HEADER CELL ADHESION 17-JAN-25 9I25 TITLE WXLIP FROM ENTEROCOCCUS FAECIUM LOCUS A BOUND TO LONG WXL COMPND MOL_ID: 1; COMPND 2 MOLECULE: EFMWXLIP1; COMPND 3 CHAIN: C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: WXL DOMAIN SURFACE PROTEIN; COMPND 7 CHAIN: A; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECIUM DO; SOURCE 3 ORGANISM_TAXID: 333849; SOURCE 4 GENE: EFLFYP64_00745; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECIUM DO; SOURCE 9 ORGANISM_TAXID: 333849; SOURCE 10 GENE: HMPREF0351_12114; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS WXL, VIRULENCE, PEPTIDOGLYCAN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR M.P.WILLIAMSON,M.U.HASSAN REVDAT 1 28-JAN-26 9I25 0 JRNL AUTH M.P.WILLIAMSON,M.U.HASSAN JRNL TITL INTERACTIONS AND FUNCTION OF THE BACTERIAL WXL PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 32871 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.132 REMARK 3 FREE R VALUE TEST SET COUNT : 1687 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.96 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2273 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.4010 REMARK 3 BIN FREE R VALUE SET COUNT : 135 REMARK 3 BIN FREE R VALUE : 0.4030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2068 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08200 REMARK 3 B22 (A**2) : 0.08200 REMARK 3 B33 (A**2) : -0.26500 REMARK 3 B12 (A**2) : 0.04100 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.131 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.177 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.012 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2106 ; 0.015 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2023 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2860 ; 2.312 ; 1.642 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4671 ; 0.762 ; 1.569 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 261 ; 9.276 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 8 ;11.734 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 364 ;17.067 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 331 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2437 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 455 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 319 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 43 ; 0.207 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1015 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 98 ; 0.229 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1053 ; 3.772 ; 2.669 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1053 ; 3.769 ; 2.669 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1311 ; 5.472 ; 4.757 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1312 ; 5.470 ; 4.756 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1053 ; 4.720 ; 3.063 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1054 ; 4.718 ; 3.063 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1549 ; 6.961 ; 5.404 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1550 ; 6.959 ; 5.403 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 263 REMARK 3 ORIGIN FOR THE GROUP (A): 32.0819 -22.9191 0.0478 REMARK 3 T TENSOR REMARK 3 T11: 0.0484 T22: 0.0154 REMARK 3 T33: 0.3516 T12: 0.0033 REMARK 3 T13: 0.0188 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 3.7216 L22: 0.8508 REMARK 3 L33: 0.5967 L12: 0.4055 REMARK 3 L13: 1.1002 L23: -0.0097 REMARK 3 S TENSOR REMARK 3 S11: -0.0448 S12: -0.1664 S13: 0.0973 REMARK 3 S21: 0.0491 S22: -0.0170 S23: 0.0504 REMARK 3 S31: -0.0900 S32: -0.0813 S33: 0.0618 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): 34.8442 -13.1220 5.6776 REMARK 3 T TENSOR REMARK 3 T11: 0.2348 T22: 0.1044 REMARK 3 T33: 0.2809 T12: 0.0114 REMARK 3 T13: -0.0053 T23: 0.0361 REMARK 3 L TENSOR REMARK 3 L11: 6.1863 L22: 2.4305 REMARK 3 L33: 0.0802 L12: -0.2369 REMARK 3 L13: 0.2757 L23: 0.3929 REMARK 3 S TENSOR REMARK 3 S11: -0.2781 S12: -0.3963 S13: 0.2818 REMARK 3 S21: 0.4698 S22: 0.2568 S23: -0.0589 REMARK 3 S31: 0.0666 S32: 0.0252 S33: 0.0214 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9I25 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1292144754. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-23 REMARK 200 TEMPERATURE (KELVIN) : 300 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97622 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32902 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 54.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.10 REMARK 200 R MERGE (I) : 0.25100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 5.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.70 REMARK 200 R MERGE FOR SHELL (I) : 5.74000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM HEPES, PEG12000, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.39067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.78133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.58600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.97667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 11.19533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER C 1 REMARK 465 GLU C 128 REMARK 465 ALA C 129 REMARK 465 GLU C 130 REMARK 465 THR C 131 REMARK 465 GLU C 132 REMARK 465 ASN C 133 REMARK 465 ALA C 134 REMARK 465 LYS C 135 REMARK 465 GLU C 136 REMARK 465 GLY C 137 REMARK 465 ALA C 138 REMARK 465 GLU C 264 REMARK 465 LYS C 265 REMARK 465 ALA C 266 REMARK 465 GLN C 267 REMARK 465 LYS C 268 REMARK 465 VAL C 269 REMARK 465 ASN C 270 REMARK 465 GLU C 271 REMARK 465 ASN C 272 REMARK 465 SER C 273 REMARK 465 VAL C 274 REMARK 465 PHE C 275 REMARK 465 ALA C 276 REMARK 465 VAL C 277 REMARK 465 LYS A 1 REMARK 465 LEU A 2 REMARK 465 ASN A 3 REMARK 465 GLY A 4 REMARK 465 THR A 5 REMARK 465 THR A 6 REMARK 465 ILE A 7 REMARK 465 ALA A 8 REMARK 465 ASP A 9 REMARK 465 THR A 10 REMARK 465 GLY A 11 REMARK 465 ILE A 12 REMARK 465 GLN A 13 REMARK 465 GLN A 14 REMARK 465 GLY A 15 REMARK 465 VAL A 16 REMARK 465 SER A 17 REMARK 465 VAL A 18 REMARK 465 PRO A 19 REMARK 465 ALA A 20 REMARK 465 ASP A 21 REMARK 465 LEU A 22 REMARK 465 LEU A 23 REMARK 465 SER A 24 REMARK 465 LYS A 25 REMARK 465 ILE A 26 REMARK 465 GLY A 27 REMARK 465 ASP A 28 REMARK 465 THR A 29 REMARK 465 ILE A 30 REMARK 465 HIS A 31 REMARK 465 LEU A 32 REMARK 465 THR A 33 REMARK 465 TYR A 34 REMARK 465 ASN A 35 REMARK 