HEADER PROTEIN BINDING/IMMUNE SYSTEM 09-AUG-24 9J4C TITLE CRYO-EM STRUCTURE OF APLEXINA1-19-43 FAB IN COMPLEX WITH PLEXINA1 TITLE 2 DIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLEXIN-A1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SEMAPHORIN RECEPTOR NOV; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: HUMAN PLEXIN A1 27 TO 710 WITH HIS TAG; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: LIGHT CHAIN OF APLEXINA1-19-43 FAB; COMPND 9 CHAIN: L; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: HEAVY CHAIN OF APLEXINA1-19-43 FAB; COMPND 13 CHAIN: H; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLXNA1, NOV, PLXN1; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 17 ORGANISM_TAXID: 10090; SOURCE 18 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: CHO KEYWDS SIGNALLING, FAB, COMPLEX, PROTEIN BINDING, PROTEIN BINDING-IMMUNE KEYWDS 2 SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR H.TIAN,C.P.FUNG REVDAT 1 21-JAN-26 9J4C 0 JRNL AUTH H.TIAN,C.P.FUNG,L.BURMAN,Y.E.CHONG,C.LIU,Y.GENG,L.YANG, JRNL AUTH 2 M.W.CHOW,Y.ZHANG,K.W.H.HO,G.ZHU,Z.WU,X.L.YANG,Z.XU, JRNL AUTH 3 L.A.NANGLE JRNL TITL A BISPECIFIC ANTIBODY DESIGNED TO ACT AS A NRP2/PLXNA1 JRNL TITL 2 AGONIST MIMICS ANTICANCER ACTIVITY OF SEMA3F. JRNL REF J.BIOL.CHEM. V. 302 11056 2025 JRNL REFN ESSN 1083-351X JRNL PMID 41391772 JRNL DOI 10.1016/J.JBC.2025.111056 REMARK 2 REMARK 2 RESOLUTION. 3.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, UCSF CHIMERAX, REMARK 3 COOT, CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 5L59 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : AB INITIO MODEL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : INITIAL LOCAL FITTING WAS DONE USING CHIMERA REMARK 3 X, FOLLOWED BY MANUAL FITTING USING COOT. FINALLY IT WAS REFINED REMARK 3 USING PHENIX REAL SPACE REFINEMENT REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.330 REMARK 3 NUMBER OF PARTICLES : 253734 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9J4C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1300050167. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DIMER COMPLEX OF HUMAN PLEXIN REMARK 245 -A1 27-710 WITH APLEXINA1-19-43 REMARK 245 FAB BINDING; DIMER OF HUMAN REMARK 245 PLEXIN-A1 27-710; APLEXINA1-19- REMARK 245 43 FAB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.10 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : TO PREPARE CRYO-GRIDS, 3 UL REMARK 245 SAMPLES WERE APPLIED TO GLOW REMARK 245 DISCHARGED QUANTIFOIL AU GRIDS REMARK 245 (R2/2, 300 MESH), WHICH WERE REMARK 245 SUBSEQUENTLY BLOTTED WITH REMARK 245 FILTER PAPER (TED PELLA) FOR 3 REMARK 245 SECONDS AT 18OC AND 100% REMARK 245 HUMIDITY. THE