HEADER RNA BINDING PROTEIN 10-DEC-24 9HN9 TITLE MOUSE QTRT1/2 IN COMPLEX WITH MOUSE PRE-TRNA-TYR-1-4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GUANINE INSERTION ENZYME,TRNA-GUANINE TRANSGLYCOSYLASE; COMPND 5 EC: 2.4.2.29; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: QUEUINE TRNA-RIBOSYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: MOUSE PRE-TRNA-TYR-1-4; COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: QTRT1, TGT, TGUT; SOURCE 6 EXPRESSION_SYSTEM: VIBRIO NATRIEGENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 691; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 GENE: QTRT2, QTRTD1; SOURCE 13 EXPRESSION_SYSTEM: VIBRIO NATRIEGENS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 691; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 18 ORGANISM_TAXID: 10090 KEYWDS QUEUOSINE, TRNA, QTRT1/2, TRNA MODIFICATION, RNA BINDING PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR I.KACZMARCZYK,L.KOZIEJ,S.GLATT REVDAT 1 13-AUG-25 9HN9 0 JRNL AUTH W.GUO,I.KACZMARCZYK,K.KOPIETZ,F.FLEGLER,S.RUSSO,E.CIGIRGAN, JRNL AUTH 2 A.CHRAMIEC-GLABIK,L.KOZIEJ,C.CIRZI,J.PESCHEK,K.REUTER, JRNL AUTH 3 M.HELM,S.GLATT,F.TUORTO JRNL TITL QUEUOSINE IS INCORPORATED INTO PRECURSOR TRNA BEFORE JRNL TITL 2 SPLICING. JRNL REF NAT COMMUN V. 16 7044 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 40745156 JRNL DOI 10.1038/S41467-025-62220-Z REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, ISOLDE, UCSF REMARK 3 CHIMERAX, CRYOSPARC, RELION, RELION, REMARK 3 RELION, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 7OV9 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : ISOLDE REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 396050 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9HN9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1292143837. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : MOUSE QTRT1/2 IN COMPLEX WITH REMARK 245 MOUSE PRE-TRNA-TYR-1-4 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.20 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 9687 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : 105000 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 9 REMARK 465 PRO A 10 REMARK 465 GLU A 11 REMARK 465 SER A 164 REMARK 465 THR A 165 REMARK 465 CYS A 280 REMARK 465 VAL A 281 REMARK 465 TYR A 282 REMARK 465 PRO A 283 REMARK 465 THR A 284 REMARK 465 ARG A 285 REMARK 465 THR A 286 REMARK 465 ALA A 287 REMARK 465 THR A 403 REMARK 465 GLY B 0 REMARK 465 PRO B 1 REMARK 465 LYS B 2 REMARK 465 LEU B 3 REMARK 465 SER B 4 REMARK 465 LEU B 