HEADER REPLICATION 24-AUG-24 9JA3 TITLE HERPES SIMPLEX VIRUS TYPE 1 POLYMERASE MACHINERY IN COMPLEX WITH TITLE 2 DUPLEX DNA, ACYCLOVIR TRIPHOSPHATE AND CALCIUM IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.7; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA POLYMERASE PROCESSIVITY FACTOR; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: DNA-BINDING PROTEIN UL42,POLYMERASE ACCESSORY PROTEIN,PAP; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (27-MER); COMPND 13 CHAIN: T; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DNA (5'- COMPND 17 D(*AP*GP*GP*CP*CP*AP*TP*AP*CP*GP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*TP*AP* COMPND 18 C)-3'); COMPND 19 CHAIN: P; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 1 (STRAIN 17); SOURCE 3 ORGANISM_COMMON: HHV-1, HUMAN HERPES SIMPLEX VIRUS 1; SOURCE 4 ORGANISM_TAXID: 10299; SOURCE 5 GENE: UL30; SOURCE 6 EXPRESSION_SYSTEM: INSECT EXPRESSION VECTOR PBLUEBACMSGCA1; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1944736; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 1 (STRAIN 17); SOURCE 10 ORGANISM_COMMON: HHV-1, HUMAN HERPES SIMPLEX VIRUS 1; SOURCE 11 ORGANISM_TAXID: 10299; SOURCE 12 GENE: UL42; SOURCE 13 EXPRESSION_SYSTEM: INSECT EXPRESSION VECTOR PBLUEBACMSGCA1HIS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 1944738; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 MOL_ID: 4; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630 KEYWDS HERPES SIMPLEX VIRUS TYPE 1, HSV-1, UL30, UL42, DNA REPLICATION KEYWDS 2 HOLOENZYME, DNA REPLICATION MACHINERY, ACYCLOVIR TRIPHOSPHATE, DNA, KEYWDS 3 CALCIUM, REPLICATION EXPDTA ELECTRON MICROSCOPY AUTHOR Y.Q.WU,X.L.CHEN,Z.Y.JIANG,D.Y.LI,Z.Y.ZHANG,C.J.DONG REVDAT 1 03-SEP-25 9JA3 0 JRNL AUTH Y.Q.WU,X.L.CHEN,Z.Y.JIANG,D.Y.LI,Z.Y.ZHANG,C.J.DONG JRNL TITL STRUCTURAL BASIS OF HERPES SIMPLEX TYPE 1 VIRUS DNA JRNL TITL 2 POLYMERASE HOLOENZYME IN DNA REPLICATION AND ACYCLOVIR JRNL TITL 3 INHIBITION AND PROOF-READING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.150 REMARK 3 NUMBER OF PARTICLES : 678158 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9JA3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 26-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1300050734. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HERPES SIMPLEX VIRUS TYPE 1 DNA REMARK 245 REPLICATION MACHINERY IN REMARK 245 COMPLEX DNA DUPLEX AND DGTP REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.40 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.20 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOCONTINUUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, T, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 SER A 3 REMARK 465 GLY A 4 REMARK 465 GLY A 5 REMARK 465 GLY A 6 REMARK 465 GLY A 7 REMARK 465 PRO A 8 REMARK 465 LEU A 9 REMARK 465 SER A 10 REMARK 465 PRO A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 LYS A 14 REMARK 465 SER A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 ARG A 18 REMARK 465 ALA A 19 REMARK 465 ALA A 20 REMARK 465 SER A 21 REMARK 465 GLY A 22 REMARK 465 PHE A 23 REMARK 465 PHE A 24 REMARK 465 ALA A 25 REMARK 465 PRO A 26 REMARK 465 ALA A 27 REMARK 465 GLY A 28 REMARK 465 PRO A 29 REMARK 465 ARG A 30 REMARK 465 GLY A 31 REMARK 465 ALA A 32 REMARK 465 SER A 33 REMARK 465 ARG A 34 REMARK 465 