HEADER CYTOSOLIC PROTEIN 09-AUG-24 9J4D TITLE CRYO-EM STRUCTURE OF P25ALPHA CORE FIBRIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUBULIN POLYMERIZATION-PROMOTING PROTEIN; COMPND 3 CHAIN: F, C, D, E, A, B; COMPND 4 SYNONYM: TPPP,25 KDA BRAIN-SPECIFIC PROTEIN,TPPP/P25,P24,P25-ALPHA; COMPND 5 EC: 3.6.5.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TPPP, TPPP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN FIBRIL, AMYLOID, CYTOSOLIC PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR W.C.XIA,Y.P.SUN,C.A.HUANG,C.LIU REVDAT 1 13-AUG-25 9J4D 0 JRNL AUTH W.C.XIA,Y.P.SUN,C.A.HUANG,C.LIU JRNL TITL CRYO-EM STRUCTURE OF P25ALPHA CORE FIBRIL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.930 REMARK 3 NUMBER OF PARTICLES : 139740 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9J4D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1300050309. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : CRYO-EM STRUCTURE OF P25ALPHA REMARK 245 CORE FIBRIL REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, C, D, E, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA F 44 REMARK 465 SER F 45 REMARK 465 PRO F 46 REMARK 465 GLU F 47 REMARK 465 LEU F 48 REMARK 465 SER F 49 REMARK 465 ALA F 50 REMARK 465 LEU F 51 REMARK 465 GLU F 52 REMARK 465 GLU F 53 REMARK 465 ALA F 54 REMARK 465 PHE F 55 REMARK 465 ARG F 56 REMARK 465 ARG F 57 REMARK 465 PHE F 58 REMARK 465 ALA F 59 REMARK 465 VAL F 60 REMARK 465 HIS F 61 REMARK 465 GLY F 62 REMARK 465 ASP F 63 REMARK 465 ALA F 64 REMARK 465 ARG F 65 REMARK 465 ALA F 66 REMARK 465 THR F 67 REMARK 465 GLY F 68 REMARK 465 ARG F 69 REMARK 465 GLY F 105 REMARK 465 LYS F 106 REMARK 465 SER F 107 REMARK 465 CYS F 108 REMARK 465 ARG F 109 REMARK 465 THR F 110 REMARK 465 ILE F 111 REMARK 465 THR F 112 REMARK 465 PHE F 113 REMARK 465 GLU F 114 REMARK 465 GLN F 115 REMARK 465 PHE F 116 REMARK 465 GLN F 117 REMARK 465 GLU F 118 REMARK 465 ALA F 119 REMARK 465 LEU F 120 REMARK 465 GLU F 121 REMARK 465 GLU F 122 REMARK 465 LEU F 123 REMARK 465 ALA F 124 REMARK 465 LYS F 125 REMARK 465 LYS F 126 REMARK 465 ARG F 127 REMARK 465 PHE F 128 REMARK 465 LYS F 129 REMARK 465 ASP F 130 REMARK 465 LYS F 131 REMARK 465 SER F 132 REMARK 465 SER F 133 REMARK 465 GLU F 134 REMARK 465 GLU F 135 REMARK 465 ALA F 136 REMARK 465 VAL F 137 REMARK 465 ARG F 138 REMARK 465 GLU F 139 REMARK 465 VAL F 140 REMARK 465 HIS F 141 REMARK 465 ARG F 142 REMARK 465 LEU F 143 REMARK 465 ILE F 144 REMARK 465 GLU F 145 REMARK 