5 REMARK 465 ILE B 6 REMARK 465 LYS B 7 REMARK 465 VAL B 8 REMARK 465 VAL B 9 REMARK 465 ASN B 10 REMARK 465 GLY B 11 REMARK 465 CYS B 12 REMARK 465 ARG B 13 REMARK 465 LEU B 14 REMARK 465 GLY B 15 REMARK 465 LYS B 16 REMARK 465 ILE B 17 REMARK 465 GLN B 18 REMARK 465 ASN B 19 REMARK 465 LEU B 20 REMARK 465 GLY B 21 REMARK 465 LYS B 22 REMARK 465 ALA B 23 REMARK 465 GLY B 24 REMARK 465 ASP B 25 REMARK 465 CYS B 26 REMARK 465 THR B 27 REMARK 465 VAL B 28 REMARK 465 ASP B 29 REMARK 465 ILE B 30 REMARK 465 ALA B 152 REMARK 465 GLU B 153 REMARK 465 THR B 154 REMARK 465 THR B 155 REMARK 465 ASP B 225 REMARK 465 PRO B 226 REMARK 465 ALA B 227 REMARK 465 CYS B 292 REMARK 465 GLN B 293 REMARK 465 LEU B 294 REMARK 465 ASN B 295 REMARK 465 PRO B 296 REMARK 465 GLU B 297 REMARK 465 GLU B 298 REMARK 465 THR B 299 REMARK 465 LEU B 300 REMARK 465 LEU B 301 REMARK 465 GLN B 302 REMARK 465 GLN B 303 REMARK 465 ASN B 304 REMARK 465 GLY B 305 REMARK 465 ILE B 306 REMARK 465 GLN B 307 REMARK 465 GLU B 308 REMARK 465 LYS B 309 REMARK 465 ILE B 310 REMARK 465 LYS B 311 REMARK 465 GLY B 312 REMARK 465 LEU B 313 REMARK 465 ASP B 314 REMARK 465 GLN B 315 REMARK 465 ALA B 316 REMARK 465 LYS B 317 REMARK 465 LYS B 318 REMARK 465 ILE B 319 REMARK 465 GLU B 320 REMARK 465 ALA B 321 REMARK 465 THR B 322 REMARK 465 GLY B 323 REMARK 465 CYS B 324 REMARK 465 ASN B 325 REMARK 465 GLN B 326 REMARK 465 GLU B 327 REMARK 465 MET B 328 REMARK 465 THR B 329 REMARK 465 SER B 330 REMARK 465 ASP B 401 REMARK 465 THR B 402 REMARK 465 LEU B 403 REMARK 465 ALA B 404 REMARK 465 GLN B 405 REMARK 465 LEU B 406 REMARK 465 LYS B 407 REMARK 465 GLU B 408 REMARK 465 LEU B 409 REMARK 465 ILE B 410 REMARK 465 CYS B 411 REMARK 465 ARG B 412 REMARK 465 GLN B 413 REMARK 465 MET B 414 REMARK 465 PHE B 415 REMARK 465 G C -1 REMARK 465 G C 0 REMARK 465 G C 37 REMARK 465 G C 38 REMARK 465 U C 39 REMARK 465 C C 40 REMARK 465 A C 41 REMARK 465 U C 42 REMARK 465 U C 43 REMARK 465 G C 44 REMARK 465 U C 45 REMARK 465 U C 46 REMARK 465 C C 47 REMARK 465 U C 48 REMARK 465 A C 49 REMARK 465 G C 50 REMARK 465 A C 51 REMARK 465 A C 52 REMARK 465 A C 53 REMARK 465 U C 54 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 24 OG REMARK 470 ARG A 25 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 51 OE1 NE2 REMARK 470 SER A 163 OG REMARK 470 LYS A 194 CD CE NZ REMARK 470 LYS A 215 CD CE NZ REMARK 470 LYS A 241 CE NZ REMARK 470 TYR A 263 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 288 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 289 