HEADER TRANSCRIPTION 13-JAN-25 9HZA TITLE SMAD4 MH2, RESIDUES 272-552 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOTHERS AGAINST DECAPENTAPLEGIC HOMOLOG 4; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: MAD HOMOLOG 4,MOTHERS AGAINST DPP HOMOLOG 4,DELETION TARGET COMPND 5 IN PANCREATIC CARCINOMA 4,SMAD FAMILY MEMBER 4,SMAD 4,SMAD4,HSMAD4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SMAD4, DPC4, MADH4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTION FACTOR, SMAD4 MH2 DOMAIN, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.TORNER,M.CONDEMINAS,R.PLUTA,J.POUS,M.J.MACIAS REVDAT 1 22-JUL-26 9HZA 0 JRNL AUTH C.TORNER,M.CONDEMINAS,R.PLUTA,E.ARAGON,R.J.KHAN, JRNL AUTH 2 P.MARTIN-MALPARTIDA,M.RODRIGUEZ DE REGIL,J.POUS,A.-S.HUMM, JRNL AUTH 3 S.NIEBLING,M.GARCIA-ALAI,J.A.MARQUEZ,A.MARTINEZ,M.J.MACIAS JRNL TITL (RUNNING TITLE:) INSIGHTS INTO THE STRUCTURE-ACTIVITY JRNL TITL 2 RELATIONSHIP OF SMAD4 VARIANTS LINKED TO MYHRE SYNDROME AND JRNL TITL 3 HEREDITARY HEMORRHAGIC TELANGIECTASIA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21RC1_5107 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 99.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 84.1 REMARK 3 NUMBER OF REFLECTIONS : 52098 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2613 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 99.6000 - 5.4300 1.00 3328 156 0.2365 0.2380 REMARK 3 2 5.4300 - 4.3100 1.00 3163 179 0.1487 0.1683 REMARK 3 3 4.3100 - 3.7600 1.00 3103 198 0.1511 0.1739 REMARK 3 4 3.7600 - 3.4200 1.00 3130 156 0.1617 0.2088 REMARK 3 5 3.4200 - 3.1700 1.00 3109 155 0.1731 0.2037 REMARK 3 6 3.1700 - 2.9900 1.00 3120 137 0.1951 0.2369 REMARK 3 7 2.9900 - 2.8400 0.99 3065 166 0.1963 0.2193 REMARK 3 8 2.8400 - 2.7100 0.99 3011 171 0.1916 0.2081 REMARK 3 9 2.7100 - 2.6100 0.98 3019 164 0.1967 0.2056 REMARK 3 10 2.6100 - 2.5200 0.96 2977 158 0.2288 0.2610 REMARK 3 11 2.5200 - 2.4400 0.94 2893 151 0.2344 0.2582 REMARK 3 12 2.4400 - 2.3700 0.93 2873 127 0.2237 0.2434 REMARK 3 13 2.3700 - 2.3100 0.92 2803 146 0.2230 0.2682 REMARK 3 14 2.3100 - 2.2500 0.89 2766 146 0.2365 0.2936 REMARK 3 15 2.2500 - 2.2000 0.83 2520 143 0.2408 0.2989 REMARK 3 16 2.2000 - 2.1500 0.67 2046 114 0.2586 0.2963 REMARK 3 17 2.1500 - 2.1100 0.45 1359 73 0.2688 0.2821 REMARK 3 18 2.1100 - 2.0700 0.25 755 47 0.2644 0.2578 REMARK 3 19 2.0700 - 2.0300 0.15 445 26 0.2715 0.2497 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.203 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5535 REMARK 3 ANGLE : 0.835 7510 REMARK 3 CHIRALITY : 0.054 794 REMARK 3 PLANARITY : 0.013 973 REMARK 3 DIHEDRAL : 15.164 2008 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 506 THROUGH 550 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3094 -30.0087 -25.4691 REMARK 3 T TENSOR REMARK 3 T11: 0.2372 T22: 0.3852 REMARK 3 T33: 0.3768 T12: 0.0151 REMARK 3 T13: 0.0905 T23: 0.0743 REMARK 3 L TENSOR REMARK 3 L11: 3.8659 L22: 2.2668 REMARK 3 L33: 2.0631 L12: 0.2914 REMARK 3 L13: 1.8901 L23: 0.5394 REMARK 3 S TENSOR REMARK 3 S11: -0.1104 S12: -0.0249 S13: 0.6178 REMARK 3 S21: -0.0148 S22: -0.0447 S23: 0.2449 REMARK 3 S31: -0.3621 S32: -0.4634 S33: 0.0465 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 286 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7153 -42.1300 -31.7217 REMARK 3 T TENSOR REMARK 3 T11: 0.1943 T22: 0.4018 REMARK 3 T33: 0.2445 T12: 0.0128 REMARK 3 T13: 0.0033 T23: 0.0942 REMARK 3 L TENSOR REMARK 3 L11: 1.5895 L22: 3.3653 REMARK 3 L33: 1.9469 L12: -0.2118 REMARK 3 L13: 0.3195 L23: 0.0593 REMARK 3 S TENSOR REMARK 3 S11: 0.0853 S12: 0.0520 S13: -0.0111 REMARK 3 S21: -0.0506 S22: -0.0207 S23: 0.1740 REMARK 3 S31: 0.1493 S32: 0.1365 S33: -0.0573 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 374 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7072 -36.1850 -34.0922 REMARK 3 T TENSOR REMARK 3 T11: 0.1938 T22: 0.6416 REMARK 3 T33: 0.3879 T12: -0.0156 REMARK 3 T13: -0.0698 T23: 0.1864 REMARK 3 L TENSOR REMARK 3 L11: 4.4371 L22: 6.6879 REMARK 3 L33: 3.4734 L12: -0.3014 REMARK 3 L13: -2.1516 L23: 0.1255 REMARK 3 S TENSOR REMARK 3 S11: 0.1545 S12: 0.3415 S13: 0.4330 REMARK 3 S21: -0.7482 S22: -0.0799 S23: -1.3803 REMARK 3 