HEADER IMMUNE SYSTEM 24-DEC-24 9HV9 TITLE CRYSTAL STRUCTURE OF FAB34 COMPLEXED WITH A 7-MER PEPTIDE OF FMDV VP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: CAPSID PROTEIN VP1; COMPND 11 CHAIN: A; COMPND 12 SYNONYM: P1D,VIRION PROTEIN 1; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_TAXID: 9913; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 8 ORGANISM_TAXID: 9913; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: FOOT-AND-MOUTH DISEASE VIRUS; SOURCE 14 ORGANISM_TAXID: 12110 KEYWDS FOOT-AND-MOUTH DISEASE VIRUS, CATTLE ANTIBODY, CROSS-REACTIVE, LINEAR KEYWDS 2 EPITOPE, ANTIBODY STRUCTURE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.REN,H.M.E.DUYVESTEYN,D.I.STUART REVDAT 1 14-JAN-26 9HV9 0 JRNL AUTH M.BONNET-DI PLACIDO,D.I.STUART JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF BROADLY JRNL TITL 2 NEUTRALIZING ANTI FOOT-AND-MOUTH DISEASE VIRUS BOVINE JRNL TITL 3 ANTIBODIES FROM A SERIAL VACCINATION STUDY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 86.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 43675 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.670 REMARK 3 FREE R VALUE TEST SET COUNT : 2040 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 86.3700 - 4.4400 1.00 3102 150 0.1690 0.1635 REMARK 3 2 4.4400 - 3.5200 1.00 3034 137 0.1648 0.2099 REMARK 3 3 3.5200 - 3.0800 1.00 2987 141 0.1851 0.2204 REMARK 3 4 3.0800 - 2.8000 1.00 2996 150 0.2134 0.2682 REMARK 3 5 2.8000 - 2.6000 1.00 2940 153 0.1993 0.2303 REMARK 3 6 2.6000 - 2.4400 1.00 2952 159 0.2068 0.2455 REMARK 3 7 2.4400 - 2.3200 1.00 2953 145 0.2203 0.2691 REMARK 3 8 2.3200 - 2.2200 1.00 2928 141 0.2361 0.2785 REMARK 3 9 2.2200 - 2.1300 1.00 2947 147 0.2571 0.3311 REMARK 3 10 2.1300 - 2.0600 1.00 2921 153 0.2738 0.2620 REMARK 3 11 2.0600 - 2.0000 0.99 2937 147 0.2832 0.2917 REMARK 3 12 2.0000 - 1.9400 0.98 2832 142 0.2999 0.3178 REMARK 3 13 1.9400 - 1.8900 0.93 2762 130 0.3615 0.3973 REMARK 3 14 1.8900 - 1.8400 0.72 2118 108 0.4174 0.4158 REMARK 3 15 1.8400 - 1.8000 0.41 1226 37 0.4752 0.5783 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.281 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3427 REMARK 3 ANGLE : 0.601 4670 REMARK 3 CHIRALITY : 0.046 543 REMARK 3 PLANARITY : 0.005 582 REMARK 3 DIHEDRAL : 10.594 1207 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.1058 6.2415 4.6654 REMARK 3 T TENSOR REMARK 3 T11: 0.2843 T22: 0.1773 REMARK 3 T33: 0.2897 T12: 0.0235 REMARK 3 T13: -0.0022 T23: 0.0372 REMARK 3 L TENSOR REMARK 3 L11: 4.9419 L22: 2.6185 REMARK 3 L33: 2.3817 L12: 0.6879 REMARK 3 L13: 0.3742 L23: 0.2515 REMARK 3 S TENSOR REMARK 3 S11: -0.0615 S12: -0.1240 S13: -0.0168 REMARK 3 S21: -0.0366 S22: -0.0279 S23: 0.0241 REMARK 3 S31: 0.0804 S32: 0.1065 S33: 0.1034 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 91 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.3665 3.1604 12.0052 REMARK 3 T TENSOR REMARK 3 T11: 0.3189 T22: 0.3595 REMARK 3 T33: 0.3413 T12: -0.0427 REMARK 3 T13: 0.0064 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.8150 L22: 8.4995 REMARK 3 L33: 7.2275 L12: 1.5394 REMARK 3 L13: 1.4329 L23: -1.3226 REMARK 3 S TENSOR REMARK 3 S11: -0.0482 S12: 0.0163 S13: -0.2555 REMARK 3 S21: 0.2054 S22: 0.0058 S23: 1.1898 REMARK 3 S31: 0.2184 S32: -1.2452 S33: 0.0781 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 111 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4248 1.9299 8.0739 REMARK 3 T TENSOR REMARK 3 T11: 0.3121 T22: 0.2289 REMARK 3 T33: 0.3480 T12: 0.0115 REMARK 3 T13: -0.0252 T23: 0.0536 REMARK 3 L TENSOR REMARK 3 L11: 8.8636 L22: 0.5788 REMARK 3 L33: 3.4443 L12: -0.7495 REMARK 3 L13: -4.4239 L23: 0.6997 REMARK 3 S TENSOR REMARK 3 S11: 0.1144 S12: 0.1812 S13: -0.1113 REMARK 3 S21: 0.0548 S22: -0.1291 S23: -0.0815 REMARK 3 S31: 0.0117 S32: 0.0821 S33: 0.0609 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 135 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0773 -9.1575 11.9380 REMARK 3 T TENSOR REMARK 3 T11: 0.3534 T22: 0.5912 REMARK 3 T33: 0.3478 T12: -0.0051 REMARK 3 T13: 0.0278 T23: 0.0380 REMARK 3 L TENSOR REMARK 3 L11: 3.8715 L22: 4.5871 REMARK 3 L33: 4.4563 L12: 0.0380 REMARK 3 L13: -0.4388 L23: -0.7382 REMARK 3 S TENSOR REMARK 3 S11: -0.0928 S12: -0.5273 S13: -0.2597 REMARK 3 S21: 0.3586 S22: 0.0429 S23: -0.1434 REMARK 3 S31: 0.3612 S32: -0.1027 S33: 0.0708 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 3 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.6999 0.8775 28.1231 REMARK 3 T TENSOR REMARK 3 T11: 0.3100 T22: 0.5653 REMARK 3 T33: 0.2597 T12: -0.0252 REMARK 3 T13: 0.0307 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 4.6790 L22: 4.8855 REMARK 3 L33: 4.4715 L12: -0.5327 REMARK 3 L13: 1.6080 L23: -1.5414 REMARK 3 S TENSOR REMARK 3 S11: 0.1151 S12: -0.8675 S13: -0.0150 REMARK 3 S21: 0.4082 S22: -0.1621 S23: -0.0033 REMARK 3 S31: -0.0630 S32: -0.1781 S33: 0.0116 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 76 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.8728 -0.6329 26.6518 REMARK 3 T TENSOR REMARK 3 T11: 0.3529 T22: 0.3742 REMARK 3 T33: 0.2377 T12: -0.0343 REMARK 3 T13: -0.0092 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 5.8248 L22: 0.4237 REMARK 3 L33: 1.3790 L12: -0.3969 REMARK 3 L13: 0.0413 L23: 0.5303 REMARK 3 S TENSOR REMARK 3 S11: 0.0261 S12: -0.6275 S13: -0.3346 REMARK 3 S21: 0.2276 S22: -0.0839 S23: -0.0381 REMARK 3 S31: 0.1034 S32: -0.0353 S33: 0.0389 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 116 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9194 1.5520 20.9434 REMARK 3 T TENSOR REMARK 3 T11: 0.3411 T22: 0.6263 REMARK 3 T33: 0.3374 T12: 0.0840 REMARK 3 T13: -0.0148 T23: 0.0300 REMARK 3 L TENSOR REMARK 3 L11: 4.0535 L22: 2.7780 REMARK 3 L33: 4.1528 L12: 0.6888 REMARK 3 L13: -1.6114 L23: -1.2363 REMARK 3 S TENSOR REMARK 3 S11: 0.0851 S12: 0.1810 S13: 0.1894 REMARK 3 S21: -0.0302 S22: 0.3557 S23: 0.0759 REMARK 3 S31: -0.0958 S32: -0.3004 S33: -0.4810 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 189 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4480 3.7751 28.5209 REMARK 3 T TENSOR REMARK 3 T11: 0.3625 T22: 0.5956 REMARK 3 T33: 0.2809 T12: 0.0267 REMARK 3 T13: -0.0190 T23: -0.0671 REMARK 3 L TENSOR REMARK 3 L11: 9.2018 L22: 7.2412 REMARK 3 L33: 7.2608 L12: 4.9999 REMARK 3 L13: -3.5985 L23: -3.9153 REMARK 3 S TENSOR REMARK 3 S11: 0.3982 S12: -0.6045 S13: 0.1239 REMARK 3 S21: 0.6923 S22: -0.0978 S23: -0.2483 REMARK 3 S31: -0.5628 S32: 0.6970 S33: -0.2133 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 204 THROUGH 210 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.9901 12.3629 18.9562 REMARK 3 T TENSOR REMARK 3 T11: 0.3419 T22: 0.5118 REMARK 3 T33: 0.4252 T12: 0.0527 REMARK 3 T13: 0.0774 T23: -0.0308 REMARK 3 L TENSOR REMARK 3 L11: 2.2166 L22: 8.7915 REMARK 3 L33: 3.2428 L12: -2.4655 REMARK 3 L13: 1.9308 L23: -5.2221 REMARK 3 S TENSOR REMARK 3 S11: 0.5946 S12: -0.6986 S13: 0.2328 REMARK 3 S21: 0.1896 S22: 0.6059 S23: 0.3765 REMARK 3 S31: -0.3256 S32: -1.0187 S33: -1.0064 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9HV9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1292144286. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97627 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44896 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 87.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE MONOHYDRATE, 0.1 REMARK 280 M SODIUM ACETATE TRIHYDRATE PH 4.5, 50 % V/V PEG 400, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 86.62900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.33950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 86.62900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.33950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -145.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH L 450 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY H 144 REMARK 465 ASP H 145 REMARK 465 LYS H 146 REMARK 465 SER H 147 REMARK 465 THR H 203 REMARK 465 SER H 204 REMARK 465 GLY H 205 REMARK 465 GLY H 231 REMARK 465 LYS H 232 REMARK 465 HIS H 233 REMARK 465 HIS H 234 REMARK 465 HIS H 235 REMARK 465 HIS H 236 REMARK 465 HIS H 237 REMARK 465 HIS H 238 REMARK 465 SER L 2 REMARK 465 SER L 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 15 -8.83 78.73 REMARK 500 CYS H 99 32.62 -143.36 REMARK 500 GLU H 102 -71.37 -123.66 REMARK 500 ASP H 104 32.52 -81.87 REMARK 500 CYS H 142 56.85 -115.41 REMARK 500 SER H 159 70.02 61.01 REMARK 500 ASP L 51 -50.73 70.62 REMARK 500 SER L 172 -4.40 68.49 REMARK 500 ALA A 207 81.30 -153.