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 300 CD OE1 NE2 REMARK 470 LYS A 303 CE NZ REMARK 470 LYS A 304 CG CD CE NZ REMARK 470 HIS A 384 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 47 CG ND1 CD2 CE1 NE2 REMARK 470 GLN B 48 CG CD OE1 NE2 REMARK 470 ARG B 51 CD NE CZ NH1 NH2 REMARK 470 ASN B 52 CG OD1 ND2 REMARK 470 LYS B 78 CE NZ REMARK 470 LYS B 111 CG CD CE NZ REMARK 470 LYS B 128 CD CE NZ REMARK 470 SER B 150 OG REMARK 470 SER B 156 OG REMARK 470 LYS B 158 CG CD CE NZ REMARK 470 ARG B 161 CD NE CZ NH1 NH2 REMARK 470 LYS B 162 CG CD CE NZ REMARK 470 ARG B 176 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 179 CD OE1 OE2 REMARK 470 GLU B 180 OE1 OE2 REMARK 470 GLU B 182 CG CD OE1 OE2 REMARK 470 LYS B 186 CG CD CE NZ REMARK 470 GLU B 200 CG CD OE1 OE2 REMARK 470 ARG B 207 NE CZ NH1 NH2 REMARK 470 LYS B 211 CD CE NZ REMARK 470 GLU B 245 CG CD OE1 OE2 REMARK 470 LYS B 338 CG CD CE NZ REMARK 470 ARG B 349 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 373 CD1 CD2 REMARK 470 GLU B 396 CD OE1 OE2 REMARK 470 LYS B 399 CD CE NZ REMARK 470 G C 34 N9 C8 N7 C5 C6 O6 N1 REMARK 470 G C 34 C2 N2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 214 CA - CB - CG ANGL. DEV. = 17.7 DEGREES REMARK 500 C C 1 OP1 - P - OP2 ANGL. DEV. = -10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 21 124.61 -170.96 REMARK 500 PRO A 36 2.61 -66.00 REMARK 500 PHE A 95 -60.00 -109.21 REMARK 500 ARG A 128 -168.96 -124.37 REMARK 500 ASP A 221 65.29 -101.96 REMARK 500 LEU B 67 40.39 -106.36 REMARK 500 LYS B 79 31.41 -143.58 REMARK 500 TYR B 107 -8.49 -142.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-52309 RELATED DB: EMDB REMARK 900 MOUSE QTRT1/2 IN COMPLEX WITH MOUSE PRE-TRNA-TYR-1-4 REMARK 900 RELATED ID: EMD-52308 RELATED DB: EMDB DBREF 9HN9 A 11 403 UNP Q9JMA2 TGT_MOUSE 11 403 DBREF 9HN9 B 2 415 UNP B8ZXI1 QTRT2_MOUSE 2 415 DBREF 9HN9 C -1 91 PDB 9HN9 9HN9 -1 91 SEQADV 9HN9 GLY A 9 UNP Q9JMA2 EXPRESSION TAG SEQADV 9HN9 PRO A 10 UNP Q9JMA2 EXPRESSION TAG SEQADV 9HN9 GLY B 0 UNP B8ZXI1 EXPRESSION TAG SEQADV 9HN9 PRO B 1 UNP B8ZXI1 EXPRESSION TAG SEQRES 1 A 395 GLY PRO GLU SER ALA PRO ARG ILE MET ARG LEU VAL ALA SEQRES 2 A 395 GLU CYS SER ARG SER GLY ALA ARG ALA GLY GLU LEU ARG SEQRES 3 A 395 LEU PRO HIS GLY THR VAL ALA THR PRO VAL PHE MET PRO SEQRES 4 A 395 VAL GLY THR GLN ALA THR MET LYS GLY ILE THR THR GLU SEQRES 5 A 395 GLN LEU ASP SER LEU GLY CYS ARG ILE CYS LEU GLY ASN SEQRES 6 A 395 THR TYR HIS LEU GLY LEU ARG PRO GLY PRO GLU LEU ILE SEQRES 7 A 395 ARG LYS ALA GLN GLY LEU HIS GLY PHE MET ASN TRP PRO SEQRES 8 A 