data_9IFR # _entry.id 9IFR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9IFR pdb_00009ifr 10.2210/pdb9ifr/pdb WWPDB D_1292145566 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-11-26 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9IFR _pdbx_database_status.recvd_initial_deposition_date 2025-02-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email r.barringer@bristol.ac.uk _pdbx_contact_author.name_first Rob _pdbx_contact_author.name_last Barringer _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0948-3761 # _audit_author.name 'Barringer, R.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-0948-3761 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Protein Sci.' _citation.journal_id_ASTM PRCIEI _citation.journal_id_CSD 0795 _citation.journal_id_ISSN 1469-896X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 34 _citation.language ? _citation.page_first e70342 _citation.page_last e70342 _citation.title 'A global survey of intramolecular isopeptide bonds.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/pro.70342 _citation.pdbx_database_id_PubMed 41236442 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Costa, F.' 1 ? primary 'Riziotis, I.' 2 ? primary 'Andreeva, A.' 3 ? primary 'Kalwan, D.' 4 ? primary 'de Jong, J.' 5 ? primary 'Hinchliffe, P.' 6 ? primary 'Parmeggiani, F.' 7 ? primary 'Race, P.R.' 8 ? primary 'Burston, S.G.' 9 ? primary 'Bateman, A.' 10 ? primary 'Barringer, R.' 11 0000-0002-0948-3761 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'OmpA-like domain-containing protein' 12441.850 1 ? ? ? ? 2 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 3 water nat water 18.015 113 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPKPTVDVVKTTTATTAKVGDTIDYTVKVTVANSQTTDALTLNDTLGQGLSFVSGTAPTGWTLTGNGQAINIAAPKGQIP GTYNLTYKVLVGTDAVNNVVNKVTASGGDKPSCTTCTTTTPVT ; _entity_poly.pdbx_seq_one_letter_code_can ;GPKPTVDVVKTTTATTAKVGDTIDYTVKVTVANSQTTDALTLNDTLGQGLSFVSGTAPTGWTLTGNGQAINIAAPKGQIP GTYNLTYKVLVGTDAVNNVVNKVTASGGDKPSCTTCTTTTPVT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETATE ION' ACT 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LYS n 1 4 PRO n 1 5 THR n 1 6 VAL n 1 7 ASP n 1 8 VAL n 1 9 VAL n 1 10 LYS n 1 11 THR n 1 12 THR n 1 13 THR n 1 14 ALA n 1 15 THR n 1 16 THR n 1 17 ALA n 1 18 LYS n 1 19 VAL n 1 20 GLY n 1 21 ASP n 1 22 THR n 1 23 ILE n 1 24 ASP n 1 25 TYR n 1 26 THR n 1 27 VAL n 1 28 LYS n 1 29 VAL n 1 30 THR n 1 31 VAL n 1 32 ALA n 1 33 ASN n 1 34 SER n 1 35 GLN n 1 36 THR n 1 37 THR n 1 38 ASP n 1 39 ALA n 1 40 LEU n 1 41 THR n 1 42 LEU n 1 43 ASN n 1 44 ASP n 1 45 THR n 1 46 LEU n 1 47 GLY n 1 48 GLN n 1 49 GLY n 1 50 LEU n 1 51 SER n 1 52 PHE n 1 53 VAL n 1 54 SER n 1 55 GLY n 1 56 THR n 1 57 ALA n 1 58 PRO n 1 59 THR n 1 60 GLY n 1 61 TRP n 1 62 THR n 1 63 LEU n 1 64 THR n 1 65 GLY n 1 66 ASN n 1 67 GLY n 1 68 GLN n 1 69 ALA n 1 70 ILE n 1 71 ASN n 1 72 ILE n 1 73 ALA n 1 74 ALA n 1 75 PRO n 1 76 LYS n 1 77 GLY n 1 78 GLN n 1 79 ILE n 1 80 PRO n 1 81 GLY n 1 82 THR n 1 83 TYR n 1 84 ASN n 1 85 LEU n 1 86 THR n 1 87 TYR n 1 88 LYS n 1 89 VAL n 1 90 LEU n 1 91 VAL n 1 92 GLY n 1 93 THR n 1 94 ASP n 1 95 ALA n 1 96 VAL n 1 97 ASN n 1 98 ASN n 1 99 VAL n 1 100 VAL n 1 101 ASN n 1 102 LYS n 1 103 VAL n 1 104 THR n 1 105 ALA n 1 106 SER n 1 107 GLY n 1 108 GLY n 1 109 ASP n 1 110 LYS n 1 111 PRO n 1 112 SER n 1 113 CYS n 1 114 THR n 1 115 THR n 1 116 CYS n 1 117 THR n 1 118 THR n 1 119 THR n 1 120 THR n 1 121 PRO n 1 122 VAL n 1 123 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 123 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene B9T28_05395 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Acinetobacter silvestris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1977882 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 18 18 GLY GLY A . n A 1 2 PRO 2 19 19 PRO PRO A . n A 1 3 LYS 3 20 20 LYS LYS A . n A 1 4 PRO 4 21 21 PRO PRO A . n A 1 5 THR 5 22 22 THR THR A . n A 1 6 VAL 6 23 23 VAL VAL A . n A 1 7 ASP 7 24 24 ASP ASP A . n A 1 8 VAL 8 25 25 VAL VAL A . n A 1 9 VAL 9 26 26 VAL VAL A . n A 1 10 LYS 10 27 27 LYS LYS A . n A 1 11 THR 11 28 28 THR THR A . n A 1 12 THR 12 29 29 THR THR A . n A 1 13 THR 13 30 30 THR THR A . n A 1 14 ALA 14 31 31 ALA ALA A . n A 1 15 THR 15 32 32 THR THR A . n A 1 16 THR 16 33 33 THR THR A . n A 1 17 ALA 17 34 34 ALA