HEADER IMMUNE SYSTEM 17-DEC-24 9HR5 TITLE SALMONELLA ENTERICA LAMASSU LMUA NUCLEASE TETRAMER BOUND TO DNA DUPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC-THREE COMPONENT SYSTEMS C-TERMINAL DOMAIN-CONTAINING COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B, C, D; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'- COMPND 8 D(P*CP*TP*GP*AP*TP*TP*CP*AP*GP*CP*AP*GP*TP*TP*GP*AP*AP*TP*CP*AP*GP*AP COMPND 9 *AP*T)-3'); COMPND 10 CHAIN: G; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (25-MER); COMPND 14 CHAIN: H; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TENNESSEE; SOURCE 4 ORGANISM_TAXID: 143221; SOURCE 5 STRAIN: TXSC_TXSC08-19; SOURCE 6 GENE: AHW86_02680, B1277_19165, CC786_01570, DKV27_15550, SOURCE 7 E0563_21145, FG623_013460, GB216_17210; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168; SOURCE 12 ORGANISM_TAXID: 224308; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168; SOURCE 17 ORGANISM_TAXID: 224308; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LAMASSU, RAD50, CAP4, BACTERIAL IMMUNITY, DEFENCE SYSTEM, DNA END KEYWDS 2 BINDING, ABC ATPASE, SMC-LIKE, CAP4 NUCLEASE, PHAGE, PLASMID KEYWDS 3 RESTRICTION, IMMUNE SYSTEM EXPDTA ELECTRON MICROSCOPY AUTHOR Y.LI,S.GRUBER REVDAT 4 24-DEC-25 9HR5 1 JRNL REVDAT 3 29-OCT-25 9HR5 1 JRNL REVDAT 2 22-OCT-25 9HR5 1 JRNL REVDAT 1 01-OCT-25 9HR5 0 JRNL AUTH Y.LI,D.W.ADAMS,H.W.LIU,S.J.SHAW,E.UCHIKAWA,M.JASKOLSKA, JRNL AUTH 2 S.STUTZMANN,L.RIGHI,M.D.SZCZELKUN,M.BLOKESCH,S.GRUBER JRNL TITL STRUCTURE AND ACTIVATION MECHANISM OF A LAMASSU PHAGE AND JRNL TITL 2 PLASMID DEFENSE SYSTEM. JRNL REF NAT.STRUCT.MOL.BIOL. V. 32 2503 2025 JRNL REFN ESSN 1545-9985 JRNL PMID 41087596 JRNL DOI 10.1038/S41594-025-01677-4 REMARK 2 REMARK 2 RESOLUTION. 3.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.260 REMARK 3 NUMBER OF PARTICLES : 148952 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9HR5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1292144059. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : LAMASSU DEFENCE SYSTEM LMUACB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : DECTRIS ARINA (0.2K X 0.2K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ILE A 3 REMARK 465 SER A 4 REMARK 465 LYS A 5 REMARK 465 THR A 6 REMARK 465 ASN A 7 REMARK 465 GLY A 8 REMARK 465 GLN A 9 REMARK 465 SER A 10 REMARK 465 LYS A 11 REMARK 465 PRO A 12 REMARK 465 ILE A 251 REMARK 465 ASP A 252 REMARK 465 ARG A 253 REMARK 465 GLN A 254 REMARK 465 MET A 255 REMARK 465 VAL A 256 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ILE B 3 REMARK 465 SER B 4 REMARK 465 LYS B 5 REMARK 465 THR B 6 REMARK 465 ASN B 7 REMARK 465 GLY B 8 REMARK 465 GLN B 9 REMARK 465 SER B 10 REMARK 465 LYS B 11 REMARK 465 PRO B 12 REMARK 465 LYS B 13 REMARK 465 ARG B 14 REMARK 465 LYS B 15 REMARK 465 THR B 16 REMARK 465 GLU B 17 REMARK 465 VAL B 18 REMARK 465 PRO B 19 