HEADER DE NOVO PROTEIN 31-JUL-24 9IZ6 TITLE DE NOVO DESIGNED CELL-PENETRATING PEPTIDE SELF-ASSEMBLY FEATURING TITLE 2 DISTINCTIVE TERTIARY STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEU-LYS-LYS-LEU-CYS-LYS-LEU-LEU-LYS-LYS-LEU-CYS-LYS-LEU- COMPND 3 ALA-GLY; COMPND 4 CHAIN: A, C, B, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, COMPND 5 V, W, X; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: LKKLCKLLKKLCKLAG SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS CPP, PROTEIN DESIGN, PEPTIDE SELF-ASSEMBLY, AMPHIPATHIC PEPTIDES, KEYWDS 2 CELL-PENETRATION, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.PARK,S.HYUN,S.J.LEE REVDAT 2 06-NOV-24 9IZ6 1 REMARK REVDAT 1 11-SEP-24 9IZ6 0 JRNL AUTH J.PARK,E.YAMASHITA,J.YU,S.J.LEE,S.HYUN JRNL TITL DE NOVO DESIGNED CELL-PENETRATING PEPTIDE SELF-ASSEMBLY JRNL TITL 2 FEATURING DISTINCTIVE TERTIARY STRUCTURE. JRNL REF ACS OMEGA V. 9 32991 2024 JRNL REFN ESSN 2470-1343 JRNL PMID 39100342 JRNL DOI 10.1021/ACSOMEGA.4C04004 REMARK 2 REMARK 2 RESOLUTION. 2.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.2_4158: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 17043 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.313 REMARK 3 R VALUE (WORKING SET) : 0.310 REMARK 3 FREE R VALUE : 0.334 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1800 - 5.5500 0.99 1389 150 0.3146 0.3187 REMARK 3 2 5.5500 - 4.4100 0.99 1306 145 0.3083 0.2911 REMARK 3 3 4.4100 - 3.8600 1.00 1278 139 0.2783 0.3208 REMARK 3 4 3.8500 - 3.5000 0.99 1284 145 0.2943 0.3477 REMARK 3 5 3.5000 - 3.2500 1.00 1288 140 0.3166 0.3158 REMARK 3 6 3.2500 - 3.0600 1.00 1264 144 0.3304 0.3661 REMARK 3 7 3.0600 - 2.9100 0.99 1257 130 0.3294 0.3749 REMARK 3 8 2.9100 - 2.7800 0.99 1264 153 0.3516 0.3984 REMARK 3 9 2.7800 - 2.6700 0.99 1247 124 0.3197 0.3928 REMARK 3 10 2.6700 - 2.5800 1.00 1264 145 0.3143 0.3632 REMARK 3 11 2.5800 - 2.5000 1.00 1230 148 0.3300 0.3348 REMARK 3 12 2.5000 - 2.4300 0.99 1278 131 0.3473 0.4156 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2896 REMARK 3 ANGLE : 1.215 3722 REMARK 3 CHIRALITY : 0.058 504 REMARK 3 PLANARITY : 0.005 346 REMARK 3 DIHEDRAL : 3.873 354 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9IZ6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1300050024. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.26 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17090 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.430 REMARK 200 RESOLUTION RANGE LOW (A) : 29.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60% PEG 400, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.37000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.04000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.78500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.04000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.37000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.78500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, N, O, P, Q, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: S, T, U, V, W, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY F 16 REMARK 465 GLY I 16 REMARK 465 GLY L 16 REMARK 465 GLY O 16 REMARK 465 GLY Q 16 REMARK 465 ALA U 15 REMARK 465 GLY U 16 REMARK 465 GLY W 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS S 3 O REMARK 470 LEU S 4 O REMARK 470 CYS S 5 O REMARK 470 LYS S 10 O REMARK 470 LEU S 11 O REMARK 