GLY A 35 REMARK 465 PRO A 36 REMARK 465 PRO A 37 REMARK 465 PRO A 38 REMARK 465 CYS A 39 REMARK 465 LEU A 40 REMARK 465 ARG A 41 REMARK 465 GLN A 42 REMARK 465 ASN A 43 REMARK 465 PHE A 44 REMARK 465 TYR A 45 REMARK 465 ASN A 46 REMARK 465 PRO A 47 REMARK 465 TYR A 48 REMARK 465 LEU A 49 REMARK 465 ALA A 50 REMARK 465 PRO A 51 REMARK 465 VAL A 52 REMARK 465 GLY A 53 REMARK 465 THR A 54 REMARK 465 GLN A 55 REMARK 465 GLN A 56 REMARK 465 LYS A 57 REMARK 465 PRO A 58 REMARK 465 GLY A 641 REMARK 465 ARG A 642 REMARK 465 PHE A 643 REMARK 465 ARG A 644 REMARK 465 GLY A 645 REMARK 465 ALA A 646 REMARK 465 GLY A 647 REMARK 465 GLY A 648 REMARK 465 GLU A 649 REMARK 465 ALA A 650 REMARK 465 PRO A 651 REMARK 465 LYS A 652 REMARK 465 ARG A 653 REMARK 465 PRO A 654 REMARK 465 ALA A 655 REMARK 465 ALA A 656 REMARK 465 ALA A 657 REMARK 465 ARG A 658 REMARK 465 GLU A 659 REMARK 465 ASP A 660 REMARK 465 GLU A 661 REMARK 465 GLU A 662 REMARK 465 ARG A 663 REMARK 465 PRO A 664 REMARK 465 GLU A 665 REMARK 465 GLU A 666 REMARK 465 GLU A 667 REMARK 465 GLY A 668 REMARK 465 GLU A 669 REMARK 465 ASP A 670 REMARK 465 GLU A 671 REMARK 465 ASP A 672 REMARK 465 GLU A 673 REMARK 465 ARG A 674 REMARK 465 GLU A 675 REMARK 465 GLU A 676 REMARK 465 GLY A 677 REMARK 465 GLY A 678 REMARK 465 GLY A 679 REMARK 465 GLU A 680 REMARK 465 ARG A 681 REMARK 465 GLU A 682 REMARK 465 PRO A 683 REMARK 465 GLU A 684 REMARK 465 GLY A 685 REMARK 465 ALA A 686 REMARK 465 ARG A 687 REMARK 465 GLU A 688 REMARK 465 THR A 689 REMARK 465 ALA A 690 REMARK 465 GLY A 691 REMARK 465 ARG A 692 REMARK 465 LEU A 1096 REMARK 465 ASP A 1097 REMARK 465 ALA A 1098 REMARK 465 ALA A 1099 REMARK 465 ALA A 1100 REMARK 465 PRO A 1101 REMARK 465 GLY A 1102 REMARK 465 ASP A 1103 REMARK 465 GLU A 1104 REMARK 465 PRO A 1105 REMARK 465 ALA A 1106 REMARK 465 PRO A 1107 REMARK 465 PRO A 1108 REMARK 465 ALA A 1109 REMARK 465 ALA A 1110 REMARK 465 LEU A 1111 REMARK 465 PRO A 1112 REMARK 465 SER A 1113 REMARK 465 PRO A 1114 REMARK 465 ALA A 1115 REMARK 465 LYS A 1116 REMARK 465 ARG A 1117 REMARK 465 PRO A 1118 REMARK 465 ARG A 1119 REMARK 465 GLU A 1120 REMARK 465 THR A 1121 REMARK 465 PRO A 1122 REMARK 465 SER A 1123 REMARK 465 PRO A 1124 REMARK 465 ALA A 1125 REMARK 465 ASP A 1126 REMARK 465 PRO A 1127 REMARK 465 PRO A 1128 REMARK 465 GLY A 1129 REMARK 465 GLY A 1130 REMARK 465 ALA A 1131 REMARK 465 SER A 1132 REMARK 465 LYS A 1133 REMARK 465 PRO A 1134 REMARK 465 ARG A 1135 REMARK 465 MET B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 ASP B -15 REMARK 465 TYR B -14 REMARK 465 ASP B -13 REMARK 465 ILE B -12 REMARK 465 PRO B -11 REMARK 465 THR B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 GLY B -2 REMARK 465 ALA B -1 REMARK 465 ASP B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ASP B 3 REMARK 465 SER B 4 REMARK 465 PRO B 5 REMARK 465 GLY B 6 REMARK 465 GLY B 7 REMARK 465 VAL B 8 REMARK 465 ALA B 9 REMARK 465 PRO B 10 REMARK 465 ALA B 11 REMARK 465 SER B 12 REMARK 465 PRO B 13 REMARK 465 VAL B 14 REMARK 465 GLU B 15 REMARK 465 ASP B 16 REMARK 465 ALA B 17 REMARK 465 SER B 18 REMARK 465 ASP B 19 REMARK 465 ALA B 20 REMARK 465 SER B 21 REMARK 465 LEU B 22 REMARK 465 GLY B 23 REMARK 465 GLN B 24 REMARK 465 PRO B 25 REMARK 465 GLU B 26 REMARK 465 GLU B 27 REMARK 465 GLY B 28 REMARK 465 VAL B 228 REMARK 465 SER B 229 REMARK 465 