data_9IAH # _entry.id 9IAH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9IAH pdb_00009iah 10.2210/pdb9iah/pdb WWPDB D_1292145160 ? ? EMDB EMD-52781 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-03-05 ? 2 'EM metadata' 1 0 2025-03-05 ? 3 FSC 1 0 2025-03-05 ? 4 'Half map' 1 0 2025-03-05 1 5 'Half map' 1 0 2025-03-05 2 6 Image 1 0 2025-03-05 ? 7 Mask 1 0 2025-03-05 1 8 'Primary map' 1 0 2025-03-05 ? 9 'Structure model' 1 1 2025-11-05 ? 10 'Structure model' 1 2 2025-11-26 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 9 'Structure model' 'Data collection' 2 9 'Structure model' 'Database references' 3 10 'Structure model' 'Data collection' 4 10 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 9 'Structure model' citation 2 9 'Structure model' citation_author 3 9 'Structure model' em_admin 4 10 'Structure model' citation 5 10 'Structure model' citation_author 6 10 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 9 'Structure model' '_citation.country' 2 9 'Structure model' '_citation.journal_abbrev' 3 9 'Structure model' '_citation.journal_id_CSD' 4 9 'Structure model' '_citation.journal_id_ISSN' 5 9 'Structure model' '_citation.pdbx_database_id_DOI' 6 9 'Structure model' '_citation.pdbx_database_id_PubMed' 7 9 'Structure model' '_citation.title' 8 9 'Structure model' '_citation.year' 9 9 'Structure model' '_em_admin.last_update' 10 10 'Structure model' '_citation.journal_volume' 11 10 'Structure model' '_citation.page_first' 12 10 'Structure model' '_citation.page_last' 13 10 'Structure model' '_citation_author.identifier_ORCID' 14 10 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9IAH _pdbx_database_status.recvd_initial_deposition_date 2025-02-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Structure of beta-lactoglobulin fibril' _pdbx_database_related.db_id EMD-52781 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email jinghui.luo@psi.ch _pdbx_contact_author.name_first Jinghui _pdbx_contact_author.name_last Luo _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7014-8153 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sternke-Hoffmann, R.' 1 ? 'Rhyner, D.' 2 ? 'Qureshi, B.' 3 ? 'Riek, R.' 4 ? 'Greenwald, J.' 5 ? 'Luo, J.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nano Lett.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1530-6992 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 25 _citation.language ? _citation.page_first 16146 _citation.page_last 16153 _citation.title 'Structural Insights and Functional Dynamics of beta-Lactoglobulin Fibrils.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.nanolett.5c04125 _citation.pdbx_database_id_PubMed 41129746 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sternke-Hoffmann, R.' 1 ? primary 'Rhyner, D.' 2 ? primary 'Terashi, G.' 3 ? primary 'Qureshi, B.M.' 4 ? primary 'Riek, R.' 5 ? primary 'Greenwald, J.' 6 ? primary 'Kihara, D.' 7 ? primary 'Lutz-Bueno, V.' 8 ? primary 'Luo, J.