395 HIS ASN LEU LEU THR ASP SER GLY GLY PHE GLN MET VAL SEQRES 9 A 395 SER LEU PHE SER LEU SER GLU VAL THR GLU GLU GLY VAL SEQRES 10 A 395 HIS PHE ARG SER PRO TYR ASP GLY GLU GLU THR LEU LEU SEQRES 11 A 395 SER PRO GLU ARG SER VAL GLU ILE GLN ASN ALA LEU GLY SEQRES 12 A 395 SER ASP ILE ILE MET GLN LEU ASP HIS VAL VAL SER SER SEQRES 13 A 395 THR VAL THR GLY PRO LEU VAL GLU GLU ALA MET HIS ARG SEQRES 14 A 395 SER VAL ARG TRP LEU ASP ARG CYS ILE ALA ALA HIS LYS SEQRES 15 A 395 HIS PRO ASP LYS GLN ASN LEU PHE ALA ILE ILE GLN GLY SEQRES 16 A 395 GLY LEU ASN ALA ASP LEU ARG THR THR CYS LEU LYS GLU SEQRES 17 A 395 MET THR LYS ARG ASP VAL PRO GLY PHE ALA ILE GLY GLY SEQRES 18 A 395 LEU SER GLY GLY GLU SER LYS ALA GLN PHE TRP LYS MET SEQRES 19 A 395 VAL ALA LEU SER THR SER MET LEU PRO LYS ASP LYS PRO SEQRES 20 A 395 ARG TYR LEU MET GLY VAL GLY TYR ALA THR ASP LEU VAL SEQRES 21 A 395 VAL CYS VAL ALA LEU GLY CYS ASP MET PHE ASP CYS VAL SEQRES 22 A 395 TYR PRO THR ARG THR ALA ARG PHE GLY SER ALA LEU VAL SEQRES 23 A 395 PRO THR GLY ASN LEU GLN LEU LYS LYS LYS GLN TYR ALA SEQRES 24 A 395 LYS ASP PHE SER PRO ILE ASN PRO GLU CYS PRO CYS PRO SEQRES 25 A 395 THR CYS GLN THR HIS SER ARG ALA PHE LEU HIS ALA LEU SEQRES 26 A 395 LEU HIS SER ASP ASN THR THR ALA LEU HIS HIS LEU THR SEQRES 27 A 395 VAL HIS ASN ILE ALA TYR GLN LEU GLN LEU LEU SER ALA SEQRES 28 A 395 VAL ARG SER SER ILE LEU GLU GLN ARG PHE PRO ASP PHE SEQRES 29 A 395 VAL ARG ASN PHE MET ARG THR MET TYR GLY ASP HIS SER SEQRES 30 A 395 LEU CYS PRO ALA TRP ALA VAL GLU ALA LEU ALA SER VAL SEQRES 31 A 395 GLY ILE MET LEU THR SEQRES 1 B 416 GLY PRO LYS LEU SER LEU ILE LYS VAL VAL ASN GLY CYS SEQRES 2 B 416 ARG LEU GLY LYS ILE GLN ASN LEU GLY LYS ALA GLY ASP SEQRES 3 B 416 CYS THR VAL ASP ILE PRO GLY CYS LEU LEU TYR THR ARG SEQRES 4 B 416 THR GLY SER ALA PRO HIS LEU THR HIS GLN THR LEU ARG SEQRES 5 B 416 ASN ILE HIS GLY VAL PRO GLY ILE ALA GLN LEU THR LEU SEQRES 6 B 416 SER SER LEU ALA GLU HIS HIS GLU VAL LEU ALA GLU TYR SEQRES 7 B 416 LYS LYS GLY VAL GLY SER PHE ILE GLY MET PRO GLU SER SEQRES 8 B 416 LEU PHE TYR CYS SER LEU HIS ASP PRO VAL THR PRO GLY SEQRES 9 B 416 PRO ALA GLY TYR VAL THR SER LYS SER VAL SER VAL TRP SEQRES 10 B 416 GLY PHE GLY GLY ARG VAL GLU MET THR VAL SER LYS PHE SEQRES 11 B 416 MET ALA ILE GLN GLU ALA LEU GLN PRO ASP TRP PHE GLN SEQRES 12 B 416 CYS LEU SER ASP GLY GLU ALA SER CYS ALA GLU THR THR SEQRES 13 B 416 SER ILE LYS ARG ALA ARG LYS SER VAL ASP ARG SER LEU SEQRES 14 B 416 LEU PHE LEU ASP SER CYS LEU ARG LEU GLN GLU GLU SER SEQRES 15 B 416 GLU VAL LEU