470 CYS S 12 O REMARK 470 GLY S 16 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS T 6 O HOH T 101 1.41 REMARK 500 CD2 LEU O 11 CD2 LEU R 11 1.53 REMARK 500 O LEU X 7 CD2 LEU X 11 1.73 REMARK 500 NZ LYS G 13 N LEU T 14 1.79 REMARK 500 NZ LYS D 9 O HOH D 101 1.80 REMARK 500 O GLY G 16 NZ LYS T 13 1.81 REMARK 500 NZ LYS G 13 C LYS T 13 1.82 REMARK 500 CD1 LEU M 1 CD2 LEU R 7 1.85 REMARK 500 CD2 LEU J 11 CD1 LEU L 1 1.85 REMARK 500 CD1 LEU R 1 N LEU R 4 1.90 REMARK 500 NZ LYS C 13 O LYS H 13 1.90 REMARK 500 CG LYS U 3 O HOH U 101 1.95 REMARK 500 NZ LYS P 10 O HOH P 101 1.96 REMARK 500 O HOH D 101 O HOH D 104 1.96 REMARK 500 O HOH C 102 O HOH D 106 1.99 REMARK 500 O LYS V 2 CG LYS V 6 1.99 REMARK 500 O HOH H 105 O HOH H 107 2.00 REMARK 500 O LYS L 10 CD1 LEU L 14 2.01 REMARK 500 NZ LYS G 13 O LYS T 13 2.07 REMARK 500 O HOH M 102 O HOH M 103 2.10 REMARK 500 NZ LYS G 13 CA LEU T 14 2.11 REMARK 500 O HOH M 102 O HOH M 104 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS M 6 O LEU O 14 4455 1.35 REMARK 500 NZ LYS D 6 NZ LYS E 2 1655 1.53 REMARK 500 NZ LYS M 6 C LEU O 14 4455 1.82 REMARK 500 O LEU B 14 CE LYS S 2 2455 2.10 REMARK 500 NZ LYS M 6 N ALA O 15 4455 2.16 REMARK 500 NZ LYS M 6 CA ALA O 15 4455 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS I 13 -63.21 -93.37 REMARK 500 LEU L 14 4.32 -55.36 REMARK 500 LEU S 8 8.29 -64.07 REMARK 500 LEU W 14 -74.76 -54.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 102 DISTANCE = 7.64 ANGSTROMS DBREF 9IZ6 A 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 C 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 B 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 D 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 E 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 F 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 G 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 H 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 I 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 J 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 K 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 L 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 M 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 N 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 O 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 P 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 Q 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 R 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 S 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 T 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 U 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 V 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 W 1 16 PDB 9IZ6 9IZ6 1 16 DBREF 9IZ6 X 1 16 PDB 9IZ6 9IZ6 1 16 SEQRES 1 A 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 A 16 LEU ALA GLY SEQRES 1 C 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 C 16 LEU ALA GLY SEQRES 1 B 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 B 16 LEU ALA GLY SEQRES 1 D 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 D 16 LEU ALA GLY SEQRES 1 E 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 E 16 LEU ALA GLY SEQRES 1 F 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 F 16 LEU ALA GLY SEQRES 1 G 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 G 16 LEU ALA GLY SEQRES 1 H 