GRIDS WERE REMARK 245 IMMEDIATELY PLUNGE FROZEN IN REMARK 245 LIQUID ETHANE USING A FEI REMARK 245 VITROBOT IV (THERMOFISHER) REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : FAB FRAGMENTS GENERATED FROM REMARK 245 CLONING THE VARIABLE REGION OF PLEXINA1 ANTIBODY GENERATED FROM REMARK 245 MOUSE, INTO FAB VECTOR. FAB FRAGMENTS AND PLEXINA1 27-710 ARE REMARK 245 EXPRESSED AND PURIFIED FROM CHO CELLS.; HEAVY CHAIN AND LIGHT REMARK 245 CHAIN OF APLEXINA1-19-43 FAB EXPRESSED AND PURIFIED FROM CHO REMARK 245 CELLS REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 1989 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : OTHER REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : OTHER REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 CYCLIC POINT SYMMETRY (SCHOENFLIES SYMBOL = C2). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.999975 -0.007031 0.000028 295.57754 REMARK 350 BIOMT2 2 -0.007031 0.999943 -0.007984 2.13197 REMARK 350 BIOMT3 2 0.000028 -0.007984 -0.999968 273.72559 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 LEU A 30 REMARK 465 PRO A 31 REMARK 465 ARG A 32 REMARK 465 ALA A 33 REMARK 465 GLY A 34 REMARK 465 VAL A 690 REMARK 465 ALA A 691 REMARK 465 ASP A 692 REMARK 465 CYS A 693 REMARK 465 ALA A 694 REMARK 465 PHE A 695 REMARK 465 LEU A 696 REMARK 465 GLU A 697 REMARK 465 GLY A 698 REMARK 465 ARG A 699 REMARK 465 VAL A 700 REMARK 465 ASN A 701 REMARK 465 VAL A 702 REMARK 465 SER A 703 REMARK 465 GLU A 704 REMARK 465 ASP A 705 REMARK 465 CYS A 706 REMARK 465 PRO A 707 REMARK 465 GLN A 708 REMARK 465 ILE A 709 REMARK 465 LEU A 710 REMARK 465 HIS A 711 REMARK 465 HIS A 712 REMARK 465 HIS A 713 REMARK 465 HIS A 714 REMARK 465 HIS A 715 REMARK 465 HIS A 716 REMARK 465 HIS H 228 REMARK 465 HIS H 229 REMARK 465 HIS H 230 REMARK 465 HIS H 231 REMARK 465 HIS H 232 REMARK 465 HIS H 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 38 74.59 52.70 REMARK 500 ASN A 69 -5.87 71.01 REMARK 500 LEU A 160 -61.83 -91.48 REMARK 500 VAL A 247 -50.21 -126.37 REMARK 500 GLN A 254 8.03 58.66 REMARK 500 PHE A 292 62.89 60.55 REMARK 500 PHE A 338 58.97 -97.47 REMARK 500 CYS A 532 57.12 -94.60 REMARK 500 SER A 542 -168.75 -127.16 REMARK 500 ARG A 549 15.81 58.25 REMARK 500 GLN A 554 -1.47 67.11 REMARK 500 THR L 50 -6.25 67.80 REMARK 500 PRO L 140 -155.48 -89.65 REMARK 500 THR L 179 34.79 -96.94 REMARK 500 ALA H 134 85.06 -160.