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG H 306 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU H 29 O REMARK 620 2 VAL H 32 O 81.6 REMARK 620 3 CYS H 52 O 165.0 88.4 REMARK 620 4 HOH H 422 O 107.5 95.7 84.4 REMARK 620 5 HOH H 426 O 96.2 107.0 76.1 149.4 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9HV2 RELATED DB: PDB REMARK 900 RELATED ID: 9HV1 RELATED DB: PDB REMARK 900 RELATED ID: 9HV8 RELATED DB: PDB DBREF 9HV9 H 1 238 PDB 9HV9 9HV9 1 238 DBREF 9HV9 L 2 214 PDB 9HV9 9HV9 2 214 DBREF 9HV9 A 204 210 UNP P03305 POLG_FMDVO 928 934 SEQRES 1 H 238 GLN VAL GLN LEU ARG GLU SER GLY PRO SER LEU VAL LYS SEQRES 2 H 238 PRO SER GLN THR LEU SER LEU THR CYS THR VAL SER GLY SEQRES 3 H 238 PHE SER LEU THR ASP VAL HIS VAL GLY TRP VAL ARG GLN SEQRES 4 H 238 THR PRO GLY LYS ALA LEU GLU TRP VAL GLY VAL ILE CYS SEQRES 5 H 238 ASN ARG GLY ALA ILE GLY TYR ASN PRO ALA LEU GLU SER SEQRES 6 H 238 ARG LEU SER ILE THR GLU ASP ASN SER LYS SER GLN VAL SEQRES 7 H 238 SER LEU SER LEU SER SER VAL THR THR ALA ASP THR ALA SEQRES 8 H 238 THR TYR TYR CYS ALA SER SER CYS ARG THR GLU GLY ASP SEQRES 9 H 238 VAL GLY GLY ASP CYS ASP SER ASP HIS PHE PHE CYS ALA SEQRES 10 H 238 TRP GLY GLN GLY LEU LEU VAL THR VAL SER SER ALA SER SEQRES 11 H 238 THR THR ALA PRO LYS VAL TYR PRO LEU SER SER CYS CYS SEQRES 12 H 238 GLY ASP LYS SER SER SER THR VAL THR LEU GLY CYS LEU SEQRES 13 H 238 VAL SER SER TYR MET PRO GLU PRO VAL THR VAL THR TRP SEQRES 14 H 238 ASN SER GLY ALA LEU LYS SER GLY VAL HIS THR PHE PRO SEQRES 15 H 238 ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER SEQRES 16 H 238 MET VAL THR VAL PRO GLY SER THR SER GLY THR GLN THR SEQRES 17 H 238 PHE THR CYS ASN VAL ALA HIS PRO ALA SER SER THR LYS SEQRES 18 H 238 VAL ASP LYS ALA VAL ASP PRO ARG CYS GLY LYS HIS HIS SEQRES 19 H 238 HIS HIS HIS HIS SEQRES 1 L 213 SER TYR GLU LEU THR GLN PRO THR SER VAL SER VAL ALA SEQRES 2 L 213 LEU GLY GLN THR ALA LYS ILE THR CYS SER GLY ASP LEU SEQRES 3 L 213 LEU ASP ARG GLN TYR ALA GLN TRP TYR GLN GLN LYS PRO SEQRES 4 L 213 GLY GLN GLY PRO VAL ARG VAL ILE TYR LYS ASP SER GLU SEQRES 5 L 213 ARG PRO SER GLY ILE SER ASP ARG PHE SER GLY SER SER SEQRES 6 L 213 SER GLY LYS THR ALA THR LEU THR VAL SER GLY ALA GLN SEQRES 7 L 213 THR GLU ASP GLU ALA ASP TYR TYR CYS HIS SER ALA ASP SEQRES 8 L 213 SER SER HIS TYR PRO VAL PHE GLY SER GLY SER THR LEU SEQRES 9 L 213 THR VAL LEU GLY GLN PRO LYS SER PRO PRO SER VAL THR SEQRES 10 L 213 LEU PHE PRO PRO SER THR GLU GLU LEU ASN GLY ASN LYS SEQRES 11 L 213 ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO GLY SEQRES 12 L 213 SER VAL THR VAL VAL TRP LYS ALA ASP GLY SER THR ILE SEQRES 13 L 213 THR ARG ASN VAL GLU THR THR ARG ALA SER LYS GLN SER SEQRES 14 L 213 ASN SER LYS TYR ALA ALA SER SER TYR LEU SER LEU THR SEQRES 15 L 213 SER SER ASP TRP LYS SER LYS GLY SER TYR SER CYS GLU SEQRES 16 L 213 VAL THR HIS GLU GLY SER THR VAL THR LYS THR VAL LYS SEQRES 17 L 213 PRO SER GLU CYS SER SEQRES 1 A 7 LYS ILE VAL ALA PRO VAL LYS HET SO4 H 301 5 HET SO4 H 302 5 HET GOL H 303 6 HET SO4 H 304 5 HET SO4 H 305 5 HET MG H 306 1 HET SO4 L 301 5 HET SO4 L 302 5 HET SO4 L 303 5 HET GOL L 304 6 HET GOL L 305 6 HET SO4 L 306 5 HET SO4 L 307 5 HET PG4 A 301 13 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 SO4 9(O4 S 2-) FORMUL 6 GOL 3(C3 H8 O3) FORMUL 9 MG MG 2+ FORMUL 