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description Beta-lactoglobulin _entity.formula_weight 3627.232 _entity.pdbx_number_of_molecules 5 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name Beta-LG # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDA _entity_poly.pdbx_seq_one_letter_code_can LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDA _entity_poly.pdbx_strand_id E,D,C,B,A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 ILE n 1 3 VAL n 1 4 THR n 1 5 GLN n 1 6 THR n 1 7 MET n 1 8 LYS n 1 9 GLY n 1 10 LEU n 1 11 ASP n 1 12 ILE n 1 13 GLN n 1 14 LYS n 1 15 VAL n 1 16 ALA n 1 17 GLY n 1 18 THR n 1 19 TRP n 1 20 TYR n 1 21 SER n 1 22 LEU n 1 23 ALA n 1 24 MET n 1 25 ALA n 1 26 ALA n 1 27 SER n 1 28 ASP n 1 29 ILE n 1 30 SER n 1 31 LEU n 1 32 LEU n 1 33 ASP n 1 34 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 34 _entity_src_nat.common_name 'domestic cattle' _entity_src_nat.pdbx_organism_scientific 'Bos taurus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9913 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 1 LEU LEU E . n A 1 2 ILE 2 2 2 ILE ILE E . n A 1 3 VAL 3 3 3 VAL VAL E . n A 1 4 THR 4 4 4 THR THR E . n A 1 5 GLN 5 5 5 GLN GLN E . n A 1 6 THR 6 6 6 THR THR E . n A 1 7 MET 7 7 7 MET MET E . n A 1 8 LYS 8 8 8 LYS LYS E . n A 1 9 GLY 9 9 9 GLY GLY E . n A 1 10 LEU 10 10 10 LEU LEU E . n A 1 11 ASP 11 11 11 ASP ASP E . n A 1 12 ILE 12 12 12 ILE ILE E . n A 1 13 GLN 13 13 13 GLN GLN E . n A 1 14 LYS 14 14 14 LYS LYS E . n A 1 15 VAL 15 15 15 VAL VAL E . n A 1 16 ALA 16 16 16 ALA ALA E . n A 1 17 GLY 17 17 17 GLY GLY E . n A 1 18 THR 18 18 18 THR THR E . n A 1 19 TRP 19 19 19 TRP TRP E . n A 1 20 TYR 20 20 20 TYR TYR E . n A 1 21 SER 21 21 21 SER SER E . n A 1 22 LEU 22 22 22 LEU LEU E . n A 1 23 ALA 23 23 23 ALA ALA E . n A 1 24 MET 24 24 24 MET MET E . n A 1 25 ALA 25 25 25 ALA ALA E . n A 1 26 ALA 26 26 26 ALA ALA E . n A 1 27 SER 27 27 27 SER SER E . n A 1 28 ASP 28 28 28 ASP ASP E . n A 1 29 ILE 29 29 29 ILE ILE E . n A 1 30 SER 30 30 30 SER SER E . n A 1 31 LEU 31 31 31 LEU LEU E . n A 1 32 LEU 32 32 32 LEU LEU E . n A 1 33 ASP 33 33 33 ASP ASP E . n A 1 34 ALA 34 34 34 ALA ALA E . n B 1 1 LEU 1 1 1 LEU LEU D . n B 1 2 ILE 2 2 2 ILE ILE D . n B 1 3 VAL 3 3 3 VAL VAL D . n B 1 4 THR 4 4 4 THR THR D . n B 1 5 GLN 5 5 5 GLN GLN D . n B 1 6 THR 6 6 6 THR THR D . n B 1 7 MET 7 7 7 MET MET D . n B 1 8 LYS 8 8 8 LYS LYS D . n B 1 9 GLY 9 9 9 GLY GLY D . n B 1 10 LEU 10 10 10 LEU LEU D . n B 1 11 ASP 11 11 11 ASP ASP D . n B 1 12 ILE 12 12 12 ILE ILE D . n B 1 13 GLN 13 13 13 GLN GLN D . n B 1 14 LYS 14 14 14 LYS LYS D . n B 1 15 VAL 15 15 15 VAL VAL D . n B 1 16 ALA 16 16 16 ALA ALA D . n B 1 17 GLY 17 17 17 GLY GLY D . n B 1 18 THR 18 18 18 THR THR D . n B 1 19 TRP 19 19 19 TRP TRP D . n B 1 20 TYR 20 20 20 TYR TYR D . n B 1 21 SER 21 21 21 SER SER D . n B 1 22 LEU 22 22 22 LEU LEU D . n B 1 23 ALA 23 23 23 ALA ALA D . n B 1 24 MET 24 24 24 MET MET D . n B 1 25 ALA 25 25 25 ALA ALA D . n B 1 26 ALA 26 26 26 ALA ALA D . n B 1 27 SER 27 27 27 SER SER D . n B 1 28 ASP 28 28 28 ASP ASP D . n B 1 29 ILE 29 29 29 ILE ILE D . n B 1 30 SER 30 30 30 SER SER D . n B 1 31 LEU 31 31 31 LEU LEU D . n B 1 32 LEU 32 32 32 LEU LEU D . n B 1 33 ASP 33 33 33 ASP ASP D . n B 1 34 ALA 34 34 34 ALA ALA D . n C 1 1 LEU 1 1 1 LEU LEU C . n C 1 2 ILE 2 2 2 ILE ILE C . n C 1 3 VAL 3 3 3 VAL VAL C . n C 1 4 THR 4 4 4 THR THR C . n C 1 5 GLN 5 5 5 GLN GLN C . n C 1 6 