GLN LYS SER VAL ILE ILE GLY VAL ILE GLU SEQRES 16 B 416 GLY GLY ASP VAL MET GLU GLU ARG LEU ARG SER ALA ARG SEQRES 17 B 416 GLU THR ALA LYS ARG PRO VAL GLY GLY PHE LEU LEU ASP SEQRES 18 B 416 GLY PHE GLN GLY ASP PRO ALA VAL THR GLU THR ARG LEU SEQRES 19 B 416 HIS LEU LEU SER SER VAL THR ALA GLU LEU PRO GLU ASP SEQRES 20 B 416 LYS PRO ARG LEU ILE CYS GLY VAL SER ARG PRO ASP GLU SEQRES 21 B 416 VAL LEU GLU CYS ILE GLU ARG GLY VAL ASP LEU PHE GLU SEQRES 22 B 416 SER PHE PHE PRO TYR GLN VAL THR GLU ARG GLY CYS ALA SEQRES 23 B 416 LEU THR PHE THR PHE ASP CYS GLN LEU ASN PRO GLU GLU SEQRES 24 B 416 THR LEU LEU GLN GLN ASN GLY ILE GLN GLU LYS ILE LYS SEQRES 25 B 416 GLY LEU ASP GLN ALA LYS LYS ILE GLU ALA THR GLY CYS SEQRES 26 B 416 ASN GLN GLU MET THR SER PHE GLU ILE ASN LEU LYS GLU SEQRES 27 B 416 LYS LYS TYR GLN GLU ASP PHE ASP PRO LEU VAL ARG GLY SEQRES 28 B 416 CYS SER CYS TYR CYS CYS LYS ASN HIS THR ARG ALA TYR SEQRES 29 B 416 ILE HIS HIS LEU LEU MET THR ASN GLU LEU LEU ALA GLY SEQRES 30 B 416 VAL LEU LEU MET MET HIS ASN PHE GLU HIS TYR PHE GLY SEQRES 31 B 416 PHE PHE CYS SER ILE ARG GLU ALA LEU LYS ASN ASP THR SEQRES 32 B 416 LEU ALA GLN LEU LYS GLU LEU ILE CYS ARG GLN MET PHE SEQRES 1 C 93 G G C C U U C G A U A G C SEQRES 2 C 93 U C A G U U G G U A G A G SEQRES 3 C 93 C G G A G G A C U G U A G SEQRES 4 C 93 G U C A U U G U U C U A G SEQRES 5 C 93 A A A U C C U U A G G U C SEQRES 6 C 93 G C U G G U U C G A A U C SEQRES 7 C 93 C G G C U C G A A G G A C SEQRES 8 C 93 C A HET 9DG A 501 11 HETNAM 9DG 9-DEAZAGUANINE FORMUL 4 9DG C6 H6 N4 O HELIX 1 AA1 VAL A 48 GLY A 56 1 9 HELIX 2 AA2 THR A 58 LEU A 65 1 8 HELIX 3 AA3 THR A 74 ARG A 80 1 7 HELIX 4 AA4 GLY A 82 GLN A 90 1 9 HELIX 5 AA5 GLN A 90 MET A 96 1 7 HELIX 6 AA6 TYR A 131 GLU A 135 5 5 HELIX 7 AA7 SER A 139 GLY A 151 1 13 HELIX 8 AA8 GLY A 168 HIS A 189 1 22 HELIX 9 AA9 ALA A 207 ARG A 220 1 14 HELIX 10 AB1 SER A 235 LEU A 250 1 16 HELIX 11 AB2 TYR A 263 GLY A 274 1 12 HELIX 12 AB3 CYS A 319 HIS A 325 1 7 HELIX 13 AB4 SER A 326 ASP A 337 1 12 HELIX 14 AB5 ASP A 337 GLU A 366 1 30 HELIX 15 AB6 ARG A 368 GLY A 382 1 15 HELIX 16 AB7 ASP A 383 CYS A 387 5 5 HELIX 17 AB8 PRO A 388 GLY A 399 1 12 HELIX 18 AB9 THR B 46 ILE B 53 1 8 HELIX 19 AC1 ALA B 68 GLU B 76 1 9 HELIX 20 AC2 VAL B 81 GLY B 86 1 6 HELIX 21 AC3 THR B 125 GLN B 137 1 13 HELIX 22 AC4 GLY B 147 CYS B 151 5 5 HELIX 23 AC5 ILE B 157 GLU B 179 1 23 HELIX 24 AC6 SER B 181 LYS B 186 1 6 HELIX 25 AC7 VAL B 198 LYS B 211 1 14 HELIX 26 AC8 THR B 229 LEU B 243 1 15 HELIX 27 AC9 ARG B 256 GLY B 267 1 12 HELIX 