SER B 230 REMARK 465 SER B 231 REMARK 465 THR B 232 REMARK 465 SER B 233 REMARK 465 THR B 234 REMARK 465 GLN B 235 REMARK 465 VAL B 236 REMARK 465 GLN B 237 REMARK 465 ILE B 238 REMARK 465 LEU B 239 REMARK 465 SER B 240 REMARK 465 ASN B 241 REMARK 465 ALA B 242 REMARK 465 LEU B 243 REMARK 465 THR B 244 REMARK 465 LYS B 245 REMARK 465 ALA B 246 REMARK 465 GLY B 247 REMARK 465 GLN B 248 REMARK 465 ALA B 249 REMARK 465 ALA B 250 REMARK 465 ALA B 251 REMARK 465 ILE B 320 REMARK 465 CYS B 321 REMARK 465 LEU B 322 REMARK 465 ASP B 323 REMARK 465 TRP B 324 REMARK 465 LEU B 325 REMARK 465 GLY B 326 REMARK 465 HIS B 327 REMARK 465 SER B 328 REMARK 465 GLN B 329 REMARK 465 GLY B 330 REMARK 465 SER B 331 REMARK 465 PRO B 332 REMARK 465 SER B 333 REMARK 465 ALA B 334 REMARK 465 GLY B 335 REMARK 465 SER B 336 REMARK 465 SER B 337 REMARK 465 ALA B 338 REMARK 465 SER B 339 REMARK 465 ARG B 340 REMARK 465 ALA B 341 REMARK 465 SER B 342 REMARK 465 GLY B 343 REMARK 465 SER B 344 REMARK 465 GLU B 345 REMARK 465 PRO B 346 REMARK 465 THR B 347 REMARK 465 ASP B 348 REMARK 465 SER B 349 REMARK 465 GLN B 350 REMARK 465 ASP B 351 REMARK 465 SER B 352 REMARK 465 ALA B 353 REMARK 465 SER B 354 REMARK 465 ASP B 355 REMARK 465 ALA B 356 REMARK 465 VAL B 357 REMARK 465 SER B 358 REMARK 465 HIS B 359 REMARK 465 GLY B 360 REMARK 465 ASP B 361 REMARK 465 PRO B 362 REMARK 465 GLU B 363 REMARK 465 ASP B 364 REMARK 465 LEU B 365 REMARK 465 ASP B 366 REMARK 465 GLY B 367 REMARK 465 ALA B 368 REMARK 465 ALA B 369 REMARK 465 ARG B 370 REMARK 465 ALA B 371 REMARK 465 GLY B 372 REMARK 465 GLU B 373 REMARK 465 ALA B 374 REMARK 465 GLY B 375 REMARK 465 ALA B 376 REMARK 465 LEU B 377 REMARK 465 HIS B 378 REMARK 465 ALA B 379 REMARK 465 CYS B 380 REMARK 465 PRO B 381 REMARK 465 MET B 382 REMARK 465 PRO B 383 REMARK 465 SER B 384 REMARK 465 SER B 385 REMARK 465 THR B 386 REMARK 465 THR B 387 REMARK 465 ARG B 388 REMARK 465 VAL B 389 REMARK 465 THR B 390 REMARK 465 PRO B 391 REMARK 465 THR B 392 REMARK 465 THR B 393 REMARK 465 LYS B 394 REMARK 465 ARG B 395 REMARK 465 GLY B 396 REMARK 465 ARG B 397 REMARK 465 SER B 398 REMARK 465 GLY B 399 REMARK 465 GLY B 400 REMARK 465 GLU B 401 REMARK 465 ASP B 402 REMARK 465 ALA B 403 REMARK 465 ARG B 404 REMARK 465 ALA B 405 REMARK 465 ASP B 406 REMARK 465 THR B 407 REMARK 465 ALA B 408 REMARK 465 LEU B 409 REMARK 465 LYS B 410 REMARK 465 LYS B 411 REMARK 465 PRO B 412 REMARK 465 LYS B 413 REMARK 465 THR B 414 REMARK 465 GLY B 415 REMARK 465 SER B 416 REMARK 465 PRO B 417 REMARK 465 THR B 418 REMARK 465 ALA B 419 REMARK 465 PRO B 420 REMARK 465 PRO B 421 REMARK 465 PRO B 422 REMARK 465 ALA B 423 REMARK 465 ASP B 424 REMARK 465 PRO B 425 REMARK 465 VAL B 426 REMARK 465 PRO B 427 REMARK 465 LEU B 428 REMARK 465 ASP B 429 REMARK 465 THR B 430 REMARK 465 GLU B 431 REMARK 465 ASP B 432 REMARK 465 ASP B 433 REMARK 465 SER B 434 REMARK 465 ASP B 435 REMARK 465 ALA B 436 REMARK 465 ALA B 437 REMARK 465 ASP B 438 REMARK 465 GLY B 439 REMARK 465 THR B 440 REMARK 465 ALA B 441 REMARK 465 ALA B 442 REMARK 465 ARG B 443 REMARK 465 PRO B 444 REMARK 465 ALA B 445 REMARK 465 ALA B 446 REMARK 465 PRO B 447 REMARK 465 ASP B 448 REMARK 465 ALA B 449 REMARK 465 ARG B 450 REMARK 465 SER B 451 REMARK 465 GLY B 452 REMARK 465 SER B 453 REMARK 465 ARG B 454 REMARK 465 TYR B 455 REMARK 465 ALA B 456 