465 TYR A 36 REMARK 465 GLN A 37 REMARK 465 LEU A 38 REMARK 465 ASN A 39 REMARK 465 THR A 40 REMARK 465 VAL A 41 REMARK 465 ASP A 42 REMARK 465 THR A 43 REMARK 465 SER A 44 REMARK 465 VAL A 45 REMARK 465 GLN A 46 REMARK 465 SER A 47 REMARK 465 VAL A 48 REMARK 465 SER A 49 REMARK 465 ILE A 50 REMARK 465 LEU A 51 REMARK 465 THR A 52 REMARK 465 LYS A 53 REMARK 465 ALA A 54 REMARK 465 ALA A 55 REMARK 465 VAL A 56 REMARK 465 LEU A 57 REMARK 465 SER A 58 REMARK 465 SER A 59 REMARK 465 ASN A 60 REMARK 465 ILE A 61 REMARK 465 THR A 62 REMARK 465 LEU A 63 REMARK 465 ALA A 64 REMARK 465 ASP A 65 REMARK 465 GLY A 66 REMARK 465 ALA A 67 REMARK 465 LYS A 68 REMARK 465 LEU A 69 REMARK 465 PRO A 70 REMARK 465 ASN A 71 REMARK 465 PRO A 72 REMARK 465 VAL A 73 REMARK 465 VAL A 74 REMARK 465 GLN A 75 REMARK 465 THR A 76 REMARK 465 SER A 77 REMARK 465 ALA A 78 REMARK 465 LYS A 79 REMARK 465 THR A 80 REMARK 465 ILE A 81 REMARK 465 LEU A 82 REMARK 465 VAL A 83 REMARK 465 PRO A 84 REMARK 465 LYS A 85 REMARK 465 GLN A 86 REMARK 465 GLU A 87 REMARK 465 LEU A 88 REMARK 465 THR A 89 REMARK 465 LEU A 90 REMARK 465 VAL A 91 REMARK 465 ASN A 92 REMARK 465 VAL A 93 REMARK 465 PRO A 94 REMARK 465 ASP A 95 REMARK 465 ASP A 96 REMARK 465 PHE A 97 REMARK 465 THR A 98 REMARK 465 PHE A 99 REMARK 465 GLY A 100 REMARK 465 ASN A 101 REMARK 465 ASP A 102 REMARK 465 LEU A 103 REMARK 465 PRO A 104 REMARK 465 LYS A 105 REMARK 465 PRO A 106 REMARK 465 LEU A 107 REMARK 465 LYS A 108 REMARK 465 THR A 109 REMARK 465 SER A 110 REMARK 465 TYR A 111 REMARK 465 TYR A 112 REMARK 465 GLU A 113 REMARK 465 ALA A 114 REMARK 465 LYS A 115 REMARK 465 GLY A 116 REMARK 465 ASP A 117 REMARK 465 PHE A 118 REMARK 465 SER A 119 REMARK 465 PHE A 120 REMARK 465 ASP A 121 REMARK 465 VAL A 122 REMARK 465 ARG A 123 REMARK 465 ASP A 124 REMARK 465 THR A 125 REMARK 465 ARG A 126 REMARK 465 LEU A 127 REMARK 465 PRO A 128 REMARK 465 SER A 129 REMARK 465 THR A 130 REMARK 465 SER A 131 REMARK 465 PRO A 132 REMARK 465 TRP A 133 REMARK 465 GLN A 134 REMARK 465 LEU A 135 REMARK 465 THR A 136 REMARK 465 GLY A 137 REMARK 465 THR A 138 REMARK 465 LEU A 139 REMARK 465 THR A 140 REMARK 465 SER A 141 REMARK 465 LEU A 142 REMARK 465 PHE A 143 REMARK 465 LYS A 144 REMARK 465 ASN A 145 REMARK 465 ASP A 146 REMARK 465 GLN A 147 REMARK 465 GLY A 148 REMARK 465 GLN A 149 REMARK 465 GLU A 150 REMARK 465 LEU A 151 REMARK 465 SER A 152 REMARK 465 GLY A 153 REMARK 465 THR A 154 REMARK 465 LYS A 155 REMARK 465 LEU A 156 REMARK 465 TYR A 157 REMARK 465 PHE A 158 REMARK 465 ASN A 159 REMARK 465 HIS A 160 REMARK 465 SER A 161 REMARK 465 GLY A 162 REMARK 465 SER A 163 REMARK 465 LYS A 164 REMARK 465 GLN A 165 REMARK 465 LEU A 166 REMARK 465 ILE A 167 REMARK 465 GLN A 168 REMARK 465 GLN A 169 REMARK 465 GLY A 170 REMARK 465 GLN A 171 REMARK 465 ASN A 172 REMARK 465 THR A 173 REMARK 465 LEU A 174 REMARK 465 ILE A 175 REMARK 465 TYR A 176 REMARK 465 GLU A 177 REMARK 465 SER A 178 REMARK 465 ASP A 179 REMARK 465 GLY A 180 REMARK 465 THR A 181 REMARK 465 ALA A 182 REMARK 465 LYS A 183 REMARK 465 GLY A 184 REMARK 465 GLU A 185 REMARK 465 VAL A 186 REMARK 465 LEU A 187 REMARK 465 VAL A 188 REMARK 465 ASP A 189 REMARK 465 PHE