ALA A . n A 1 18 LYS 18 35 35 LYS LYS A . n A 1 19 VAL 19 36 36 VAL VAL A . n A 1 20 GLY 20 37 37 GLY GLY A . n A 1 21 ASP 21 38 38 ASP ASP A . n A 1 22 THR 22 39 39 THR THR A . n A 1 23 ILE 23 40 40 ILE ILE A . n A 1 24 ASP 24 41 41 ASP ASP A . n A 1 25 TYR 25 42 42 TYR TYR A . n A 1 26 THR 26 43 43 THR THR A . n A 1 27 VAL 27 44 44 VAL VAL A . n A 1 28 LYS 28 45 45 LYS LYS A . n A 1 29 VAL 29 46 46 VAL VAL A . n A 1 30 THR 30 47 47 THR THR A . n A 1 31 VAL 31 48 48 VAL VAL A . n A 1 32 ALA 32 49 49 ALA ALA A . n A 1 33 ASN 33 50 50 ASN ASN A . n A 1 34 SER 34 51 51 SER SER A . n A 1 35 GLN 35 52 52 GLN GLN A . n A 1 36 THR 36 53 53 THR THR A . n A 1 37 THR 37 54 54 THR THR A . n A 1 38 ASP 38 55 55 ASP ASP A . n A 1 39 ALA 39 56 56 ALA ALA A . n A 1 40 LEU 40 57 57 LEU LEU A . n A 1 41 THR 41 58 58 THR THR A . n A 1 42 LEU 42 59 59 LEU LEU A . n A 1 43 ASN 43 60 60 ASN ASN A . n A 1 44 ASP 44 61 61 ASP ASP A . n A 1 45 THR 45 62 62 THR THR A . n A 1 46 LEU 46 63 63 LEU LEU A . n A 1 47 GLY 47 64 64 GLY GLY A . n A 1 48 GLN 48 65 65 GLN GLN A . n A 1 49 GLY 49 66 66 GLY GLY A . n A 1 50 LEU 50 67 67 LEU LEU A . n A 1 51 SER 51 68 68 SER SER A . n A 1 52 PHE 52 69 69 PHE PHE A . n A 1 53 VAL 53 70 70 VAL VAL A . n A 1 54 SER 54 71 71 SER SER A . n A 1 55 GLY 55 72 72 GLY GLY A . n A 1 56 THR 56 73 73 THR THR A . n A 1 57 ALA 57 74 74 ALA ALA A . n A 1 58 PRO 58 75 75 PRO PRO A . n A 1 59 THR 59 76 76 THR THR A . n A 1 60 GLY 60 77 77 GLY GLY A . n A 1 61 TRP 61 78 78 TRP TRP A . n A 1 62 THR 62 79 79 THR THR A . n A 1 63 LEU 63 80 80 LEU LEU A . n A 1 64 THR 64 81 81 THR THR A . n A 1 65 GLY 65 82 82 GLY GLY A . n A 1 66 ASN 66 83 83 ASN ASN A . n A 1 67 GLY 67 84 84 GLY GLY A . n A 1 68 GLN 68 85 85 GLN GLN A . n A 1 69 ALA 69 86 86 ALA ALA A . n A 1 70 ILE 70 87 87 ILE ILE A . n A 1 71 ASN 71 88 88 ASN ASN A . n A 1 72 ILE 72 89 89 ILE ILE A . n A 1 73 ALA 73 90 90 ALA ALA A . n A 1 74 ALA 74 91 91 ALA ALA A . n A 1 75 PRO 75 92 92 PRO PRO A . n A 1 76 LYS 76 93 93 LYS LYS A . n A 1 77 GLY 77 94 94 GLY GLY A . n A 1 78 GLN 78 95 95 GLN GLN A . n A 1 79 ILE 79 96 96 ILE ILE A . n A 1 80 PRO 80 97 97 PRO PRO A . n A 1 81 GLY 81 98 98 GLY GLY A . n A 1 82 THR 82 99 99 THR THR A . n A 1 83 TYR 83 100 100 TYR TYR A . n A 1 84 ASN 84 101 101 ASN ASN A . n A 1 85 LEU 85 102 102 LEU LEU A . n A 1 86 THR 86 103 103 THR THR A . n A 1 87 TYR 87 104 104 TYR TYR A . n A 1 88 LYS 88 105 105 LYS LYS A . n A 1 89 VAL 89 106 106 VAL VAL A . n A 1 90 LEU 90 107 107 LEU LEU A . n A 1 91 VAL 91 108 108 VAL VAL A . n A 1 92 GLY 92 109 109 GLY GLY A . n A 1 93 THR 93 110 110 THR THR A . n A 1 94 ASP 94 111 111 ASP ASP A . n A 1 95 ALA 95 112 112 ALA ALA A . n A 1 96 VAL 96 113 113 VAL VAL A . n A 1 97 ASN 97 114 114 ASN ASN A . n A 1 98 ASN 98 115 115 ASN ASN A . n A 1 99 VAL 99 116 116 VAL VAL A . n A 1 100 VAL 100 117 117 VAL VAL A . n A 1 101 ASN 101 118 118 ASN ASN A . n A 1 102 LYS 102 119 119 LYS LYS A . n A 1 103 VAL 103 120 120 VAL VAL A . n A 1 104 THR 104 121 121 THR THR A . n A 1 105 ALA 105 122 122 ALA ALA A . n A 1 106 SER 106 123 123 SER SER A . n A 1 107 GLY 107 124 124 GLY GLY A . n A 1 108 GLY 108 125 125 GLY GLY A . n A 1 109 ASP 109 126 126 ASP ASP A . n A 1 110 LYS 110 127 127 LYS LYS A . n A 1 111 PRO 111 128 128 PRO PRO A . n A 1 112 SER 112 129 129 SER SER A . n A 1 113 CYS 113 130 130 CYS CYS A . n A 1 114 THR 114 131 131 THR THR A . n A 1 115 THR 115 132 132 THR THR A . n A 1 116 CYS 116 133 133 CYS CYS A . n A 1 117 THR 117 134 134 THR THR A . n A 1 118 THR 118 135 135 THR THR A . n A 1 119 THR 119 136 136 THR THR A . n A 1 120 THR 120 137 137 THR THR A . n A 1 121 PRO 121 138 138 PRO PRO A . n A 1 122 VAL 122 139 139 VAL VAL A . n A 1 123 THR 123 140 140 THR THR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT 1 201 201 ACT ACT A . C 3 HOH 1 301 40 HOH HOH A . C 3 HOH 2 302 106 HOH HOH A . C 3 HOH 3 303 93 HOH HOH A . C 3 HOH 4 304 30 HOH HOH A . C 3 HOH 5 305 22 HOH HOH A . C 3 HOH 6 306 12 HOH HOH A . C 3 HOH 7 307 76 HOH HOH A . C 3 HOH 8 308 92 HOH HOH A . C 3 HOH 9 309 46 HOH HOH A . C 3 HOH 10 310 75 HOH HOH A . C 3 HOH 11 311 14 HOH HOH A . C 3 HOH 12 312 70 HOH HOH A . C 3 HOH 13 313 49 HOH HOH A . C 3 HOH 14 314 36 HOH HOH A . C 3 HOH 15 315 95 HOH HOH A . C 3 HOH 16 316 66 HOH HOH A . C 3 HOH 17 317 11 HOH HOH A . C 3 HOH 18 318 