REMARK 465 GLY B 20 REMARK 465 GLN B 21 REMARK 465 ALA B 22 REMARK 465 LEU B 23 REMARK 465 GLY B 24 REMARK 465 TYR B 25 REMARK 465 VAL B 49 REMARK 465 LEU B 50 REMARK 465 ASP B 51 REMARK 465 ASP B 52 REMARK 465 VAL B 53 REMARK 465 ALA B 54 REMARK 465 GLN B 55 REMARK 465 GLU B 56 REMARK 465 ASN B 57 REMARK 465 ASN B 58 REMARK 465 SER B 59 REMARK 465 GLY B 60 REMARK 465 ASP B 61 REMARK 465 ILE B 62 REMARK 465 LYS B 63 REMARK 465 PHE B 64 REMARK 465 ILE B 65 REMARK 465 GLN B 66 REMARK 465 SER B 67 REMARK 465 ALA B 68 REMARK 465 SER B 69 REMARK 465 ALA B 70 REMARK 465 LEU B 71 REMARK 465 THR B 72 REMARK 465 ALA B 73 REMARK 465 ASN B 74 REMARK 465 PRO B 75 REMARK 465 ALA B 76 REMARK 465 ALA B 77 REMARK 465 ASP B 78 REMARK 465 ARG B 79 REMARK 465 SER B 111 REMARK 465 ARG B 112 REMARK 465 PRO B 113 REMARK 465 VAL B 114 REMARK 465 GLU B 115 REMARK 465 GLY B 116 REMARK 465 GLY B 154 REMARK 465 ILE B 155 REMARK 465 LEU B 185 REMARK 465 GLY B 186 REMARK 465 SER B 187 REMARK 465 GLY B 188 REMARK 465 SER B 189 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ILE C 3 REMARK 465 SER C 4 REMARK 465 LYS C 5 REMARK 465 THR C 6 REMARK 465 ASN C 7 REMARK 465 GLY C 8 REMARK 465 GLN C 9 REMARK 465 SER C 10 REMARK 465 LYS C 11 REMARK 465 PRO C 12 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 ILE D 3 REMARK 465 SER D 4 REMARK 465 LYS D 5 REMARK 465 THR D 6 REMARK 465 ASN D 7 REMARK 465 GLY D 8 REMARK 465 GLN D 9 REMARK 465 SER D 10 REMARK 465 LYS D 11 REMARK 465 PRO D 12 REMARK 465 LYS D 13 REMARK 465 ARG D 14 REMARK 465 LYS D 15 REMARK 465 THR D 16 REMARK 465 GLU D 17 REMARK 465 VAL D 18 REMARK 465 PRO D 19 REMARK 465 GLY D 20 REMARK 465 GLN D 21 REMARK 465 ALA D 22 REMARK 465 LEU D 23 REMARK 465 GLY D 24 REMARK 465 TYR D 25 REMARK 465 SER D 26 REMARK 465 LEU D 27 REMARK 465 GLN D 28 REMARK 465 PHE D 29 REMARK 465 THR D 30 REMARK 465 LEU D 31 REMARK 465 LEU D 32 REMARK 465 THR D 33 REMARK 465 HIS D 34 REMARK 465 LEU D 35 REMARK 465 LEU D 36 REMARK 465 LEU D 37 REMARK 465 GLN D 38 REMARK 465 ALA D 39 REMARK 465 PRO D 40 REMARK 465 GLU D 41 REMARK 465 GLY D 42 REMARK 465 SER D 43 REMARK 465 LEU D 44 REMARK 465 CYS D 45 REMARK 465 SER D 46 REMARK 465 LEU D 47 REMARK 465 GLU D 48 REMARK 465 VAL D 49 REMARK 465 LEU D 50 REMARK 465 ASP D 51 REMARK 465 ASP D 52 REMARK 465 VAL D 53 REMARK 465 ALA D 54 REMARK 465 GLN D 55 REMARK 465 GLU D 56 REMARK 465 ASN D 57 REMARK 465 ASN D 58 REMARK 465 SER D 59 REMARK 465 GLY D 60 REMARK 465 ASP D 61 REMARK 465 ILE D 62 REMARK 465 LYS D 63 REMARK 465 PHE D 64 REMARK 465 ILE D 65 REMARK 465 GLN D 66 REMARK 465 SER D 67 REMARK 465 ALA D 68 REMARK 465 SER D 69 REMARK 465 ALA D 70 REMARK 465 LEU D 71 REMARK 465 THR D 72 REMARK 465 ALA D 73 REMARK 465 ASN D 74 REMARK 465 PRO D 75 REMARK 465 ALA D 76 REMARK 465 ALA D 77 REMARK 465 ASP D 78 REMARK 465 ARG D 79 REMARK 465 ALA D 80 REMARK 465 LYS D 81 REMARK 