A 190 REMARK 465 PRO A 191 REMARK 465 ASP A 192 REMARK 465 THR A 193 REMARK 465 ASP A 194 REMARK 465 GLY A 195 REMARK 465 LEU A 196 REMARK 465 LEU A 197 REMARK 465 LEU A 198 REMARK 465 GLU A 199 REMARK 465 VAL A 200 REMARK 465 ASN A 201 REMARK 465 SER A 202 REMARK 465 SER A 203 REMARK 465 THR A 204 REMARK 465 ASN A 205 REMARK 465 ALA A 206 REMARK 465 GLN A 207 REMARK 465 PRO A 208 REMARK 465 GLY A 209 REMARK 465 ALA A 210 REMARK 465 THR A 211 REMARK 465 TYR A 212 REMARK 465 GLN A 213 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR C 58 H ALA C 218 1.26 REMARK 500 HD1 HIS C 122 HD22 ASN C 147 1.31 REMARK 500 HA3 GLY C 248 O HOH C 353 1.45 REMARK 500 O ALA C 2 HH TYR C 146 1.51 REMARK 500 H SER C 192 O HOH C 304 1.55 REMARK 500 O ALA C 2 OH TYR C 146 2.01 REMARK 500 O VAL C 27 O HOH C 301 2.09 REMARK 500 O HOH C 355 O HOH C 376 2.16 REMARK 500 O HOH C 366 O HOH C 392 2.18 REMARK 500 OE1 GLU C 127 NH1 ARG C 143 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU C 30 CD GLU C 30 OE1 -0.113 REMARK 500 GLU C 30 CD GLU C 30 OE2 -0.068 REMARK 500 GLU C 105 CD GLU C 105 OE1 0.076 REMARK 500 GLU A 219 CD GLU A 219 OE2 0.100 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE C 5 CB - CA - C ANGL. DEV. = 13.5 DEGREES REMARK 500 THR C 63 CA - CB - OG1 ANGL. DEV. = -15.0 DEGREES REMARK 500 ARG C 189 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG C 189 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 LYS C 233 CB - CA - C ANGL. DEV. = -12.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU C 30 -0.85 75.36 REMARK 500 SER C 167 164.29 178.94 REMARK 500 ASN C 174 -78.16 59.22 REMARK 500 SER C 247 -70.87 -114.30 REMARK 500 SER C 250 -61.66 -109.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY C 248 ASP C 249 147.95 REMARK 500 GLY A 214 MET A 215 147.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG C 116 0.10 SIDE CHAIN REMARK 500 ARG C 143 0.08 SIDE CHAIN REMARK 500 ARG C 240 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF1 9I25 C 1 277 UNP A0A6N3AEW7_ENTFC DBREF2 9I25 C A0A6N3AEW7 30 306 DBREF 9I25 A 1 226 UNP Q3Y1R0 Q3Y1R0_ENTFD 601 826 SEQADV 9I25 LYS C 135 UNP A0A6N3AEW THR 164 CONFLICT SEQRES 1 C 277 SER ALA GLY ASP PHE GLY ILE LYS PRO VAL PHE PRO GLU SEQRES 2 C 277 ASN GLN ILE ASP LYS ALA ILE GLY TYR PHE ASP LEU LEU SEQRES 3 C 277 VAL ALA PRO GLU GLN ASN GLN THR LEU GLU VAL ILE ILE SEQRES 4 C 277 SER ASN SER SER ASP GLU GLU ARG THR PHE GLU VAL SER SEQRES 5 C 277 VAL ASN PRO ALA VAL THR SER ASP GLY GLY THR ILE ASP SEQRES 6 C 277 TYR SER GLN LYS ASN PRO THR LEU ASP GLU THR LEU PRO SEQRES 7 C 277 PHE ASP VAL ARG ASP VAL LEU LEU ILE ALA LYS LYS GLU SEQRES 8 C 277 ILE ASN VAL SER ALA HIS ALA GLU THR THR VAL PRO ILE SEQRES 9 C 277 GLU VAL LYS ILE PRO ALA LYS SER PHE LYS GLY ARG VAL SEQRES 10 C 277 LEU ALA GLY ILE HIS VAL SER PRO LYS GLU GLU ALA GLU SEQRES 11 C 277 THR GLU ASN ALA LYS GLU GLY ALA GLN ILE LYS ASN ARG SEQRES 12 C 277 ILE ALA TYR ASN LEU ALA VAL VAL LEU GLN GLU SER GLN SEQRES 13 C 277 GLU THR ILE GLU PRO ASP LEU LYS LEU LEU SER GLY ASP SEQRES 14 C 277 LEU ASP GLU VAL ASN ALA LYS PRO THR VAL GLN LEU ARG SEQRES 15 C 277 PHE GLN ASN PRO GLN PRO ARG ILE ILE SER ASN LEU ILE SEQRES 