57 HOH HOH A . C 3 HOH 19 319 4 HOH HOH A . C 3 HOH 20 320 96 HOH HOH A . C 3 HOH 21 321 21 HOH HOH A . C 3 HOH 22 322 2 HOH HOH A . C 3 HOH 23 323 61 HOH HOH A . C 3 HOH 24 324 9 HOH HOH A . C 3 HOH 25 325 55 HOH HOH A . C 3 HOH 26 326 43 HOH HOH A . C 3 HOH 27 327 84 HOH HOH A . C 3 HOH 28 328 51 HOH HOH A . C 3 HOH 29 329 81 HOH HOH A . C 3 HOH 30 330 64 HOH HOH A . C 3 HOH 31 331 24 HOH HOH A . C 3 HOH 32 332 3 HOH HOH A . C 3 HOH 33 333 16 HOH HOH A . C 3 HOH 34 334 37 HOH HOH A . C 3 HOH 35 335 34 HOH HOH A . C 3 HOH 36 336 52 HOH HOH A . C 3 HOH 37 337 29 HOH HOH A . C 3 HOH 38 338 38 HOH HOH A . C 3 HOH 39 339 74 HOH HOH A . C 3 HOH 40 340 6 HOH HOH A . C 3 HOH 41 341 8 HOH HOH A . C 3 HOH 42 342 73 HOH HOH A . C 3 HOH 43 343 25 HOH HOH A . C 3 HOH 44 344 7 HOH HOH A . C 3 HOH 45 345 17 HOH HOH A . C 3 HOH 46 346 82 HOH HOH A . C 3 HOH 47 347 26 HOH HOH A . C 3 HOH 48 348 10 HOH HOH A . C 3 HOH 49 349 15 HOH HOH A . C 3 HOH 50 350 99 HOH HOH A . C 3 HOH 51 351 97 HOH HOH A . C 3 HOH 52 352 112 HOH HOH A . C 3 HOH 53 353 48 HOH HOH A . C 3 HOH 54 354 5 HOH HOH A . C 3 HOH 55 355 23 HOH HOH A . C 3 HOH 56 356 69 HOH HOH A . C 3 HOH 57 357 45 HOH HOH A . C 3 HOH 58 358 35 HOH HOH A . C 3 HOH 59 359 19 HOH HOH A . C 3 HOH 60 360 63 HOH HOH A . C 3 HOH 61 361 13 HOH HOH A . C 3 HOH 62 362 56 HOH HOH A . C 3 HOH 63 363 91 HOH HOH A . C 3 HOH 64 364 53 HOH HOH A . C 3 HOH 65 365 113 HOH HOH A . C 3 HOH 66 366 110 HOH HOH A . C 3 HOH 67 367 62 HOH HOH A . C 3 HOH 68 368 90 HOH HOH A . C 3 HOH 69 369 98 HOH HOH A . C 3 HOH 70 370 67 HOH HOH A . C 3 HOH 71 371 18 HOH HOH A . C 3 HOH 72 372 72 HOH HOH A . C 3 HOH 73 373 105 HOH HOH A . C 3 HOH 74 374 1 HOH HOH A . C 3 HOH 75 375 28 HOH HOH A . C 3 HOH 76 376 109 HOH HOH A . C 3 HOH 77 377 41 HOH HOH A . C 3 HOH 78 378 100 HOH HOH A . C 3 HOH 79 379 32 HOH HOH A . C 3 HOH 80 380 65 HOH HOH A . C 3 HOH 81 381 89 HOH HOH A . C 3 HOH 82 382 78 HOH HOH A . C 3 HOH 83 383 27 HOH HOH A . C 3 HOH 84 384 33 HOH HOH A . C 3 HOH 85 385 107 HOH HOH A . C 3 HOH 86 386 44 HOH HOH A . C 3 HOH 87 387 79 HOH HOH A . C 3 HOH 88 388 42 HOH HOH A . C 3 HOH 89 389 58 HOH HOH A . C 3 HOH 90 390 102 HOH HOH A . C 3 HOH 91 391 108 HOH HOH A . C 3 HOH 92 392 31 HOH HOH A . C 3 HOH 93 393 77 HOH HOH A . C 3 HOH 94 394 60 HOH HOH A . C 3 HOH 95 395 59 HOH HOH A . C 3 HOH 96 396 115 HOH HOH A . C 3 HOH 97 397 20 HOH HOH A . C 3 HOH 98 398 68 HOH HOH A . C 3 HOH 99 399 94 HOH HOH A . C 3 HOH 100 400 101 HOH HOH A . C 3 HOH 101 401 39 HOH HOH A . C 3 HOH 102 402 111 HOH HOH A . C 3 HOH 103 403 116 HOH HOH A . C 3 HOH 104 404 103 HOH HOH A . C 3 HOH 105 405 114 HOH HOH A . C 3 HOH 106 406 80 HOH HOH A . C 3 HOH 107 407 71 HOH HOH A . C 3 HOH 108 408 47 HOH HOH A . C 3 HOH 109 409 50 HOH HOH A . C 3 HOH 110 410 104 HOH HOH A . C 3 HOH 111 411 86 HOH HOH A . C 3 HOH 112 412 85 HOH HOH A . C 3 HOH 113 413 83 HOH HOH A . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id ASN _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 118 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id ND2 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id ASN _pdbx_unobs_or_zero_occ_atoms.label_seq_id 101 _pdbx_unobs_or_zero_occ_atoms.label_atom_id ND2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0425 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2.multiplex ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2.multiplex ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 90 _cell.angle_beta_esd ? _cell.angle_gamma 120 _cell.angle_gamma_esd ? _cell.entry_id 9IFR _cell.details ? _cell.formula_units_Z ? _cell.length_a 93.859 _cell.length_a_esd ? _cell.length_b 93.859 _cell.length_b_esd ? _cell.length_c 21.994 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9IFR _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9IFR _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;5 mg/mL protein, sample buffer: 20 mM Tris, 100 mM NaCl, pH 8.0, crystallization buffer: 0.2 M Ammonium Sulphate, 0.2 M Sodium/Potassium Tartrate, pH 5.5, droplet size 4 microL at 1:1 protein:crystal buffer ratio, with 1mL crystallization buffer in reservoir. ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-08-08 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 26.87 _reflns.entry_id 9IFR _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.77 _reflns.d_resolution_low 81.285 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11209 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.91 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 38.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.161 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.993 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.77 _reflns_shell.d_res_low 1.80 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 0.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 547 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 29.5 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 3.626 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.401 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 97.16 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -0.616 _refine.aniso_B[1][2] -0.308 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] -0.616 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 1.998 _refine.B_iso_max ? _refine.B_iso_mean 32.452 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.960 _refine.details 'Hydrogens have not been used' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9IFR _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.770 _refine.ls_d_res_low 81.284 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11203 _refine.ls_number_reflns_R_free 569 _refine.ls_number_reflns_R_work 10634 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.857 _refine.ls_percent_reflns_R_free 5.079 _refine.ls_R_factor_all 0.201 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2094 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2001 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.139 _refine.pdbx_overall_ESU_R_Free 0.115 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.770 _refine_hist.d_res_low 81.284 _refine_hist.number_atoms_solvent 113 _refine_hist.number_atoms_total 988 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 871 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.015 0.011 893 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.544 1.788 1233 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 5.416 5.000 124 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 14.201 10.000 133 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.874 10.000 24 ? r_dihedral_angle_6_deg ? ? 'X-RAY DIFFRACTION' ? 0.066 0.200 165 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 655 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.226 0.200 373 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.301 0.200 644 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.269 0.200 68 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.233 0.200 43 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.144 0.200 21 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 3.515 2.964 494 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.843 5.278 615 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 5.642 3.335 399 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 7.148 5.967 617 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 6.858 43.128 1378 ? r_lrange_it ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.770 1.816 836 . 39 781 98.0861 . 0.405 . . 0.406 . . . . . 0.401 . . . . . 20 . 0.862 0.896 0.384 'X-RAY DIFFRACTION' 1.816 1.866 781 . 28 753 100.0000 . 0.369 . . 0.368 . . . . . 0.364 . . . . . 20 . 0.889 0.873 0.405 'X-RAY DIFFRACTION' 1.866 1.920 771 . 30 741 100.0000 . 0.326 . . 0.325 . . . . . 0.328 . . . . . 20 . 0.905 0.902 0.353 'X-RAY DIFFRACTION' 1.920 1.979 768 . 42 726 100.0000 . 0.280 . . 0.279 . . . . . 0.284 . . . . . 20 . 0.932 0.932 0.303 'X-RAY DIFFRACTION' 1.979 2.044 720 . 27 693 100.0000 . 0.256 . . 0.252 . . . . . 0.250 . . . . . 20 . 0.945 0.919 0.364 'X-RAY DIFFRACTION' 2.044 2.115 703 . 38 665 100.0000 . 0.236 . . 0.235 . . . . . 0.228 . . . . . 20 . 0.956 0.955 0.249 'X-RAY DIFFRACTION' 2.115 2.195 704 . 33 671 100.0000 . 0.225 . . 0.223 . . . . . 0.215 . . . . . 20 . 0.960 0.951 0.268 'X-RAY DIFFRACTION' 2.195 2.285 635 . 24 611 100.0000 . 0.226 . . 0.224 . . . . . 0.208 . . . . . 20 . 0.960 0.956 0.273 'X-RAY DIFFRACTION' 2.285 2.386 632 . 47 585 100.0000 . 0.241 . . 0.243 . . . . . 0.226 . . . . . 20 . 0.957 0.968 0.216 'X-RAY DIFFRACTION' 2.386 2.503 602 . 29 573 100.0000 . 0.242 . . 0.243 . . . . . 