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-61131 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF APLEXINA1-19-43 FAB IN COMPLEX WITH PLEXINA1 REMARK 900 DIMER DBREF 9J4C A 27 710 UNP Q9UIW2 PLXA1_HUMAN 27 710 DBREF 9J4C L 1 213 PDB 9J4C 9J4C 1 213 DBREF 9J4C H 1 233 PDB 9J4C 9J4C 1 233 SEQADV 9J4C HIS A 711 UNP Q9UIW2 EXPRESSION TAG SEQADV 9J4C HIS A 712 UNP Q9UIW2 EXPRESSION TAG SEQADV 9J4C HIS A 713 UNP Q9UIW2 EXPRESSION TAG SEQADV 9J4C HIS A 714 UNP Q9UIW2 EXPRESSION TAG SEQADV 9J4C HIS A 715 UNP Q9UIW2 EXPRESSION TAG SEQADV 9J4C HIS A 716 UNP Q9UIW2 EXPRESSION TAG SEQRES 1 A 690 GLU ALA GLY LEU PRO ARG ALA GLY GLY GLY SER GLN PRO SEQRES 2 A 690 PRO PHE ARG THR PHE SER ALA SER ASP TRP GLY LEU THR SEQRES 3 A 690 HIS LEU VAL VAL HIS GLU GLN THR GLY GLU VAL TYR VAL SEQRES 4 A 690 GLY ALA VAL ASN ARG ILE TYR LYS LEU SER GLY ASN LEU SEQRES 5 A 690 THR LEU LEU ARG ALA HIS VAL THR GLY PRO VAL GLU ASP SEQRES 6 A 690 ASN GLU LYS CYS TYR PRO PRO PRO SER VAL GLN SER CYS SEQRES 7 A 690 PRO HIS GLY LEU GLY SER THR ASP ASN VAL ASN LYS LEU SEQRES 8 A 690 LEU LEU LEU ASP TYR ALA ALA ASN ARG LEU LEU ALA CYS SEQRES 9 A 690 GLY SER ALA SER GLN GLY ILE CYS GLN PHE LEU ARG LEU SEQRES 10 A 690 ASP ASP LEU PHE LYS LEU GLY GLU PRO HIS HIS ARG LYS SEQRES 11 A 690 GLU HIS TYR LEU SER SER VAL GLN GLU ALA GLY SER MET SEQRES 12 A 690 ALA GLY VAL LEU ILE ALA GLY PRO PRO GLY GLN GLY GLN SEQRES 13 A 690 ALA LYS LEU PHE VAL GLY THR PRO ILE ASP GLY LYS SER SEQRES 14 A 690 GLU TYR PHE PRO THR LEU SER SER ARG ARG LEU MET ALA SEQRES 15 A 690 ASN GLU GLU ASP ALA ASP MET PHE GLY PHE VAL TYR GLN SEQRES 16 A 690 ASP GLU PHE VAL SER SER GLN LEU LYS ILE PRO SER ASP SEQRES 17 A 690 THR LEU SER LYS PHE PRO ALA PHE ASP ILE TYR TYR VAL SEQRES 18 A 690 TYR SER PHE ARG SER GLU GLN PHE VAL TYR TYR LEU THR SEQRES 19 A 690 LEU GLN LEU ASP THR GLN LEU THR SER PRO ASP ALA ALA SEQRES 20 A 690 GLY GLU HIS PHE PHE THR SER LYS ILE VAL ARG LEU CYS SEQRES 21 A 690 VAL ASP ASP PRO LYS PHE TYR SER TYR VAL GLU PHE PRO SEQRES 22 A 690 ILE GLY CYS GLU GLN ALA GLY VAL GLU TYR ARG LEU VAL SEQRES 23 A 690 GLN ASP ALA TYR LEU SER ARG PRO GLY ARG ALA LEU ALA SEQRES 24 A 690 HIS GLN LEU GLY LEU ALA GLU ASP GLU ASP VAL LEU PHE SEQRES 25 A 690 THR VAL PHE ALA GLN GLY GLN LYS ASN ARG VAL LYS PRO SEQRES 26 A 690 PRO LYS GLU SER ALA LEU CYS LEU PHE THR LEU ARG ALA SEQRES 27 A 690 ILE LYS GLU LYS ILE LYS GLU ARG ILE GLN SER CYS TYR SEQRES 28 A 690 ARG GLY GLU GLY LYS LEU SER LEU PRO TRP LEU LEU ASN SEQRES 29 A 690 LYS GLU LEU GLY CYS ILE ASN SER PRO LEU GLN ILE ASP SEQRES 30 A 690 ASP ASP PHE CYS GLY GLN ASP PHE ASN GLN PRO LEU GLY SEQRES 31 A 690 GLY THR VAL THR ILE GLU GLY THR PRO LEU PHE VAL ASP SEQRES 32 A 690 LYS ASP ASP GLY LEU THR ALA VAL ALA ALA TYR ASP TYR SEQRES 33 A 690 ARG GLY ARG THR VAL VAL PHE ALA GLY THR ARG SER GLY SEQRES 34 A 690 ARG ILE ARG LYS ILE LEU VAL ASP LEU SER ASN PRO GLY SEQRES 35 A 690 GLY ARG PRO ALA LEU ALA TYR GLU SER VAL VAL ALA GLN SEQRES 36 A 690 GLU GLY