S31: -0.2385 S32: 0.5691 S33: -0.0299 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 393 THROUGH 439 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2065 -47.1922 -23.5744 REMARK 3 T TENSOR REMARK 3 T11: 0.2519 T22: 0.4465 REMARK 3 T33: 0.3482 T12: 0.0968 REMARK 3 T13: -0.0429 T23: 0.0948 REMARK 3 L TENSOR REMARK 3 L11: 2.6431 L22: 2.3389 REMARK 3 L33: 3.5547 L12: 0.8537 REMARK 3 L13: -0.6327 L23: -0.7394 REMARK 3 S TENSOR REMARK 3 S11: -0.0690 S12: -0.0598 S13: 0.0099 REMARK 3 S21: 0.1566 S22: -0.0676 S23: -0.2765 REMARK 3 S31: 0.1364 S32: 0.7106 S33: 0.2026 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 440 THROUGH 464 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9156 -55.5295 -6.6646 REMARK 3 T TENSOR REMARK 3 T11: 0.3687 T22: 0.4910 REMARK 3 T33: 0.3858 T12: 0.0387 REMARK 3 T13: -0.0711 T23: 0.1351 REMARK 3 L TENSOR REMARK 3 L11: 4.2629 L22: 3.9832 REMARK 3 L33: 8.2592 L12: 1.1161 REMARK 3 L13: -1.4656 L23: -0.6979 REMARK 3 S TENSOR REMARK 3 S11: 0.0951 S12: -0.5837 S13: -0.1952 REMARK 3 S21: 0.4202 S22: -0.2534 S23: 0.0977 REMARK 3 S31: -0.4077 S32: -0.4339 S33: -0.0905 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 465 THROUGH 491 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.7661 -48.5475 2.3342 REMARK 3 T TENSOR REMARK 3 T11: 0.7343 T22: 0.8153 REMARK 3 T33: 0.5174 T12: -0.0490 REMARK 3 T13: 0.0857 T23: 0.1539 REMARK 3 L TENSOR REMARK 3 L11: 3.0613 L22: 5.6173 REMARK 3 L33: 5.1306 L12: 2.7754 REMARK 3 L13: 0.7308 L23: -3.2372 REMARK 3 S TENSOR REMARK 3 S11: 0.1161 S12: 0.6558 S13: 0.8003 REMARK 3 S21: -0.0324 S22: 0.3505 S23: 0.2156 REMARK 3 S31: 1.4266 S32: -0.0362 S33: -0.5227 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 492 THROUGH 523 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3166 -37.1640 -19.7953 REMARK 3 T TENSOR REMARK 3 T11: 0.3303 T22: 0.4633 REMARK 3 T33: 0.3343 T12: -0.0016 REMARK 3 T13: -0.1060 T23: 0.0375 REMARK 3 L TENSOR REMARK 3 L11: 4.1181 L22: 8.7179 REMARK 3 L33: 2.7884 L12: 0.7818 REMARK 3 L13: 0.3384 L23: -2.4649 REMARK 3 S TENSOR REMARK 3 S11: 0.0609 S12: -0.8251 S13: 0.1337 REMARK 3 S21: 0.9831 S22: -0.3832 S23: -0.7636 REMARK 3 S31: -0.4059 S32: 0.4227 S33: 0.2525 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 524 THROUGH 549 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9617 -52.4276 -15.8142 REMARK 3 T TENSOR REMARK 3 T11: 0.2906 T22: 0.4464 REMARK 3 T33: 0.3951 T12: 0.0512 REMARK 3 T13: 0.0177 T23: 0.1346 REMARK 3 L TENSOR REMARK 3 L11: 1.7241 L22: 3.4301 REMARK 3 L33: 2.5935 L12: 0.7628 REMARK 3 L13: 0.5402 L23: -0.0470 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: -0.5647 S13: -0.2744 REMARK 3 S21: 0.5166 S22: -0.0299 S23: 0.2440 REMARK 3 S31: 0.2596 S32: -0.2278 S33: 0.0596 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 286 THROUGH 321 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1688 -24.2519 -55.0683 REMARK 3 T TENSOR REMARK 3 T11: 0.3325 T22: 0.5579 REMARK 3 T33: 0.3432 T12: -0.0602 REMARK 3 T13: 0.0052 T23: 0.0995 REMARK 3 L TENSOR REMARK 3 L11: 2.5448 L22: 5.9423 REMARK 3 L33: 2.9926 L12: -2.3563 REMARK 3 L13: -1.1305 L23: 0.5375 REMARK 3 S TENSOR REMARK 3 S11: 0.1281 S12: 0.4824 S13: -0.0243 REMARK 3 S21: -0.8804 S22: 0.0851 S23: 0.1563 REMARK 3 S31: -0.2242 S32: -0.1580 S33: -0.1740 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 322 THROUGH 363 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2607 -31.6924 -40.8599 REMARK 3 T TENSOR REMARK 3 T11: 0.2337 T22: 0.3541 REMARK 3 T33: 0.2956 T12: -0.0058 REMARK 3 T13: -0.0105 T23: 0.1596 REMARK 3 L TENSOR REMARK 3 L11: 2.0501 L22: 4.2457 REMARK 3 L33: 5.1190 L12: -1.0027 REMARK 3 L13: -1.8328 L23: 3.2512 REMARK 3 S TENSOR REMARK 3 S11: 0.0813 S12: 0.1229 S13: -0.2524 REMARK 3 S21: 0.0637 S22: -0.0861 S23: 0.1131 REMARK 3 S31: 0.0110 S32: -0.3502 S33: 0.0035 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 364 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6328 -23.0492 -36.5852 REMARK 3 T TENSOR REMARK 3 T11: 0.2618 T22: 0.3599 REMARK 3 T33: 0.3933 T12: 0.0388 REMARK 3 T13: 0.0207 T23: 0.1860 REMARK 3 L TENSOR REMARK 3 L11: 3.2323 L22: 1.4576 REMARK 3 L33: 7.8065 L12: 0.0306 REMARK 3 L13: 0.2342 L23: 