0.224 . . . . . 20 . 0.956 0.973 0.218 'X-RAY DIFFRACTION' 2.503 2.638 572 . 39 533 100.0000 . 0.228 . . 0.227 . . . . . 0.207 . . . . . 20 . 0.965 0.948 0.247 'X-RAY DIFFRACTION' 2.638 2.798 567 . 35 532 100.0000 . 0.212 . . 0.211 . . . . . 0.189 . . . . . 20 . 0.968 0.972 0.230 'X-RAY DIFFRACTION' 2.798 2.990 506 . 37 469 100.0000 . 0.212 . . 0.206 . . . . . 0.182 . . . . . 20 . 0.973 0.943 0.306 'X-RAY DIFFRACTION' 2.990 3.230 494 . 23 471 100.0000 . 0.168 . . 0.169 . . . . . 0.147 . . . . . 20 . 0.981 0.984 0.146 'X-RAY DIFFRACTION' 3.230 3.537 437 . 25 412 100.0000 . 0.157 . . 0.155 . . . . . 0.139 . . . . . 20 . 0.985 0.973 0.187 'X-RAY DIFFRACTION' 3.537 3.954 411 . 16 395 100.0000 . 0.143 . . 0.143 . . . . . 0.127 . . . . . 20 . 0.987 0.985 0.148 'X-RAY DIFFRACTION' 3.954 4.564 366 . 23 343 100.0000 . 0.122 . . 0.121 . . . . . 0.112 . . . . . 20 . 0.990 0.987 0.141 'X-RAY DIFFRACTION' 4.564 5.585 316 . 13 303 100.0000 . 0.132 . . 0.130 . . . . . 0.115 . . . . . 20 . 0.988 0.982 0.187 'X-RAY DIFFRACTION' 5.585 7.880 247 . 8 239 100.0000 . 0.192 . . 0.192 . . . . . 0.173 . . . . . 20 . 0.979 0.970 0.205 'X-RAY DIFFRACTION' 7.880 81.284 151 . 13 138 100.0000 . 0.180 . . 0.189 . . . . . 0.195 . . . . . 20 . 0.979 0.991 0.097 # _struct.entry_id 9IFR _struct.title ;CLIPPER domain from the Gram-negative fibrillar adhesin "B9T28_05395 ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9IFR _struct_keywords.text 'Fibrillar adhesin, Adhesin, Isopeptide bond, Intramolecular isopeptide bond, CELL ADHESION' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A1Y3CHT7_9GAMM _struct_ref.pdbx_db_accession A0A1Y3CHT7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KPTVDVVKTTTATTAKVGDTIDYTVKVTVANSQTTDALTLNDTLGQGLSFVSGTAPTGWTLTGNGQAINIAAPKGQIPGT YNLTYKVLVGTDAVNNVVNKVTASGGDKPSCTTCTTTTPVT ; _struct_ref.pdbx_align_begin 708 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9IFR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 123 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A1Y3CHT7 _struct_ref_seq.db_align_beg 708 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 828 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 140 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9IFR GLY A 1 ? UNP A0A1Y3CHT7 ? ? 'expression tag' 18 1 1 9IFR PRO A 2 ? UNP A0A1Y3CHT7 ? ? 'expression tag' 19 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 130 ? 1 MORE 0 ? 1 'SSA (A^2)' 6380 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'A single prominent monomeric peak can be observed via size exclusion chromatography.' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 113 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 116 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 130 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 133 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.009 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 113 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 116 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 130 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 133 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 50 ? THR A 56 ? LEU A 67 THR A 73 AA1 2 GLY A 81 ? VAL A 91 ? GLY A 98 VAL A 108 AA1 3 THR A 22 ? ALA A 32 ? THR A 39 ALA A 49 AA1 4 THR A 5 ? THR A 12 ? THR A 22 THR A 29 AA1 5 SER A 112 ? THR A 115 ? SER A 129 THR A 132 AA2 1 THR A 62 ? ASN A 66 ? THR A 79 ASN A 83 AA2 2 ALA A 69 ? ALA A 74 ? ALA A 86 ALA A 91 AA2 3 LEU A 40 ? THR A 45 ? LEU A 57 THR A 62 AA2 4 VAL A 103 ? SER A 106 ? VAL A 120 SER A 123 AA3 1 ASN A 98 ? VAL A 100 ? ASN A 115 VAL A 117 AA3 2 THR A 119 ? PRO A 121 ? THR A 136 PRO A 138 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 54 ? N SER A 71 O LYS A 88 ? O LYS A 105 AA1 2 3 O LEU A 85 ? O LEU A 102 N VAL A 27 ? N VAL A 44 AA1 3 4 O LYS A 28 ? O LYS A 45 N VAL A 9 ? N VAL A 26 AA1 4 5 N LYS A 10 ? N LYS A 27 O THR A 115 ? O THR A 132 AA2 1 2 N THR A 64 ? N THR A 81 O ASN A 71 ? O ASN A 88 AA2 2 3 O ILE A 72 ? O ILE A 89 N LEU A 42 ? N LEU A 59 AA2 3 4 N ASN A 43 ? N ASN A 60 O THR A 104 ? O THR A 121 AA3 1 2 N VAL A 99 ? N VAL A 116 O THR A 120 ? O THR A 137 # _pdbx_entry_details.entry_id 9IFR _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NZ _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 27 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 CG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASN _pdbx_validate_close_contact.auth_seq_id_2 118 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.32 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 50 ? ? 