SER PRO ILE LEU ARG ASP LEU VAL LEU SER PRO SEQRES 37 A 690 ASN HIS GLN TYR LEU TYR ALA MET THR GLU LYS GLN VAL SEQRES 38 A 690 THR ARG VAL PRO VAL GLU SER CYS VAL GLN TYR THR SER SEQRES 39 A 690 CYS GLU LEU CYS LEU GLY SER ARG ASP PRO HIS CYS GLY SEQRES 40 A 690 TRP CYS VAL LEU HIS SER ILE CYS SER ARG ARG ASP ALA SEQRES 41 A 690 CYS GLU ARG ALA ASP GLU PRO GLN ARG PHE ALA ALA ASP SEQRES 42 A 690 LEU LEU GLN CYS VAL GLN LEU THR VAL GLN PRO ARG ASN SEQRES 43 A 690 VAL SER VAL THR MET SER GLN VAL PRO LEU VAL LEU GLN SEQRES 44 A 690 ALA TRP ASN VAL PRO ASP LEU SER ALA GLY VAL ASN CYS SEQRES 45 A 690 SER PHE GLU ASP PHE THR GLU SER GLU SER VAL LEU GLU SEQRES 46 A 690 ASP GLY ARG ILE HIS CYS ARG SER PRO SER ALA ARG GLU SEQRES 47 A 690 VAL ALA PRO ILE THR ARG GLY GLN GLY ASP GLN ARG VAL SEQRES 48 A 690 VAL LYS LEU TYR LEU LYS SER LYS GLU THR GLY LYS LYS SEQRES 49 A 690 PHE ALA SER VAL ASP PHE VAL PHE TYR ASN CYS SER VAL SEQRES 50 A 690 HIS GLN SER CYS LEU SER CYS VAL ASN GLY SER PHE PRO SEQRES 51 A 690 CYS HIS TRP CYS LYS TYR ARG HIS VAL CYS THR HIS ASN SEQRES 52 A 690 VAL ALA ASP CYS ALA PHE LEU GLU GLY ARG VAL ASN VAL SEQRES 53 A 690 SER GLU ASP CYS PRO GLN ILE LEU HIS HIS HIS HIS HIS SEQRES 54 A 690 HIS SEQRES 1 L 213 GLN ILE VAL LEU THR GLN SER PRO ALA ILE LEU SER ALA SEQRES 2 L 213 SER PRO GLY GLU LYS VAL THR MET SER CYS SER VAL SER SEQRES 3 L 213 SER SER ILE THR TYR MET HIS TRP TYR GLN GLN LYS PRO SEQRES 4 L 213 GLY THR SER PRO LYS ARG TRP ILE TYR ASP THR SER LYS SEQRES 5 L 213 LEU ALA SER GLY VAL PRO ALA ARG PHE SER GLY SER GLY SEQRES 6 L 213 SER GLY THR SER PHE SER LEU THR ILE SER ASN MET GLU SEQRES 7 L 213 ALA GLU ASP ALA ALA THR TYR TYR CYS HIS GLN ARG SER SEQRES 8 L 213 SER TYR PRO TYR SER PHE GLY GLY GLY THR LYS LEU GLU SEQRES 9 L 213 ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE PHE SEQRES 10 L 213 PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SER SEQRES 11 L 213 VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP ILE SEQRES 12 L 213 ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN ASN SEQRES 13 L 213 GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS ASP SEQRES 14 L 213 SER THR TYR SER MET SER SER THR LEU THR LEU THR LYS SEQRES 15 L 213 ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU ALA SEQRES 16 L 213 THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER PHE SEQRES 17 L 213 ASN ARG ASN GLU CYS SEQRES 1 H 233 GLU VAL GLN LEU GLN GLN SER GLY PRO GLU LEU VAL LYS SEQRES 2 H 233 PRO GLY ALA SER VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 233 TYR LYS PHE THR GLU ASN TYR MET ASP TRP VAL LYS GLN SEQRES 4 H 233 SER HIS GLY GLU SER LEU GLU TRP ILE GLY ASP ILE SER SEQRES 5 H 233 PRO ASP ASN