465 SER D 82 REMARK 465 LEU D 83 REMARK 465 TRP D 84 REMARK 465 LYS D 85 REMARK 465 THR D 86 REMARK 465 LEU D 87 REMARK 465 SER D 88 REMARK 465 ASN D 89 REMARK 465 TRP D 90 REMARK 465 ILE D 91 REMARK 465 ASP D 92 REMARK 465 LEU D 93 REMARK 465 ALA D 94 REMARK 465 THR D 95 REMARK 465 SER D 96 REMARK 465 PRO D 97 REMARK 465 ASP D 98 REMARK 465 PHE D 99 REMARK 465 GLU D 100 REMARK 465 VAL D 101 REMARK 465 GLU D 102 REMARK 465 LYS D 103 REMARK 465 ALA D 104 REMARK 465 ILE D 105 REMARK 465 PHE D 106 REMARK 465 GLU D 107 REMARK 465 LEU D 108 REMARK 465 TYR D 109 REMARK 465 VAL D 110 REMARK 465 SER D 111 REMARK 465 ARG D 112 REMARK 465 PRO D 113 REMARK 465 VAL D 114 REMARK 465 GLU D 115 REMARK 465 GLY D 116 REMARK 465 SER D 117 REMARK 465 ILE D 118 REMARK 465 VAL D 119 REMARK 465 LYS D 120 REMARK 465 LYS D 121 REMARK 465 PHE D 122 REMARK 465 ASN D 123 REMARK 465 GLU D 124 REMARK 465 ALA D 125 REMARK 465 LYS D 126 REMARK 465 THR D 127 REMARK 465 PRO D 128 REMARK 465 GLU D 129 REMARK 465 ASP D 130 REMARK 465 ALA D 131 REMARK 465 GLN D 132 REMARK 465 GLU D 133 REMARK 465 ALA D 134 REMARK 465 ILE D 135 REMARK 465 THR D 136 REMARK 465 HIS D 137 REMARK 465 ALA D 138 REMARK 465 ARG D 139 REMARK 465 THR D 140 REMARK 465 GLU D 141 REMARK 465 LEU D 142 REMARK 465 TRP D 143 REMARK 465 GLY D 144 REMARK 465 ASP D 145 REMARK 465 SER D 146 REMARK 465 PRO D 147 REMARK 465 HIS D 148 REMARK 465 PHE D 149 REMARK 465 THR D 150 REMARK 465 LEU D 151 REMARK 465 LYS D 152 REMARK 465 ASP D 153 REMARK 465 GLY D 154 REMARK 465 ILE D 155 REMARK 465 SER D 156 REMARK 465 LYS D 157 REMARK 465 GLU D 158 REMARK 465 ILE D 159 REMARK 465 SER D 160 REMARK 465 LYS D 161 REMARK 465 TYR D 162 REMARK 465 VAL D 163 REMARK 465 GLU D 164 REMARK 465 LYS D 165 REMARK 465 VAL D 166 REMARK 465 PHE D 167 REMARK 465 THR D 168 REMARK 465 ALA D 169 REMARK 465 ASP D 170 REMARK 465 GLN D 171 REMARK 465 ASN D 172 REMARK 465 LEU D 173 REMARK 465 LEU D 174 REMARK 465 GLN D 175 REMARK 465 ARG D 176 REMARK 465 LEU D 177 REMARK 465 ILE D 178 REMARK 465 CYS D 179 REMARK 465 ASN D 180 REMARK 465 PHE D 181 REMARK 465 GLN D 182 REMARK 465 LEU D 183 REMARK 465 THR D 184 REMARK 465 LEU D 185 REMARK 465 GLY D 186 REMARK 465 SER D 187 REMARK 465 GLY D 188 REMARK 465 SER D 189 REMARK 465 PRO D 190 REMARK 465 GLN D 191 REMARK 465 ALA D 192 REMARK 465 ASP D 193 REMARK 465 LEU D 194 REMARK 465 GLU D 195 REMARK 465 ALA D 196 REMARK 465 CYS D 197 REMARK 465 VAL D 198 REMARK 465 ARG D 199 REMARK 465 SER D 200 REMARK 465 HIS D 201 REMARK 465 PRO D 202 REMARK 465 VAL D 203 REMARK 465 SER D 204 REMARK 465 PRO D 205 REMARK 465 SER D 206 REMARK 465 LYS D 207 REMARK 465 VAL D 208 REMARK 465 SER D 209 REMARK 465 ASP D 210 REMARK 465 ILE D 211 REMARK 465 THR D 212 REMARK 465 ASN D 213 REMARK 465 TYR D 214 REMARK 465 LEU D 215 REMARK 465 CYS D 216 REMARK 465 GLY D 217 REMARK 465 LYS D 218 REMARK 465 VAL