85.17 -71.62 2 1 VAL A 70 ? ? -105.82 -63.57 3 1 ASN A 114 ? ? 70.38 -47.79 4 1 LYS A 119 ? ? -161.19 115.25 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 339 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ASN N N N N 21 ASN CA C N S 22 ASN C C N N 23 ASN O O N N 24 ASN CB C N N 25 ASN CG C N N 26 ASN OD1 O N N 27 ASN ND2 N N N 28 ASN OXT O N N 29 ASN H H N N 30 ASN H2 H N N 31 ASN HA H N N 32 ASN HB2 H N N 33 ASN HB3 H N N 34 ASN HD21 H N N 35 ASN HD22 H N N 36 ASN HXT H N N 37 ASP N N N N 38 ASP CA C N S 39 ASP C C N N 40 ASP O O N N 41 ASP CB C N N 42 ASP CG C N N 43 ASP OD1 O N N 44 ASP OD2 O N N 45 ASP OXT O N N 46 ASP H H N N 47 ASP H2 H N N 48 ASP HA H N N 49 ASP HB2 H N N 50 ASP HB3 H N N 51 ASP HD2 H N N 52 ASP HXT H N N 53 CYS N N N N 54 CYS CA C N R 55 CYS C C N N 56 CYS O O N N 57 CYS CB C N N 58 CYS SG S N N 59 CYS OXT O N N 60 CYS H H N N 61 CYS H2 H N N 62 CYS HA H N N 63 CYS HB2 H N N 64 CYS HB3 H N N 65 CYS HG H N N 66 CYS HXT H N N 67 GLN N N N N 68 GLN CA C N S 69 GLN C C N N 70 GLN O O N N 71 GLN CB C N N 72 GLN CG C N N 73 GLN CD C N N 74 GLN OE1 O N N 75 GLN NE2 N N N 76 GLN OXT O N N 77 GLN H H N N 78 GLN H2 H N N 79 GLN HA H N N 80 GLN HB2 H N N 81 GLN HB3 H N N 82 GLN HG2 H N N 83 GLN HG3 H N N 84 GLN HE21 H N N 85 GLN HE22 H N N 86 GLN HXT H N N 87 GLY N N N N 88 GLY CA C N N 89 GLY C C N N 90 GLY O O N N 91 GLY OXT O N N 92 GLY H H N N 93 GLY H2 H N N 94 GLY HA2 H N N 95 GLY HA3 H N N 96 GLY HXT H N N 97 HOH O O N N 98 HOH H1 H N N 99 HOH H2 H N N 100 ILE N N N N 101 ILE CA C N S 102 ILE C C N N 103 ILE O O N N 104 ILE CB C N S 105 ILE CG1 C N N 106 ILE CG2 C N N 107 ILE CD1 C N N 108 ILE OXT O N N 109 ILE H H N N 110 ILE H2 H N N 111 ILE HA H N N 112 ILE HB H N N 113 ILE HG12 H N N 114 ILE HG13 H N N 115 ILE HG21 H N N 116 ILE HG22 H N N 117 ILE HG23 H N N 118 ILE HD11 H N N 119 ILE HD12 H N N 120 ILE HD13 H N N 121 ILE HXT H N N 122 LEU N N N N 123 LEU CA C N S 124 LEU C C N N 125 LEU O O N N 126 LEU CB C N N 127 LEU CG C N N 128 LEU CD1 C N N 129 LEU CD2 C N N 130 LEU OXT O N N 131 LEU H H N N 132 LEU H2 H N N 133 LEU HA H N N 134 LEU HB2 H N N 135 LEU HB3 H N N 136 LEU HG H N N 137 LEU HD11 H N N 138 LEU HD12 H N N 139 LEU HD13 H N N 140 LEU HD21 H N N 141 LEU HD22 H N N 142 LEU HD23 H N N 143 LEU HXT H N N 144 LYS N N N N 145 LYS CA C N S 146 LYS C C N N 147 LYS O O N N 148 LYS CB C N N 149 LYS CG C N N 150 LYS CD C N N 151 LYS CE C N N 152 LYS NZ N N N 153 LYS OXT O N N 154 LYS H H N N 155 LYS H2 H N N 156 LYS HA H N N 157 LYS HB2 H N N 158 LYS HB3 H N N 159 LYS HG2 H N N 160 LYS HG3 H N N 161 LYS HD2 H N N 162 LYS HD3 H N N 163 LYS HE2 H N N 164 LYS HE3 H N N 165 LYS HZ1 H N N 166 LYS HZ2 H N N 167 LYS HZ3 H N N 168 LYS HXT H N N 169 PHE N N N N 170 PHE CA C N S 171 PHE C C N N 172 PHE O O N N 173 PHE CB C N N 174 PHE CG C Y N 175 PHE CD1 C Y N 176 PHE CD2 C Y N 177 PHE CE1 C Y N 178 PHE CE2 C Y N 179 PHE CZ C Y N 180 PHE OXT O N N 181 PHE H H N N 182 PHE H2 H N N 183 PHE HA H N N 184 PHE HB2 H N N 185 PHE HB3 H N N 186 PHE HD1 H N N 187 PHE HD2 H N N 188 PHE HE1 H N N 189 PHE HE2 H N N 190 PHE HZ H N N 191 PHE HXT H N N 192 PRO N N N N 193 PRO CA C N S 194 PRO C C N N 195 PRO O O N N 196 PRO CB C N N 197 PRO CG C N N 198 PRO CD C N N 199 PRO OXT O N N 200 PRO H H N N 201 PRO HA H N N 202 PRO HB2 H N N 203 PRO HB3 H N N 204 PRO HG2 H N N 205 PRO HG3 H N N 206 PRO HD2 H N N 207 PRO HD3 H N N 208 PRO HXT H N N 209 SER N N N N 210 SER CA C N S 211 SER C C N N 212 SER O O N N 213 SER CB C N N 214 SER OG O N N 215 SER OXT O N N 216 SER H H N N 217 SER H2 H N N 218 SER HA H N N 219 SER HB2 H N N 220 SER HB3 H N N 221 SER HG H N N 222 SER HXT H N N 223 THR N N N N 224 THR CA C N S 225 THR C C N N 226 THR O O N N 227 THR CB C N R 228 THR OG1 O N N 229 THR CG2 C N N 230 THR OXT O N N 231 THR H H N N 232 THR H2 H N N 233 THR HA H N N 234 THR HB H N N 235 THR HG1 H N N 236 THR HG21 H N N 237 THR HG22 H N N 238 THR HG23 H N N 239 THR HXT H N N 240 TRP N N N N 241 TRP CA C N S 242 TRP C C N N 243 TRP O O N N 244 TRP CB C N N 245 TRP CG C Y N 246 TRP CD1 C Y N 247 TRP CD2 