1.5345 REMARK 3 S TENSOR REMARK 3 S11: 0.2685 S12: -0.0777 S13: 0.2078 REMARK 3 S21: 0.0246 S22: 0.0425 S23: 0.2777 REMARK 3 S31: -0.1597 S32: -1.2585 S33: -0.2859 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 393 THROUGH 439 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9842 -18.5932 -51.9934 REMARK 3 T TENSOR REMARK 3 T11: 0.3130 T22: 0.4170 REMARK 3 T33: 0.2971 T12: 0.0303 REMARK 3 T13: 0.0198 T23: 0.1720 REMARK 3 L TENSOR REMARK 3 L11: 2.8381 L22: 2.5866 REMARK 3 L33: 2.1663 L12: -0.4956 REMARK 3 L13: -0.6580 L23: 0.2649 REMARK 3 S TENSOR REMARK 3 S11: 0.1011 S12: 0.4819 S13: 0.3757 REMARK 3 S21: -0.2555 S22: 0.0349 S23: 0.1083 REMARK 3 S31: -0.3230 S32: -0.1627 S33: -0.1173 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 440 THROUGH 457 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3174 -25.9322 -54.3478 REMARK 3 T TENSOR REMARK 3 T11: 0.3586 T22: 0.5253 REMARK 3 T33: 0.2691 T12: -0.0237 REMARK 3 T13: 0.0513 T23: 0.1261 REMARK 3 L TENSOR REMARK 3 L11: 8.1902 L22: 7.9893 REMARK 3 L33: 2.1894 L12: 1.5887 REMARK 3 L13: 1.7526 L23: -2.1928 REMARK 3 S TENSOR REMARK 3 S11: 0.3612 S12: -0.7532 S13: -0.3334 REMARK 3 S21: 0.2223 S22: -0.4048 S23: -0.5039 REMARK 3 S31: 0.2039 S32: 0.2370 S33: 0.0568 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 458 THROUGH 505 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6366 -23.6137 -43.7751 REMARK 3 T TENSOR REMARK 3 T11: 0.3224 T22: 0.4733 REMARK 3 T33: 0.3747 T12: -0.0559 REMARK 3 T13: -0.0218 T23: 0.1221 REMARK 3 L TENSOR REMARK 3 L11: 9.2596 L22: 4.8760 REMARK 3 L33: 4.2781 L12: -6.2748 REMARK 3 L13: -3.8053 L23: 1.2263 REMARK 3 S TENSOR REMARK 3 S11: -0.2045 S12: -0.7031 S13: 0.7706 REMARK 3 S21: 0.3934 S22: 0.1113 S23: -0.6542 REMARK 3 S31: -0.1548 S32: 0.9509 S33: -0.0267 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 506 THROUGH 523 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6346 -11.8595 -37.6381 REMARK 3 T TENSOR REMARK 3 T11: 0.5603 T22: 0.3876 REMARK 3 T33: 0.5428 T12: 0.0493 REMARK 3 T13: 0.1092 T23: 0.1061 REMARK 3 L TENSOR REMARK 3 L11: 2.1318 L22: 7.7096 REMARK 3 L33: 2.2248 L12: 9.0369 REMARK 3 L13: -3.7190 L23: -4.5141 REMARK 3 S TENSOR REMARK 3 S11: 0.2827 S12: 0.1915 S13: 1.2501 REMARK 3 S21: 0.4190 S22: 0.0130 S23: 0.1910 REMARK 3 S31: -1.4019 S32: -0.1241 S33: -0.2831 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 524 THROUGH 545 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0194 -32.0629 -47.2827 REMARK 3 T TENSOR REMARK 3 T11: 0.2772 T22: 0.3862 REMARK 3 T33: 0.2758 T12: -0.0060 REMARK 3 T13: 0.0203 T23: 0.1404 REMARK 3 L TENSOR REMARK 3 L11: 5.7096 L22: 9.5074 REMARK 3 L33: 5.2071 L12: -6.3378 REMARK 3 L13: -3.1795 L23: 2.8551 REMARK 3 S TENSOR REMARK 3 S11: -0.0397 S12: -0.4327 S13: 0.0049 REMARK 3 S21: -0.3535 S22: -0.0025 S23: -0.3967 REMARK 3 S31: 0.2613 S32: 0.8729 S33: 0.0007 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 286 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6984 -42.4083 -22.4033 REMARK 3 T TENSOR REMARK 3 T11: 0.1892 T22: 0.2715 REMARK 3 T33: 0.2461 T12: -0.0181 REMARK 3 T13: 0.0326 T23: 0.0990 REMARK 3 L TENSOR REMARK 3 L11: 3.8563 L22: 2.4372 REMARK 3 L33: 2.3661 L12: 0.1057 REMARK 3 L13: 0.4350 L23: 0.2410 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: -0.0271 S13: -0.1893 REMARK 3 S21: 0.0180 S22: -0.0073 S23: 0.1242 REMARK 3 S31: 0.1457 S32: -0.1652 S33: 0.0439 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 374 THROUGH 439 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6018 -40.8254 -14.6367 REMARK 3 T TENSOR REMARK 3 T11: 0.2574 T22: 0.3920 REMARK 3 T33: 0.3201 T12: -0.0330 REMARK 3 T13: 0.0760 T23: 0.0591 REMARK 3 L TENSOR REMARK 3 L11: 4.4778 L22: 2.5867 REMARK 3 L33: 2.6819 L12: 0.5305 REMARK 3 L13: 0.1945 L23: -0.3649 REMARK 3 S TENSOR REMARK 3 S11: 0.0230 S12: -0.4987 S13: -0.0470 REMARK 3 S21: 0.2883 S22: -0.0419 S23: 0.3637 REMARK 3 S31: 0.1299 S32: -0.3801 S33: 0.0586 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 440 THROUGH 465 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.4113 -24.6369 -32.1025 REMARK 3 T TENSOR REMARK 3 T11: 0.3617 T22: 0.6210 REMARK 3 T33: 0.7395 T12: 0.0813 REMARK 3 T13: 0.1274 