D 219 REMARK 465 LYS D 220 REMARK 465 ARG D 221 REMARK 465 HIS D 222 REMARK 465 ILE D 223 REMARK 465 ASP D 224 REMARK 465 MET D 225 REMARK 465 LEU D 226 REMARK 465 LEU D 227 REMARK 465 GLU D 228 REMARK 465 ALA D 229 REMARK 465 GLU D 230 REMARK 465 LYS D 231 REMARK 465 PRO D 232 REMARK 465 ALA D 233 REMARK 465 VAL D 234 REMARK 465 ILE D 235 REMARK 465 ALA D 236 REMARK 465 ARG D 237 REMARK 465 ASP D 238 REMARK 465 ASP D 239 REMARK 465 PHE D 240 REMARK 465 TYR D 241 REMARK 465 THR D 242 REMARK 465 TRP D 243 REMARK 465 TYR D 244 REMARK 465 LYS D 245 REMARK 465 ALA D 246 REMARK 465 TYR D 247 REMARK 465 VAL D 248 REMARK 465 GLN D 249 REMARK 465 DA G 32 REMARK 465 DT G 33 REMARK 465 DC H 37 REMARK 465 DT H 38 REMARK 465 DG H 39 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER C 156 OP2 DC H 22 2.13 REMARK 500 O SER C 156 OG SER C 160 2.14 REMARK 500 O GLU C 164 OG1 THR C 168 2.18 REMARK 500 OE2 GLU B 107 OG1 THR B 184 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC H 28 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 49 -62.21 -122.89 REMARK 500 ALA A 104 35.16 -143.45 REMARK 500 PRO A 202 72.62 -69.03 REMARK 500 ILE A 284 24.92 -79.52 REMARK 500 LEU A 286 112.84 140.66 REMARK 500 PRO A 287 118.46 -25.07 REMARK 500 GLU A 289 -1.51 -52.47 REMARK 500 GLU A 290 -70.18 -96.95 REMARK 500 ILE A 291 -18.27 -37.64 REMARK 500 GLU A 313 -15.62 -140.75 REMARK 500 GLU A 343 48.63 -85.01 REMARK 500 TYR A 354 -71.30 -61.14 REMARK 500 GLN A 359 37.44 -95.25 REMARK 500 GLN A 365 53.43 38.29 REMARK 500 ALA A 366 -2.80 69.13 REMARK 500 ALA B 125 -74.56 -64.84 REMARK 500 SER C 187 -179.79 -66.96 REMARK 500 PRO C 202 75.88 -69.31 REMARK 500 GLU C 343 49.28 -84.07 REMARK 500 LEU C 385 16.28 59.83 REMARK 500 MET D 255 36.17 37.95 REMARK 500 LEU D 281 -73.52 -68.28 REMARK 500 GLU D 343 49.75 -83.33 REMARK 500 LYS D 344 -174.10 -171.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-52355 RELATED DB: EMDB REMARK 900 SALMONELLA ENTERICA LAMASSU LMUA NUCLEASE TETRAMER BOUND TO DNA REMARK 900 DUPLEX DBREF1 9HR5 A 1 403 UNP A0A3G3DTP5_SALET DBREF2 9HR5 A A0A3G3DTP5 1 403 DBREF1 9HR5 B 1 403 UNP A0A3G3DTP5_SALET DBREF2 9HR5 B A0A3G3DTP5 1 403 DBREF1 9HR5 C 1 403 UNP A0A3G3DTP5_SALET DBREF2 9HR5 C A0A3G3DTP5 1 403 DBREF1 9HR5 D 1 403 UNP A0A3G3DTP5_SALET DBREF2 9HR5 D A0A3G3DTP5 1 403 DBREF 9HR5 G 10 33 PDB 9HR5 9HR5 10 33 DBREF 9HR5 H 15 39 PDB 9HR5 9HR5 15 39 SEQADV 9HR5 ALA A 68 UNP A0A3G3DTP LYS 68 CONFLICT SEQADV 9HR5 ALA B 68 UNP A0A3G3DTP LYS 68 CONFLICT SEQADV 9HR5 ALA C 68 UNP A0A3G3DTP LYS 68 CONFLICT SEQADV 9HR5 ALA D 68 UNP A0A3G3DTP LYS 68 CONFLICT SEQRES 1 A 403 MET ALA ILE SER LYS THR ASN GLY GLN SER LYS PRO LYS SEQRES 2 A 403 ARG LYS THR GLU VAL PRO GLY GLN ALA LEU GLY TYR SER SEQRES 3 A 403 LEU GLN PHE THR LEU LEU THR HIS LEU LEU LEU GLN ALA SEQRES 4 A 403 PRO GLU GLY SER LEU CYS SER LEU GLU VAL LEU ASP ASP SEQRES 