465 GLY F 146 REMARK 465 LYS F 147 REMARK 465 ALA F 148 REMARK 465 PRO F 149 REMARK 465 ILE F 150 REMARK 465 ILE F 151 REMARK 465 SER F 152 REMARK 465 GLY F 153 REMARK 465 VAL F 154 REMARK 465 THR F 155 REMARK 465 LYS F 156 REMARK 465 ALA F 157 REMARK 465 ILE F 158 REMARK 465 SER F 159 REMARK 465 SER F 160 REMARK 465 PRO F 161 REMARK 465 THR F 162 REMARK 465 VAL F 163 REMARK 465 SER F 164 REMARK 465 ARG F 165 REMARK 465 LEU F 166 REMARK 465 THR F 167 REMARK 465 ASP F 168 REMARK 465 THR F 169 REMARK 465 THR F 170 REMARK 465 LYS F 171 REMARK 465 PHE F 172 REMARK 465 THR F 173 REMARK 465 GLY F 174 REMARK 465 ALA C 44 REMARK 465 SER C 45 REMARK 465 PRO C 46 REMARK 465 GLU C 47 REMARK 465 LEU C 48 REMARK 465 SER C 49 REMARK 465 ALA C 50 REMARK 465 LEU C 51 REMARK 465 GLU C 52 REMARK 465 GLU C 53 REMARK 465 ALA C 54 REMARK 465 PHE C 55 REMARK 465 ARG C 56 REMARK 465 ARG C 57 REMARK 465 PHE C 58 REMARK 465 ALA C 59 REMARK 465 VAL C 60 REMARK 465 HIS C 61 REMARK 465 GLY C 62 REMARK 465 ASP C 63 REMARK 465 ALA C 64 REMARK 465 ARG C 65 REMARK 465 ALA C 66 REMARK 465 THR C 67 REMARK 465 GLY C 68 REMARK 465 ARG C 69 REMARK 465 GLY C 105 REMARK 465 LYS C 106 REMARK 465 SER C 107 REMARK 465 CYS C 108 REMARK 465 ARG C 109 REMARK 465 THR C 110 REMARK 465 ILE C 111 REMARK 465 THR C 112 REMARK 465 PHE C 113 REMARK 465 GLU C 114 REMARK 465 GLN C 115 REMARK 465 PHE C 116 REMARK 465 GLN C 117 REMARK 465 GLU C 118 REMARK 465 ALA C 119 REMARK 465 LEU C 120 REMARK 465 GLU C 121 REMARK 465 GLU C 122 REMARK 465 LEU C 123 REMARK 465 ALA C 124 REMARK 465 LYS C 125 REMARK 465 LYS C 126 REMARK 465 ARG C 127 REMARK 465 PHE C 128 REMARK 465 LYS C 129 REMARK 465 ASP C 130 REMARK 465 LYS C 131 REMARK 465 SER C 132 REMARK 465 SER C 133 REMARK 465 GLU C 134 REMARK 465 GLU C 135 REMARK 465 ALA C 136 REMARK 465 VAL C 137 REMARK 465 ARG C 138 REMARK 465 GLU C 139 REMARK 465 VAL C 140 REMARK 465 HIS C 141 REMARK 465 ARG C 142 REMARK 465 LEU C 143 REMARK 465 ILE C 144 REMARK 465 GLU C 145 REMARK 465 GLY C 146 REMARK 465 LYS C 147 REMARK 465 ALA C 148 REMARK 465 PRO C 149 REMARK 465 ILE C 150 REMARK 465 ILE C 151 REMARK 465 SER C 152 REMARK 465 GLY C 153 REMARK 465 VAL C 154 REMARK 465 THR C 155 REMARK 465 LYS C 156 REMARK 465 ALA C 157 REMARK 465 ILE C 158 REMARK 465 SER C 159 REMARK 465 SER C 160 REMARK 465 PRO C 161 REMARK 465 THR C 162 REMARK 465 VAL C 163 REMARK 465 SER C 164 REMARK 465 ARG C 165 REMARK 465 LEU C 166 REMARK 465 THR C 167 REMARK 465 ASP C 168 REMARK 465 THR C 