T23: 0.1519 REMARK 3 L TENSOR REMARK 3 L11: 3.8725 L22: 2.1263 REMARK 3 L33: 5.9710 L12: -3.5425 REMARK 3 L13: 1.3845 L23: -5.8241 REMARK 3 S TENSOR REMARK 3 S11: 0.1488 S12: 0.3028 S13: 1.0839 REMARK 3 S21: 0.6399 S22: 0.0924 S23: -0.2240 REMARK 3 S31: -0.7814 S32: -0.4541 S33: -0.4037 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 466 THROUGH 491 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2091 -11.1630 -41.5298 REMARK 3 T TENSOR REMARK 3 T11: 0.8994 T22: 0.9828 REMARK 3 T33: 0.9788 T12: 0.0853 REMARK 3 T13: -0.1258 T23: 0.2270 REMARK 3 L TENSOR REMARK 3 L11: 2.1576 L22: 4.9338 REMARK 3 L33: 2.5489 L12: -0.8179 REMARK 3 L13: 0.2863 L23: -1.7588 REMARK 3 S TENSOR REMARK 3 S11: 0.5042 S12: 0.3464 S13: -0.2295 REMARK 3 S21: -0.5722 S22: -0.3331 S23: 0.6227 REMARK 3 S31: -0.0871 S32: 0.1117 S33: -0.1690 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 492 THROUGH 505 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1526 -31.5255 -23.9116 REMARK 3 T TENSOR REMARK 3 T11: 0.2862 T22: 0.3807 REMARK 3 T33: 0.3828 T12: 0.0138 REMARK 3 T13: 0.0998 T23: 0.0650 REMARK 3 L TENSOR REMARK 3 L11: 4.6249 L22: 1.6717 REMARK 3 L33: 3.9018 L12: -0.6975 REMARK 3 L13: 3.6391 L23: -0.6145 REMARK 3 S TENSOR REMARK 3 S11: 0.0366 S12: 0.0507 S13: 0.4599 REMARK 3 S21: 0.1854 S22: 0.0674 S23: 0.1549 REMARK 3 S31: -0.3526 S32: -0.2154 S33: 0.0187 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 286 through 293 or REMARK 3 resid 313 through 458 or resid 491 REMARK 3 through 518 or resid 520 through 522 or REMARK 3 resid 524 through 544)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "C" and (resid 286 through 458 or REMARK 3 resid 491 through 518 or resid 520 REMARK 3 through 522 or resid 524 through 544)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9HZA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1292140784. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC 1.0.5 (20180515), XDS REMARK 200 JAN 10, 2022 (BUILT 20220110) REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4, STARANISO 2.3.24 REMARK 200 (20200129) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52111 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 99.605 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.8 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 41.1 REMARK 200 DATA REDUNDANCY IN SHELL : 8.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.18.2-3874-000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG SMEAR BROAD (MIXTURE OF PEG REMARK 280 400, 550 MME, 600, 1000, 2000, 3350, 4000, 5000 MME, 6000, 8000, REMARK 280 AND 10000), 0.2 M LITHIUM SULFATE, 0.1 M HEPES PH 7.2 200 NL REMARK 280 SAMPLE + 100 NL PRECIPITANT SOLUTION, PH 8.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 70.43150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 70.43150 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 95.97550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 70.43150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.98775 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 70.43150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 143.96325 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 70.43150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 143.96325 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.43150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 47.98775 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 70.43150 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 70.43150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 95.97550 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 70.43150 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 70.43150 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 95.97550 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 70.43150 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 143.96325 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 70.43150 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 47.98775 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 70.43150 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 47.98775 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 