C Y N 248 TRP NE1 N Y N 249 TRP CE2 C Y N 250 TRP CE3 C Y N 251 TRP CZ2 C Y N 252 TRP CZ3 C Y N 253 TRP CH2 C Y N 254 TRP OXT O N N 255 TRP H H N N 256 TRP H2 H N N 257 TRP HA H N N 258 TRP HB2 H N N 259 TRP HB3 H N N 260 TRP HD1 H N N 261 TRP HE1 H N N 262 TRP HE3 H N N 263 TRP HZ2 H N N 264 TRP HZ3 H N N 265 TRP HH2 H N N 266 TRP HXT H N N 267 TYR N N N N 268 TYR CA C N S 269 TYR C C N N 270 TYR O O N N 271 TYR CB C N N 272 TYR CG C Y N 273 TYR CD1 C Y N 274 TYR CD2 C Y N 275 TYR CE1 C Y N 276 TYR CE2 C Y N 277 TYR CZ C Y N 278 TYR OH O N N 279 TYR OXT O N N 280 TYR H H N N 281 TYR H2 H N N 282 TYR HA H N N 283 TYR HB2 H N N 284 TYR HB3 H N N 285 TYR HD1 H N N 286 TYR HD2 H N N 287 TYR HE1 H N N 288 TYR HE2 H N N 289 TYR HH H N N 290 TYR HXT H N N 291 VAL N N N N 292 VAL CA C N S 293 VAL C C N N 294 VAL O O N N 295 VAL CB C N N 296 VAL CG1 C N N 297 VAL CG2 C N N 298 VAL OXT O N N 299 VAL H H N N 300 VAL H2 H N N 301 VAL HA H N N 302 VAL HB H N N 303 VAL HG11 H N N 304 VAL HG12 H N N 305 VAL HG13 H N N 306 VAL HG21 H N N 307 VAL HG22 H N N 308 VAL HG23 H N N 309 VAL HXT H N N 310 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ASN N CA sing N N 19 ASN N H sing N N 20 ASN N H2 sing N N 21 ASN CA C sing N N 22 ASN CA CB sing N N 23 ASN CA HA sing N N 24 ASN C O doub N N 25 ASN C OXT sing N N 26 ASN CB CG sing N N 27 ASN CB HB2 sing N N 28 ASN CB HB3 sing N N 29 ASN CG OD1 doub N N 30 ASN CG ND2 sing N N 31 ASN ND2 HD21 sing N N 32 ASN ND2 HD22 sing N N 33 ASN OXT HXT sing N N 34 ASP N CA sing N N 35 ASP N H sing N N 36 ASP N H2 sing N N 37 ASP CA C sing N N 38 ASP CA CB sing N N 39 ASP CA HA sing N N 40 ASP C O doub N N 41 ASP C OXT sing N N 42 ASP CB CG sing N N 43 ASP CB HB2 sing N N 44 ASP CB HB3 sing N N 45 ASP CG OD1 doub N N 46 ASP CG OD2 sing N N 47 ASP OD2 HD2 sing N N 48 ASP OXT HXT sing N N 49 CYS N CA sing N N 50 CYS N H sing N N 51 CYS N H2 sing N N 52 CYS CA C sing N N 53 CYS CA CB sing N N 54 CYS CA HA sing N N 55 CYS C O doub N N 56 CYS C OXT sing N N 57 CYS CB SG sing N N 58 CYS CB HB2 sing N N 59 CYS CB HB3 sing N N 60 CYS SG HG sing N N 61 CYS OXT HXT sing N N 62 GLN N CA sing N N 63 GLN N H sing N N 64 GLN N H2 sing N N 65 GLN CA C sing N N 66 GLN CA CB sing N N 67 GLN CA HA sing N N 68 GLN C O doub N N 69 GLN C OXT sing N N 70 GLN CB CG sing N N 71 GLN CB HB2 sing N N 72 GLN CB HB3 sing N N 73 GLN CG CD sing N N 74 GLN CG HG2 sing N N 75 GLN CG HG3 sing N N 76 GLN CD OE1 doub N N 77 GLN CD NE2 sing N N 78 GLN NE2 HE21 sing N N 79 GLN NE2 HE22 sing N N 80 GLN OXT HXT sing N N 81 GLY N CA sing N N 82 GLY N H sing N N 83 GLY N H2 sing N N 84 GLY CA C sing N N 85 GLY CA HA2 sing N N 86 GLY CA HA3 sing N N 87 GLY C O doub N N 88 GLY C OXT sing N N 89 GLY OXT HXT sing N N 90 HOH O H1 sing N N 91 HOH O H2 sing N N 92 ILE N CA sing N N 93 ILE N H sing N N 94 ILE N H2 sing N N 95 ILE CA C sing N N 96 ILE CA CB sing N N 97 ILE CA HA sing N N 98 ILE C O doub N N 99 ILE C OXT sing N N 100 ILE CB CG1 sing N N 101 ILE CB CG2 sing N N 102 ILE CB HB sing N N 103 ILE CG1 CD1 sing N N 104 ILE CG1 HG12 sing N N 105 ILE CG1 HG13 sing N N 106 ILE CG2 HG21 sing N N 107 ILE CG2 HG22 sing N N 108 ILE CG2 HG23 sing N N 109 ILE CD1 HD11 sing N N 110 ILE CD1 HD12 sing N N 111 ILE CD1 HD13 sing N N 112 ILE OXT HXT sing N N 113 LEU N CA sing N N 114 LEU N H sing N N 115 LEU N H2 sing N N 116 LEU CA C sing N N 117 LEU CA CB sing N N 118 LEU CA HA sing N N 119 LEU C O doub N N 120 LEU C OXT sing N N 121 LEU CB CG sing N N 122 LEU CB HB2 sing N N 123 LEU CB HB3 sing N N 124 LEU CG CD1 sing N N 125 LEU CG CD2 sing N N 126 LEU CG HG sing N N 127 LEU CD1 HD11 sing N N 128 LEU CD1 HD12 sing N N 129 LEU CD1 HD13 sing N N 130 LEU CD2 HD21 sing N N 131 LEU CD2 HD22 sing N N 132 LEU CD2 HD23 sing N N 133 LEU OXT HXT sing N N 134 LYS N CA sing N N 135 LYS N H sing N N 136 LYS N H2 sing N N 137 LYS CA C sing N N 138 LYS CA CB sing N N 139 LYS CA HA sing N N 140 LYS C O doub N N 141 LYS C OXT sing N N 142 LYS CB CG sing N N 143 LYS CB HB2 sing N N 144 LYS CB HB3 sing N N 145 LYS CG CD sing N N 146 LYS CG HG2 sing N N 147 LYS CG HG3 sing N N 148 LYS CD CE sing N N 149 LYS CD HD2 sing N N 150 LYS CD HD3 sing N N 151 LYS CE NZ sing N N 152 LYS CE HE2 sing N N 153 LYS CE HE3 sing N N 154 LYS NZ HZ1 sing N N 155 LYS NZ HZ2 sing N N 156 LYS NZ HZ3 sing N N 157 LYS OXT HXT