169 REMARK 465 THR C 170 REMARK 465 LYS C 171 REMARK 465 PHE C 172 REMARK 465 THR C 173 REMARK 465 GLY C 174 REMARK 465 ALA D 44 REMARK 465 SER D 45 REMARK 465 PRO D 46 REMARK 465 GLU D 47 REMARK 465 LEU D 48 REMARK 465 SER D 49 REMARK 465 ALA D 50 REMARK 465 LEU D 51 REMARK 465 GLU D 52 REMARK 465 GLU D 53 REMARK 465 ALA D 54 REMARK 465 PHE D 55 REMARK 465 ARG D 56 REMARK 465 ARG D 57 REMARK 465 PHE D 58 REMARK 465 ALA D 59 REMARK 465 VAL D 60 REMARK 465 HIS D 61 REMARK 465 GLY D 62 REMARK 465 ASP D 63 REMARK 465 ALA D 64 REMARK 465 ARG D 65 REMARK 465 ALA D 66 REMARK 465 THR D 67 REMARK 465 GLY D 68 REMARK 465 ARG D 69 REMARK 465 GLY D 105 REMARK 465 LYS D 106 REMARK 465 SER D 107 REMARK 465 CYS D 108 REMARK 465 ARG D 109 REMARK 465 THR D 110 REMARK 465 ILE D 111 REMARK 465 THR D 112 REMARK 465 PHE D 113 REMARK 465 GLU D 114 REMARK 465 GLN D 115 REMARK 465 PHE D 116 REMARK 465 GLN D 117 REMARK 465 GLU D 118 REMARK 465 ALA D 119 REMARK 465 LEU D 120 REMARK 465 GLU D 121 REMARK 465 GLU D 122 REMARK 465 LEU D 123 REMARK 465 ALA D 124 REMARK 465 LYS D 125 REMARK 465 LYS D 126 REMARK 465 ARG D 127 REMARK 465 PHE D 128 REMARK 465 LYS D 129 REMARK 465 ASP D 130 REMARK 465 LYS D 131 REMARK 465 SER D 132 REMARK 465 SER D 133 REMARK 465 GLU D 134 REMARK 465 GLU D 135 REMARK 465 ALA D 136 REMARK 465 VAL D 137 REMARK 465 ARG D 138 REMARK 465 GLU D 139 REMARK 465 VAL D 140 REMARK 465 HIS D 141 REMARK 465 ARG D 142 REMARK 465 LEU D 143 REMARK 465 ILE D 144 REMARK 465 GLU D 145 REMARK 465 GLY D 146 REMARK 465 LYS D 147 REMARK 465 ALA D 148 REMARK 465 PRO D 149 REMARK 465 ILE D 150 REMARK 465 ILE D 151 REMARK 465 SER D 152 REMARK 465 GLY D 153 REMARK 465 VAL D 154 REMARK 465 THR D 155 REMARK 465 LYS D 156 REMARK 465 ALA D 157 REMARK 465 ILE D 158 REMARK 465 SER D 159 REMARK 465 SER D 160 REMARK 465 PRO D 161 REMARK 465 THR D 162 REMARK 465 VAL D 163 REMARK 465 SER D 164 REMARK 465 ARG D 165 REMARK 465 LEU D 166 REMARK 465 THR D 167 REMARK 465 ASP D 168 REMARK 465 THR D 169 REMARK 465 THR D 170 REMARK 465 LYS D 171 REMARK 465 PHE D 172 REMARK 465 THR D 173 REMARK 465 GLY D 174 REMARK 465 ALA E 44 REMARK 465 SER E 45 REMARK 465 PRO E 46 REMARK 465 GLU E 47 REMARK 465 LEU E 48 REMARK 465 SER E 49 REMARK 465 ALA E 50 REMARK 465 LEU E 51 REMARK 465 GLU E 52 REMARK 465 GLU E 53 REMARK 465 ALA E 54 REMARK 465 PHE E 55 REMARK 465 ARG E 56 REMARK 465 ARG E 57 REMARK 465 PHE E 58 REMARK 465 ALA E 59 REMARK 465 VAL E 60 REMARK 465 HIS E 61 REMARK 465 GLY E 62 REMARK 