REMARK 465 CYS B 457 REMARK 465 TYR B 458 REMARK 465 PHE B 459 REMARK 465 ARG B 460 REMARK 465 ASP B 461 REMARK 465 LEU B 462 REMARK 465 PRO B 463 REMARK 465 THR B 464 REMARK 465 GLY B 465 REMARK 465 GLU B 466 REMARK 465 ALA B 467 REMARK 465 SER B 468 REMARK 465 PRO B 469 REMARK 465 GLY B 470 REMARK 465 ALA B 471 REMARK 465 PHE B 472 REMARK 465 SER B 473 REMARK 465 ALA B 474 REMARK 465 PHE B 475 REMARK 465 ARG B 476 REMARK 465 GLY B 477 REMARK 465 GLY B 478 REMARK 465 PRO B 479 REMARK 465 GLN B 480 REMARK 465 THR B 481 REMARK 465 PRO B 482 REMARK 465 TYR B 483 REMARK 465 GLY B 484 REMARK 465 PHE B 485 REMARK 465 GLY B 486 REMARK 465 PHE B 487 REMARK 465 PRO B 488 REMARK 465 DA T -13 REMARK 465 DA P -21 REMARK 465 DG P -20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 ARG A 91 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 418 CG OD1 OD2 REMARK 470 LEU A 419 CG CD1 CD2 REMARK 470 GLU A 545 CG CD OE1 OE2 REMARK 470 LYS A 552 CG CD CE NZ REMARK 470 GLN A 794 CG CD OE1 NE2 REMARK 470 SER A 795 OG REMARK 470 GLU A 798 CG CD OE1 OE2 REMARK 470 MET A 872 CG SD CE REMARK 470 LYS A 949 CG CD CE NZ REMARK 470 ARG A 968 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1005 CG CD OE1 OE2 REMARK 470 LEU A1014 CG CD1 CD2 REMARK 470 GLU A1025 CG CD OE1 OE2 REMARK 470 ARG A1081 CG CD NE CZ NH1 NH2 REMARK 470 VAL A1083 CG1 CG2 REMARK 470 GLU A1085 CG CD OE1 OE2 REMARK 470 ARG A1089 CG CD NE CZ NH1 NH2 REMARK 470 LEU A1090 CG CD1 CD2 REMARK 470 LEU A1093 CG CD1 CD2 REMARK 470 ARG A1094 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1095 CG CD OE1 OE2 REMARK 470 LYS A1136 CG CD CE NZ REMARK 470 LEU A1137 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG P -19 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT P -15 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 83 -71.13 -67.37 REMARK 500 LYS A 90 55.34 -100.84 REMARK 500 SER A 119 -106.51 57.80 REMARK 500 HIS A 135 57.85 -93.80 REMARK 500 GLN A 166 40.49 -109.89 REMARK 500 ALA A 220 73.77 58.11 REMARK 500 TYR A 260 149.04 69.19 REMARK 500 CYS A 287 72.85 51.93 REMARK 500 ASN A 323 50.38 -92.12 REMARK 500 LEU A 401 48.99 -87.35 REMARK 500 ILE A 482 -60.01 -101.45 REMARK 500 ASP A 741 -1.13 66.20 REMARK 500 ALA A 744 49.27 -81.99 REMARK 500 ALA A 858 -74.45 -82.04 REMARK 500 PHE A 859 -29.67 -146.58 REMARK 500 THR A 887 -71.33 62.98 REMARK 500 PRO A 921 44.96 -91.61 REMARK 500 ALA A1050 -4.04 67.88 REMARK 500 SER A1140 5.93 -67.38 REMARK 500 ALA A1216 -129.50 61.11 REMARK 500 SER B 53 -65.66 64.98 REMARK 500 GLN B 104 138.01 71.76 REMARK 500 ALA B 114 -119.23 41.26 REMARK 500 GLU B 151 -70.91 52.42 REMARK 500 THR B 163 -105.65 55.40 REMARK 500 ASP B 175 -146.29 58.43 REMARK 500 THR B 192 -57.36 -121.29 REMARK 500 ASP B 195 -162.35 61.74 REMARK 500 THR B 214 -70.92 -81.61 REMARK 500 THR B 215 -41.62 -135.86 REMARK 500 ALA B 223 -95.54 57.53 REMARK 500 MET B 274 -126.12 30.95 REMARK 500 ARG B 275 -99.23 50.