17 PG4 C8 H18 O5 FORMUL 18 HOH *166(H2 O) HELIX 1 AA1 SER H 28 VAL H 32 5 5 HELIX 2 AA2 LEU H 63 SER H 65 5 3 HELIX 3 AA3 ASN H 73 LYS H 75 5 3 HELIX 4 AA4 THR H 86 THR H 90 5 5 HELIX 5 AA5 ASP H 112 PHE H 114 5 3 HELIX 6 AA6 SER H 171 ALA H 173 5 3 HELIX 7 AA7 PRO H 216 SER H 219 5 4 HELIX 8 AA8 GLN L 79 GLU L 83 5 5 HELIX 9 AA9 SER L 123 ASN L 128 1 6 HELIX 10 AB1 SER L 184 SER L 189 1 6 HELIX 11 AB2 LYS L 209 CYS L 213 5 5 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA1 4 GLN H 77 LEU H 82 -1 O LEU H 82 N LEU H 18 SHEET 4 AA1 4 LEU H 67 ASP H 72 -1 N THR H 70 O SER H 79 SHEET 1 AA2 6 LEU H 11 VAL H 12 0 SHEET 2 AA2 6 LEU H 122 VAL H 126 1 O THR H 125 N VAL H 12 SHEET 3 AA2 6 ALA H 91 SER H 97 -1 N TYR H 93 O LEU H 122 SHEET 4 AA2 6 VAL H 34 GLN H 39 -1 N VAL H 37 O TYR H 94 SHEET 5 AA2 6 GLU H 46 ASN H 53 -1 O ILE H 51 N VAL H 34 SHEET 6 AA2 6 ALA H 56 TYR H 59 -1 O GLY H 58 N VAL H 50 SHEET 1 AA3 4 LEU H 11 VAL H 12 0 SHEET 2 AA3 4 LEU H 122 VAL H 126 1 O THR H 125 N VAL H 12 SHEET 3 AA3 4 ALA H 91 SER H 97 -1 N TYR H 93 O LEU H 122 SHEET 4 AA3 4 ALA H 117 TRP H 118 -1 O ALA H 117 N SER H 97 SHEET 1 AA4 2 CYS H 109 ASP H 110 0 SHEET 2 AA4 2 ILE A 205 VAL A 206 1 O VAL A 206 N CYS H 109 SHEET 1 AA5 4 LYS H 135 SER H 140 0 SHEET 2 AA5 4 THR H 150 TYR H 160 -1 O SER H 158 N LYS H 135 SHEET 3 AA5 4 TYR H 191 PRO H 200 -1 O TYR H 191 N TYR H 160 SHEET 4 AA5 4 VAL H 178 THR H 180 -1 N HIS H 179 O MET H 196 SHEET 1 AA6 4 LYS H 135 SER H 140 0 SHEET 2 AA6 4 THR H 150 TYR H 160 -1 O SER H 158 N LYS H 135 SHEET 3 AA6 4 TYR H 191 PRO H 200 -1 O TYR H 191 N TYR H 160 SHEET 4 AA6 4 VAL H 184 LEU H 185 -1 N VAL H 184 O SER H 192 SHEET 1 AA7 3 THR H 166 TRP H 169 0 SHEET 2 AA7 3 PHE H 209 HIS H 215 -1 O ASN H 212 N THR H 168 SHEET 3 AA7 3 THR H 220 VAL H 226 -1 O THR H 220 N HIS H 215 SHEET 1 AA8 5 SER L 10 ALA L 14 0 SHEET 2 AA8 5 SER L 103 LEU L 108 1 O LEU L 108 N VAL L 13 SHEET 3 AA8 5 ALA L 84 ALA L 91 -1 N TYR L 86 O SER L 103 SHEET 4 AA8 5 GLN L 34 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA8 5 VAL L 45 ILE L 48 -1 O VAL L 45 N GLN L 37 SHEET 1 AA9 4 SER L 10 ALA L 14 0 SHEET 2 AA9 4 SER L 103 LEU L 108 1 O LEU L 108 N VAL L 13 SHEET 3 AA9 4 ALA L 84 ALA L 91 -1 N TYR L 86 O SER L 103 SHEET 4 AA9 4 PRO L 97 PHE L 99 -1 O VAL L 98 N SER L 90 SHEET 1 AB1 3 ALA L 19 SER L 24 0 SHEET 2 AB1 3 THR L 70 VAL L 75 -1 O ALA L 71 N CYS L 23 SHEET 3 AB1 3 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AB2 4 SER L 116 PHE L 120 0 SHEET 2 AB2 4 LYS L 131 PHE L 141 -1 O VAL L 135 N PHE L 120 SHEET 3 AB2 4 TYR L 174 THR L 183 -1 O LEU L 182 N ALA L 132 SHEET 4 AB2 4 VAL L 161 THR L 163 -1 N GLU L 162 O TYR L 179 SHEET 1 AB3 4 SER L 116 PHE L 120 0 SHEET 2 AB3 4 LYS L 131 PHE L 141 -1 O VAL L 135 N PHE L 120 SHEET 3 AB3 4 TYR L 174 THR L 183 -1 O LEU L 182 N ALA L 132 SHEET 4 AB3 4 SER L 167 LYS L 168 -1 N SER L 167 O ALA L 175 SHEET 1 AB4 4 SER L 155 ILE L 157 0 SHEET 2 AB4 4 THR L 147 ALA L 152 -1 N TRP L 150 O ILE L 157 SHEET 3 AB4 4 TYR L 193 HIS L 199 -1 O GLU L 196 N VAL L 149 SHEET 4 AB4 4 SER L 202 VAL L 208 -1 O SER L 202 N HIS L 199 SSBOND 1 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 2 CYS H 52 CYS H 109 1555 1555 2.04 SSBOND 3 CYS H 99 CYS H 116 1555 1555 2.04 SSBOND 4 CYS H 143 CYS L 213 1555 1555 2.03 SSBOND 5 CYS H 155 CYS H 211 1555 1555 2.03 SSBOND 6 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 7 CYS L 136 CYS L 195 1555 1555 2.03 LINK O LEU H 29 MG MG H 306 1555 1555 2.29 LINK O VAL H 32 MG MG H 306 1555 1555 2.39 LINK O CYS H 52 MG MG H 306 1555 1555 2.42 LINK MG MG H 306 O HOH H 422 1555 1555 2.36 LINK MG MG H 306 O HOH H 426 1555 1555 2.33 CISPEP 1 MET H 161 PRO H 162 0 -5.66 CISPEP 2 GLU H 163 PRO H 164 0 1.94 CISPEP 3 TYR L 142 PRO L 143 0 -0.65 CRYST1 173.258 40.679 71.704 90.00 94.45 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005772 0.000000 0.000449 0.00000 SCALE2 0.000000 0.024583 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013988 0.00000 CONECT 164 736 CONECT 209 3324 CONECT 232 3324 CONECT 410 3324 CONECT 412 827 CONECT 736 164 CONECT 759 887 CONECT 827 412 CONECT 887 759 CONECT 1076 3242 CONECT 1127 1515 CONECT 1515 1127 CONECT 1807 2310 CONECT 2310 1807 CONECT 2658 3109 CONECT 3109 2658 CONECT 3242 1076 CONECT 3298 3299 3300 3301 3302 CONECT 3299 3298 CONECT 3300 3298 CONECT 3301 3298 CONECT 3302 3298 CONECT 3303 3304 3305 3306 3307 CONECT 3304 3303 CONECT 3305 3303 CONECT 3306 3303 CONECT 3307 3303 CONECT 3308 3309 3310 CONECT 3309 3308 CONECT 3310 3308 3311 3312 CONECT 3311 3310 CONECT 3312 3310 3313 CONECT 3313 3312 CONECT 3314 3315 3316 3317 3318 CONECT 3315 3314 CONECT 3316 3314 CONECT 3317 3314 CONECT 3318 3314 CONECT 3319 3320 3321 3322 3323 CONECT 3320 3319 CONECT 3321 3319 CONECT 3322 3319 CONECT 3323 3319 CONECT 3324 209 232 410 3396 CONECT 3324 3400 CONECT 3325 3326 3327 3328 3329 CONECT 3326 3325 CONECT 3327 3325 CONECT 3328 3325 CONECT 3329 3325 CONECT 3330 3331 3332 3333 3334 CONECT 3331 3330 CONECT 3332 3330 CONECT 3333 3330 CONECT 3334 3330 CONECT 3335 3336 3337 3338 3339 CONECT 3336 3335 CONECT 3337 3335 CONECT 3338 3335 CONECT 3339 3335 CONECT 3340 3341 3342 CONECT 3341 3340 CONECT 3342 3340 3343 3344 CONECT 3343 3342 CONECT 3344 3342 3345 CONECT 3345 3344 CONECT 3346 3347 3348 CONECT 3347 3346 CONECT 3348 3346 3349 3350 CONECT 3349 3348 CONECT 3350 3348 3351 CONECT 3351 3350 CONECT 3352 3353 3354 3355 3356 CONECT 3353 3352 CONECT 3354 3352 CONECT 3355 3352 CONECT 3356 3352 CONECT 3357 3358 3359 3360 3361 CONECT 3358 3357 CONECT 3359 3357 CONECT 3360 3357 CONECT 3361 3357 CONECT 3362 3363 CONECT 3363 3362 3364 CONECT 3364 3363 3365 CONECT 3365 3364 3366 CONECT 3366 3365 3367 CONECT 3367 3366 3368 CONECT 3368 3367 3369 CONECT 3369 3368 3370 CONECT 3370 3369 3371 CONECT 3371 3370 3372 CONECT 3372 3371 3373 CONECT 3373 3372 3374 CONECT 3374 3373 CONECT 3396 3324 CONECT 3400 3324 MASTER 419 0 14 11 51 0 0 6 3513 3 97 37 END