5 A 403 VAL ALA GLN GLU ASN ASN SER GLY ASP ILE LYS PHE ILE SEQRES 6 A 403 GLN SER ALA SER ALA LEU THR ALA ASN PRO ALA ALA ASP SEQRES 7 A 403 ARG ALA LYS SER LEU TRP LYS THR LEU SER ASN TRP ILE SEQRES 8 A 403 ASP LEU ALA THR SER PRO ASP PHE GLU VAL GLU LYS ALA SEQRES 9 A 403 ILE PHE GLU LEU TYR VAL SER ARG PRO VAL GLU GLY SER SEQRES 10 A 403 ILE VAL LYS LYS PHE ASN GLU ALA LYS THR PRO GLU ASP SEQRES 11 A 403 ALA GLN GLU ALA ILE THR HIS ALA ARG THR GLU LEU TRP SEQRES 12 A 403 GLY ASP SER PRO HIS PHE THR LEU LYS ASP GLY ILE SER SEQRES 13 A 403 LYS GLU ILE SER LYS TYR VAL GLU LYS VAL PHE THR ALA SEQRES 14 A 403 ASP GLN ASN LEU LEU GLN ARG LEU ILE CYS ASN PHE GLN SEQRES 15 A 403 LEU THR LEU GLY SER GLY SER PRO GLN ALA ASP LEU GLU SEQRES 16 A 403 ALA CYS VAL ARG SER HIS PRO VAL SER PRO SER LYS VAL SEQRES 17 A 403 SER ASP ILE THR ASN TYR LEU CYS GLY LYS VAL LYS ARG SEQRES 18 A 403 HIS ILE ASP MET LEU LEU GLU ALA GLU LYS PRO ALA VAL SEQRES 19 A 403 ILE ALA ARG ASP ASP PHE TYR THR TRP TYR LYS ALA TYR SEQRES 20 A 403 VAL GLN LYS ILE ASP ARG GLN MET VAL LEU SER SER ARG SEQRES 21 A 403 ALA GLN ALA PRO VAL LYS GLU LYS ALA GLN GLU TYR LEU SEQRES 22 A 403 PRO ASP LYS PHE VAL GLN GLN LEU GLU ILE ILE GLY LEU SEQRES 23 A 403 PRO TYR GLU GLU ILE LEU GLY ALA ILE SER ASP TYR LEU SEQRES 24 A 403 MET ALA SER PHE ASP ARG THR ASP TRP ALA ALA ARG GLY SEQRES 25 A 403 GLU VAL ASP GLU THR SER PHE ASP ASP LEU ASP THR ALA SEQRES 26 A 403 LEU GLN ARG THR TRP LYS ASN LYS GLN ARG ILE CYS GLY SEQRES 27 A 403 LEU THR HIS SER GLU LYS SER GLU GLN ASP GLN GLY LYS SEQRES 28 A 403 LEU LEU TYR PHE GLU CYS MET GLN PHE ASN ILE PRO LEU SEQRES 29 A 403 GLN ALA MET SER PRO PRO SER HIS PHE ILE PRO GLY CYS SEQRES 30 A 403 TYR HIS ILE LEU ALA ASP SER LEU ALA VAL GLY TRP HIS SEQRES 31 A 403 PRO ASN TYR THR THR GLN LEU LYS ASN LYS LYS VAL ALA SEQRES 1 B 403 MET ALA ILE SER LYS THR ASN GLY GLN SER LYS PRO LYS SEQRES 2 B 403 ARG LYS THR GLU VAL PRO GLY GLN ALA LEU GLY TYR SER SEQRES 3 B 403 LEU GLN PHE THR LEU LEU THR HIS LEU LEU LEU GLN ALA SEQRES 4 B 403 PRO GLU GLY SER LEU CYS SER LEU GLU VAL LEU ASP ASP SEQRES 5 B 403 VAL ALA GLN GLU ASN ASN SER GLY ASP ILE LYS PHE ILE SEQRES 6 B 403 GLN SER ALA SER ALA LEU THR ALA ASN PRO ALA ALA ASP SEQRES 7 B 403 ARG ALA LYS SER LEU TRP LYS THR LEU SER ASN TRP ILE SEQRES 8 B 403 ASP LEU ALA THR SER PRO ASP PHE GLU VAL GLU LYS ALA SEQRES 9 B 403 ILE PHE GLU LEU TYR VAL SER ARG PRO VAL GLU GLY SER SEQRES 10 B 403 ILE VAL LYS LYS PHE ASN GLU ALA LYS THR PRO GLU ASP SEQRES 11 B 403 ALA GLN GLU ALA ILE THR HIS ALA ARG THR GLU LEU TRP SEQRES 12 B 403 GLY ASP SER PRO HIS PHE THR LEU LYS ASP GLY ILE SER SEQRES 13 B 403 LYS GLU ILE SER LYS TYR VAL GLU LYS VAL PHE THR ALA SEQRES 14 B 403 ASP GLN ASN LEU LEU GLN ARG LEU ILE CYS ASN PHE GLN SEQRES 15 B 403 LEU THR LEU GLY SER GLY SER PRO GLN ALA ASP LEU GLU SEQRES 16 B 403 ALA CYS VAL ARG