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 717 OD1 REMARK 620 2 ASP A 717 OD2 45.1 REMARK 620 3 PHE A 718 O 92.4 74.4 REMARK 620 4 ASP A 888 OD2 74.3 117.3 97.7 REMARK 620 5 AVP T 101 O2B 166.7 143.5 100.0 99.1 REMARK 620 6 AVP T 101 O1A 106.4 100.6 147.9 112.1 64.9 REMARK 620 7 AVP T 101 O3G 120.8 76.0 74.5 162.7 67.8 73.5 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9JA2 RELATED DB: PDB REMARK 900 RELATED ID: EMD-61289 RELATED DB: EMDB REMARK 900 HERPES SIMPLEX VIRUS TYPE 1 POLYMERASE MACHINERY IN COMPLEX WITH REMARK 900 DUPLEX DNA, ACYCLOVIR TRIPHOSPHATE AND CALCIUM IONS DBREF 9JA3 A 1 1235 UNP G8HBE4 G8HBE4_HHV11 1 1235 DBREF 9JA3 B 1 488 UNP P10226 PAP_HHV11 1 488 DBREF 9JA3 T -13 13 PDB 9JA3 9JA3 -13 13 DBREF 9JA3 P -21 1 PDB 9JA3 9JA3 -21 1 SEQADV 9JA3 MET B -24 UNP P10226 INITIATING METHIONINE SEQADV 9JA3 HIS B -23 UNP P10226 EXPRESSION TAG SEQADV 9JA3 HIS B -22 UNP P10226 EXPRESSION TAG SEQADV 9JA3 HIS B -21 UNP P10226 EXPRESSION TAG SEQADV 9JA3 HIS B -20 UNP P10226 EXPRESSION TAG SEQADV 9JA3 HIS B -19 UNP P10226 EXPRESSION TAG SEQADV 9JA3 HIS B -18 UNP P10226 EXPRESSION TAG SEQADV 9JA3 HIS B -17 UNP P10226 EXPRESSION TAG SEQADV 9JA3 HIS B -16 UNP P10226 EXPRESSION TAG SEQADV 9JA3 ASP B -15 UNP P10226 EXPRESSION TAG SEQADV 9JA3 TYR B -14 UNP P10226 EXPRESSION TAG SEQADV 9JA3 ASP B -13 UNP P10226 EXPRESSION TAG SEQADV 9JA3 ILE B -12 UNP P10226 EXPRESSION TAG SEQADV 9JA3 PRO B -11 UNP P10226 EXPRESSION TAG SEQADV 9JA3 THR B -10 UNP P10226 EXPRESSION TAG SEQADV 9JA3 THR B -9 UNP P10226 EXPRESSION TAG SEQADV 9JA3 GLU B -8 UNP P10226 EXPRESSION TAG SEQADV 9JA3 ASN B -7 UNP P10226 EXPRESSION TAG SEQADV 9JA3 LEU B -6 UNP P10226 EXPRESSION TAG SEQADV 9JA3 TYR B -5 UNP P10226 EXPRESSION TAG SEQADV 9JA3 PHE B -4 UNP P10226 EXPRESSION TAG SEQADV 9JA3 GLN B -3 UNP P10226 EXPRESSION TAG SEQADV 9JA3 GLY B -2 UNP P10226 EXPRESSION TAG SEQADV 9JA3 ALA B -1 UNP P10226 EXPRESSION TAG SEQADV 9JA3 ASP B 0 UNP P10226 EXPRESSION TAG SEQRES 1 A 1235 MET PHE SER GLY GLY GLY GLY PRO LEU SER PRO GLY GLY SEQRES 2 A 1235 LYS SER ALA ALA ARG ALA ALA SER GLY PHE PHE ALA PRO SEQRES 3 A 1235 ALA GLY PRO ARG GLY ALA SER ARG GLY PRO PRO PRO CYS SEQRES 4 A 1235 LEU ARG GLN ASN PHE TYR ASN PRO TYR LEU ALA PRO VAL SEQRES 5 A 1235 GLY THR GLN GLN LYS PRO THR GLY PRO THR GLN ARG HIS SEQRES 6 A 1235 THR TYR TYR SER GLU CYS ASP GLU PHE ARG PHE ILE ALA SEQRES 7 A 1235 PRO ARG VAL LEU ASP GLU ASP ALA PRO PRO GLU LYS ARG SEQRES 8 A 1235 ALA GLY VAL HIS ASP GLY HIS LEU LYS ARG ALA PRO LYS SEQRES 9 A 1235 VAL TYR CYS GLY GLY ASP GLU ARG ASP VAL LEU ARG VAL SEQRES 10 A 1235 GLY SER GLY GLY PHE TRP PRO ARG ARG SER ARG LEU TRP SEQRES 11 A 1235 GLY GLY VAL ASP HIS ALA PRO ALA GLY PHE ASN PRO THR SEQRES 12 A 1235 VAL THR VAL PHE HIS VAL TYR ASP ILE LEU GLU ASN VAL SEQRES 13 A 1235 GLU HIS ALA TYR GLY MET ARG ALA ALA GLN PHE HIS ALA SEQRES 14 A 1235 ARG PHE MET ASP ALA ILE THR PRO THR GLY THR VAL ILE SEQRES 15 A 1235 THR LEU LEU GLY LEU THR PRO GLU GLY HIS ARG VAL ALA SEQRES 16 A 1235 VAL HIS VAL TYR GLY THR ARG GLN TYR PHE TYR MET ASN SEQRES 17 A 1235 LYS GLU GLU VAL ASP ARG HIS LEU GLN CYS ARG ALA PRO SEQRES 18 A 1235 ARG ASP LEU CYS GLU ARG MET ALA ALA ALA LEU ARG GLU SEQRES 19 A 1235 SER PRO GLY ALA SER PHE ARG GLY ILE SER ALA ASP HIS SEQRES 20 A 1235 PHE GLU ALA GLU VAL VAL GLU ARG THR ASP VAL TYR TYR SEQRES 21 A 1235 TYR GLU THR ARG PRO ALA LEU PHE TYR ARG VAL TYR VAL SEQRES 22 A 1235 ARG SER GLY ARG VAL LEU SER TYR LEU CYS ASP ASN PHE SEQRES 23 A 1235 CYS PRO ALA ILE LYS LYS TYR GLU GLY GLY VAL ASP ALA SEQRES 24 A 1235 THR THR ARG PHE ILE LEU ASP ASN PRO GLY PHE VAL THR SEQRES 25 A 1235 PHE GLY TRP TYR ARG LEU LYS PRO GLY ARG ASN ASN THR SEQRES 26 A 1235 LEU ALA GLN PRO ARG ALA PRO