GLY ASP THR SER TYR ASN GLN LYS PHE ARG SEQRES 6 H 233 ASP LYS ALA THR LEU THR VAL ASP LYS SER SER SER THR SEQRES 7 H 233 ALA TYR MET GLU LEU ARG SER LEU THR SER GLU ASP SER SEQRES 8 H 233 ALA VAL TYR TYR CYS ALA GLN ILE ILE TYR TYR ASP TYR SEQRES 9 H 233 VAL GLY TYR ALA LEU ASP TYR TRP GLY GLN GLY THR SER SEQRES 10 H 233 VAL THR VAL SER SER ALA LYS THR THR PRO PRO SER VAL SEQRES 11 H 233 TYR PRO LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER SEQRES 12 H 233 MET VAL THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO SEQRES 13 H 233 GLU PRO VAL THR VAL THR TRP ASN SER GLY SER LEU SER SEQRES 14 H 233 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP SEQRES 15 H 233 LEU TYR THR LEU SER SER SER VAL THR VAL PRO SER SER SEQRES 16 H 233 THR TRP PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS SEQRES 17 H 233 PRO ALA SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO SEQRES 18 H 233 ARG ASP CYS GLY GLY SER HIS HIS HIS HIS HIS HIS HELIX 1 AA1 SER A 132 ILE A 137 1 6 HELIX 2 AA2 PRO A 232 PHE A 239 1 8 HELIX 3 AA3 GLY A 321 LEU A 328 1 8 HELIX 4 AA4 LEU A 362 GLY A 379 1 18 HELIX 5 AA5 SER A 520 LEU A 525 1 6 HELIX 6 AA6 GLY A 526 ARG A 528 5 3 HELIX 7 AA7 SER A 621 ALA A 626 1 6 HELIX 8 AA8 SER A 666 ASN A 672 1 7 HELIX 9 AA9 GLU L 78 ALA L 83 5 6 HELIX 10 AB1 SER L 120 GLY L 127 1 8 HELIX 11 AB2 THR H 87 SER H 91 5 5 HELIX 12 AB3 GLY H 136 ASN H 142 1 7 HELIX 13 AB4 SER H 165 SER H 167 5 3 SHEET 1 AA1 4 THR A 43 SER A 45 0 SHEET 2 AA1 4 GLN A 506 PRO A 511 -1 O VAL A 507 N PHE A 44 SHEET 3 AA1 4 TYR A 498 MET A 502 -1 N LEU A 499 O VAL A 510 SHEET 4 AA1 4 VAL A 491 LEU A 492 -1 N VAL A 491 O TYR A 500 SHEET 1 AA2 3 LEU A 51 VAL A 56 0 SHEET 2 AA2 3 VAL A 63 ALA A 67 -1 O GLY A 66 N HIS A 53 SHEET 3 AA2 3 ARG A 70 ILE A 71 -1 O ARG A 70 N ALA A 67 SHEET 1 AA3 2 VAL A 89 ASP A 91 0 SHEET 2 AA3 2 GLY A 109 THR A 111 -1 O GLY A 109 N ASP A 91 SHEET 1 AA4 4 LEU A 117 ASP A 121 0 SHEET 2 AA4 4 ARG A 126 CYS A 130 -1 O CYS A 130 N LEU A 117 SHEET 3 AA4 4 PHE A 140 ARG A 142 -1 O LEU A 141 N LEU A 127 SHEET 4 AA4 4 LYS A 148 GLY A 150 -1 O LEU A 149 N PHE A 140 SHEET 1 AA5 3 VAL A 172 LEU A 173 0 SHEET 2 AA5 3 LEU A 185 GLY A 188 -1 O PHE A 186 N VAL A 172 SHEET 3 AA5 3 LEU A 201 ARG A 204 -1 O ARG A 204 N LEU A 185 SHEET 1 AA6 8 SER A 249 SER A 252 0 SHEET 2 AA6 8 PHE A 255 LEU A 263 -1 O PHE A 255 N SER A 252 SHEET 3 AA6 8 PHE A 278 CYS A 286 -1 O LYS A 281 N THR A 260 SHEET 4 AA6 8 VAL A 296 GLN A 304 -1 O PHE A 298 N ILE A 282 SHEET 5 AA6 8 VAL A 307 ASP A 314 -1 O TYR A 309 N CYS A 302 SHEET 6 AA6 8 VAL A 340 GLN A 343 -1 O VAL A 340 N ASP A 314 SHEET 7 AA6 8 SER A 355 THR A 361 -1 O ALA A 356 N PHE A 341 SHEET 8 AA6 8 