465 ASP E 63 REMARK 465 ALA E 64 REMARK 465 ARG E 65 REMARK 465 ALA E 66 REMARK 465 THR E 67 REMARK 465 GLY E 68 REMARK 465 ARG E 69 REMARK 465 GLY E 105 REMARK 465 LYS E 106 REMARK 465 SER E 107 REMARK 465 CYS E 108 REMARK 465 ARG E 109 REMARK 465 THR E 110 REMARK 465 ILE E 111 REMARK 465 THR E 112 REMARK 465 PHE E 113 REMARK 465 GLU E 114 REMARK 465 GLN E 115 REMARK 465 PHE E 116 REMARK 465 GLN E 117 REMARK 465 GLU E 118 REMARK 465 ALA E 119 REMARK 465 LEU E 120 REMARK 465 GLU E 121 REMARK 465 GLU E 122 REMARK 465 LEU E 123 REMARK 465 ALA E 124 REMARK 465 LYS E 125 REMARK 465 LYS E 126 REMARK 465 ARG E 127 REMARK 465 PHE E 128 REMARK 465 LYS E 129 REMARK 465 ASP E 130 REMARK 465 LYS E 131 REMARK 465 SER E 132 REMARK 465 SER E 133 REMARK 465 GLU E 134 REMARK 465 GLU E 135 REMARK 465 ALA E 136 REMARK 465 VAL E 137 REMARK 465 ARG E 138 REMARK 465 GLU E 139 REMARK 465 VAL E 140 REMARK 465 HIS E 141 REMARK 465 ARG E 142 REMARK 465 LEU E 143 REMARK 465 ILE E 144 REMARK 465 GLU E 145 REMARK 465 GLY E 146 REMARK 465 LYS E 147 REMARK 465 ALA E 148 REMARK 465 PRO E 149 REMARK 465 ILE E 150 REMARK 465 ILE E 151 REMARK 465 SER E 152 REMARK 465 GLY E 153 REMARK 465 VAL E 154 REMARK 465 THR E 155 REMARK 465 LYS E 156 REMARK 465 ALA E 157 REMARK 465 ILE E 158 REMARK 465 SER E 159 REMARK 465 SER E 160 REMARK 465 PRO E 161 REMARK 465 THR E 162 REMARK 465 VAL E 163 REMARK 465 SER E 164 REMARK 465 ARG E 165 REMARK 465 LEU E 166 REMARK 465 THR E 167 REMARK 465 ASP E 168 REMARK 465 THR E 169 REMARK 465 THR E 170 REMARK 465 LYS E 171 REMARK 465 PHE E 172 REMARK 465 THR E 173 REMARK 465 GLY E 174 REMARK 465 ALA A 44 REMARK 465 SER A 45 REMARK 465 PRO A 46 REMARK 465 GLU A 47 REMARK 465 LEU A 48 REMARK 465 SER A 49 REMARK 465 ALA A 50 REMARK 465 LEU A 51 REMARK 465 GLU A 52 REMARK 465 GLU A 53 REMARK 465 ALA A 54 REMARK 465 PHE A 55 REMARK 465 ARG A 56 REMARK 465 ARG A 57 REMARK 465 PHE A 58 REMARK 465 ALA A 59 REMARK 465 VAL A 60 REMARK 465 HIS A 61 REMARK 465 GLY A 62 REMARK 465 ASP A 63 REMARK 465 ALA A 64 REMARK 465 ARG A 65 REMARK 465 ALA A 66 REMARK 465 THR A 67 REMARK 465 GLY A 68 REMARK 465 ARG A 69 REMARK 465 GLY A 105 REMARK 465 LYS A 106 REMARK 465 SER A 107 REMARK 465 CYS A 108 REMARK 465 ARG A 109 REMARK 465 THR A 110 REMARK 465 ILE A 111 REMARK 465 THR A 112 REMARK 465 PHE A 113 REMARK 465 GLU A 114 REMARK 465 GLN A 115 REMARK 465 PHE A 116 REMARK 465 GLN A 117 REMARK 465 GLU A 118 REMARK 465 ALA A 119 REMARK 465 LEU A 120 REMARK 465 GLU A 121 