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 H 16 LEU ALA GLY SEQRES 1 I 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 I 16 LEU ALA GLY SEQRES 1 J 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 J 16 LEU ALA GLY SEQRES 1 K 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 K 16 LEU ALA GLY SEQRES 1 L 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 L 16 LEU ALA GLY SEQRES 1 M 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 M 16 LEU ALA GLY SEQRES 1 N 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 N 16 LEU ALA GLY SEQRES 1 O 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 O 16 LEU ALA GLY SEQRES 1 P 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 P 16 LEU ALA GLY SEQRES 1 Q 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 Q 16 LEU ALA GLY SEQRES 1 R 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 R 16 LEU ALA GLY SEQRES 1 S 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 S 16 LEU ALA GLY SEQRES 1 T 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 T 16 LEU ALA GLY SEQRES 1 U 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 U 16 LEU ALA GLY SEQRES 1 V 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 V 16 LEU ALA GLY SEQRES 1 W 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 W 16 LEU ALA GLY SEQRES 1 X 16 LEU LYS LYS LEU CYS LYS LEU LEU LYS LYS LEU CYS LYS SEQRES 2 X 16 LEU ALA GLY HET GOL A 101 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 25 GOL C3 H8 O3 FORMUL 26 HOH *52(H2 O) HELIX 1 AA1 LEU A 1 GLY A 16 1 16 HELIX 2 AA2 LYS C 2 GLY C 16 1 15 HELIX 3 AA3 LYS B 2 GLY B 16 1 15 HELIX 4 AA4 LYS D 2 GLY D 16 1 15 HELIX 5 AA5 LYS E 2 GLY E 16 1 15 HELIX 6 AA6 LYS F 2 LEU F 14 1 13 HELIX 7 AA7 LYS G 2 GLY G 16 1 15 HELIX 8 AA8 LYS H 2 GLY H 16 1 15 HELIX 9 AA9 LYS I 2 CYS I 12 1 11 HELIX 10 AB1 LYS J 2 GLY J 16 1 15 HELIX 11 AB2 LYS K 2 GLY K 16 1 15 HELIX 12 AB3 LYS L 2 LEU L 14 1 13 HELIX 13 AB4 LYS M 2 GLY M 16 1 15 HELIX 14 AB5 LYS N 2 GLY N 16 1 15 HELIX 15 AB6 LYS O 2 LEU O 14 1 13 HELIX 16 AB7 LYS P 2 GLY P 16 1 15 HELIX 17 AB8 LYS Q 2 LEU Q 14 1 13 HELIX 18 AB9 LYS R 2 GLY R 16 1 15 HELIX 19 AC1 LYS T 2 GLY T 16 1 15 HELIX 20 AC2 LYS U 2 LYS U 13 1 12 HELIX 21 AC3 LYS V 2 ALA V 15 1 14 HELIX 22 AC4 LYS W 2 ALA W 15 1 14 HELIX 23 AC5 LYS X 3 GLY X 16 1 14 SSBOND 1 CYS A 5 CYS B 12 1555 1555 2.96 SSBOND 2 CYS E 5 CYS F 12 1555 1555 2.09 SSBOND 3 CYS M 5 CYS O 12 1555 1555 2.99 SSBOND 4 CYS W 12 CYS X 5 1555 1555 2.85 CRYST1 34.740 107.570 116.080 90.00 90.00 90.00 P 21 21 21 96 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028785 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009296 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008615 0.00000 TER 124 GLY A 16 TER 248 GLY C 16 TER 372 GLY B 16 TER 496 GLY D 16 TER 620 GLY E 16 TER 740 ALA F 15 TER 864 GLY G 16 TER 988 GLY H 16 TER 1108 ALA I 15 TER 1232 GLY J 16 TER 1356 GLY K 16 TER 1476 ALA L 15 TER 1600 GLY M 16 TER 1724 GLY N 16 TER 1844 ALA O 15 TER 1968 GLY P 16 TER 2088 ALA Q 15 TER 2212 GLY R 16 TER 2329 GLY S 16 TER 2453 GLY T 16 TER 2568 LEU U 14 TER 2692 GLY V 16 TER 2812 ALA W 15 TER 2936 GLY X 16 HETATM 2937 C1 GOL A 101 -9.085 -0.916 -7.708 1.00 64.75 C HETATM 2938 O1 GOL A 101 -10.019 -1.691 -8.426 1.00 59.38 O HETATM 2939 C2 GOL A 101 -9.345 0.562 -7.756 1.00 56.22 C HETATM 2940 O2 GOL A 101 -10.556 0.838 -7.121 1.00 58.25 O HETATM 2941 C3 GOL A 101 -8.240 1.234 -6.976 1.00 56.74 