MET ALA PHE GLY THR SER SEQRES 27 A 1235 SER ASP VAL GLU PHE ASN CYS THR ALA ASP ASN LEU ALA SEQRES 28 A 1235 ILE GLU GLY GLY MET SER ASP LEU PRO ALA TYR LYS LEU SEQRES 29 A 1235 MET CYS PHE ASP ILE GLU CYS LYS ALA GLY GLY GLU ASP SEQRES 30 A 1235 GLU LEU ALA PHE PRO VAL ALA GLY HIS PRO GLU ASP LEU SEQRES 31 A 1235 VAL ILE GLN ILE SER CYS LEU LEU TYR ASP LEU SER THR SEQRES 32 A 1235 THR ALA LEU GLU HIS VAL LEU LEU PHE SER LEU GLY SER SEQRES 33 A 1235 CYS ASP LEU PRO GLU SER HIS LEU ASN GLU LEU ALA ALA SEQRES 34 A 1235 ARG GLY LEU PRO THR PRO VAL VAL LEU GLU PHE ASP SER SEQRES 35 A 1235 GLU PHE GLU MET LEU LEU ALA PHE MET THR LEU VAL LYS SEQRES 36 A 1235 GLN TYR GLY PRO GLU PHE VAL THR GLY TYR ASN ILE ILE SEQRES 37 A 1235 ASN PHE ASP TRP PRO PHE LEU LEU ALA LYS LEU THR ASP SEQRES 38 A 1235 ILE TYR LYS VAL PRO LEU ASP GLY TYR GLY ARG MET ASN SEQRES 39 A 1235 GLY ARG GLY VAL PHE ARG VAL TRP ASP ILE GLY GLN SER SEQRES 40 A 1235 HIS PHE GLN LYS ARG SER LYS ILE LYS VAL ASN GLY MET SEQRES 41 A 1235 VAL ASN ILE ASP MET TYR GLY ILE ILE THR ASP LYS ILE SEQRES 42 A 1235 LYS LEU SER SER TYR LYS LEU ASN ALA VAL ALA GLU ALA SEQRES 43 A 1235 VAL LEU LYS ASP LYS LYS LYS ASP LEU SER TYR ARG ASP SEQRES 44 A 1235 ILE PRO ALA TYR TYR ALA ALA GLY PRO ALA GLN ARG GLY SEQRES 45 A 1235 VAL ILE GLY GLU TYR CYS ILE GLN ASP SER LEU LEU VAL SEQRES 46 A 1235 GLY GLN LEU PHE PHE LYS PHE LEU PRO HIS LEU GLU LEU SEQRES 47 A 1235 SER ALA VAL ALA ARG LEU ALA GLY ILE ASN ILE THR ARG SEQRES 48 A 1235 THR ILE TYR ASP GLY GLN GLN ILE ARG VAL PHE THR CYS SEQRES 49 A 1235 LEU LEU ARG LEU ALA ASP GLN LYS GLY PHE ILE LEU PRO SEQRES 50 A 1235 ASP THR GLN GLY ARG PHE ARG GLY ALA GLY GLY GLU ALA SEQRES 51 A 1235 PRO LYS ARG PRO ALA ALA ALA ARG GLU ASP GLU GLU ARG SEQRES 52 A 1235 PRO GLU GLU GLU GLY GLU ASP GLU ASP GLU ARG GLU GLU SEQRES 53 A 1235 GLY GLY GLY GLU ARG GLU PRO GLU GLY ALA ARG GLU THR SEQRES 54 A 1235 ALA GLY ARG HIS VAL GLY TYR GLN GLY ALA ARG VAL LEU SEQRES 55 A 1235 ASP PRO THR SER GLY PHE HIS VAL ASN PRO VAL VAL VAL SEQRES 56 A 1235 PHE ASP PHE ALA SER LEU TYR PRO SER ILE ILE GLN ALA SEQRES 57 A 1235 HIS ASN LEU CYS PHE SER THR LEU SER LEU ARG ALA ASP SEQRES 58 A 1235 ALA VAL ALA HIS LEU GLU ALA GLY LYS ASP TYR LEU GLU SEQRES 59 A 1235 ILE GLU VAL GLY GLY ARG ARG LEU PHE PHE VAL LYS ALA SEQRES 60 A 1235 HIS VAL ARG GLU SER LEU LEU SER ILE LEU LEU ARG ASP SEQRES 61 A 1235 TRP LEU ALA MET ARG LYS GLN ILE ARG SER ARG ILE PRO SEQRES 62 A 1235 GLN SER SER PRO GLU GLU ALA VAL LEU LEU ASP LYS GLN SEQRES 63 A 1235 GLN ALA ALA ILE LYS VAL VAL CYS ASN SER VAL TYR GLY SEQRES 64 A 1235 PHE THR GLY VAL GLN HIS GLY LEU LEU PRO CYS LEU HIS SEQRES 65 A 1235 VAL ALA ALA THR VAL THR THR ILE GLY ARG GLU MET LEU SEQRES 66 A 1235 LEU ALA THR ARG GLU TYR VAL HIS ALA ARG TRP ALA ALA SEQRES 67 A 1235 PHE GLU GLN LEU LEU ALA ASP PHE PRO GLU ALA ALA ASP SEQRES 68 A 1235 MET ARG ALA PRO GLY PRO TYR SER MET ARG ILE ILE TYR SEQRES 69 A 1235 GLY ASP THR ASP SER ILE PHE VAL LEU CYS ARG GLY LEU SEQRES 70 A 1235 THR ALA ALA GLY LEU THR ALA VAL GLY ASP LYS MET ALA SEQRES 71 A 1235 SER HIS ILE SER ARG ALA LEU PHE LEU PRO PRO ILE LYS SEQRES 72 A 1235 LEU GLU CYS GLU LYS THR PHE THR LYS LEU LEU LEU ILE SEQRES 73 A 1235 ALA LYS LYS LYS TYR ILE GLY VAL ILE TYR GLY GLY LYS SEQRES 74 A 1235 MET LEU ILE LYS GLY VAL ASP LEU VAL ARG LYS ASN