REMARK 465 GLU A 122 REMARK 465 LEU A 123 REMARK 465 ALA A 124 REMARK 465 LYS A 125 REMARK 465 LYS A 126 REMARK 465 ARG A 127 REMARK 465 PHE A 128 REMARK 465 LYS A 129 REMARK 465 ASP A 130 REMARK 465 LYS A 131 REMARK 465 SER A 132 REMARK 465 SER A 133 REMARK 465 GLU A 134 REMARK 465 GLU A 135 REMARK 465 ALA A 136 REMARK 465 VAL A 137 REMARK 465 ARG A 138 REMARK 465 GLU A 139 REMARK 465 VAL A 140 REMARK 465 HIS A 141 REMARK 465 ARG A 142 REMARK 465 LEU A 143 REMARK 465 ILE A 144 REMARK 465 GLU A 145 REMARK 465 GLY A 146 REMARK 465 LYS A 147 REMARK 465 ALA A 148 REMARK 465 PRO A 149 REMARK 465 ILE A 150 REMARK 465 ILE A 151 REMARK 465 SER A 152 REMARK 465 GLY A 153 REMARK 465 VAL A 154 REMARK 465 THR A 155 REMARK 465 LYS A 156 REMARK 465 ALA A 157 REMARK 465 ILE A 158 REMARK 465 SER A 159 REMARK 465 SER A 160 REMARK 465 PRO A 161 REMARK 465 THR A 162 REMARK 465 VAL A 163 REMARK 465 SER A 164 REMARK 465 ARG A 165 REMARK 465 LEU A 166 REMARK 465 THR A 167 REMARK 465 ASP A 168 REMARK 465 THR A 169 REMARK 465 THR A 170 REMARK 465 LYS A 171 REMARK 465 PHE A 172 REMARK 465 THR A 173 REMARK 465 GLY A 174 REMARK 465 ALA B 44 REMARK 465 SER B 45 REMARK 465 PRO B 46 REMARK 465 GLU B 47 REMARK 465 LEU B 48 REMARK 465 SER B 49 REMARK 465 ALA B 50 REMARK 465 LEU B 51 REMARK 465 GLU B 52 REMARK 465 GLU B 53 REMARK 465 ALA B 54 REMARK 465 PHE B 55 REMARK 465 ARG B 56 REMARK 465 ARG B 57 REMARK 465 PHE B 58 REMARK 465 ALA B 59 REMARK 465 VAL B 60 REMARK 465 HIS B 61 REMARK 465 GLY B 62 REMARK 465 ASP B 63 REMARK 465 ALA B 64 REMARK 465 ARG B 65 REMARK 465 ALA B 66 REMARK 465 THR B 67 REMARK 465 GLY B 68 REMARK 465 ARG B 69 REMARK 465 GLY B 105 REMARK 465 LYS B 106 REMARK 465 SER B 107 REMARK 465 CYS B 108 REMARK 465 ARG B 109 REMARK 465 THR B 110 REMARK 465 ILE B 111 REMARK 465 THR B 112 REMARK 465 PHE B 113 REMARK 465 GLU B 114 REMARK 465 GLN B 115 REMARK 465 PHE B 116 REMARK 465 GLN B 117 REMARK 465 GLU B 118 REMARK 465 ALA B 119 REMARK 465 LEU B 120 REMARK 465 GLU B 121 REMARK 465 GLU B 122 REMARK 465 LEU B 123 REMARK 465 ALA B 124 REMARK 465 LYS B 125 REMARK 465 LYS B 126 REMARK 465 ARG B 127 REMARK 465 PHE B 128 REMARK 465 LYS B 129 REMARK 465 ASP B 130 REMARK 465 LYS B 131 REMARK 465 SER B 132 REMARK 465 SER B 133 REMARK 465 GLU B 134 REMARK 465 GLU B 135 REMARK 465 ALA B 136 REMARK 465 VAL B 137 REMARK 465 ARG B 138 REMARK 465 GLU B 139 REMARK 465 VAL B 140 REMARK 465 HIS B 141 REMARK 465 ARG B 142 REMARK 465 LEU B 143 REMARK 465 ILE B 144 REMARK 