ILE A 421 GLU A 422 0 SHEET 1 AA7 7 LEU A 317 SER A 318 0 SHEET 2 AA7 7 VAL A 336 LEU A 337 -1 O VAL A 336 N SER A 318 SHEET 3 AA7 7 SER A 355 THR A 361 -1 O PHE A 360 N LEU A 337 SHEET 4 AA7 7 VAL A 340 GLN A 343 -1 N PHE A 341 O ALA A 356 SHEET 5 AA7 7 VAL A 307 ASP A 314 -1 N ASP A 314 O VAL A 340 SHEET 6 AA7 7 VAL A 296 GLN A 304 -1 N CYS A 302 O TYR A 309 SHEET 7 AA7 7 THR A 424 PHE A 427 0 SHEET 1 AA8 4 LEU A 434 TYR A 440 0 SHEET 2 AA8 4 VAL A 447 THR A 452 -1 O PHE A 449 N ALA A 438 SHEET 3 AA8 4 ARG A 456 LEU A 461 -1 O ARG A 458 N ALA A 450 SHEET 4 AA8 4 LEU A 473 VAL A 479 -1 O VAL A 478 N ILE A 457 SHEET 1 AA9 2 TRP A 534 CYS A 535 0 SHEET 2 AA9 2 PHE A 556 ALA A 557 -1 O ALA A 557 N TRP A 534 SHEET 1 AB1 3 LEU A 584 GLN A 585 0 SHEET 2 AB1 3 ARG A 614 HIS A 616 -1 O ILE A 615 N LEU A 584 SHEET 3 AB1 3 VAL A 609 GLU A 611 -1 N VAL A 609 O HIS A 616 SHEET 1 AB2 3 VAL A 596 CYS A 598 0 SHEET 2 AB2 3 VAL A 637 SER A 644 -1 O LYS A 643 N ASN A 597 SHEET 3 AB2 3 ALA A 652 VAL A 657 -1 O VAL A 654 N LEU A 640 SHEET 1 AB3 2 HIS A 678 CYS A 680 0 SHEET 2 AB3 2 VAL A 685 THR A 687 -1 O THR A 687 N HIS A 678 SHEET 1 AB4 4 LEU L 4 SER L 7 0 SHEET 2 AB4 4 VAL L 19 VAL L 25 -1 O SER L 24 N THR L 5 SHEET 3 AB4 4 SER L 69 ILE L 74 -1 O LEU L 72 N MET L 21 SHEET 4 AB4 4 PHE L 61 SER L 64 -1 N SER L 62 O THR L 73 SHEET 1 AB5 2 ILE L 10 ALA L 13 0 SHEET 2 AB5 2 LYS L 102 ILE L 105 1 O GLU L 104 N LEU L 11 SHEET 1 AB6 5 LYS L 52 LEU L 53 0 SHEET 2 AB6 5 LYS L 44 TYR L 48 -1 N TYR L 48 O LYS L 52 SHEET 3 AB6 5 MET L 32 GLN L 37 -1 N TRP L 34 O TRP L 46 SHEET 4 AB6 5 THR L 84 GLN L 89 -1 O TYR L 86 N TYR L 35 SHEET 5 AB6 5 SER L 96 PHE L 97 -1 O SER L 96 N GLN L 89 SHEET 1 AB7 4 SER L 115 PHE L 117 0 SHEET 2 AB7 4 VAL L 131 ASN L 136 -1 O PHE L 134 N SER L 115 SHEET 3 AB7 4 SER L 173 LEU L 178 -1 O MET L 174 N LEU L 135 SHEET 4 AB7 4 VAL L 158 LEU L 159 -1 N LEU L 159 O THR L 177 SHEET 1 AB8 4 SER L 152 GLU L 153 0 SHEET 2 AB8 4 VAL L 145 ILE L 149 -1 N ILE L 149 O SER L 152 SHEET 3 AB8 4 SER L 190 HIS L 197 -1 O GLU L 194 N LYS L 146 SHEET 4 AB8 4 SER L 200 VAL L 205 -1 O ILE L 204 N ALA L 195 SHEET 1 AB9 4 SER L 152 GLU L 153 0 SHEET 2 AB9 4 VAL L 145 ILE L 149 -1 N ILE L 149 O SER L 152 SHEET 3 AB9 4 SER L 190 HIS L 197 -1 O GLU L 194 N LYS L 146 SHEET 4 AB9 4 PHE L 208 ASN L 209 -1 O PHE L 208 N TYR L 191 SHEET 1 AC1 4 GLN H 5 GLN H 6 0 SHEET 2 AC1 4 CYS H 22 LYS H 23 -1 O LYS H 23 N GLN H 5 SHEET 3 AC1 4 THR H 78 ARG H 84 -1 O ALA H 79 N CYS H 22 SHEET 4 AC1 4 SER H 17 LYS H 19 -1 N VAL H 18 O LEU H 83 SHEET 1 AC2 4 GLN H 5 GLN H 6 0 SHEET 2 AC2 4 CYS H 22 LYS H 23 -1 O LYS H 23 N GLN H 5 SHEET 3 AC2 4 THR H 78 ARG H 84 -1 O ALA H 79 N CYS H 22 