THR 6 6 6 THR THR C . n C 1 7 MET 7 7 7 MET MET C . n C 1 8 LYS 8 8 8 LYS LYS C . n C 1 9 GLY 9 9 9 GLY GLY C . n C 1 10 LEU 10 10 10 LEU LEU C . n C 1 11 ASP 11 11 11 ASP ASP C . n C 1 12 ILE 12 12 12 ILE ILE C . n C 1 13 GLN 13 13 13 GLN GLN C . n C 1 14 LYS 14 14 14 LYS LYS C . n C 1 15 VAL 15 15 15 VAL VAL C . n C 1 16 ALA 16 16 16 ALA ALA C . n C 1 17 GLY 17 17 17 GLY GLY C . n C 1 18 THR 18 18 18 THR THR C . n C 1 19 TRP 19 19 19 TRP TRP C . n C 1 20 TYR 20 20 20 TYR TYR C . n C 1 21 SER 21 21 21 SER SER C . n C 1 22 LEU 22 22 22 LEU LEU C . n C 1 23 ALA 23 23 23 ALA ALA C . n C 1 24 MET 24 24 24 MET MET C . n C 1 25 ALA 25 25 25 ALA ALA C . n C 1 26 ALA 26 26 26 ALA ALA C . n C 1 27 SER 27 27 27 SER SER C . n C 1 28 ASP 28 28 28 ASP ASP C . n C 1 29 ILE 29 29 29 ILE ILE C . n C 1 30 SER 30 30 30 SER SER C . n C 1 31 LEU 31 31 31 LEU LEU C . n C 1 32 LEU 32 32 32 LEU LEU C . n C 1 33 ASP 33 33 33 ASP ASP C . n C 1 34 ALA 34 34 34 ALA ALA C . n D 1 1 LEU 1 1 1 LEU LEU B . n D 1 2 ILE 2 2 2 ILE ILE B . n D 1 3 VAL 3 3 3 VAL VAL B . n D 1 4 THR 4 4 4 THR THR B . n D 1 5 GLN 5 5 5 GLN GLN B . n D 1 6 THR 6 6 6 THR THR B . n D 1 7 MET 7 7 7 MET MET B . n D 1 8 LYS 8 8 8 LYS LYS B . n D 1 9 GLY 9 9 9 GLY GLY B . n D 1 10 LEU 10 10 10 LEU LEU B . n D 1 11 ASP 11 11 11 ASP ASP B . n D 1 12 ILE 12 12 12 ILE ILE B . n D 1 13 GLN 13 13 13 GLN GLN B . n D 1 14 LYS 14 14 14 LYS LYS B . n D 1 15 VAL 15 15 15 VAL VAL B . n D 1 16 ALA 16 16 16 ALA ALA B . n D 1 17 GLY 17 17 17 GLY GLY B . n D 1 18 THR 18 18 18 THR THR B . n D 1 19 TRP 19 19 19 TRP TRP B . n D 1 20 TYR 20 20 20 TYR TYR B . n D 1 21 SER 21 21 21 SER SER B . n D 1 22 LEU 22 22 22 LEU LEU B . n D 1 23 ALA 23 23 23 ALA ALA B . n D 1 24 MET 24 24 24 MET MET B . n D 1 25 ALA 25 25 25 ALA ALA B . n D 1 26 ALA 26 26 26 ALA ALA B . n D 1 27 SER 27 27 27 SER SER B . n D 1 28 ASP 28 28 28 ASP ASP B . n D 1 29 ILE 29 29 29 ILE ILE B . n D 1 30 SER 30 30 30 SER SER B . n D 1 31 LEU 31 31 31 LEU LEU B . n D 1 32 LEU 32 32 32 LEU LEU B . n D 1 33 ASP 33 33 33 ASP ASP B . n D 1 34 ALA 34 34 34 ALA ALA B . n E 1 1 LEU 1 1 1 LEU LEU A . n E 1 2 ILE 2 2 2 ILE ILE A . n E 1 3 VAL 3 3 3 VAL VAL A . n E 1 4 THR 4 4 4 THR THR A . n E 1 5 GLN 5 5 5 GLN GLN A . n E 1 6 THR 6 6 6 THR THR A . n E 1 7 MET 7 7 7 MET MET A . n E 1 8 LYS 8 8 8 LYS LYS A . n E 1 9 GLY 9 9 9 GLY GLY A . n E 1 10 LEU 10 10 10 LEU LEU A . n E 1 11 ASP 11 11 11 ASP ASP A . n E 1 12 ILE 12 12 12 ILE ILE A . n E 1 13 GLN 13 13 13 GLN GLN A . n E 1 14 LYS 14 14 14 LYS LYS A . n E 1 15 VAL 15 15 15 VAL VAL A . n E 1 16 ALA 16 16 16 ALA ALA A . n E 1 17 GLY 17 17 17 GLY GLY A . n E 1 18 THR 18 18 18 THR THR A . n E 1 19 TRP 19 19 19 TRP TRP A . n E 1 20 TYR 20 20 20 TYR TYR A . n E 1 21 SER 21 21 21 SER SER A . n E 1 22 LEU 22 22 22 LEU LEU A . n E 1 23 ALA 23 23 23 ALA ALA A . n E 1 24 MET 24 24 24 MET MET A . n E 1 25 ALA 25 25 25 ALA ALA A . n E 1 26 ALA 26 26 26 ALA ALA A . n E 1 27 SER 27 27 27 SER SER A . n E 1 28 ASP 28 28 28 ASP ASP A . n E 1 29 ILE 29 29 29 ILE ILE A . n E 1 30 SER 30 30 30 SER SER A . n E 1 31 LEU 31 31 31 LEU LEU A . n E 1 32 LEU 32 32 32 LEU LEU A . n E 1 33 ASP 33 33 33 ASP ASP A . n E 1 34 ALA 34 34 34 ALA ALA