465 GLU B 145 REMARK 465 GLY B 146 REMARK 465 LYS B 147 REMARK 465 ALA B 148 REMARK 465 PRO B 149 REMARK 465 ILE B 150 REMARK 465 ILE B 151 REMARK 465 SER B 152 REMARK 465 GLY B 153 REMARK 465 VAL B 154 REMARK 465 THR B 155 REMARK 465 LYS B 156 REMARK 465 ALA B 157 REMARK 465 ILE B 158 REMARK 465 SER B 159 REMARK 465 SER B 160 REMARK 465 PRO B 161 REMARK 465 THR B 162 REMARK 465 VAL B 163 REMARK 465 SER B 164 REMARK 465 ARG B 165 REMARK 465 LEU B 166 REMARK 465 THR B 167 REMARK 465 ASP B 168 REMARK 465 THR B 169 REMARK 465 THR B 170 REMARK 465 LYS B 171 REMARK 465 PHE B 172 REMARK 465 THR B 173 REMARK 465 GLY B 174 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN F 75 -20.14 72.91 REMARK 500 TRP F 76 3.56 -151.16 REMARK 500 ASN C 75 -20.17 72.87 REMARK 500 TRP C 76 3.56 -151.10 REMARK 500 ASN D 75 -20.11 72.82 REMARK 500 TRP D 76 3.61 -151.16 REMARK 500 ASN E 75 -20.11 72.82 REMARK 500 TRP E 76 3.61 -151.15 REMARK 500 ASN A 75 -20.09 72.83 REMARK 500 TRP A 76 3.63 -151.19 REMARK 500 ASN B 75 -20.15 72.85 REMARK 500 TRP B 76 3.54 -151.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-61132 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF P25ALPHA CORE FIBRIL DBREF 9J4D F 44 174 UNP O94811 TPPP_HUMAN 44 174 DBREF 9J4D C 44 174 UNP O94811 TPPP_HUMAN 44 174 DBREF 9J4D D 44 174 UNP O94811 TPPP_HUMAN 44 174 DBREF 9J4D E 44 174 UNP O94811 TPPP_HUMAN 44 174 DBREF 9J4D A 44 174 UNP O94811 TPPP_HUMAN 44 174 DBREF 9J4D B 44 174 UNP O94811 TPPP_HUMAN 44 174 SEQRES 1 F 131 ALA SER PRO GLU LEU SER ALA LEU GLU GLU ALA PHE ARG SEQRES 2 F 131 ARG PHE ALA VAL HIS GLY ASP ALA ARG ALA THR GLY ARG SEQRES 3 F 131 GLU MET HIS GLY LYS ASN TRP SER LYS LEU CYS LYS ASP SEQRES 4 F 131 CYS GLN VAL ILE ASP GLY ARG ASN VAL THR VAL THR ASP SEQRES 5 F 131 VAL ASP ILE VAL PHE SER LYS ILE LYS GLY LYS SER CYS SEQRES 6 F 131 ARG THR ILE THR PHE GLU GLN PHE GLN GLU ALA LEU GLU SEQRES 7 F 131 GLU LEU ALA LYS LYS ARG PHE LYS ASP LYS SER SER GLU SEQRES 8 F 131 GLU ALA VAL ARG GLU VAL HIS ARG LEU ILE GLU GLY LYS SEQRES 9 F 131 ALA PRO ILE ILE SER GLY VAL THR LYS ALA ILE SER SER SEQRES 10 F 131 PRO THR VAL SER ARG LEU THR ASP THR THR LYS PHE THR SEQRES 11 F 131 GLY SEQRES 1 C 131 ALA SER PRO GLU LEU SER ALA LEU GLU GLU ALA PHE ARG SEQRES 2 C 131 ARG PHE ALA VAL HIS GLY ASP ALA ARG ALA THR GLY ARG SEQRES 3 C 131 GLU MET HIS GLY LYS ASN TRP SER LYS LEU CYS LYS ASP SEQRES 4 C 131 CYS GLN VAL ILE ASP GLY ARG ASN VAL THR VAL THR ASP SEQRES 5 C 131 VAL ASP ILE VAL PHE SER