SHEET 4 AC2 4 LEU H 70 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 AC3 4 LEU H 45 ASP H 50 0 SHEET 2 AC3 4 ASP H 35 GLN H 39 -1 N LYS H 38 O GLU H 46 SHEET 3 AC3 4 ALA H 92 ILE H 99 -1 O ALA H 97 N ASP H 35 SHEET 4 AC3 4 ASP H 110 TRP H 112 -1 O TYR H 111 N GLN H 98 SHEET 1 AC4 4 LEU H 45 ASP H 50 0 SHEET 2 AC4 4 ASP H 35 GLN H 39 -1 N LYS H 38 O GLU H 46 SHEET 3 AC4 4 ALA H 92 ILE H 99 -1 O ALA H 97 N ASP H 35 SHEET 4 AC4 4 SER H 117 VAL H 118 -1 O VAL H 118 N ALA H 92 SHEET 1 AC5 3 VAL H 145 TYR H 154 0 SHEET 2 AC5 3 LEU H 183 VAL H 192 -1 O LEU H 186 N VAL H 151 SHEET 3 AC5 3 VAL H 172 HIS H 173 -1 N HIS H 173 O SER H 189 SHEET 1 AC6 3 VAL H 145 TYR H 154 0 SHEET 2 AC6 3 LEU H 183 VAL H 192 -1 O LEU H 186 N VAL H 151 SHEET 3 AC6 3 VAL H 178 GLN H 180 -1 N GLN H 180 O LEU H 183 SHEET 1 AC7 3 THR H 160 TRP H 163 0 SHEET 2 AC7 3 CYS H 204 HIS H 208 -1 O ALA H 207 N THR H 160 SHEET 3 AC7 3 THR H 213 VAL H 215 -1 O VAL H 215 N VAL H 206 SSBOND 1 CYS A 95 CYS A 104 1555 1555 2.03 SSBOND 2 CYS A 130 CYS A 138 1555 1555 2.03 SSBOND 3 CYS A 286 CYS A 407 1555 1555 2.03 SSBOND 4 CYS A 302 CYS A 358 1555 1555 2.03 SSBOND 5 CYS A 376 CYS A 395 1555 1555 2.03 SSBOND 6 CYS A 515 CYS A 532 1555 1555 2.03 SSBOND 7 CYS A 521 CYS A 563 1555 1555 2.03 SSBOND 8 CYS A 524 CYS A 541 1555 1555 2.03 SSBOND 9 CYS A 535 CYS A 547 1555 1555 2.03 SSBOND 10 CYS A 598 CYS A 617 1555 1555 2.03 SSBOND 11 CYS A 661 CYS A 677 1555 1555 2.03 SSBOND 12 CYS A 670 CYS A 686 1555 1555 2.03 SSBOND 13 CYS L 23 CYS L 87 1555 1555 2.03 SSBOND 14 CYS L 133 CYS L 193 1555 1555 2.03 SSBOND 15 CYS L 213 CYS H 224 1555 1555 2.03 SSBOND 16 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 17 CYS H 149 CYS H 204 1555 1555 2.03 CISPEP 1 TYR A 96 PRO A 97 0 3.36 CISPEP 2 GLN A 413 PRO A 414 0 -1.19 CISPEP 3 GLN A 569 PRO A 570 0 -0.09 CISPEP 4 SER L 7 PRO L 8 0 -4.88 CISPEP 5 TYR L 93 PRO L 94 0 -4.81 CISPEP 6 TYR L 139 PRO L 140 0 -3.07 CISPEP 7 TRP H 197 PRO H 198 0 -3.19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 5118 ASN A 689 TER 6762 CYS L 213 TER 8482 SER H 227 CONECT 469 536 CONECT 536 469 CONECT 730 778 CONECT 778 730 CONECT 1964 2931 CONECT 2096 2533 CONECT 2533 2096 CONECT 2684 2836 CONECT 2836 2684 CONECT 2931 1964 CONECT 3754 3884 CONECT 3801 4129 CONECT 3824 3953 CONECT 3884 3754 CONECT 3908 4000 CONECT 3953 3824 CONECT 4000 3908 CONECT 4129 3801 CONECT 4391 4544 CONECT 4544 4391 CONECT 4894 5007 CONECT 4958 5092 CONECT 5007 4894 CONECT 5092 4958 CONECT 5280 5771 CONECT 5771 5280 CONECT 6107 6604 CONECT 6604 6107 CONECT 6760 8467 CONECT 6921 7514 CONECT 7514 6921 CONECT 7905 8317 CONECT 8317 7905 CONECT 8467 6760 MASTER 205 0 0 13 93 0 0 6 8479 3 34 89 END