A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9IAH _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9IAH _struct.title 'Structure of beta-lactoglobulin fibril' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9IAH _struct_keywords.text 'Whey protein, Nutrient transport, Amyloid fibrillation, Cross-beta structure, Nanomaterial, BIOSYNTHETIC PROTEIN' _struct_keywords.pdbx_keywords 'BIOSYNTHETIC PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LACB_BOVIN _struct_ref.pdbx_db_accession P02754 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDA _struct_ref.pdbx_align_begin 17 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9IAH E 1 ? 34 ? P02754 17 ? 50 ? 1 34 2 1 9IAH D 1 ? 34 ? P02754 17 ? 50 ? 1 34 3 1 9IAH C 1 ? 34 ? P02754 17 ? 50 ? 1 34 4 1 9IAH B 1 ? 34 ? P02754 17 ? 50 ? 1 34 5 1 9IAH A 1 ? 34 ? P02754 17 ? 50 ? 1 34 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 5 ? AA4 ? 5 ? AA5 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel AA5 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 2 ? LYS A 8 ? ILE E 2 LYS E 8 AA1 2 ILE B 2 ? LYS B 8 ? ILE D 2 LYS D 8 AA1 3 ILE C 2 ? LYS C 8 ? ILE C 2 LYS C 8 AA1 4 ILE D 2 ? LYS D 8 ? ILE B 2 LYS B 8 AA1 5 ILE E 2 ? LYS E 8 ? ILE A 2 LYS A 8 AA2 1 ASP A 11 ? GLN A 13 ? ASP E 11 GLN E 13 AA2 2 ASP B 11 ? GLN B 13 ? ASP D 11 GLN D 13 AA2 3 ASP C 11 ? GLN C 13 ? ASP C 11 GLN C 13 AA2 4 ASP D 11 ? GLN D 13 ? ASP B 11 GLN B 13 AA2 5 ASP E 11 ? GLN E 13 ? ASP A 11 GLN A 13 AA3 1 THR A 18 ? TRP A 19 ? THR E 18 TRP E 19 AA3 2 THR B 18 ? TRP B 19 ? THR D 18 TRP D 19 AA3 3 THR C 18 ? TRP C 19 ? THR C 18 TRP C 19 AA3 4 THR D 18 ? TRP D 19 ? THR B 18 TRP B 19 AA3 5 THR E 18 ? TRP E 19 ? THR A 18 TRP A 19 AA4 1 ALA A 23 ? ALA A 25 ? ALA E 23 ALA E 25 AA4 2 ALA B 23 ? ALA B 25 ? ALA D 23 ALA D 25 AA4 3 ALA C 23 ? ALA C 25 ? ALA C 23 ALA C 25 AA4 4 ALA D 23 ? ALA D 25 ? ALA B 23 ALA B 25 AA4 5 ALA E 23 ? ALA E 25 ? ALA A 23 ALA A 25 AA5 1 ASP A 28 ? ASP A 33 ? ASP E 28 ASP E 33 AA5 2 ASP B 28 ? ASP B 33 ? ASP D 28 ASP D 33 AA5 3 ASP C 28 ? ASP C 33 ? ASP C 28 ASP C 33 AA5 4 ASP D 28 ? ASP D 33 ? ASP B 28 ASP B 33 AA5 5 ASP E 28 ? ASP E 33 ? ASP A 28 ASP A 33 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 4 ? N THR E 4 O GLN B 5 ? O GLN D 5 AA1 2 3 N THR B 4 ? N THR D 4 O GLN C 5 ? O GLN C 5 AA1 3 4 N ILE C 2 ? N ILE C 2 O VAL D 3 ? O VAL B 3 AA1 4 5 N THR D 4 ? N THR B 4 O GLN E 5 ? O GLN A 5 AA2 1 2 N ASP A 11 ? N ASP E 11 O ILE B 12 ? O ILE D 12 AA2 2 3 N ASP B 11 ? N ASP D 11 O ILE C 12 ? O ILE C 12 AA2 3 4 N ASP C 11 ? N ASP C 11 O ILE D 12 ? O ILE B 12 AA2 4 5 N ASP D 11 ? N ASP B 11 O ILE E 12 ? O ILE A 12 AA3 1 2 N THR A 18 ? N THR E 18 O TRP B 19 ? O TRP D 19 AA3 2 3 N THR B 18 ? N THR D 18 O TRP C 19 ? O TRP C 19 AA3 3 4 N THR C 18 ? N THR C 18 O TRP D 19 ? O TRP B 19 AA3 4 5 N THR D 18 ? N THR B 18 O TRP E 19 ? O TRP A 19 AA4 1 2 N MET A 24 ? N MET E 24 O ALA B 23 ? O ALA D 23 AA4 2 3 N MET B 24 ? N MET D 24 O ALA C 23 ? O ALA C 23 AA4 3 4 N MET C 24 ? N MET C 24 O ALA D 23 ? O ALA B 23 AA4 4 5 N MET D 24 ? N MET B 24 O ALA E 23 ? O ALA A 23 AA5 1 2 N LEU A 31 ? N LEU E 31 O LEU B 32 ? O LEU D 32 AA5 2 3 N LEU B 31 ? N LEU D 31 O LEU C 32 ? O LEU C 32 AA5 3 4 N LEU C 31 ? N LEU C 31 O LEU D 32 ? O LEU B 32 AA5 4 5 N LEU D 31 ? N LEU B 31 O LEU E 32 ? O LEU A 32 # _pdbx_entry_details.entry_id 9IAH _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9IAH _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9IAH _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.17 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 67843 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 2.