C HETATM 2942 O3 GOL A 101 -7.406 1.991 -7.824 1.00 66.16 O HETATM 2943 O HOH A 201 -2.265 0.756 -16.027 1.00 64.82 O HETATM 2944 O HOH A 202 -13.695 12.180 -11.866 1.00 78.19 O HETATM 2945 O HOH A 203 -4.973 21.452 -26.832 1.00 36.89 O HETATM 2946 O HOH A 204 -12.910 10.266 -14.880 1.00 62.91 O HETATM 2947 O HOH C 101 2.269 13.783 -37.421 1.00 51.84 O HETATM 2948 O HOH C 102 -1.664 0.731 -32.341 1.00 53.84 O HETATM 2949 O HOH B 101 -22.103 9.671 -31.189 1.00 66.93 O HETATM 2950 O HOH B 102 -23.949 11.376 -31.227 1.00 68.93 O HETATM 2951 O HOH D 101 6.337 2.584 -30.822 1.00 75.31 O HETATM 2952 O HOH D 102 5.597 -0.094 -31.149 1.00 68.02 O HETATM 2953 O HOH D 103 3.711 8.576 -18.431 1.00 58.15 O HETATM 2954 O HOH D 104 7.527 3.586 -29.625 1.00 68.84 O HETATM 2955 O HOH D 105 -0.909 3.773 -29.189 1.00 47.18 O HETATM 2956 O HOH D 106 -2.085 1.734 -30.678 1.00 40.72 O HETATM 2957 O HOH E 101 -23.242 -1.810 -28.082 1.00 59.08 O HETATM 2958 O HOH F 101 -21.235 -3.539 -20.167 1.00 54.02 O HETATM 2959 O HOH G 101 -3.622 8.318 -42.265 1.00 50.69 O HETATM 2960 O HOH G 102 -9.971 13.013 -56.117 1.00 51.40 O HETATM 2961 O HOH H 101 -12.159 28.797 -33.366 1.00 62.54 O HETATM 2962 O HOH H 102 -2.798 17.543 -30.118 1.00 48.02 O HETATM 2963 O HOH H 103 -3.303 9.090 -37.512 1.00 56.18 O HETATM 2964 O HOH H 104 -12.883 33.695 -31.317 1.00 52.87 O HETATM 2965 O HOH H 105 -2.709 25.313 -36.606 1.00 40.13 O HETATM 2966 O HOH H 106 -10.857 32.594 -29.364 1.00 63.14 O HETATM 2967 O HOH H 107 -2.071 23.978 -37.958 1.00 44.15 O HETATM 2968 O HOH H 108 2.870 15.704 -39.365 1.00 56.74 O HETATM 2969 O HOH I 101 -14.530 18.489 -47.197 1.00 66.59 O HETATM 2970 O HOH J 101 1.636 38.022 -35.000 1.00 56.41 O HETATM 2971 O HOH J 102 2.552 11.984 -43.829 1.00 54.09 O HETATM 2972 O HOH J 103 1.112 14.045 -44.569 1.00 51.95 O HETATM 2973 O HOH J 104 6.350 15.705 -41.398 1.00 61.01 O HETATM 2974 O HOH J 105 0.903 16.074 -42.660 1.00 42.19 O HETATM 2975 O HOH J 106 2.166 16.956 -41.027 1.00 44.59 O HETATM 2976 O HOH L 101 -23.960 32.606 -51.678 1.00 62.59 O HETATM 2977 O HOH M 101 -8.037 18.082 -11.536 1.00 57.65 O HETATM 2978 O HOH M 102 0.383 15.327 -13.516 1.00 44.17 O HETATM 2979 O HOH M 103 -0.579 13.745 -14.510 1.00 56.40 O HETATM 2980 O HOH M 104 1.370 15.035 -11.630 1.00 60.65 O HETATM 2981 O HOH O 101 6.952 11.508 -16.276 1.00 54.06 O HETATM 2982 O HOH P 101 2.504 40.482 -24.176 1.00 61.72 O HETATM 2983 O HOH P 102 -3.493 26.306 -10.378 1.00 69.80 O HETATM 2984 O HOH P 103 -1.754 33.458 -22.810 1.00 60.02 O HETATM 2985 O HOH Q 101 14.220 19.759 -17.946 1.00 62.50 O HETATM 2986 O HOH S 101 9.797 -6.520 -62.689 1.00 69.11 O HETATM 2987 O HOH T 101 -0.044 7.655 -38.150 1.00 38.39 O HETATM 2988 O HOH T 102 2.797 0.707 -42.407 1.00 55.78 O HETATM 2989 O HOH T 103 1.905 -0.098 -45.430 1.00 58.89 O HETATM 2990 O HOH U 101 7.041 11.623 -49.742 1.00 59.57 O HETATM 2991 O HOH U 102 15.231 5.835 -60.318 1.00 79.78 O HETATM 2992 O HOH U 103 17.275 3.511 -67.858 1.00 70.20 O HETATM 2993 O HOH W 101 13.062 -12.010 -42.647 1.00 71.18 O HETATM 2994 O HOH X 101 14.137 -0.210 -55.504 1.00 78.16 O CONECT 40 345 CONECT 345 40 CONECT 536 717 CONECT 717 536 CONECT 1516 1821 CONECT 1821 1516 CONECT 2789 2852 CONECT 2852 2789 CONECT 2937 2938 2939 CONECT 2938 2937 CONECT 2939 2937 2940 2941 CONECT 2940 2939 CONECT 2941 2939 2942 CONECT 2942 2941 MASTER 356 0 1 23 0 0 0 6 2970 24 14 48 END