SER HIS PRO VAL SER PRO SER LYS VAL SEQRES 17 B 403 SER ASP ILE THR ASN TYR LEU CYS GLY LYS VAL LYS ARG SEQRES 18 B 403 HIS ILE ASP MET LEU LEU GLU ALA GLU LYS PRO ALA VAL SEQRES 19 B 403 ILE ALA ARG ASP ASP PHE TYR THR TRP TYR LYS ALA TYR SEQRES 20 B 403 VAL GLN LYS ILE ASP ARG GLN MET VAL LEU SER SER ARG SEQRES 21 B 403 ALA GLN ALA PRO VAL LYS GLU LYS ALA GLN GLU TYR LEU SEQRES 22 B 403 PRO ASP LYS PHE VAL GLN GLN LEU GLU ILE ILE GLY LEU SEQRES 23 B 403 PRO TYR GLU GLU ILE LEU GLY ALA ILE SER ASP TYR LEU SEQRES 24 B 403 MET ALA SER PHE ASP ARG THR ASP TRP ALA ALA ARG GLY SEQRES 25 B 403 GLU VAL ASP GLU THR SER PHE ASP ASP LEU ASP THR ALA SEQRES 26 B 403 LEU GLN ARG THR TRP LYS ASN LYS GLN ARG ILE CYS GLY SEQRES 27 B 403 LEU THR HIS SER GLU LYS SER GLU GLN ASP GLN GLY LYS SEQRES 28 B 403 LEU LEU TYR PHE GLU CYS MET GLN PHE ASN ILE PRO LEU SEQRES 29 B 403 GLN ALA MET SER PRO PRO SER HIS PHE ILE PRO GLY CYS SEQRES 30 B 403 TYR HIS ILE LEU ALA ASP SER LEU ALA VAL GLY TRP HIS SEQRES 31 B 403 PRO ASN TYR THR THR GLN LEU LYS ASN LYS LYS VAL ALA SEQRES 1 C 403 MET ALA ILE SER LYS THR ASN GLY GLN SER LYS PRO LYS SEQRES 2 C 403 ARG LYS THR GLU VAL PRO GLY GLN ALA LEU GLY TYR SER SEQRES 3 C 403 LEU GLN PHE THR LEU LEU THR HIS LEU LEU LEU GLN ALA SEQRES 4 C 403 PRO GLU GLY SER LEU CYS SER LEU GLU VAL LEU ASP ASP SEQRES 5 C 403 VAL ALA GLN GLU ASN ASN SER GLY ASP ILE LYS PHE ILE SEQRES 6 C 403 GLN SER ALA SER ALA LEU THR ALA ASN PRO ALA ALA ASP SEQRES 7 C 403 ARG ALA LYS SER LEU TRP LYS THR LEU SER ASN TRP ILE SEQRES 8 C 403 ASP LEU ALA THR SER PRO ASP PHE GLU VAL GLU LYS ALA SEQRES 9 C 403 ILE PHE GLU LEU TYR VAL SER ARG PRO VAL GLU GLY SER SEQRES 10 C 403 ILE VAL LYS LYS PHE ASN GLU ALA LYS THR PRO GLU ASP SEQRES 11 C 403 ALA GLN GLU ALA ILE THR HIS ALA ARG THR GLU LEU TRP SEQRES 12 C 403 GLY ASP SER PRO HIS PHE THR LEU LYS ASP GLY ILE SER SEQRES 13 C 403 LYS GLU ILE SER LYS TYR VAL GLU LYS VAL PHE THR ALA SEQRES 14 C 403 ASP GLN ASN LEU LEU GLN ARG LEU ILE CYS ASN PHE GLN SEQRES 15 C 403 LEU THR LEU GLY SER GLY SER PRO GLN ALA ASP LEU GLU SEQRES 16 C 403 ALA CYS VAL ARG SER HIS PRO VAL SER PRO SER LYS VAL SEQRES 17 C 403 SER ASP ILE THR ASN TYR LEU CYS GLY LYS VAL LYS ARG SEQRES 18 C 403 HIS ILE ASP MET LEU LEU GLU ALA GLU LYS PRO ALA VAL SEQRES 19 C 403 ILE ALA ARG ASP ASP PHE TYR THR TRP TYR LYS ALA TYR SEQRES 20 C 403 VAL GLN LYS ILE ASP ARG GLN MET VAL LEU SER SER ARG SEQRES 21 C 403 ALA GLN ALA PRO VAL LYS GLU LYS ALA GLN GLU TYR LEU SEQRES 22 C 403 PRO ASP LYS PHE VAL GLN GLN LEU GLU ILE ILE GLY LEU SEQRES 23 C 403 PRO TYR GLU GLU ILE LEU GLY ALA ILE SER ASP TYR LEU SEQRES 24 C 403 MET ALA SER PHE ASP ARG THR ASP TRP ALA ALA ARG GLY SEQRES 25 C 403 GLU VAL ASP GLU THR SER PHE ASP ASP LEU ASP THR ALA SEQRES 26 C 403 LEU GLN ARG THR TRP LYS ASN LYS GLN ARG ILE CYS GLY SEQRES 27 C 403 LEU THR HIS SER GLU LYS SER GLU GLN ASP