ASN SEQRES 75 A 1235 CYS ALA PHE ILE ASN ARG THR SER ARG ALA LEU VAL ASP SEQRES 76 A 1235 LEU LEU PHE TYR ASP ASP THR VAL SER GLY ALA ALA ALA SEQRES 77 A 1235 ALA LEU ALA GLU ARG PRO ALA GLU GLU TRP LEU ALA ARG SEQRES 78 A 1235 PRO LEU PRO GLU GLY LEU GLN ALA PHE GLY ALA VAL LEU SEQRES 79 A 1235 VAL ASP ALA HIS ARG ARG ILE THR ASP PRO GLU ARG ASP SEQRES 80 A 1235 ILE GLN ASP PHE VAL LEU THR ALA GLU LEU SER ARG HIS SEQRES 81 A 1235 PRO ARG ALA TYR THR ASN LYS ARG LEU ALA HIS LEU THR SEQRES 82 A 1235 VAL TYR TYR LYS LEU MET ALA ARG ARG ALA GLN VAL PRO SEQRES 83 A 1235 SER ILE LYS ASP ARG ILE PRO TYR VAL ILE VAL ALA GLN SEQRES 84 A 1235 THR ARG GLU VAL GLU GLU THR VAL ALA ARG LEU ALA ALA SEQRES 85 A 1235 LEU ARG GLU LEU ASP ALA ALA ALA PRO GLY ASP GLU PRO SEQRES 86 A 1235 ALA PRO PRO ALA ALA LEU PRO SER PRO ALA LYS ARG PRO SEQRES 87 A 1235 ARG GLU THR PRO SER PRO ALA ASP PRO PRO GLY GLY ALA SEQRES 88 A 1235 SER LYS PRO ARG LYS LEU LEU VAL SER GLU LEU ALA GLU SEQRES 89 A 1235 ASP PRO ALA TYR ALA ILE ALA HIS GLY VAL ALA LEU ASN SEQRES 90 A 1235 THR ASP TYR TYR PHE SER HIS LEU LEU GLY ALA ALA CYS SEQRES 91 A 1235 VAL THR PHE LYS ALA LEU PHE GLY ASN ASN ALA LYS ILE SEQRES 92 A 1235 THR GLU SER LEU LEU LYS ARG PHE ILE PRO GLU VAL TRP SEQRES 93 A 1235 HIS PRO PRO ASP ASP VAL ALA ALA ARG LEU ARG THR ALA SEQRES 94 A 1235 GLY PHE GLY ALA VAL GLY ALA GLY ALA THR ALA GLU GLU SEQRES 95 A 1235 THR ARG ARG MET LEU HIS ARG ALA PHE ASP THR LEU ALA SEQRES 1 B 513 MET HIS HIS HIS HIS HIS HIS HIS HIS ASP TYR ASP ILE SEQRES 2 B 513 PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA ASP MET SEQRES 3 B 513 THR ASP SER PRO GLY GLY VAL ALA PRO ALA SER PRO VAL SEQRES 4 B 513 GLU ASP ALA SER ASP ALA SER LEU GLY GLN PRO GLU GLU SEQRES 5 B 513 GLY ALA PRO CYS GLN VAL VAL LEU GLN GLY ALA GLU LEU SEQRES 6 B 513 ASN GLY ILE LEU GLN ALA PHE ALA PRO LEU ARG THR SER SEQRES 7 B 513 LEU LEU ASP SER LEU LEU VAL MET GLY ASP ARG GLY ILE SEQRES 8 B 513 LEU ILE HIS ASN THR ILE PHE GLY GLU GLN VAL PHE LEU SEQRES 9 B 513 PRO LEU GLU HIS SER GLN PHE SER ARG TYR ARG TRP ARG SEQRES 10 B 513 GLY PRO THR ALA ALA PHE LEU SER LEU VAL ASP GLN LYS SEQRES 11 B 513 ARG SER LEU LEU SER VAL PHE ARG ALA ASN GLN TYR PRO SEQRES 12 B 513 ASP LEU ARG ARG VAL GLU LEU ALA ILE THR GLY GLN ALA SEQRES 13 B 513 PRO PHE ARG THR LEU VAL GLN ARG ILE TRP THR THR THR SEQRES 14 B 513 SER ASP GLY GLU ALA VAL GLU LEU ALA SER GLU THR LEU SEQRES 15 B 513 MET LYS ARG GLU LEU THR SER PHE VAL VAL LEU VAL PRO SEQRES 16 B 513 GLN GLY THR PRO ASP VAL GLN LEU ARG LEU THR ARG PRO SEQRES 17 B 513 GLN LEU THR LYS VAL LEU ASN ALA THR GLY ALA ASP SER SEQRES 18 B 513 ALA THR PRO THR THR PHE GLU LEU GLY VAL ASN GLY LYS SEQRES 19 B 513 PHE SER VAL PHE THR THR SER THR CYS VAL THR PHE ALA SEQRES 20 B 513 ALA ARG GLU GLU GLY VAL SER SER SER THR SER THR GLN SEQRES 21 B 513 VAL GLN ILE LEU SER ASN ALA LEU THR LYS ALA GLY GLN SEQRES 22 B 513 ALA ALA ALA ASN ALA LYS THR VAL TYR GLY GLU ASN THR SEQRES 23 B 513 HIS ARG THR PHE SER VAL VAL VAL ASP ASP CYS SER MET SEQRES 24 B 513 ARG ALA VAL LEU ARG ARG LEU GLN VAL GLY GLY GLY THR SEQRES 25 B 513 LEU LYS PHE PHE LEU THR THR PRO VAL PRO SER LEU CYS SEQRES 26 B 513 VAL THR ALA THR GLY PRO ASN ALA VAL SER ALA VAL PHE SEQRES 27 B 513 LEU LEU LYS PRO GLN LYS ILE CYS LEU ASP TRP LEU GLY SEQRES 28 B 513 HIS SER GLN GLY SER