70.43150 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 143.96325 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 70.43150 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 70.43150 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 95.97550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 271 REMARK 465 ARG A 272 REMARK 465 THR A 273 REMARK 465 ALA A 274 REMARK 465 PRO A 275 REMARK 465 TYR A 276 REMARK 465 THR A 277 REMARK 465 PRO A 278 REMARK 465 ASN A 279 REMARK 465 LEU A 280 REMARK 465 PRO A 281 REMARK 465 HIS A 282 REMARK 465 HIS A 283 REMARK 465 GLN A 284 REMARK 465 ASN A 285 REMARK 465 HIS A 297 REMARK 465 PRO A 298 REMARK 465 GLY A 299 REMARK 465 HIS A 300 REMARK 465 TYR A 301 REMARK 465 TRP A 302 REMARK 465 PRO A 303 REMARK 465 VAL A 304 REMARK 465 HIS A 305 REMARK 465 ASN A 306 REMARK 465 GLU A 307 REMARK 465 LEU A 308 REMARK 465 ALA A 309 REMARK 465 PHE A 310 REMARK 465 GLN A 311 REMARK 465 PRO A 312 REMARK 465 ALA A 459 REMARK 465 ALA A 460 REMARK 465 GLN A 461 REMARK 465 ALA A 462 REMARK 465 ALA A 463 REMARK 465 ALA A 464 REMARK 465 VAL A 465 REMARK 465 ALA A 466 REMARK 465 GLY A 467 REMARK 465 ASN A 468 REMARK 465 ILE A 469 REMARK 465 PRO A 470 REMARK 465 GLY A 471 REMARK 465 PRO A 472 REMARK 465 GLY A 473 REMARK 465 SER A 474 REMARK 465 VAL A 475 REMARK 465 GLY A 476 REMARK 465 GLY A 477 REMARK 465 ILE A 478 REMARK 465 ALA A 479 REMARK 465 PRO A 480 REMARK 465 ALA A 481 REMARK 465 ILE A 482 REMARK 465 SER A 483 REMARK 465 LEU A 484 REMARK 465 SER A 485 REMARK 465 ALA A 486 REMARK 465 ALA A 487 REMARK 465 ALA A 546 REMARK 465 ASP A 547 REMARK 465 PRO A 548 REMARK 465 GLN A 549 REMARK 465 PRO A 550 REMARK 465 LEU A 551 REMARK 465 ASP A 552 REMARK 465 GLY B 271 REMARK 465 ARG B 272 REMARK 465 THR B 273 REMARK 465 ALA B 274 REMARK 465 PRO B 275 REMARK 465 TYR B 276 REMARK 465 THR B 277 REMARK 465 PRO B 278 REMARK 465 ASN B 279 REMARK 465 LEU B 280 REMARK 465 PRO B 281 REMARK 465 HIS B 282 REMARK 465 HIS B 283 REMARK 465 GLN B 284 REMARK 465 ASN B 285 REMARK 465 PRO B 296 REMARK 465 HIS B 297 REMARK 465 PRO B 298 REMARK 465 GLY B 299 REMARK 465 HIS B 300 REMARK 465 TYR B 301 REMARK 465 TRP B 302 REMARK 465 PRO B 303 REMARK 465 VAL B 304 REMARK 465 HIS B 305 REMARK 465 ASN B 306 REMARK 465 GLU B 307 REMARK 465 LEU B 308 REMARK 465 ALA B 309 REMARK 465 PHE B 310 REMARK 465 GLN B 311 REMARK 465 PRO B 312 REMARK 465 GLY B 467 REMARK 465 ASN B 468 REMARK 465 ILE B 469 REMARK 465 PRO B 470 REMARK 465 GLY B 471 REMARK 465 PRO B 472 REMARK 465 GLY B 473 REMARK 465 SER B 474 REMARK 465 VAL B 475 REMARK 465 GLY B 476 REMARK 465 GLY B 477 REMARK 465 ILE B 478 REMARK 465 ALA B 479 REMARK 465 LEU B 551 REMARK 465 ASP B 552 REMARK 465 GLY C 271 REMARK 465 ARG C 272 REMARK 465 THR C 273 REMARK 465 ALA C 274 REMARK 465 PRO C 275 REMARK 465 TYR C 276 REMARK 465 THR C 277 REMARK 465 PRO C 278 REMARK 465 ASN C 279 REMARK 465 LEU C 280 REMARK 465 PRO C 281 REMARK 465 HIS C 282 REMARK 465 HIS C 283 REMARK 465 GLN C 284 REMARK 465 ASN C 285 REMARK 465 MET C 294 REMARK 465 PRO C 295 REMARK 465 PRO C 296 REMARK 465 HIS C 297 REMARK 465 PRO C 298 REMARK 465 GLY C 299 REMARK 465 HIS C 300 REMARK 465 TYR C 301 REMARK 465 TRP C 302 REMARK 465 PRO C 303 REMARK 465 VAL C 304 REMARK 465 HIS C 305 REMARK 465 ASN C 306 REMARK 465 GLU C 307 REMARK 465 LEU C 308 REMARK 465 ALA C 309 REMARK 465 PHE C 310 REMARK 465 GLN C 311 REMARK 465 PRO C 312 REMARK 465 ALA C 466 REMARK 465 GLY C 467 REMARK 465 ASN C 468 REMARK 465 ILE C 469 REMARK 465 PRO C 470 REMARK 465 GLY C 471 REMARK 465 PRO C 472 REMARK 465 GLY C 473 REMARK 465 SER C 474 REMARK 465 VAL C 475 REMARK 465 GLY C 476 REMARK 465 GLY C 477 REMARK 465 ILE C 478 REMARK 465 ALA C 479 REMARK 465 PRO C 480 REMARK 465 PRO C 550 REMARK 465 LEU C 551 REMARK 465 ASP C 552 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE B 482 CG1 CG2 CD1 REMARK 470 LEU B 484 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 SO4 C 604 O HOH C 701 2.07 REMARK 500 O HOH A 750 O HOH A 769 2.19 REMARK 500 O HOH B 724 O HOH B 725 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU B 417 HH11 ARG B 445 5454 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 331 -127.35 59.80 REMARK 500 TYR A 353 -155.42 -91.03 REMARK 500 ASP A 424 42.71 -98.11 REMARK 500 SER A 432 -8.41 80.82 REMARK 500 VAL A 506 -54.39 76.05 REMARK 500 MET B 331 -127.57 60.23 REMARK 500 TYR B 353 -158.79 -93.77 REMARK 500 ASP B 424 40.88 -99.32 REMARK 500 SER B 432 -7.66 81.55 REMARK 500 VAL B 506 -54.05 76.21 REMARK 500 MET C 331 -126.43 59.79 REMARK 500 TYR C 353 -159.99 -91.66 REMARK 500 ASP C 424 42.59 -98.00 REMARK 500 SER C 432 -8.51 81.45 REMARK 500 VAL C 506 -55.07 76.