28 AD1 PHE B 274 ARG B 282 1 9 HELIX 29 AD2 GLU B 337 GLN B 341 5 5 HELIX 30 AD3 CYS B 353 HIS B 359 1 7 HELIX 31 AD4 THR B 360 ASN B 371 1 12 HELIX 32 AD5 LEU B 373 ASN B 400 1 28 SHEET 1 AA1 3 MET A 17 LEU A 19 0 SHEET 2 AA1 3 GLY A 31 LEU A 35 -1 O GLU A 32 N ARG A 18 SHEET 3 AA1 3 GLY A 38 THR A 42 -1 O THR A 42 N GLY A 31 SHEET 1 AA2 2 VAL A 44 PHE A 45 0 SHEET 2 AA2 2 MET A 277 PHE A 278 1 O PHE A 278 N VAL A 44 SHEET 1 AA3 2 ILE A 69 ASN A 73 0 SHEET 2 AA3 2 ASN A 101 ASP A 105 1 O ASP A 105 N GLY A 72 SHEET 1 AA4 2 VAL A 125 PHE A 127 0 SHEET 2 AA4 2 THR A 136 LEU A 138 -1 O THR A 136 N PHE A 127 SHEET 1 AA5 4 ILE A 154 MET A 156 0 SHEET 2 AA5 4 ASN A 196 ILE A 201 1 O ASN A 196 N ILE A 155 SHEET 3 AA5 4 GLY A 224 ILE A 227 1 O ALA A 226 N ILE A 201 SHEET 4 AA5 4 ARG A 256 LEU A 258 1 O TYR A 257 N ILE A 227 SHEET 1 AA6 2 SER A 291 VAL A 294 0 SHEET 2 AA6 2 GLY A 297 GLN A 300 -1 O LEU A 299 N ALA A 292 SHEET 1 AA7 7 LEU B 35 THR B 37 0 SHEET 2 AA7 7 ILE B 59 THR B 63 1 O GLN B 61 N LEU B 35 SHEET 3 AA7 7 LEU B 91 SER B 95 1 O SER B 95 N LEU B 62 SHEET 4 AA7 7 TRP B 140 GLN B 142 1 O GLN B 142 N CYS B 94 SHEET 5 AA7 7 VAL B 188 ILE B 193 1 O VAL B 188 N PHE B 141 SHEET 6 AA7 7 GLY B 216 LEU B 219 1 O GLY B 216 N GLY B 191 SHEET 7 AA7 7 ARG B 249 ILE B 251 1 O LEU B 250 N LEU B 219 SHEET 1 AA8 2 CYS B 284 LEU B 286 0 SHEET 2 AA8 2 GLU B 332 ASN B 334 -1 O ILE B 333 N ALA B 285 CISPEP 1 THR A 42 PRO A 43 0 3.87 CISPEP 2 ARG A 80 PRO A 81 0 3.24 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 2884 LEU A 402 TER 5340 ASN B 400 TER 6889 A C 91 HETATM 6890 C9 9DG A 501 117.888 136.238 158.160 1.00161.63 C HETATM 6891 C8 9DG A 501 117.920 137.609 158.034 1.00162.80 C HETATM 6892 N7 9DG A 501 117.764 138.141 159.273 1.00161.12 N HETATM 6893 C5 9DG A 501 117.646 137.116 160.167 1.00159.26 C HETATM 6894 C6 9DG A 501 117.453 137.106 161.678 1.00158.46 C HETATM 6895 O6 9DG A 501 117.389 138.132 162.265 1.00159.04 O HETATM 6896 N1 9DG A 501 117.349 135.864 162.380 1.00159.11 N HETATM 6897 C2 9DG A 501 117.430 134.626 161.647 1.00157.94 C HETATM 6898 N2 9DG A 501 117.327 133.361 162.348 1.00157.36 N HETATM 6899 N3 9DG A 501 117.616 134.643 160.198 1.00159.43 N HETATM 6900 C4 9DG A 501 117.721 135.937 159.476 1.00160.65 C CONECT 6890 6891 6900 CONECT 6891 6890 6892 CONECT 6892 6891 6893 CONECT 6893 6892 6894 6900 CONECT 6894 6893 6895 6896 CONECT 6895 6894 CONECT 6896 6894 6897 CONECT 6897 6896 6898 6899 CONECT 6898 6897 CONECT 6899 6897 6900 CONECT 6900 6890 6893 6899 MASTER 328 0 1 32 24 0 0 6 6897 3 11 71 END