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Beta-lactoglobulin fibril' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_image_scans.entry_id 9IAH _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 4092 _em_image_scans.dimension_width 5760 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 9IAH _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min 500 _em_imaging.calibrated_defocus_max 2500 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 130000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum 88.15 _em_imaging.recording_temperature_maximum 93.15 _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 100 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details 'PELCO easiGLOW Glow discharge cleaning system using 25 mA for 30 s.' _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9IAH _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE-PROPANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 295.15 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details '3.7 ul sample was applied and blotted for 6 s after a wait time of 30 s with a force of 0' # _em_experiment.entry_id 9IAH _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASP N N N N 14 ASP CA C N S 15 ASP C C N N 16 ASP O O N N 17 ASP CB C N N 18 ASP CG C N N 19 ASP OD1 O N N 20 ASP OD2 O N N 21 ASP OXT O N N 22 ASP H H N N 23 ASP H2 H N N 24 ASP HA H N N 25 ASP HB2 H N N 26 ASP HB3 H N N 27 ASP HD2 H N N 28 ASP HXT H N N 29 GLN N N N N 30 GLN CA C N S 31 GLN C C N N 32 GLN O O N N 33 GLN CB C N N 34 GLN CG C N N 35 GLN CD C N N 36 GLN OE1 O N N 37 GLN NE2 N N N 38 GLN OXT O N N 39 GLN H H N N 40 GLN H2 H N N 41 GLN HA H N N 42 GLN HB2 H N N 43 GLN HB3 H N N 44 GLN HG2 H N N 45 GLN HG3 H N N 46 GLN HE21 H N N 47 GLN HE22 H N N 48 GLN HXT H N N 49 GLY N N N N 50 GLY CA C N N 51 GLY C C N N 52 GLY O O N N 53 GLY OXT O N N 54 GLY H H N N 55 GLY H2 H N N 56 GLY HA2 H N N 57 GLY HA3 H N N 58 GLY HXT H N N 59 ILE N N N N 60 ILE CA C N S 61 ILE C C N N 62 ILE O O N N 63 ILE CB C N S 64 ILE CG1 C N N 65 ILE CG2 C N N 66 ILE CD1 C N N 67 ILE OXT O N N 68 ILE H H N N 69 ILE H2 H N N 70 ILE HA H N N 71 ILE HB H N N 72 ILE HG12 H N N 73 ILE HG13 H N N 74 ILE HG21 H N N 75 ILE HG22 H N N 76 ILE HG23 H N N 77 ILE HD11 H N N 78 ILE HD12 H N N 79 ILE HD13 H N N 80 ILE HXT H N N 81 LEU N N N N 82 LEU CA C N S 83 LEU C C N N 84 LEU O O N N 85 LEU CB C N N 86 LEU CG C N N 87 LEU CD1 C N N 88 LEU CD2 C N N 89 LEU OXT O N N 90 LEU H H N N 91 LEU H2 H N N 92 LEU HA H N N 93 LEU HB2 H N N 94 LEU HB3 H N N 95 LEU HG H N N 96 LEU HD11 H N N 97 LEU HD12 H N N 98 LEU HD13 H N N 99 LEU HD21 H N N 100 LEU HD22 H N N 101 LEU HD23 H N N 102 LEU HXT H N N 103 LYS N N N N 104 LYS CA C N S 105 LYS C C N N 106 LYS O O N N 107 LYS CB C N N 108 LYS CG C N N 109 