LYS ILE LYS GLY LYS SER CYS SEQRES 6 C 131 ARG THR ILE THR PHE GLU GLN PHE GLN GLU ALA LEU GLU SEQRES 7 C 131 GLU LEU ALA LYS LYS ARG PHE LYS ASP LYS SER SER GLU SEQRES 8 C 131 GLU ALA VAL ARG GLU VAL HIS ARG LEU ILE GLU GLY LYS SEQRES 9 C 131 ALA PRO ILE ILE SER GLY VAL THR LYS ALA ILE SER SER SEQRES 10 C 131 PRO THR VAL SER ARG LEU THR ASP THR THR LYS PHE THR SEQRES 11 C 131 GLY SEQRES 1 D 131 ALA SER PRO GLU LEU SER ALA LEU GLU GLU ALA PHE ARG SEQRES 2 D 131 ARG PHE ALA VAL HIS GLY ASP ALA ARG ALA THR GLY ARG SEQRES 3 D 131 GLU MET HIS GLY LYS ASN TRP SER LYS LEU CYS LYS ASP SEQRES 4 D 131 CYS GLN VAL ILE ASP GLY ARG ASN VAL THR VAL THR ASP SEQRES 5 D 131 VAL ASP ILE VAL PHE SER LYS ILE LYS GLY LYS SER CYS SEQRES 6 D 131 ARG THR ILE THR PHE GLU GLN PHE GLN GLU ALA LEU GLU SEQRES 7 D 131 GLU LEU ALA LYS LYS ARG PHE LYS ASP LYS SER SER GLU SEQRES 8 D 131 GLU ALA VAL ARG GLU VAL HIS ARG LEU ILE GLU GLY LYS SEQRES 9 D 131 ALA PRO ILE ILE SER GLY VAL THR LYS ALA ILE SER SER SEQRES 10 D 131 PRO THR VAL SER ARG LEU THR ASP THR THR LYS PHE THR SEQRES 11 D 131 GLY SEQRES 1 E 131 ALA SER PRO GLU LEU SER ALA LEU GLU GLU ALA PHE ARG SEQRES 2 E 131 ARG PHE ALA VAL HIS GLY ASP ALA ARG ALA THR GLY ARG SEQRES 3 E 131 GLU MET HIS GLY LYS ASN TRP SER LYS LEU CYS LYS ASP SEQRES 4 E 131 CYS GLN VAL ILE ASP GLY ARG ASN VAL THR VAL THR ASP SEQRES 5 E 131 VAL ASP ILE VAL PHE SER LYS ILE LYS GLY LYS SER CYS SEQRES 6 E 131 ARG THR ILE THR PHE GLU GLN PHE GLN GLU ALA LEU GLU SEQRES 7 E 131 GLU LEU ALA LYS LYS ARG PHE LYS ASP LYS SER SER GLU SEQRES 8 E 131 GLU ALA VAL ARG GLU VAL HIS ARG LEU ILE GLU GLY LYS SEQRES 9 E 131 ALA PRO ILE ILE SER GLY VAL THR LYS ALA ILE SER SER SEQRES 10 E 131 PRO THR VAL SER ARG LEU THR ASP THR THR LYS PHE THR SEQRES 11 E 131 GLY SEQRES 1 A 131 ALA SER PRO GLU LEU SER ALA LEU GLU GLU ALA PHE ARG SEQRES 2 A 131 ARG PHE ALA VAL HIS GLY ASP ALA ARG ALA THR GLY ARG SEQRES 3 A 131 GLU MET HIS GLY LYS ASN TRP SER LYS LEU CYS LYS ASP SEQRES 4 A 131 CYS GLN VAL ILE ASP GLY ARG ASN VAL THR VAL THR ASP SEQRES 5 A 131 VAL ASP ILE VAL PHE SER LYS ILE LYS GLY LYS SER CYS SEQRES 6 A 131 ARG THR ILE THR PHE GLU GLN PHE GLN GLU ALA LEU GLU SEQRES 7 A 131 GLU LEU ALA LYS LYS ARG PHE LYS ASP LYS SER SER GLU SEQRES 8 A 131 GLU ALA VAL ARG GLU VAL HIS ARG LEU ILE GLU GLY LYS SEQRES 9 A 131 ALA PRO ILE ILE SER GLY VAL THR LYS ALA ILE SER SER SEQRES 10 A 131 PRO THR VAL SER ARG LEU THR ASP THR THR LYS PHE THR SEQRES 11 A 131 GLY SEQRES 1 B 131 ALA SER