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG C 496 0.08 SIDE CHAIN REMARK 500 ARG C 497 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 9HZA A 272 552 UNP Q13485 SMAD4_HUMAN 272 552 DBREF 9HZA B 272 552 UNP Q13485 SMAD4_HUMAN 272 552 DBREF 9HZA C 272 552 UNP Q13485 SMAD4_HUMAN 272 552 SEQADV 9HZA GLY A 271 UNP Q13485 EXPRESSION TAG SEQADV 9HZA GLY B 271 UNP Q13485 EXPRESSION TAG SEQADV 9HZA GLY C 271 UNP Q13485 EXPRESSION TAG SEQRES 1 A 282 GLY ARG THR ALA PRO TYR THR PRO ASN LEU PRO HIS HIS SEQRES 2 A 282 GLN ASN GLY HIS LEU GLN HIS HIS PRO PRO MET PRO PRO SEQRES 3 A 282 HIS PRO GLY HIS TYR TRP PRO VAL HIS ASN GLU LEU ALA SEQRES 4 A 282 PHE GLN PRO PRO ILE SER ASN HIS PRO ALA PRO GLU TYR SEQRES 5 A 282 TRP CYS SER ILE ALA TYR PHE GLU MET ASP VAL GLN VAL SEQRES 6 A 282 GLY GLU THR PHE LYS VAL PRO SER SER CYS PRO ILE VAL SEQRES 7 A 282 THR VAL ASP GLY TYR VAL ASP PRO SER GLY GLY ASP ARG SEQRES 8 A 282 PHE CYS LEU GLY GLN LEU SER ASN VAL HIS ARG THR GLU SEQRES 9 A 282 ALA ILE GLU ARG ALA ARG LEU HIS ILE GLY LYS GLY VAL SEQRES 10 A 282 GLN LEU GLU CYS LYS GLY GLU GLY ASP VAL TRP VAL ARG SEQRES 11 A 282 CYS LEU SER ASP HIS ALA VAL PHE VAL GLN SER TYR TYR SEQRES 12 A 282 LEU ASP ARG GLU ALA GLY ARG ALA PRO GLY ASP ALA VAL SEQRES 13 A 282 HIS LYS ILE TYR PRO SER ALA TYR ILE LYS VAL PHE ASP SEQRES 14 A 282 LEU ARG GLN CYS HIS ARG GLN MET GLN GLN GLN ALA ALA SEQRES 15 A 282 THR ALA GLN ALA ALA ALA ALA ALA GLN ALA ALA ALA VAL SEQRES 16 A 282 ALA GLY ASN ILE PRO GLY PRO GLY SER VAL GLY GLY ILE SEQRES 17 A 282 ALA PRO ALA ILE SER LEU SER ALA ALA ALA GLY ILE GLY SEQRES 18 A 282 VAL ASP ASP LEU ARG ARG LEU CYS ILE LEU ARG MET SER SEQRES 19 A 282 PHE VAL LYS GLY TRP GLY PRO ASP TYR PRO ARG GLN SER SEQRES 20 A 282 ILE LYS GLU THR PRO CYS TRP ILE GLU ILE HIS LEU HIS SEQRES 21 A 282 ARG ALA LEU GLN LEU LEU ASP GLU VAL LEU HIS THR MET SEQRES 22 A 282 PRO ILE ALA ASP PRO GLN PRO LEU ASP SEQRES 1 B 282 GLY ARG THR ALA PRO TYR THR PRO ASN LEU PRO HIS HIS SEQRES 2 B 282 GLN ASN GLY HIS LEU GLN HIS HIS PRO PRO MET PRO PRO SEQRES 3 B 282 HIS PRO GLY HIS TYR TRP PRO VAL HIS ASN GLU LEU ALA SEQRES 4 B 282 PHE GLN PRO PRO ILE SER ASN HIS PRO ALA PRO GLU TYR SEQRES 5 B 282 TRP CYS SER ILE ALA TYR PHE GLU MET ASP VAL GLN VAL SEQRES 6 B 282 GLY GLU THR PHE LYS VAL PRO SER SER CYS PRO ILE VAL SEQRES 7 B 282 THR VAL ASP GLY TYR VAL ASP PRO SER GLY GLY ASP ARG SEQRES 8 B 282 PHE CYS LEU GLY GLN LEU SER ASN VAL HIS ARG THR GLU SEQRES 9 B 282 ALA ILE GLU ARG ALA ARG LEU HIS ILE GLY LYS GLY VAL SEQRES 10 B 282 GLN LEU GLU CYS LYS GLY GLU GLY ASP VAL TRP VAL ARG SEQRES 11 B 282 CYS LEU SER ASP HIS ALA VAL PHE VAL GLN SER TYR TYR SEQRES 12 B 282 LEU ASP ARG GLU ALA GLY ARG ALA PRO GLY ASP ALA VAL SEQRES 13 B 282 HIS LYS ILE TYR PRO SER ALA TYR ILE LYS VAL PHE ASP SEQRES 14 B 282 LEU ARG GLN CYS HIS ARG GLN MET GLN GLN GLN ALA ALA SEQRES 15 B 282 THR ALA GLN ALA ALA ALA ALA ALA GLN ALA ALA ALA VAL SEQRES 16 B 282 ALA GLY ASN ILE PRO GLY PRO GLY SER VAL GLY GLY ILE SEQRES 17 B 282 ALA PRO ALA ILE SER LEU SER ALA ALA ALA GLY ILE GLY SEQRES 18 B 282 VAL ASP ASP LEU ARG ARG LEU CYS ILE LEU ARG MET SER SEQRES 19 B 282 PHE VAL LYS GLY TRP GLY PRO ASP TYR PRO ARG GLN SER SEQRES 20 B 282 ILE LYS GLU THR PRO CYS TRP ILE GLU ILE HIS LEU HIS SEQRES 21 B 282 ARG ALA LEU GLN LEU LEU ASP GLU VAL LEU HIS THR MET SEQRES 22 B 282 PRO ILE ALA ASP PRO GLN PRO LEU ASP SEQRES 1 C 282 GLY ARG THR ALA PRO TYR THR PRO ASN LEU PRO HIS HIS SEQRES 2 C 282 GLN ASN GLY HIS LEU GLN HIS HIS PRO PRO MET PRO PRO SEQRES 3 C 282 HIS PRO GLY HIS TYR TRP PRO VAL HIS ASN GLU LEU ALA SEQRES 4 C 282 PHE GLN PRO PRO ILE SER ASN HIS PRO ALA PRO GLU TYR SEQRES 5 C 282 TRP CYS SER ILE ALA TYR PHE