LYS CD C N N 110 LYS CE C N N 111 LYS NZ N N N 112 LYS OXT O N N 113 LYS H H N N 114 LYS H2 H N N 115 LYS HA H N N 116 LYS HB2 H N N 117 LYS HB3 H N N 118 LYS HG2 H N N 119 LYS HG3 H N N 120 LYS HD2 H N N 121 LYS HD3 H N N 122 LYS HE2 H N N 123 LYS HE3 H N N 124 LYS HZ1 H N N 125 LYS HZ2 H N N 126 LYS HZ3 H N N 127 LYS HXT H N N 128 MET N N N N 129 MET CA C N S 130 MET C C N N 131 MET O O N N 132 MET CB C N N 133 MET CG C N N 134 MET SD S N N 135 MET CE C N N 136 MET OXT O N N 137 MET H H N N 138 MET H2 H N N 139 MET HA H N N 140 MET HB2 H N N 141 MET HB3 H N N 142 MET HG2 H N N 143 MET HG3 H N N 144 MET HE1 H N N 145 MET HE2 H N N 146 MET HE3 H N N 147 MET HXT H N N 148 SER N N N N 149 SER CA C N S 150 SER C C N N 151 SER O O N N 152 SER CB C N N 153 SER OG O N N 154 SER OXT O N N 155 SER H H N N 156 SER H2 H N N 157 SER HA H N N 158 SER HB2 H N N 159 SER HB3 H N N 160 SER HG H N N 161 SER HXT H N N 162 THR N N N N 163 THR CA C N S 164 THR C C N N 165 THR O O N N 166 THR CB C N R 167 THR OG1 O N N 168 THR CG2 C N N 169 THR OXT O N N 170 THR H H N N 171 THR H2 H N N 172 THR HA H N N 173 THR HB H N N 174 THR HG1 H N N 175 THR HG21 H N N 176 THR HG22 H N N 177 THR HG23 H N N 178 THR HXT H N N 179 TRP N N N N 180 TRP CA C N S 181 TRP C C N N 182 TRP O O N N 183 TRP CB C N N 184 TRP CG C Y N 185 TRP CD1 C Y N 186 TRP CD2 C Y N 187 TRP NE1 N Y N 188 TRP CE2 C Y N 189 TRP CE3 C Y N 190 TRP CZ2 C Y N 191 TRP CZ3 C Y N 192 TRP CH2 C Y N 193 TRP OXT O N N 194 TRP H H N N 195 TRP H2 H N N 196 TRP HA H N N 197 TRP HB2 H N N 198 TRP HB3 H N N 199 TRP HD1 H N N 200 TRP HE1 H N N 201 TRP HE3 H N N 202 TRP HZ2 H N N 203 TRP HZ3 H N N 204 TRP HH2 H N N 205 TRP HXT H N N 206 TYR N N N N 207 TYR CA C N S 208 TYR C C N N 209 TYR O O N N 210 TYR CB C N N 211 TYR CG C Y N 212 TYR CD1 C Y N 213 TYR CD2 C Y N 214 TYR CE1 C Y N 215 TYR CE2 C Y N 216 TYR CZ C Y N 217 TYR OH O N N 218 TYR OXT O N N 219 TYR H H N N 220 TYR H2 H N N 221 TYR HA H N N 222 TYR HB2 H N N 223 TYR HB3 H N N 224 TYR HD1 H N N 225 TYR HD2 H N N 226 TYR HE1 H N N 227 TYR HE2 H N N 228 TYR HH H N N 229 TYR HXT H N N 230 VAL N N N N 231 VAL CA C N S 232 VAL C C N N 233 VAL O O N N 234 VAL CB C N N 235 VAL CG1 C N N 236 VAL CG2 C N N 237 VAL OXT O N N 238 VAL H H N N 239 VAL H2 H N N 240 VAL HA H N N 241 VAL HB H N N 242 VAL HG11 H N N 243 VAL HG12 H N N 244 VAL HG13 H N N 245 VAL HG21 H N N 246 VAL HG22 H N N 247 VAL HG23 H N N 248 VAL HXT H N N 249 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASP N CA sing N N 13 ASP N H sing N N 14 ASP N H2 sing N N 15 ASP CA C sing N N 16 ASP CA CB sing N N 17 ASP CA HA sing N N 18 ASP C O doub N N 19 ASP C OXT sing N N 20 ASP CB CG sing N N 21 ASP CB HB2 sing N N 22 ASP CB HB3 sing N N 23 ASP CG OD1 doub N N 24 ASP CG OD2 sing N N 25 ASP OD2 HD2 sing N N 26 ASP OXT HXT sing N N 27 GLN N CA sing N N 28 GLN N H sing N N 29 GLN N H2 sing N N 30 GLN CA C sing N N 31 GLN CA CB sing N N 32 GLN CA HA sing N N 33 GLN C O doub N N 34 GLN C OXT sing N N 35 GLN CB CG sing N N 36 GLN CB HB2 sing N N 37 GLN CB HB3 sing N N 38 GLN CG CD sing N N 39 GLN CG HG2 sing N N 40 GLN CG HG3 sing N N 41 GLN CD OE1 doub N N 42 GLN CD NE2 sing N N 43 GLN NE2 HE21 sing N N 44 GLN NE2 