16 C 277 PHE THR SER LYS ILE PHE TYR GLU ASN GLN LEU TYR ILE SEQRES 17 C 277 GLU ASN THR SER ASN ALA PHE LEU VAL ALA PRO ASN SER SEQRES 18 C 277 ASN PHE HIS LEU ASN LEU ASP LEU ALA GLY ASP LYS ALA SEQRES 19 C 277 LYS ALA GLY ASP TYR ARG ALA GLU ILE ILE ALA LYS SER SEQRES 20 C 277 GLY ASP SER ASN GLU TRP ARG PHE THR GLN ASN PHE THR SEQRES 21 C 277 ILE LYS LYS GLU LYS ALA GLN LYS VAL ASN GLU ASN SER SEQRES 22 C 277 VAL PHE ALA VAL SEQRES 1 A 226 LYS LEU ASN GLY THR THR ILE ALA ASP THR GLY ILE GLN SEQRES 2 A 226 GLN GLY VAL SER VAL PRO ALA ASP LEU LEU SER LYS ILE SEQRES 3 A 226 GLY ASP THR ILE HIS LEU THR TYR ASN TYR GLN LEU ASN SEQRES 4 A 226 THR VAL ASP THR SER VAL GLN SER VAL SER ILE LEU THR SEQRES 5 A 226 LYS ALA ALA VAL LEU SER SER ASN ILE THR LEU ALA ASP SEQRES 6 A 226 GLY ALA LYS LEU PRO ASN PRO VAL VAL GLN THR SER ALA SEQRES 7 A 226 LYS THR ILE LEU VAL PRO LYS GLN GLU LEU THR LEU VAL SEQRES 8 A 226 ASN VAL PRO ASP ASP PHE THR PHE GLY ASN ASP LEU PRO SEQRES 9 A 226 LYS PRO LEU LYS THR SER TYR TYR GLU ALA LYS GLY ASP SEQRES 10 A 226 PHE SER PHE ASP VAL ARG ASP THR ARG LEU PRO SER THR SEQRES 11 A 226 SER PRO TRP GLN LEU THR GLY THR LEU THR SER LEU PHE SEQRES 12 A 226 LYS ASN ASP GLN GLY GLN GLU LEU SER GLY THR LYS LEU SEQRES 13 A 226 TYR PHE ASN HIS SER GLY SER LYS GLN LEU ILE GLN GLN SEQRES 14 A 226 GLY GLN ASN THR LEU ILE TYR GLU SER ASP GLY THR ALA SEQRES 15 A 226 LYS GLY GLU VAL LEU VAL ASP PHE PRO ASP THR ASP GLY SEQRES 16 A 226 LEU LEU LEU GLU VAL ASN SER SER THR ASN ALA GLN PRO SEQRES 17 A 226 GLY ALA THR TYR GLN GLY MET VAL THR TRP GLU LEU THR SEQRES 18 A 226 ALA GLY PRO THR SER FORMUL 3 HOH *106(H2 O) HELIX 1 AA1 ASP C 80 ASP C 83 5 4 SHEET 1 AA1 4 PHE C 5 VAL C 10 0 SHEET 2 AA1 4 ASN C 32 ASN C 41 -1 O ILE C 38 N LYS C 8 SHEET 3 AA1 4 ALA C 98 LYS C 107 -1 O VAL C 106 N GLN C 33 SHEET 4 AA1 4 LEU C 85 LEU C 86 -1 N LEU C 86 O GLU C 105 SHEET 1 AA2 5 PHE C 23 LEU C 26 0 SHEET 2 AA2 5 ASN C 142 GLN C 153 1 O VAL C 151 N LEU C 25 SHEET 3 AA2 5 VAL C 117 PRO C 125 -1 N ILE C 121 O LEU C 148 SHEET 4 AA2 5 ARG C 47 PRO C 55 -1 N ASN C 54 O GLY C 120 SHEET 5 AA2 5 GLU C 91 VAL C 94 -1 O ILE C 92 N PHE C 49 SHEET 1 AA3 3 PHE C 23 LEU C 26 0 SHEET 2 AA3 3 ASN C 142 GLN C 153 1 O VAL C 151 N LEU C 25 SHEET 3 AA3 3 VAL A 216 ALA A 222 1 O TRP A 218 N ARG C 143 SHEET 1 AA4 2 VAL C 57 THR C 58 0 SHEET 2 AA4 2 ILE C 64 ASP C 65 -1 O ASP C 65 N VAL C 57 SHEET 1 AA5 3 LYS C 164 VAL C 173 0 SHEET 2 AA5 3 LYS C 176 ASN C 185 -1 O GLN C 180 N ASP C 169 SHEET 3 AA5 3 SER C 221 ASP C 228 -1 O SER C 221 N ASN C 185 SHEET 1 AA6 3 GLN C 205 THR C 211 0 SHEET 2 AA6 3 ILE C 191 TYR C 202 -1 N SER C 198 O ASN C 210 SHEET 3 AA6 3 PHE C 215 VAL C 217 -1 O VAL C 217 N ILE C 191 SHEET 1 AA7 4 GLN C 205 THR C 211 0 SHEET 2 AA7 4 ILE C 191 TYR C 202 -1 N SER C 198 O ASN C 210 SHEET 3 AA7 4 GLY C 237 LYS C 246 -1 O ARG C 240 N PHE C 201 SHEET 4 AA7 4 GLU C 252 ILE C 261 -1 O PHE C 259 N TYR C 239 CRYST1 105.147 105.147 67.172 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009510 0.005491 0.000000 0.00000 SCALE2 0.000000 0.010982 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014887 0.00000 MASTER 645 0 0 1 24 0 0 6 2174 2 0 40 END