GLN GLY LYS SEQRES 28 C 403 LEU LEU TYR PHE GLU CYS MET GLN PHE ASN ILE PRO LEU SEQRES 29 C 403 GLN ALA MET SER PRO PRO SER HIS PHE ILE PRO GLY CYS SEQRES 30 C 403 TYR HIS ILE LEU ALA ASP SER LEU ALA VAL GLY TRP HIS SEQRES 31 C 403 PRO ASN TYR THR THR GLN LEU LYS ASN LYS LYS VAL ALA SEQRES 1 D 403 MET ALA ILE SER LYS THR ASN GLY GLN SER LYS PRO LYS SEQRES 2 D 403 ARG LYS THR GLU VAL PRO GLY GLN ALA LEU GLY TYR SER SEQRES 3 D 403 LEU GLN PHE THR LEU LEU THR HIS LEU LEU LEU GLN ALA SEQRES 4 D 403 PRO GLU GLY SER LEU CYS SER LEU GLU VAL LEU ASP ASP SEQRES 5 D 403 VAL ALA GLN GLU ASN ASN SER GLY ASP ILE LYS PHE ILE SEQRES 6 D 403 GLN SER ALA SER ALA LEU THR ALA ASN PRO ALA ALA ASP SEQRES 7 D 403 ARG ALA LYS SER LEU TRP LYS THR LEU SER ASN TRP ILE SEQRES 8 D 403 ASP LEU ALA THR SER PRO ASP PHE GLU VAL GLU LYS ALA SEQRES 9 D 403 ILE PHE GLU LEU TYR VAL SER ARG PRO VAL GLU GLY SER SEQRES 10 D 403 ILE VAL LYS LYS PHE ASN GLU ALA LYS THR PRO GLU ASP SEQRES 11 D 403 ALA GLN GLU ALA ILE THR HIS ALA ARG THR GLU LEU TRP SEQRES 12 D 403 GLY ASP SER PRO HIS PHE THR LEU LYS ASP GLY ILE SER SEQRES 13 D 403 LYS GLU ILE SER LYS TYR VAL GLU LYS VAL PHE THR ALA SEQRES 14 D 403 ASP GLN ASN LEU LEU GLN ARG LEU ILE CYS ASN PHE GLN SEQRES 15 D 403 LEU THR LEU GLY SER GLY SER PRO GLN ALA ASP LEU GLU SEQRES 16 D 403 ALA CYS VAL ARG SER HIS PRO VAL SER PRO SER LYS VAL SEQRES 17 D 403 SER ASP ILE THR ASN TYR LEU CYS GLY LYS VAL LYS ARG SEQRES 18 D 403 HIS ILE ASP MET LEU LEU GLU ALA GLU LYS PRO ALA VAL SEQRES 19 D 403 ILE ALA ARG ASP ASP PHE TYR THR TRP TYR LYS ALA TYR SEQRES 20 D 403 VAL GLN LYS ILE ASP ARG GLN MET VAL LEU SER SER ARG SEQRES 21 D 403 ALA GLN ALA PRO VAL LYS GLU LYS ALA GLN GLU TYR LEU SEQRES 22 D 403 PRO ASP LYS PHE VAL GLN GLN LEU GLU ILE ILE GLY LEU SEQRES 23 D 403 PRO TYR GLU GLU ILE LEU GLY ALA ILE SER ASP TYR LEU SEQRES 24 D 403 MET ALA SER PHE ASP ARG THR ASP TRP ALA ALA ARG GLY SEQRES 25 D 403 GLU VAL ASP GLU THR SER PHE ASP ASP LEU ASP THR ALA SEQRES 26 D 403 LEU GLN ARG THR TRP LYS ASN LYS GLN ARG ILE CYS GLY SEQRES 27 D 403 LEU THR HIS SER GLU LYS SER GLU GLN ASP GLN GLY LYS SEQRES 28 D 403 LEU LEU TYR PHE GLU CYS MET GLN PHE ASN ILE PRO LEU SEQRES 29 D 403 GLN ALA MET SER PRO PRO SER HIS PHE ILE PRO GLY CYS SEQRES 30 D 403 TYR HIS ILE LEU ALA ASP SER LEU ALA VAL GLY TRP HIS SEQRES 31 D 403 PRO ASN TYR THR THR GLN LEU LYS ASN LYS LYS VAL ALA SEQRES 1 G 24 DC DT DG DA DT DT DC DA DG DC DA DG DT SEQRES 2 G 24 DT DG DA DA DT DC DA DG DA DA DT SEQRES 1 H 25 DT DC DT DG DA DT DT DC DA DA DC DT DG SEQRES 2 H 25 DC DT DG DA DA DT DC DA DG DC DT DG HELIX 1 AA1 VAL A 18 GLN A 38 1 21 HELIX 2 AA2 ALA A 80 THR A 95 1 16 HELIX 3 AA3 GLY A 116 ALA A 125 1 10 HELIX 4 AA4 THR A 127 TRP A 143 1 17 HELIX 5 AA5 PHE A 149 ASP A 153 5 5 HELIX 6 AA6 SER A 156 ALA A 169 1 14 HELIX 7 AA7 ASP A 170 PHE A 181 1 12 HELIX 8 AA8 SER A 189 SER A 