PRO GLU LEU SER ALA LEU GLU GLU ALA PHE ARG SEQRES 2 B 131 ARG PHE ALA VAL HIS GLY ASP ALA ARG ALA THR GLY ARG SEQRES 3 B 131 GLU MET HIS GLY LYS ASN TRP SER LYS LEU CYS LYS ASP SEQRES 4 B 131 CYS GLN VAL ILE ASP GLY ARG ASN VAL THR VAL THR ASP SEQRES 5 B 131 VAL ASP ILE VAL PHE SER LYS ILE LYS GLY LYS SER CYS SEQRES 6 B 131 ARG THR ILE THR PHE GLU GLN PHE GLN GLU ALA LEU GLU SEQRES 7 B 131 GLU LEU ALA LYS LYS ARG PHE LYS ASP LYS SER SER GLU SEQRES 8 B 131 GLU ALA VAL ARG GLU VAL HIS ARG LEU ILE GLU GLY LYS SEQRES 9 B 131 ALA PRO ILE ILE SER GLY VAL THR LYS ALA ILE SER SER SEQRES 10 B 131 PRO THR VAL SER ARG LEU THR ASP THR THR LYS PHE THR SEQRES 11 B 131 GLY SHEET 1 AA1 3 MET C 71 HIS C 72 0 SHEET 2 AA1 3 MET F 71 HIS F 72 1 N HIS F 72 O MET C 71 SHEET 3 AA1 3 MET D 71 HIS D 72 1 O HIS D 72 N MET F 71 SHEET 1 AA2 3 LEU C 79 VAL C 85 0 SHEET 2 AA2 3 LEU F 79 VAL F 85 1 N ASP F 82 O LYS C 81 SHEET 3 AA2 3 LEU D 79 VAL D 85 1 O ASP D 82 N LYS F 81 SHEET 1 AA3 3 ASN C 90 THR C 94 0 SHEET 2 AA3 3 ASN F 90 THR F 94 1 N ASN F 90 O VAL C 91 SHEET 3 AA3 3 ASN D 90 THR D 94 1 O ASN D 90 N VAL F 91 SHEET 1 AA4 3 LYS C 102 ILE C 103 0 SHEET 2 AA4 3 LYS F 102 ILE F 103 1 N ILE F 103 O LYS C 102 SHEET 3 AA4 3 LYS D 102 ILE D 103 1 O ILE D 103 N LYS F 102 SHEET 1 AA5 3 MET A 71 HIS A 72 0 SHEET 2 AA5 3 MET E 71 HIS E 72 1 N HIS E 72 O MET A 71 SHEET 3 AA5 3 MET B 71 HIS B 72 1 O HIS B 72 N MET E 71 SHEET 1 AA6 3 LEU A 79 VAL A 85 0 SHEET 2 AA6 3 LEU E 79 VAL E 85 1 N ASP E 82 O LYS A 81 SHEET 3 AA6 3 LEU B 79 VAL B 85 1 O ASP B 82 N LYS E 81 SHEET 1 AA7 3 ASN A 90 THR A 94 0 SHEET 2 AA7 3 ASN E 90 THR E 94 1 N ASN E 90 O VAL A 91 SHEET 3 AA7 3 ASN B 90 THR B 94 1 O ASN B 90 N VAL E 91 SHEET 1 AA8 3 LYS A 102 ILE A 103 0 SHEET 2 AA8 3 LYS E 102 ILE E 103 1 N ILE E 103 O LYS A 102 SHEET 3 AA8 3 LYS B 102 ILE B 103 1 O ILE B 103 N LYS E 102 SSBOND 1 CYS F 80 CYS F 83 1555 1555 2.03 SSBOND 2 CYS C 80 CYS C 83 1555 1555 2.03 SSBOND 3 CYS D 80 CYS D 83 1555 1555 2.03 SSBOND 4 CYS E 80 CYS E 83 1555 1555 2.03 SSBOND 5 CYS A 80 CYS A 83 1555 1555 2.03 SSBOND 6 CYS B 80 CYS B 83 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 279 LYS F 104 TER 558 LYS C 104 TER 837 LYS D 104 TER 1116 LYS E 104 TER 1395 LYS A 104 TER 1674 LYS B 104 CONECT 91 114 CONECT 114 91 CONECT 370 393 CONECT 393 370 CONECT 649 672 CONECT 672 649 CONECT 928 951 CONECT 951 928 CONECT 1207 1230 CONECT 1230 1207 CONECT 1486 1509 CONECT 1509 1486 MASTER 711 0 0 0 24 0 0 6 1668 6 12 66 END