HE22 sing N N 45 GLN OXT HXT sing N N 46 GLY N CA sing N N 47 GLY N H sing N N 48 GLY N H2 sing N N 49 GLY CA C sing N N 50 GLY CA HA2 sing N N 51 GLY CA HA3 sing N N 52 GLY C O doub N N 53 GLY C OXT sing N N 54 GLY OXT HXT sing N N 55 ILE N CA sing N N 56 ILE N H sing N N 57 ILE N H2 sing N N 58 ILE CA C sing N N 59 ILE CA CB sing N N 60 ILE CA HA sing N N 61 ILE C O doub N N 62 ILE C OXT sing N N 63 ILE CB CG1 sing N N 64 ILE CB CG2 sing N N 65 ILE CB HB sing N N 66 ILE CG1 CD1 sing N N 67 ILE CG1 HG12 sing N N 68 ILE CG1 HG13 sing N N 69 ILE CG2 HG21 sing N N 70 ILE CG2 HG22 sing N N 71 ILE CG2 HG23 sing N N 72 ILE CD1 HD11 sing N N 73 ILE CD1 HD12 sing N N 74 ILE CD1 HD13 sing N N 75 ILE OXT HXT sing N N 76 LEU N CA sing N N 77 LEU N H sing N N 78 LEU N H2 sing N N 79 LEU CA C sing N N 80 LEU CA CB sing N N 81 LEU CA HA sing N N 82 LEU C O doub N N 83 LEU C OXT sing N N 84 LEU CB CG sing N N 85 LEU CB HB2 sing N N 86 LEU CB HB3 sing N N 87 LEU CG CD1 sing N N 88 LEU CG CD2 sing N N 89 LEU CG HG sing N N 90 LEU CD1 HD11 sing N N 91 LEU CD1 HD12 sing N N 92 LEU CD1 HD13 sing N N 93 LEU CD2 HD21 sing N N 94 LEU CD2 HD22 sing N N 95 LEU CD2 HD23 sing N N 96 LEU OXT HXT sing N N 97 LYS N CA sing N N 98 LYS N H sing N N 99 LYS N H2 sing N N 100 LYS CA C sing N N 101 LYS CA CB sing N N 102 LYS CA HA sing N N 103 LYS C O doub N N 104 LYS C OXT sing N N 105 LYS CB CG sing N N 106 LYS CB HB2 sing N N 107 LYS CB HB3 sing N N 108 LYS CG CD sing N N 109 LYS CG HG2 sing N N 110 LYS CG HG3 sing N N 111 LYS CD CE sing N N 112 LYS CD HD2 sing N N 113 LYS CD HD3 sing N N 114 LYS CE NZ sing N N 115 LYS CE HE2 sing N N 116 LYS CE HE3 sing N N 117 LYS NZ HZ1 sing N N 118 LYS NZ HZ2 sing N N 119 LYS NZ HZ3 sing N N 120 LYS OXT HXT sing N N 121 MET N CA sing N N 122 MET N H sing N N 123 MET N H2 sing N N 124 MET CA C sing N N 125 MET CA CB sing N N 126 MET CA HA sing N N 127 MET C O doub N N 128 MET C OXT sing N N 129 MET CB CG sing N N 130 MET CB HB2 sing N N 131 MET CB HB3 sing N N 132 MET CG SD sing N N 133 MET CG HG2 sing N N 134 MET CG HG3 sing N N 135 MET SD CE sing N N 136 MET CE HE1 sing N N 137 MET CE HE2 sing N N 138 MET CE HE3 sing N N 139 MET OXT HXT sing N N 140 SER N CA sing N N 141 SER N H sing N N 142 SER N H2 sing N N 143 SER CA C sing N N 144 SER CA CB sing N N 145 SER CA HA sing N N 146 SER C O doub N N 147 SER C OXT sing N N 148 SER CB OG sing N N 149 SER CB HB2 sing N N 150 SER CB HB3 sing N N 151 SER OG HG sing N N 152 SER OXT HXT sing N N 153 THR N CA sing N N 154 THR N H sing N N 155 THR N H2 sing N N 156 THR CA C sing N N 157 THR CA CB sing N N 158 THR CA HA sing N N 159 THR C O doub N N 160 THR C OXT sing N N 161 THR CB OG1 sing N N 162 THR CB CG2 sing N N 163 THR CB HB sing N N 164 THR OG1 HG1 sing N N 165 THR CG2 HG21 sing N N 166 THR CG2 HG22 sing N N 167 THR CG2 HG23 sing N N 168 THR OXT HXT sing N N 169 TRP N CA sing N N 170 TRP N H sing N N 171 TRP N H2 sing N N 172 TRP CA C sing N N 173 TRP CA CB sing N N 174 TRP CA HA sing N N 175 TRP C O doub N N 176 TRP C OXT sing N N 177 TRP CB CG sing N N 178 TRP CB HB2 sing N N 179 TRP CB HB3 sing N N 180 TRP CG CD1 doub Y N 181 TRP CG CD2 sing Y N 182 TRP CD1 NE1 sing Y N 183 TRP CD1 HD1 sing