.474 108.627 92.742 0.81 40.44 O HETATM 5122 O27BV0G J 401 129.089 109.733 92.154 0.19 41.26 O HETATM 5123 CL01AV0G J 401 118.696 101.732 94.776 0.81 22.64 CL HETATM 5124 CL01BV0G J 401 122.412 105.707 100.112 0.19 16.89 CL HETATM 5125 O HOH H 401 87.229 110.592 98.300 1.00 15.69 O HETATM 5126 O HOH H 402 106.658 115.200 114.270 1.00 17.63 O HETATM 5127 O HOH H 403 92.280 103.680 101.376 1.00 13.94 O HETATM 5128 O HOH H 404 89.186 109.439 99.955 1.00 13.99 O HETATM 5129 O HOH H 405 88.003 112.896 94.464 1.00 21.25 O HETATM 5130 O HOH H 406 79.487 102.282 93.211 1.00 22.51 O HETATM 5131 O HOH H 407 103.639 120.960 93.312 1.00 26.82 O HETATM 5132 O HOH H 408 94.464 116.539 119.372 1.00 21.69 O HETATM 5133 O HOH I 401 91.008 92.160 95.892 1.00 8.11 O HETATM 5134 O HOH I 402 110.574 79.653 98.167 1.00 19.04 O HETATM 5135 O HOH I 403 95.689 89.856 89.664 1.00 6.46 O HETATM 5136 O HOH I 404 80.973 84.095 96.574 1.00 20.85 O HETATM 5137 O HOH I 405 89.629 95.616 95.616 1.00 7.69 O HETATM 5138 O HOH I 406 92.160 76.183 93.312 1.00 16.77 O HETATM 5139 O HOH I 407 111.744 82.024 103.671 1.00 24.99 O HETATM 5140 O HOH I 408 83.040 93.245 90.816 1.00 13.59 O HETATM 5141 O HOH I 409 86.171 80.640 102.735 1.00 24.88 O HETATM 5142 O HOH I 410 97.920 84.096 92.623 1.00 16.94 O HETATM 5143 O HOH I 411 106.613 100.224 106.893 1.00 16.16 O HETATM 5144 O HOH I 412 97.920 101.253 98.623 1.00 7.10 O HETATM 5145 O HOH I 413 102.639 71.424 99.470 1.00 23.08 O HETATM 5146 O HOH I 414 87.452 83.118 97.921 1.00 17.29 O HETATM 5147 O HOH I 415 97.234 97.905 97.920 1.00 5.24 O HETATM 5148 O HOH I 416 91.008 100.225 103.518 1.00 10.96 O HETATM 5149 O HOH I 417 87.863 94.464 99.072 1.00 3.65 O HETATM 5150 O HOH I 418 93.312 76.031 112.896 1.00 31.71 O HETATM 5151 O HOH I 419 108.287 94.464 109.440 1.00 27.21 O HETATM 5152 O HOH I 420 88.704 76.032 92.241 1.00 27.52 O HETATM 5153 O HOH I 421 93.312 98.344 105.668 1.00 9.55 O HETATM 5154 O HOH I 422 108.288 94.464 107.137 1.00 22.04 O HETATM 5155 O HOH I 423 88.476 94.464 101.376 1.00 4.90 O HETATM 5156 O HOH I 424 85.089 79.488 91.376 1.00 20.56 O HETATM 5157 O HOH I 425 85.742 77.184 91.008 1.00 22.38 O HETATM 5158 O HOH J 501 118.356 129.083 96.577 1.00 20.58 O HETATM 5159 O HOH J 502 114.261 133.632 96.050 1.00 23.32 O HETATM 5160 O HOH J 503 109.416 131.139 108.310 1.00 25.32 O HETATM 5161 O HOH J 504 110.460 107.136 89.856 1.00 14.41 O HETATM 5162 O HOH J 505 102.528 122.826 110.591 1.00 18.29 O HETATM 5163 O HOH J 506 113.519 104.832 104.832 1.00 8.92 O HETATM 5164 O HOH J 507 104.630 119.893 110.947 1.00 13.60 O HETATM 5165 O HOH J 508 123.296 118.656 107.198 1.00 17.28 O HETATM 5166 O HOH J 509 99.072 113.211 104.832 1.00 14.31 O HETATM 5167 O HOH J 510 119.808 117.237 113.309 1.00 9.41 O HETATM 5168 O HOH J 511 106.940 89.779 111.744 1.00 18.43 O HETATM 5169 O HOH J 512 108.542 126.720 117.628 1.00 25.06 O HETATM 5170 O HOH J 513 98.804 103.680 96.768 1.00 12.17 O HETATM 5171 O HOH J 514 106.265 119.808 109.411 1.00 11.05 O HETATM 5172 O HOH J 515 107.680 105.984 92.124 1.00 10.15 O HETATM 5173 O HOH J 516 126.579 126.576 98.731 1.00 20.37 O HETATM 5174 O HOH J 517 103.703 116.633 94.378 1.00 8.13 O HETATM 5175 O HOH J 518 132.480 120.960 99.072 1.00 27.53 O HETATM 5176 O HOH J 519 123.264 118.337 109.490 1.00 23.71 O HETATM 5177 O HOH J 520 103.680 117.363 104.583 1.00 4.98 O HETATM 5178 O HOH J 521 110.874 127.725 117.316 1.00 21.14 O HETATM 5179 O HOH J 522 113.719 111.746 107.860 1.00 9.71 O HETATM 5180 O HOH J 523 109.200 100.224 110.592 1.00 24.52 O HETATM 5181 O HOH J 524 100.224 115.639 102.920 1.00 5.56 O HETATM 5182 O HOH J 525 104.294 100.237 107.168 1.00 16.11 O HETATM 5183 O HOH J 526 101.224 116.813 106.515 1.00 5.03 O CONECT 514 515 516 517 CONECT 515 514 CONECT 516 514 CONECT 517 514 CONECT 5040 5077 CONECT 5041 5078 CONECT 5043 5071 5073 CONECT 5044 5072 5074 CONECT 5045 5073 5081 5111 CONECT 5046 5074 5082 5112 CONECT 5047 5075 5111 5119 CONECT 5048 5076 5112 5120 CONECT 5049 5077 5113 CONECT 5050 5078 5114 CONECT 5051 5113 CONECT 5052 5114 CONECT 5053 5071 5081 CONECT 5054 5072 5082 CONECT 5055 5067 5083 CONECT 5056 5068 5084 CONECT 5057 5059 5087 5123 CONECT 5058 5060 5088 5124 CONECT 5059 5057 5105 CONECT 5060 5058 5106 CONECT 5061 5105 5107 5115 CONECT 5062 5106 5108 5116 CONECT 5063 5065 5085 5107 CONECT 5064 5066 5086 5108 CONECT 5065 5063 5067 CONECT 5066 5064 5068 CONECT 5067 5055 5065 5109 CONECT 5068 5056 5066 5110 CONECT 5069 5071 5109 5121 CONECT 5070 5072 5110 5122 CONECT 5071 5043 5053 5069 CONECT 5072 5044 5054 5070 CONECT 5073 5043 5045 CONECT 5074 5044 5046 CONECT 5075 5047 5077 CONECT 5076 5048 5078 CONECT 5077 5040 5049 5075 CONECT 5078 5041 5050 5076 CONECT 5079 5113 CONECT 5080 5114 CONECT 5081 5045 5053 CONECT 5082 5046 5054 CONECT 5083 5055 5085 CONECT 5084 5056 5086 CONECT 5085 5063 5083 CONECT 5086 5064 5084 CONECT 5087 5057 5089 5115 CONECT 5088 5058 5090 5116 CONECT 5089 5087 5091 5103 CONECT 5090 5088 5092 5104 CONECT 5091 5089 5117 CONECT 5092 5090 5118 CONECT 5093 5095 5103 5117 CONECT 5094 5096 5104 5118 CONECT 5095 5093 5097 CONECT 5096 5094 5098 CONECT 5097 5095 5099 CONECT 5098 5096 5100 CONECT 5099 5097 5101 CONECT 5100 5098 5102 CONECT 5101 5099 5103 CONECT 5102 5100 5104 CONECT 5103 5089 5093 5101 CONECT 5104 5090 5094 5102 CONECT 5105 5059 5061 CONECT 5106 5060 5062 CONECT 5107 5061 5063 CONECT 5108 5062 5064 CONECT 5109 5067 5069 CONECT 5110 5068 5070 CONECT 5111 5045 5047 CONECT 5112 5046 5048 CONECT 5113 5049 5051 5079 CONECT 5114 5050 5052 5080 CONECT 5115 5061 5087 CONECT 5116 5062 5088 CONECT 5117 5091 5093 CONECT 5118 5092 5094 CONECT 5119 5047 CONECT 5120 5048 CONECT 5121 5069 CONECT 5122 5070 CONECT 5123 5057 CONECT 5124 5058 MASTER 278 0 2 34 10 0 0 6 5133 3 88 60 END