GLU MET ASP VAL GLN VAL SEQRES 6 C 282 GLY GLU THR PHE LYS VAL PRO SER SER CYS PRO ILE VAL SEQRES 7 C 282 THR VAL ASP GLY TYR VAL ASP PRO SER GLY GLY ASP ARG SEQRES 8 C 282 PHE CYS LEU GLY GLN LEU SER ASN VAL HIS ARG THR GLU SEQRES 9 C 282 ALA ILE GLU ARG ALA ARG LEU HIS ILE GLY LYS GLY VAL SEQRES 10 C 282 GLN LEU GLU CYS LYS GLY GLU GLY ASP VAL TRP VAL ARG SEQRES 11 C 282 CYS LEU SER ASP HIS ALA VAL PHE VAL GLN SER TYR TYR SEQRES 12 C 282 LEU ASP ARG GLU ALA GLY ARG ALA PRO GLY ASP ALA VAL SEQRES 13 C 282 HIS LYS ILE TYR PRO SER ALA TYR ILE LYS VAL PHE ASP SEQRES 14 C 282 LEU ARG GLN CYS HIS ARG GLN MET GLN GLN GLN ALA ALA SEQRES 15 C 282 THR ALA GLN ALA ALA ALA ALA ALA GLN ALA ALA ALA VAL SEQRES 16 C 282 ALA GLY ASN ILE PRO GLY PRO GLY SER VAL GLY GLY ILE SEQRES 17 C 282 ALA PRO ALA ILE SER LEU SER ALA ALA ALA GLY ILE GLY SEQRES 18 C 282 VAL ASP ASP LEU ARG ARG LEU CYS ILE LEU ARG MET SER SEQRES 19 C 282 PHE VAL LYS GLY TRP GLY PRO ASP TYR PRO ARG GLN SER SEQRES 20 C 282 ILE LYS GLU THR PRO CYS TRP ILE GLU ILE HIS LEU HIS SEQRES 21 C 282 ARG ALA LEU GLN LEU LEU ASP GLU VAL LEU HIS THR MET SEQRES 22 C 282 PRO ILE ALA ASP PRO GLN PRO LEU ASP HET SO4 A 601 5 HET SO4 A 602 5 HET PGE A 603 24 HET EDO A 604 10 HET EDO A 605 10 HET SO4 A 606 5 HET EDO A 607 10 HET SO4 A 608 5 HET SO4 A 609 5 HET EDO B 601 10 HET SO4 B 602 5 HET EDO B 603 10 HET SO4 B 604 5 HET SO4 B 605 5 HET SO4 B 606 5 HET SO4 B 607 5 HET EDO C 601 10 HET EDO C 602 10 HET SO4 C 603 5 HET SO4 C 604 5 HETNAM SO4 SULFATE ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 SO4 12(O4 S 2-) FORMUL 6 PGE C6 H14 O4 FORMUL 7 EDO 7(C2 H6 O2) FORMUL 24 HOH *225(H2 O) HELIX 1 AA1 THR A 373 LEU A 381 1 9 HELIX 2 AA2 SER A 411 GLY A 419 1 9 HELIX 3 AA3 ASP A 439 ALA A 457 1 19 HELIX 4 AA4 GLY A 491 ARG A 497 1 7 HELIX 5 AA5 SER A 517 THR A 521 5 5 HELIX 6 AA6 HIS A 530 MET A 543 1 14 HELIX 7 AA7 THR B 373 HIS B 382 1 10 HELIX 8 AA8 SER B 411 GLY B 419 1 9 HELIX 9 AA9 ASP B 439 ALA B 466 1 28 HELIX 10 AB1 GLY B 491 ARG B 496 1 6 HELIX 11 AB2 SER B 517 THR B 521 5 5 HELIX 12 AB3 HIS B 530 THR B 542 1 13 HELIX 13 AB4 THR C 373 HIS C 382 1 10 HELIX 14 AB5 SER C 411 GLY C 419 1 9 HELIX 15 AB6 ASP C 439 VAL C 465 1 27 HELIX 16 AB7 GLY C 491 ARG C 496 1 6 HELIX 17 AB8 SER C 517 THR C 521 5 5 HELIX 18 AB9 HIS C 530 MET C 543 1 14 SHEET 1 AA1 7 LEU A 288 HIS A 291 0 SHEET 2 AA1 7 VAL A 426 ILE A 429 1 O VAL A 426 N GLN A 289 SHEET 3 AA1 7 VAL A 407 GLN A 410 -1 N VAL A 407 O ILE A 429 SHEET 4 AA1 7 ILE A 500 PHE A 505 -1 O ARG A 502 N GLN A 410 SHEET 5 AA1 7 TRP A 524 LEU A 529 -1 O ILE A 527 N LEU A 501 SHEET 6 AA1 7 TYR A 322 GLU A 330 -1 N PHE A 329 O TRP A 524 SHEET 7 AA1 7 VAL A 333 PRO A 342 -1 O PHE A 339 N ILE A 326 SHEET 1 AA2 5 ARG A 361 CYS A 363 0 SHEET 2 AA2 5 ILE A 347 ASP A 351 1 N THR A 349 O PHE A 362 SHEET 3 AA2 5 VAL A 387 LYS A 392 -1 O LEU A 389 N VAL A 348 SHEET 4 AA2 5 ASP A 396 CYS A 401 -1 O TRP A 398 N GLU A 390 SHEET 5 AA2 5 TYR A 434 PHE A 438 -1 O ILE A 435 N VAL A 399 SHEET 1 AA3 7 LEU B 288 HIS B 291 0 SHEET 2 AA3 7 VAL B 426 ILE B 429 1 O VAL B 426 N GLN B 289 SHEET 3 AA3 7 VAL B 407 GLN B 410 -1 N VAL B 407 O ILE B 429 SHEET 4 AA3 7 ILE B 500 PHE B 505 -1 O ARG B 502 N GLN B 410 SHEET 5 AA3 7 TRP B 524 LEU B 529 -1 O ILE B 527 N LEU B 501 SHEET 6 AA3 7 TYR B 322 GLU B 330 -1 N PHE B 329 O TRP B 524 SHEET 7 AA3 7 VAL B 333 GLN B 334 -1 O VAL B 333 N GLU B 330 SHEET 1 AA4 7 LEU B 288 HIS B 291 0 SHEET 2 AA4 7 VAL B 426 ILE B 429 1 O VAL B 426 N GLN B 289 SHEET 3 AA4 7 VAL B 407 GLN B 410 -1 N VAL B 407 O ILE B 429 SHEET 4 AA4 7 ILE B 500 PHE B 505 -1 O ARG B 502 N GLN B 410 SHEET 5 AA4 7 TRP B 524 LEU B 529 -1 O ILE B 527 N LEU B 501 SHEET 6 AA4 7 TYR B 322 GLU B 330 -1 N PHE B 329 O TRP B 524 SHEET 7 AA4 7 PHE B 339 PRO B 342 -1 O PHE B 339 N ILE B 326 SHEET 1 AA5 5 ARG B 361 CYS B 363 0 SHEET 2 AA5 5 ILE B 347 ASP B 351 1 N THR B 349 O PHE B 362 SHEET 3 AA5 5 VAL B 387 LYS B 392 -1 O LEU B 389 N VAL B 348 SHEET 4 AA5 5 ASP B 396 CYS B 401 -1 O ASP B 396 N LYS B 392 SHEET 5 AA5 5 TYR B 434 PHE B 438 -1 O ILE B 435 N VAL B 399 SHEET 1 AA6 7 LEU C 288 HIS C 291 0 SHEET 2 AA6 7 VAL C 426 ILE C 429 1 O VAL C 426 N GLN C 289 SHEET 3 AA6 7 