N N 184 TRP CD2 CE2 doub Y N 185 TRP CD2 CE3 sing Y N 186 TRP NE1 CE2 sing Y N 187 TRP NE1 HE1 sing N N 188 TRP CE2 CZ2 sing Y N 189 TRP CE3 CZ3 doub Y N 190 TRP CE3 HE3 sing N N 191 TRP CZ2 CH2 doub Y N 192 TRP CZ2 HZ2 sing N N 193 TRP CZ3 CH2 sing Y N 194 TRP CZ3 HZ3 sing N N 195 TRP CH2 HH2 sing N N 196 TRP OXT HXT sing N N 197 TYR N CA sing N N 198 TYR N H sing N N 199 TYR N H2 sing N N 200 TYR CA C sing N N 201 TYR CA CB sing N N 202 TYR CA HA sing N N 203 TYR C O doub N N 204 TYR C OXT sing N N 205 TYR CB CG sing N N 206 TYR CB HB2 sing N N 207 TYR CB HB3 sing N N 208 TYR CG CD1 doub Y N 209 TYR CG CD2 sing Y N 210 TYR CD1 CE1 sing Y N 211 TYR CD1 HD1 sing N N 212 TYR CD2 CE2 doub Y N 213 TYR CD2 HD2 sing N N 214 TYR CE1 CZ doub Y N 215 TYR CE1 HE1 sing N N 216 TYR CE2 CZ sing Y N 217 TYR CE2 HE2 sing N N 218 TYR CZ OH sing N N 219 TYR OH HH sing N N 220 TYR OXT HXT sing N N 221 VAL N CA sing N N 222 VAL N H sing N N 223 VAL N H2 sing N N 224 VAL CA C sing N N 225 VAL CA CB sing N N 226 VAL CA HA sing N N 227 VAL C O doub N N 228 VAL C OXT sing N N 229 VAL CB CG1 sing N N 230 VAL CB CG2 sing N N 231 VAL CB HB sing N N 232 VAL CG1 HG11 sing N N 233 VAL CG1 HG12 sing N N 234 VAL CG1 HG13 sing N N 235 VAL CG2 HG21 sing N N 236 VAL CG2 HG22 sing N N 237 VAL CG2 HG23 sing N N 238 VAL OXT HXT sing N N 239 # _em_admin.current_status REL _em_admin.deposition_date 2025-02-10 _em_admin.deposition_site PDBE _em_admin.entry_id 9IAH _em_admin.last_update 2025-11-26 _em_admin.map_release_date 2025-03-05 _em_admin.title 'Structure of beta-lactoglobulin fibril' # _em_buffer_component.buffer_id 1 _em_buffer_component.concentration 25 _em_buffer_component.concentration_units mM _em_buffer_component.formula ? _em_buffer_component.id 1 _em_buffer_component.name 'Citric acid-sodium phosphate' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9913 _em_entity_assembly_naturalsource.organism 'Bos taurus' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # loop_ _em_helical_entity.id _em_helical_entity.image_processing_id _em_helical_entity.details _em_helical_entity.axial_symmetry _em_helical_entity.angular_rotation_per_subunit _em_helical_entity.axial_rise_per_subunit 1 1 ? C1 -2.73760 4.80371 2 1 ? C1 -2.73567 4.80359 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 1 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 57.5 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 2 _em_image_recording.num_real_images 16475 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details 'from 3825 micrographs selected based on rlnCtfMaxResolution with a cut-off of 4 A' _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 1387479 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU 3.2.0.4776 MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? RELION 5.0 # _em_specimen.concentration 7 _em_specimen.details 'This sample was monodisperse. The sample was prepared at 7 mg/ml and diluted 15 times for EM grid.' _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Swiss National Science Foundation' Switzerland 10002967 1 'Swiss National Science Foundation' Switzerland 197626 2 # _atom_sites.entry_id 9IAH _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #