data_9IO3 # _entry.id 9IO3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.409 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9IO3 pdb_00009io3 10.2210/pdb9io3/pdb WWPDB D_1300041321 ? ? BMRB 36684 ? 10.13018/BMR36684 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-07-16 ? 2 'Structure model' 1 1 2026-01-28 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 9IO3 _pdbx_database_status.recvd_initial_deposition_date 2024-07-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'D-Amino Acid Substituted Antimicrobial Peptides Derived from Tilapia piscidin 4' _pdbx_database_related.db_id 36684 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 3 _pdbx_contact_author.email zoocjy@gate.sinica.edu.tw _pdbx_contact_author.name_first 'Jyh Yih' _pdbx_contact_author.name_last Chen _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7858-8236 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Huang, Y.P.' 1 0009-0008-7177-0711 'Chang, C.F.' 2 0000-0002-2961-0748 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country FR _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Eur.J.Med.Chem. _citation.journal_id_ASTM EJMCA5 _citation.journal_id_CSD 0493 _citation.journal_id_ISSN 0223-5234 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 265 _citation.language ? _citation.page_first 116083 _citation.page_last 116083 _citation.title 'Optimization of sequence and chiral content enhances therapeutic potential of tilapia piscidin peptides.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.ejmech.2023.116083 _citation.pdbx_database_id_PubMed 38150960 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hsu, P.H.' 1 ? primary 'Hazam, P.K.' 2 ? primary 'Huang, Y.P.' 3 ? primary 'Yeh, J.C.' 4 ? primary 'Chen, Y.R.' 5 ? primary 'Li, C.C.' 6 ? primary 'Chang, C.F.' 7 ? primary 'Liou, J.W.' 8 ? primary 'Chen, J.Y.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Tilapia piscidin 4 alpha' _entity.formula_weight 3089.948 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'FL(DLY)KL(DLE)KA(DLE)FS(DAL)PK(DAL)LK(DAR)LL(DAR)RR(DAR)R' _entity_poly.pdbx_seq_one_letter_code_can FLKKLLKALFSAPKALKRLLRRRRR _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 LEU n 1 3 DLY n 1 4 LYS n 1 5 LEU n 1 6 DLE n 1 7 LYS n 1 8 ALA n 1 9 DLE n 1 10 PHE n 1 11 SER n 1 12 DAL n 1 13 PRO n 1 14 LYS n 1 15 DAL n 1 16 LEU n 1 17 LYS n 1 18 DAR n 1 19 LEU n 1 20 LEU n 1 21 DAR n 1 22 ARG n 1 23 ARG n 1 24 DAR n 1 25 ARG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 25 _pdbx_entity_src_syn.organism_scientific 'Oreochromis niloticus' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 8128 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 DAR 'D-peptide linking' . D-ARGININE ? 'C6 H15 N4 O2 1' 175.209 DLE 'D-peptide linking' . D-LEUCINE ? 'C6 H13 N O2' 131.173 DLY 'D-peptide linking' . D-LYSINE ? 'C6 H14 N2 O2' 146.188 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 1 1 PHE PHE A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 DLY 3 3 3 DLY DLY A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 DLE 6 6 6 DLE DLE A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 DLE 9 9 9 DLE DLE A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 DAL 12 12 12 DAL DAL A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 DAL 15 15 15 DAL DAL A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 DAR 18 18 18 DAR DAR A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 DAR 21 21 21 DAR DAR A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 DAR 24 24 24 DAR DAR A . n A 1 25 ARG 25 25 25 ARG ARG A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9IO3 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 9IO3 _struct.title 'D-Amino Acid Substituted Antimicrobial Peptides Derived from Tilapia piscidin 4' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9IO3 _struct_keywords.text 'STRUCTURE FROM CYANA 3.98.15, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9IO3 _struct_ref.pdbx_db_accession 9IO3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9IO3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 25 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9IO3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 25 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 25 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id PRO _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 13 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ARG _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 25 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PRO _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 13 _struct_conf.end_auth_comp_id ARG _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 25 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 2 C ? ? ? 1_555 A DLY 3 N ? ? A LEU 2 A DLY 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A DLY 3 C ? ? ? 1_555 A LYS 4 N ? ? A DLY 3 A LYS 4 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A LEU 5 C ? ? ? 1_555 A DLE 6 N ? ? A LEU 5 A DLE 6 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A DLE 6 C ? ? ? 1_555 A LYS 7 N ? ? A DLE 6 A LYS 7 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A ALA 8 C ? ? ? 1_555 A DLE 9 N ? ? A ALA 8 A DLE 9 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? A DLE 9 C ? ? ? 1_555 A PHE 10 N ? ? A DLE 9 A PHE 10 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A SER 11 C ? ? ? 1_555 A DAL 12 N ? ? A SER 11 A DAL 12 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale8 covale both ? A DAL 12 C ? ? ? 1_555 A PRO 13 N ? ? A DAL 12 A PRO 13 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale9 covale both ? A LYS 14 C ? ? ? 1_555 A DAL 15 N ? ? A LYS 14 A DAL 15 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale10 covale both ? A DAL 15 C ? ? ? 1_555 A LEU 16 N ? ? A DAL 15 A LEU 16 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale11 covale both ? A LYS 17 C ? ? ? 1_555 A DAR 18 N ? ? A LYS 17 A DAR 18 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale12 covale both ? A DAR 18 C ? ? ? 1_555 A LEU 19 N ? ? A DAR 18 A LEU 19 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale13 covale both ? A LEU 20 C ? ? ? 1_555 A DAR 21 N ? ? A LEU 20 A DAR 21 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale14 covale both ? A DAR 21 C ? ? ? 1_555 A ARG 22 N ? ? A DAR 21 A ARG 22 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale15 covale both ? A ARG 23 C ? ? ? 1_555 A DAR 24 N ? ? A ARG 23 A DAR 24 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale16 covale both ? A DAR 24 C ? ? ? 1_555 A ARG 25 N ? ? A DAR 24 A ARG 25 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9IO3 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 2 ? ? -121.40 -74.18 2 1 LEU A 5 ? ? -142.07 -47.73 3 1 PRO A 13 ? ? -69.71 78.23 4 2 DLY A 3 ? ? 176.31 -141.83 5 2 LEU A 5 ? ? -144.17 -47.72 6 2 PRO A 13 ? ? -69.75 77.73 7 2 DAR A 21 ? ? -60.59 -66.89 8 3 DLY A 3 ? ? 173.09 -149.36 9 3 LEU A 5 ? ? -148.50 -48.75 10 3 PRO A 13 ? ? -69.79 78.18 11 4 DLY A 3 ? ? 175.18 -146.92 12 4 LEU A 5 ? ? -153.38 -50.26 13 4 PRO A 13 ? ? -69.76 78.33 14 5 LEU A 5 ? ? -141.94 -48.13 15 5 PRO A 13 ? ? -69.79 78.07 16 5 DAR A 21 ? ? -60.10 -68.48 17 6 DLY A 3 ? ? 170.71 -144.86 18 6 LEU A 5 ? ? -144.46 -49.96 19 6 PRO A 13 ? ? -69.70 77.71 20 7 DLY A 3 ? ? 176.52 -128.71 21 7 LEU A 5 ? ? -143.94 -52.85 22 7 PHE A 10 ? ? -67.87 -73.27 23 7 PRO A 13 ? ? -69.74 85.26 24 7 DAR A 21 ? ? -61.71 -66.73 25 8 DLY A 3 ? ? -61.28 -167.88 26 8 LEU A 5 ? ? -149.30 -52.75 27 8 PHE A 10 ? ? -174.57 70.25 28 8 SER A 11 ? ? -178.11 116.97 29 8 PRO A 13 ? ? -69.74 89.86 30 9 LEU A 2 ? ? -140.80 -60.70 31 9 LEU A 5 ? ? -145.66 -47.81 32 9 PRO A 13 ? ? -69.72 78.34 33 10 DLY A 3 ? ? 176.67 -141.58 34 10 LEU A 5 ? ? -141.34 -50.40 35 10 PRO A 13 ? ? -69.80 77.92 36 10 DAR A 21 ? ? -60.86 -65.04 37 11 DLY A 3 ? ? -63.62 -160.12 38 11 LEU A 5 ? ? -158.23 -51.14 39 11 PHE A 10 ? ? -77.28 -74.26 40 11 PRO A 13 ? ? -69.72 78.46 41 11 DAR A 21 ? ? -60.41 -67.98 42 12 DLY A 3 ? ? 177.11 -120.24 43 12 LEU A 5 ? ? -147.47 -51.69 44 12 PRO A 13 ? ? -69.74 78.00 45 13 DLY A 3 ? ? 174.81 -143.50 46 13 LEU A 5 ? ? -143.35 -48.21 47 13 SER A 11 ? ? -52.15 105.78 48 13 PRO A 13 ? ? -69.76 77.21 49 13 DAR A 21 ? ? -62.65 -70.20 50 14 DLY A 3 ? ? -62.67 -164.80 51 14 LEU A 5 ? ? -142.95 -51.00 52 14 PHE A 10 ? ? -59.37 -72.85 53 14 PRO A 13 ? ? -69.75 79.03 54 14 DAL A 15 ? ? -61.03 -64.70 55 15 LEU A 2 ? ? -96.54 -71.91 56 15 LEU A 5 ? ? -141.93 -54.87 57 15 PRO A 13 ? ? -69.75 78.27 58 15 DAR A 21 ? ? -60.60 -66.19 59 16 DLY A 3 ? ? 174.76 -145.82 60 16 LEU A 5 ? ? -144.82 -52.50 61 16 PHE A 10 ? ? -57.54 -74.50 62 16 SER A 11 ? ? -177.82 -173.42 63 16 PRO A 13 ? ? -69.74 83.47 64 16 DAR A 21 ? ? -59.04 -71.07 65 17 DLY A 3 ? ? -62.75 -165.25 66 17 LEU A 5 ? ? -143.21 -52.67 67 17 PRO A 13 ? ? -69.73 77.42 68 17 DAR A 21 ? ? -59.79 -70.65 69 18 DLY A 3 ? ? 179.18 -142.20 70 18 LEU A 5 ? ? -139.68 -48.52 71 18 SER A 11 ? ? -52.01 107.91 72 18 PRO A 13 ? ? -69.80 76.43 73 18 DAR A 21 ? ? -63.48 -72.34 74 19 LEU A 2 ? ? -65.86 -72.37 75 19 DLY A 3 ? ? 61.49 171.26 76 19 LEU A 5 ? ? -157.58 -52.73 77 19 PRO A 13 ? ? -69.77 77.36 78 20 LEU A 5 ? ? -156.87 -53.01 79 20 PHE A 10 ? ? -63.48 -74.65 80 20 PRO A 13 ? ? -69.76 78.62 # _pdbx_nmr_ensemble.entry_id 9IO3 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 9IO3 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2 mM TP4a, 40 % v/v [U-2H] TFE, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label TP4a _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details '2 mM peptide samples in 1x PBS at pH6.92 with 40%TFE-d3 and 10% D2O.' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 TP4a 2 ? mM 'natural abundance' 1 TFE 40 ? '% v/v' '[U-2H]' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.92 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label TP4-a.04252022 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H TOCSY' 1 isotropic 2 1 1 '2D 1H-1H COSY' 1 isotropic 3 1 1 '2D 1H-1H NOESY' 1 isotropic # _pdbx_nmr_refine.entry_id 9IO3 _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' NMRFAM-SPARKY ? 'Woonghee Lee and Poky Team Members (CU Denver)' 2 'structure calculation' CYANA 3.98.13 'Guntert, Mumenthaler and Wuthrich' 3 refinement CYANA ? 'Guntert, Mumenthaler and Wuthrich' 4 'peak picking' NMRFAM-SPARKY ? 'Woonghee Lee and Poky Team Members (CU Denver)' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 DAL N N N N 41 DAL CA C N R 42 DAL CB C N N 43 DAL C C N N 44 DAL O O N N 45 DAL OXT O N N 46 DAL H H N N 47 DAL H2 H N N 48 DAL HA H N N 49 DAL HB1 H N N 50 DAL HB2 H N N 51 DAL HB3 H N N 52 DAL HXT H N N 53 DAR N N N N 54 DAR CA C N R 55 DAR CB C N N 56 DAR CG C N N 57 DAR CD C N N 58 DAR NE N N N 59 DAR CZ C N N 60 DAR NH1 N N N 61 DAR NH2 N N N 62 DAR C C N N 63 DAR O O N N 64 DAR OXT O N N 65 DAR H H N N 66 DAR H2 H N N 67 DAR HA H N N 68 DAR HB2 H N N 69 DAR HB3 H N N 70 DAR HG2 H N N 71 DAR HG3 H N N 72 DAR HD2 H N N 73 DAR HD3 H N N 74 DAR HE H N N 75 DAR HH11 H N N 76 DAR HH12 H N N 77 DAR HH21 H N N 78 DAR HH22 H N N 79 DAR HXT H N N 80 DLE N N N N 81 DLE CA C N R 82 DLE CB C N N 83 DLE CG C N N 84 DLE CD1 C N N 85 DLE CD2 C N N 86 DLE C C N N 87 DLE O O N N 88 DLE OXT O N N 89 DLE H H N N 90 DLE H2 H N N 91 DLE HA H N N 92 DLE HB2 H N N 93 DLE HB3 H N N 94 DLE HG H N N 95 DLE HD11 H N N 96 DLE HD12 H N N 97 DLE HD13 H N N 98 DLE HD21 H N N 99 DLE HD22 H N N 100 DLE HD23 H N N 101 DLE HXT H N N 102 DLY N N N N 103 DLY CA C N R 104 DLY C C N N 105 DLY O O N N 106 DLY CB C N N 107 DLY CG C N N 108 DLY CD C N N 109 DLY CE C N N 110 DLY NZ N N N 111 DLY OXT O N N 112 DLY H H N N 113 DLY H2 H N N 114 DLY HA H N N 115 DLY HB2 H N N 116 DLY HB3 H N N 117 DLY HG2 H N N 118 DLY HG3 H N N 119 DLY HD2 H N N 120 DLY HD3 H N N 121 DLY HE2 H N N 122 DLY HE3 H N N 123 DLY HZ1 H N N 124 DLY HZ2 H N N 125 DLY HXT H N N 126 LEU N N N N 127 LEU CA C N S 128 LEU C C N N 129 LEU O O N N 130 LEU CB C N N 131 LEU CG C N N 132 LEU CD1 C N N 133 LEU CD2 C N N 134 LEU OXT O N N 135 LEU H H N N 136 LEU H2 H N N 137 LEU HA H N N 138 LEU HB2 H N N 139 LEU HB3 H N N 140 LEU HG H N N 141 LEU HD11 H N N 142 LEU HD12 H N N 143 LEU HD13 H N N 144 LEU HD21 H N N 145 LEU HD22 H N N 146 LEU HD23 H N N 147 LEU HXT H N N 148 LYS N N N N 149 LYS CA C N S 150 LYS C C N N 151 LYS O O N N 152 LYS CB C N N 153 LYS CG C N N 154 LYS CD C N N 155 LYS CE C N N 156 LYS NZ N N N 157 LYS OXT O N N 158 LYS H H N N 159 LYS H2 H N N 160 LYS HA H N N 161 LYS HB2 H N N 162 LYS HB3 H N N 163 LYS HG2 H N N 164 LYS HG3 H N N 165 LYS HD2 H N N 166 LYS HD3 H N N 167 LYS HE2 H N N 168 LYS HE3 H N N 169 LYS HZ1 H N N 170 LYS HZ2 H N N 171 LYS HZ3 H N N 172 LYS HXT H N N 173 PHE N N N N 174 PHE CA C N S 175 PHE C C N N 176 PHE O O N N 177 PHE CB C N N 178 PHE CG C Y N 179 PHE CD1 C Y N 180 PHE CD2 C Y N 181 PHE CE1 C Y N 182 PHE CE2 C Y N 183 PHE CZ C Y N 184 PHE OXT O N N 185 PHE H H N N 186 PHE H2 H N N 187 PHE HA H N N 188 PHE HB2 H N N 189 PHE HB3 H N N 190 PHE HD1 H N N 191 PHE HD2 H N N 192 PHE HE1 H N N 193 PHE HE2 H N N 194 PHE HZ H N N 195 PHE HXT H N N 196 PRO N N N N 197 PRO CA C N S 198 PRO C C N N 199 PRO O O N N 200 PRO CB C N N 201 PRO CG C N N 202 PRO CD C N N 203 PRO OXT O N N 204 PRO H H N N 205 PRO HA H N N 206 PRO HB2 H N N 207 PRO HB3 H N N 208 PRO HG2 H N N 209 PRO HG3 H N N 210 PRO HD2 H N N 211 PRO HD3 H N N 212 PRO HXT H N N 213 SER N N N N 214 SER CA C N S 215 SER C C N N 216 SER O O N N 217 SER CB C N N 218 SER OG O N N 219 SER OXT O N N 220 SER H H N N 221 SER H2 H N N 222 SER HA H N N 223 SER HB2 H N N 224 SER HB3 H N N 225 SER HG H N N 226 SER HXT H N N 227 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 DAL N CA sing N N 39 DAL N H sing N N 40 DAL N H2 sing N N 41 DAL CA CB sing N N 42 DAL CA C sing N N 43 DAL CA HA sing N N 44 DAL CB HB1 sing N N 45 DAL CB HB2 sing N N 46 DAL CB HB3 sing N N 47 DAL C O doub N N 48 DAL C OXT sing N N 49 DAL OXT HXT sing N N 50 DAR N CA sing N N 51 DAR N H sing N N 52 DAR N H2 sing N N 53 DAR CA CB sing N N 54 DAR CA C sing N N 55 DAR CA HA sing N N 56 DAR CB CG sing N N 57 DAR CB HB2 sing N N 58 DAR CB HB3 sing N N 59 DAR CG CD sing N N 60 DAR CG HG2 sing N N 61 DAR CG HG3 sing N N 62 DAR CD NE sing N N 63 DAR CD HD2 sing N N 64 DAR CD HD3 sing N N 65 DAR NE CZ sing N N 66 DAR NE HE sing N N 67 DAR CZ NH1 sing N N 68 DAR CZ NH2 doub N N 69 DAR NH1 HH11 sing N N 70 DAR NH1 HH12 sing N N 71 DAR NH2 HH21 sing N N 72 DAR NH2 HH22 sing N N 73 DAR C O doub N N 74 DAR C OXT sing N N 75 DAR OXT HXT sing N N 76 DLE N CA sing N N 77 DLE N H sing N N 78 DLE N H2 sing N N 79 DLE CA CB sing N N 80 DLE CA C sing N N 81 DLE CA HA sing N N 82 DLE CB CG sing N N 83 DLE CB HB2 sing N N 84 DLE CB HB3 sing N N 85 DLE CG CD1 sing N N 86 DLE CG CD2 sing N N 87 DLE CG HG sing N N 88 DLE CD1 HD11 sing N N 89 DLE CD1 HD12 sing N N 90 DLE CD1 HD13 sing N N 91 DLE CD2 HD21 sing N N 92 DLE CD2 HD22 sing N N 93 DLE CD2 HD23 sing N N 94 DLE C O doub N N 95 DLE C OXT sing N N 96 DLE OXT HXT sing N N 97 DLY N CA sing N N 98 DLY N H sing N N 99 DLY N H2 sing N N 100 DLY CA C sing N N 101 DLY CA CB sing N N 102 DLY CA HA sing N N 103 DLY C O doub N N 104 DLY C OXT sing N N 105 DLY CB CG sing N N 106 DLY CB HB2 sing N N 107 DLY CB HB3 sing N N 108 DLY CG CD sing N N 109 DLY CG HG2 sing N N 110 DLY CG HG3 sing N N 111 DLY CD CE sing N N 112 DLY CD HD2 sing N N 113 DLY CD HD3 sing N N 114 DLY CE NZ sing N N 115 DLY CE HE2 sing N N 116 DLY CE HE3 sing N N 117 DLY NZ HZ1 sing N N 118 DLY NZ HZ2 sing N N 119 DLY OXT HXT sing N N 120 LEU N CA sing N N 121 LEU N H sing N N 122 LEU N H2 sing N N 123 LEU CA C sing N N 124 LEU CA CB sing N N 125 LEU CA HA sing N N 126 LEU C O doub N N 127 LEU C OXT sing N N 128 LEU CB CG sing N N 129 LEU CB HB2 sing N N 130 LEU CB HB3 sing N N 131 LEU CG CD1 sing N N 132 LEU CG CD2 sing N N 133 LEU CG HG sing N N 134 LEU CD1 HD11 sing N N 135 LEU CD1 HD12 sing N N 136 LEU CD1 HD13 sing N N 137 LEU CD2 HD21 sing N N 138 LEU CD2 HD22 sing N N 139 LEU CD2 HD23 sing N N 140 LEU OXT HXT sing N N 141 LYS N CA sing N N 142 LYS N H sing N N 143 LYS N H2 sing N N 144 LYS CA C sing N N 145 LYS CA CB sing N N 146 LYS CA HA sing N N 147 LYS C O doub N N 148 LYS C OXT sing N N 149 LYS CB CG sing N N 150 LYS CB HB2 sing N N 151 LYS CB HB3 sing N N 152 LYS CG CD sing N N 153 LYS CG HG2 sing N N 154 LYS CG HG3 sing N N 155 LYS CD CE sing N N 156 LYS CD HD2 sing N N 157 LYS CD HD3 sing N N 158 LYS CE NZ sing N N 159 LYS CE HE2 sing N N 160 LYS CE HE3 sing N N 161 LYS NZ HZ1 sing N N 162 LYS NZ HZ2 sing N N 163 LYS NZ HZ3 sing N N 164 LYS OXT HXT sing N N 165 PHE N CA sing N N 166 PHE N H sing N N 167 PHE N H2 sing N N 168 PHE CA C sing N N 169 PHE CA CB sing N N 170 PHE CA HA sing N N 171 PHE C O doub N N 172 PHE C OXT sing N N 173 PHE CB CG sing N N 174 PHE CB HB2 sing N N 175 PHE CB HB3 sing N N 176 PHE CG CD1 doub Y N 177 PHE CG CD2 sing Y N 178 PHE CD1 CE1 sing Y N 179 PHE CD1 HD1 sing N N 180 PHE CD2 CE2 doub Y N 181 PHE CD2 HD2 sing N N 182 PHE CE1 CZ doub Y N 183 PHE CE1 HE1 sing N N 184 PHE CE2 CZ sing Y N 185 PHE CE2 HE2 sing N N 186 PHE CZ HZ sing N N 187 PHE OXT HXT sing N N 188 PRO N CA sing N N 189 PRO N CD sing N N 190 PRO N H sing N N 191 PRO CA C sing N N 192 PRO CA CB sing N N 193 PRO CA HA sing N N 194 PRO C O doub N N 195 PRO C OXT sing N N 196 PRO CB CG sing N N 197 PRO CB HB2 sing N N 198 PRO CB HB3 sing N N 199 PRO CG CD sing N N 200 PRO CG HG2 sing N N 201 PRO CG HG3 sing N N 202 PRO CD HD2 sing N N 203 PRO CD HD3 sing N N 204 PRO OXT HXT sing N N 205 SER N CA sing N N 206 SER N H sing N N 207 SER N H2 sing N N 208 SER CA C sing N N 209 SER CA CB sing N N 210 SER CA HA sing N N 211 SER C O doub N N 212 SER C OXT sing N N 213 SER CB OG sing N N 214 SER CB HB2 sing N N 215 SER CB HB3 sing N N 216 SER OG HG sing N N 217 SER OXT HXT sing N N 218 # _pdbx_audit_support.funding_organization 'Academia Sinica (Taiwan)' _pdbx_audit_support.country Taiwan _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 800 ? 2 AVANCE ? Bruker 800 ? # _atom_sites.entry_id 9IO3 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O # loop_ #