sing N N 158 PHE N CA sing N N 159 PHE N H sing N N 160 PHE N H2 sing N N 161 PHE CA C sing N N 162 PHE CA CB sing N N 163 PHE CA HA sing N N 164 PHE C O doub N N 165 PHE C OXT sing N N 166 PHE CB CG sing N N 167 PHE CB HB2 sing N N 168 PHE CB HB3 sing N N 169 PHE CG CD1 doub Y N 170 PHE CG CD2 sing Y N 171 PHE CD1 CE1 sing Y N 172 PHE CD1 HD1 sing N N 173 PHE CD2 CE2 doub Y N 174 PHE CD2 HD2 sing N N 175 PHE CE1 CZ doub Y N 176 PHE CE1 HE1 sing N N 177 PHE CE2 CZ sing Y N 178 PHE CE2 HE2 sing N N 179 PHE CZ HZ sing N N 180 PHE OXT HXT sing N N 181 PRO N CA sing N N 182 PRO N CD sing N N 183 PRO N H sing N N 184 PRO CA C sing N N 185 PRO CA CB sing N N 186 PRO CA HA sing N N 187 PRO C O doub N N 188 PRO C OXT sing N N 189 PRO CB CG sing N N 190 PRO CB HB2 sing N N 191 PRO CB HB3 sing N N 192 PRO CG CD sing N N 193 PRO CG HG2 sing N N 194 PRO CG HG3 sing N N 195 PRO CD HD2 sing N N 196 PRO CD HD3 sing N N 197 PRO OXT HXT sing N N 198 SER N CA sing N N 199 SER N H sing N N 200 SER N H2 sing N N 201 SER CA C sing N N 202 SER CA CB sing N N 203 SER CA HA sing N N 204 SER C O doub N N 205 SER C OXT sing N N 206 SER CB OG sing N N 207 SER CB HB2 sing N N 208 SER CB HB3 sing N N 209 SER OG HG sing N N 210 SER OXT HXT sing N N 211 THR N CA sing N N 212 THR N H sing N N 213 THR N H2 sing N N 214 THR CA C sing N N 215 THR CA CB sing N N 216 THR CA HA sing N N 217 THR C O doub N N 218 THR C OXT sing N N 219 THR CB OG1 sing N N 220 THR CB CG2 sing N N 221 THR CB HB sing N N 222 THR OG1 HG1 sing N N 223 THR CG2 HG21 sing N N 224 THR CG2 HG22 sing N N 225 THR CG2 HG23 sing N N 226 THR OXT HXT sing N N 227 TRP N CA sing N N 228 TRP N H sing N N 229 TRP N H2 sing N N 230 TRP CA C sing N N 231 TRP CA CB sing N N 232 TRP CA HA sing N N 233 TRP C O doub N N 234 TRP C OXT sing N N 235 TRP CB CG sing N N 236 TRP CB HB2 sing N N 237 TRP CB HB3 sing N N 238 TRP CG CD1 doub Y N 239 TRP CG CD2 sing Y N 240 TRP CD1 NE1 sing Y N 241 TRP CD1 HD1 sing N N 242 TRP CD2 CE2 doub Y N 243 TRP CD2 CE3 sing Y N 244 TRP NE1 CE2 sing Y N 245 TRP NE1 HE1 sing N N 246 TRP CE2 CZ2 sing Y N 247 TRP CE3 CZ3 doub Y N 248 TRP CE3 HE3 sing N N 249 TRP CZ2 CH2 doub Y N 250 TRP CZ2 HZ2 sing N N 251 TRP CZ3 CH2 sing Y N 252 TRP CZ3 HZ3 sing N N 253 TRP CH2 HH2 sing N N 254 TRP OXT HXT sing N N 255 TYR N CA sing N N 256 TYR N H sing N N 257 TYR N H2 sing N N 258 TYR CA C sing N N 259 TYR CA CB sing N N 260 TYR CA HA sing N N 261 TYR C O doub N N 262 TYR C OXT sing N N 263 TYR CB CG sing N N 264 TYR CB HB2 sing N N 265 TYR CB HB3 sing N N 266 TYR CG CD1 doub Y N 267 TYR CG CD2 sing Y N 268 TYR CD1 CE1 sing Y N 269 TYR CD1 HD1 sing N N 270 TYR CD2 CE2 doub Y N 271 TYR CD2 HD2 sing N N 272 TYR CE1 CZ doub Y N 273 TYR CE1 HE1 sing N N 274 TYR CE2 CZ sing Y N 275 TYR CE2 HE2 sing N N 276 TYR CZ OH sing N N 277 TYR OH HH sing N N 278 TYR OXT HXT sing N N 279 VAL N CA sing N N 280 VAL N H sing N N 281 VAL N H2 sing N N 282 VAL CA C sing N N 283 VAL CA CB sing N N 284 VAL CA HA sing N N 285 VAL C O doub N N 286 VAL C OXT sing N N 287 VAL CB CG1 sing N N 288 VAL CB CG2 sing N N 289 VAL CB HB sing N N 290 VAL CG1 HG11 sing N N 291 VAL CG1 HG12 sing N N 292 VAL CG1 HG13 sing N N 293 VAL CG2 HG21 sing N N 294 VAL CG2 HG22 sing N N 295 VAL CG2 HG23 sing N N 296 VAL OXT HXT sing N N 297 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Engineering and Physical Sciences Research Council' 'United Kingdom' EP/X525674/1 1 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/W013959/1 2 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/T008741/1 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9IFR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.010654 _atom_sites.fract_transf_matrix[1][2] 0.006151 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012303 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.045467 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.3103 20.8439 1.0201 10.2075 1.5888 0.5687 0.8651 51.6512 0.2156 H 1 1 0.4930 10.5109 0.3229 26.1257 0.1402 3.1424 0.0408 57.7997 0.0030 N 7 7 12.2220 0.0057 3.1346 9.8933 2.0141 28.9975 1.1672 0.5826 -11.5379 O 8 8 3.0487 13.2771 2.2870 5.7011 1.5464 0.3239 0.8671 32.9089 0.2508 O-1 8 9 4.1952 12.8573 1.6411 4.1724 1.5281 47.0179 -20.3246 -0.0140 21.9602 S 16 16 6.9054 1.4679 5.2035 22.2151 1.4379 0.2536 1.5863 56.1720 1.0497 # loop_ #