VAL C 407 GLN C 410 -1 N VAL C 407 O ILE C 429 SHEET 4 AA6 7 ILE C 500 PHE C 505 -1 O ARG C 502 N GLN C 410 SHEET 5 AA6 7 TRP C 524 LEU C 529 -1 O ILE C 527 N LEU C 501 SHEET 6 AA6 7 TYR C 322 GLU C 330 -1 N PHE C 329 O TRP C 524 SHEET 7 AA6 7 VAL C 333 PRO C 342 -1 O PHE C 339 N ILE C 326 SHEET 1 AA7 5 ARG C 361 CYS C 363 0 SHEET 2 AA7 5 ILE C 347 ASP C 351 1 N THR C 349 O PHE C 362 SHEET 3 AA7 5 VAL C 387 LYS C 392 -1 O LEU C 389 N VAL C 348 SHEET 4 AA7 5 ASP C 396 CYS C 401 -1 O TRP C 398 N GLU C 390 SHEET 5 AA7 5 TYR C 434 PHE C 438 -1 O ILE C 435 N VAL C 399 CRYST1 140.863 140.863 191.951 90.00 90.00 90.00 I 41 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007099 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007099 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005210 0.00000 MTRIX1 1 -0.421989 0.768338 -0.481229 11.67507 1 MTRIX2 1 -0.243244 0.415389 0.876518 5.65888 1 MTRIX3 1 0.873360 0.486937 0.011604 -12.22704 1 CONECT1048810489104901049110492 CONECT1048910488 CONECT1049010488 CONECT1049110488 CONECT1049210488 CONECT1049310494104951049610497 CONECT1049410493 CONECT1049510493 CONECT1049610493 CONECT1049710493 CONECT1049810499105001050810509 CONECT104991049810510 CONECT1050010498105011051110512 CONECT105011050010502 CONECT1050210501105031051310514 CONECT1050310502105071051510516 CONECT105041050510517 CONECT1050510504105061051810519 CONECT1050610505105071052010521 CONECT105071050310506 CONECT1050810498 CONECT1050910498 CONECT1051010499 CONECT1051110500 CONECT1051210500 CONECT1051310502 CONECT1051410502 CONECT1051510503 CONECT1051610503 CONECT1051710504 CONECT1051810505 CONECT1051910505 CONECT1052010506 CONECT1052110506 CONECT1052210523105241052610527 CONECT105231052210528 CONECT1052410522105251052910530 CONECT105251052410531 CONECT1052610522 CONECT1052710522 CONECT1052810523 CONECT1052910524 CONECT1053010524 CONECT1053110525 CONECT1053210533105341053610537 CONECT105331053210538 CONECT1053410532105351053910540 CONECT105351053410541 CONECT1053610532 CONECT1053710532 CONECT1053810533 CONECT1053910534 CONECT1054010534 CONECT1054110535 CONECT1054210543105441054510546 CONECT1054310542 CONECT1054410542 CONECT1054510542 CONECT1054610542 CONECT1054710548105491055110552 CONECT105481054710553 CONECT1054910547105501055410555 CONECT105501054910556 CONECT1055110547 CONECT1055210547 CONECT1055310548 CONECT1055410549 CONECT1055510549 CONECT1055610550 CONECT1055710558105591056010561 CONECT1055810557 CONECT1055910557 CONECT1056010557 CONECT1056110557 CONECT1056210563105641056510566 CONECT1056310562 CONECT1056410562 CONECT1056510562 CONECT1056610562 CONECT1056710568105691057110572 CONECT105681056710573 CONECT1056910567105701057410575 CONECT105701056910576 CONECT1057110567 CONECT1057210567 CONECT1057310568 CONECT1057410569 CONECT1057510569 CONECT1057610570 CONECT1057710578105791058010581 CONECT1057810577 CONECT1057910577 CONECT1058010577 CONECT1058110577 CONECT1058210583105841058610587 CONECT105831058210588 CONECT1058410582105851058910590 CONECT105851058410591 CONECT1058610582 CONECT1058710582 CONECT1058810583 CONECT1058910584 CONECT1059010584 CONECT1059110585 CONECT1059210593105941059510596 CONECT1059310592 CONECT1059410592 CONECT1059510592 CONECT1059610592 CONECT1059710598105991060010601 CONECT1059810597 CONECT1059910597 CONECT1060010597 CONECT1060110597 CONECT1060210603106041060510606 CONECT1060310602 CONECT1060410602 CONECT1060510602 CONECT1060610602 CONECT1060710608106091061010611 CONECT1060810607 CONECT1060910607 CONECT1061010607 CONECT1061110607 CONECT1061210613106141061610617 CONECT106131061210618 CONECT1061410612106151061910620 CONECT106151061410621 CONECT1061610612 CONECT1061710612 CONECT1061810613 CONECT1061910614 CONECT1062010614 CONECT1062110615 CONECT1062210623106241062610627 CONECT106231062210628 CONECT1062410622106251062910630 CONECT106251062410631 CONECT1062610622 CONECT1062710622 CONECT1062810623 CONECT1062910624 CONECT1063010624 CONECT1063110625 CONECT1063210633106341063510636 CONECT1063310632 CONECT1063410632 CONECT1063510632 CONECT1063610632 CONECT1063710638106391064010641 CONECT1063810637 CONECT1063910637 CONECT1064010637 CONECT1064110637 MASTER 850 0 20 18 43 0 0 9 5630 3 154 66 END