200 1 12 HELIX 9 AA9 LYS A 207 GLU A 228 1 22 HELIX 10 AB1 ARG A 237 GLN A 249 1 13 HELIX 11 AB2 VAL A 265 GLN A 270 1 6 HELIX 12 AB3 GLU A 271 LEU A 273 5 3 HELIX 13 AB4 ASP A 275 GLU A 282 1 8 HELIX 14 AB5 GLU A 290 ARG A 311 1 22 HELIX 15 AB6 ASP A 315 HIS A 341 1 27 HELIX 16 AB7 SER A 345 GLN A 359 1 15 HELIX 17 AB8 PRO A 363 MET A 367 5 5 HELIX 18 AB9 HIS A 372 SER A 384 1 13 HELIX 19 AC1 ASN A 392 ALA A 403 1 12 HELIX 20 AC2 LEU B 27 GLN B 38 1 12 HELIX 21 AC3 LYS B 81 THR B 95 1 15 HELIX 22 AC4 ILE B 118 ALA B 125 1 8 HELIX 23 AC5 THR B 127 GLY B 144 1 18 HELIX 24 AC6 PHE B 149 ASP B 153 5 5 HELIX 25 AC7 LYS B 157 THR B 168 1 12 HELIX 26 AC8 ASP B 170 ASN B 180 1 11 HELIX 27 AC9 GLN B 191 SER B 200 1 10 HELIX 28 AD1 LYS B 207 ALA B 229 1 23 HELIX 29 AD2 ARG B 237 ASP B 252 1 16 HELIX 30 AD3 VAL B 265 GLN B 270 1 6 HELIX 31 AD4 GLU B 271 LEU B 273 5 3 HELIX 32 AD5 ASP B 275 ILE B 284 1 10 HELIX 33 AD6 PRO B 287 ARG B 311 1 25 HELIX 34 AD7 ASP B 315 HIS B 341 1 27 HELIX 35 AD8 SER B 345 MET B 358 1 14 HELIX 36 AD9 HIS B 372 SER B 384 1 13 HELIX 37 AE1 ASN B 392 ALA B 403 1 12 HELIX 38 AE2 VAL C 18 ALA C 39 1 22 HELIX 39 AE3 ALA C 80 SER C 96 1 17 HELIX 40 AE4 GLY C 116 ALA C 125 1 10 HELIX 41 AE5 THR C 127 GLY C 144 1 18 HELIX 42 AE6 LEU C 151 ILE C 155 5 5 HELIX 43 AE7 SER C 156 THR C 168 1 13 HELIX 44 AE8 ASP C 170 ASN C 180 1 11 HELIX 45 AE9 SER C 189 HIS C 201 1 13 HELIX 46 AF1 LYS C 207 GLU C 228 1 22 HELIX 47 AF2 ARG C 237 ASP C 252 1 16 HELIX 48 AF3 VAL C 265 GLN C 270 1 6 HELIX 49 AF4 GLU C 271 LEU C 273 5 3 HELIX 50 AF5 ASP C 275 ILE C 284 1 10 HELIX 51 AF6 PRO C 287 ARG C 311 1 25 HELIX 52 AF7 ASP C 315 HIS C 341 1 27 HELIX 53 AF8 SER C 345 PHE C 360 1 16 HELIX 54 AF9 HIS C 372 SER C 384 1 13 HELIX 55 AG1 ASN C 392 LYS C 401 1 10 HELIX 56 AG2 LYS D 266 TYR D 272 1 7 HELIX 57 AG3 ASP D 275 GLU D 282 1 8 HELIX 58 AG4 ILE D 283 GLY D 285 5 3 HELIX 59 AG5 PRO D 287 GLY D 312 1 26 HELIX 60 AG6 ASP D 315 HIS D 341 1 27 HELIX 61 AG7 SER D 345 GLN D 359 1 15 HELIX 62 AG8 HIS D 372 SER D 384 1 13 HELIX 63 AG9 ASN D 392 ALA D 403 1 12 SHEET 1 AA1 3 VAL A 53 GLU A 56 0 SHEET 2 AA1 3 LEU A 44 LEU A 47 -1 N SER A 46 O ALA A 54 SHEET 3 AA1 3 VAL A 234 ALA A 236 -1 O ILE A 235 N CYS A 45 SHEET 1 AA2 2 SER B 43 LEU B 44 0 SHEET 2 AA2 2 ILE B 235 ALA B 236 -1 O ILE B 235 N LEU B 44 SHEET 1 AA3 2 PHE B 106 GLU B 107 0 SHEET 2 AA3 2 PHE B 181 GLN B 182 1 O GLN B 182 N PHE B 106 SHEET 1 AA4 4 ILE C 62 ILE C 65 0 SHEET 2 AA4 4 VAL C 53 GLU C 56 -1 N GLN C 55 O LYS C 63 SHEET 3 AA4 4 LEU C 44 LEU C 47 -1 N LEU C 44 O GLU C 56 SHEET 4 AA4 4 VAL C 234 ALA C 236 -1 O ILE C 235 N CYS C 45 CISPEP 1 SER C 146 PRO C 147 0 -3.42 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 3052 ALA A 403 TER 5744 ALA B 403 TER 8847 ALA C 403 TER 10089 ALA D 403 TER 10543 DA G 31 TER 10993 DG H 36 MASTER 533 0 0 63 11 0 0 610987 6 0 128 END