PRO SER ALA GLY SER SER ALA SER SEQRES 29 B 513 ARG ALA SER GLY SER GLU PRO THR ASP SER GLN ASP SER SEQRES 30 B 513 ALA SER ASP ALA VAL SER HIS GLY ASP PRO GLU ASP LEU SEQRES 31 B 513 ASP GLY ALA ALA ARG ALA GLY GLU ALA GLY ALA LEU HIS SEQRES 32 B 513 ALA CYS PRO MET PRO SER SER THR THR ARG VAL THR PRO SEQRES 33 B 513 THR THR LYS ARG GLY ARG SER GLY GLY GLU ASP ALA ARG SEQRES 34 B 513 ALA ASP THR ALA LEU LYS LYS PRO LYS THR GLY SER PRO SEQRES 35 B 513 THR ALA PRO PRO PRO ALA ASP PRO VAL PRO LEU ASP THR SEQRES 36 B 513 GLU ASP ASP SER ASP ALA ALA ASP GLY THR ALA ALA ARG SEQRES 37 B 513 PRO ALA ALA PRO ASP ALA ARG SER GLY SER ARG TYR ALA SEQRES 38 B 513 CYS TYR PHE ARG ASP LEU PRO THR GLY GLU ALA SER PRO SEQRES 39 B 513 GLY ALA PHE SER ALA PHE ARG GLY GLY PRO GLN THR PRO SEQRES 40 B 513 TYR GLY PHE GLY PHE PRO SEQRES 1 T 27 DA DA DT DC DG DT DA DG DG DG DG DA DA SEQRES 2 T 27 DG DG DA DT DC DG DT DA DT DG DG DC DC SEQRES 3 T 27 DT SEQRES 1 P 23 DA DG DG DC DC DA DT DA DC DG DA DT DC SEQRES 2 P 23 DC DT DT DC DC DC DC DT DA DC HET CA A1301 1 HET CA A1302 1 HET CA A1303 1 HET AVP T 101 28 HETNAM CA CALCIUM ION HETNAM AVP ACYCLOVIR TRIPHOSPHATE FORMUL 5 CA 3(CA 2+) FORMUL 8 AVP C8 H14 N5 O12 P3 HELIX 1 AA1 PRO A 87 ARG A 91 5 5 HELIX 2 AA2 HIS A 158 ARG A 163 1 6 HELIX 3 AA3 ALA A 169 ALA A 174 1 6 HELIX 4 AA4 LYS A 209 LEU A 216 1 8 HELIX 5 AA5 ALA A 220 GLU A 234 1 15 HELIX 6 AA6 SER A 244 ASP A 246 5 3 HELIX 7 AA7 GLY A 276 PHE A 286 1 11 HELIX 8 AA8 ASP A 298 ASN A 307 1 10 HELIX 9 AA9 ALA A 331 PHE A 335 5 5 HELIX 10 AB1 PRO A 420 ARG A 430 1 11 HELIX 11 AB2 SER A 442 GLY A 458 1 17 HELIX 12 AB3 PHE A 470 ILE A 482 1 13 HELIX 13 AB4 MET A 525 ASP A 531 1 7 HELIX 14 AB5 LYS A 539 VAL A 547 1 9 HELIX 15 AB6 ASP A 559 GLY A 567 1 9 HELIX 16 AB7 GLY A 567 LEU A 593 1 27 HELIX 17 AB8 LEU A 593 GLY A 606 1 14 HELIX 18 AB9 ASN A 608 ASP A 615 1 8 HELIX 19 AC1 GLN A 617 LYS A 632 1 16 HELIX 20 AC2 SER A 720 ASN A 730 1 11 HELIX 21 AC3 SER A 772 SER A 790 1 19 HELIX 22 AC4 GLU A 799 GLY A 822 1 24 HELIX 23 AC5 CYS A 830 TRP A 856 1 27 HELIX 24 AC6 GLU A 860 PHE A 866 1 7 HELIX 25 AC7 PRO A 867 ASP A 871 5 5 HELIX 26 AC8 THR A 898 LEU A 902 5 5 HELIX 27 AC9 THR A 903 PHE A 918 1 16 HELIX 28 AD1 VAL A 955 ARG A 959 5 5 HELIX 29 AD2 CYS A 963 ASP A 980 1 18 HELIX 30 AD3 ASP A 980 ALA A 991 1 12 HELIX 31 AD4 PRO A 994 LEU A 999 1 6 HELIX 32 AD5 GLN A 1008 THR A 1022 1 15 HELIX 33 AD6 ASP A 1027 VAL A 1032 5 6 HELIX 34 AD7 HIS A 1040 TYR A 1044 5 5 HELIX 35 AD8 HIS A 1051 ARG A 1061 1 11 HELIX 36 AD9 THR A 1080 GLU A 1095 1 16 HELIX 37 AE1 ASP A 1145 GLY A 1153 1 9 HELIX 38 AE2 ASN A 1157 LYS A 1174 1 18 HELIX 39 AE3 ALA A 1175 GLY A 1178 5 4 HELIX 40 AE4 ASN A 1180 ILE A 1192 1 13 HELIX 41 AE5 VAL A 1202 ALA A 1209 1 8 HELIX 42 AE6 GLU A 1221 ALA A 1235 1 15 HELIX 43 AE7 GLN B 36 ALA B 48 1 13 HELIX 44 AE8 SER B 84 PHE B 86 5 3 HELIX 45 AE9 SER B 107 PHE B 112 5 6 HELIX 46 AF1 THR B 181 PRO B 183 5 3 HELIX 47 AF2 GLN B 184 LEU B 189 1 6 HELIX 48 AF3 ARG B 275 LEU B 281 1 7 SHEET 1 AA1 2 GLU A 73 ARG A 75 0 SHEET 2 AA1 2 HIS A 98 LYS A 100 -1 O LEU A 99 N PHE A 74 SHEET 1 AA2 2 ALA A 78 PRO A 79 0 SHEET 2 AA2 2 VAL A 94 HIS A 95 -1 O HIS A 95 N ALA A 78 SHEET 1 AA3 2 LYS A 104 CYS A 107 0 SHEET 2 AA3 2 ASP A 110 ASP A 113 -1 O ARG A 112 N VAL A 105 SHEET 1 AA4 7 GLN A 328 PRO A 329 0 SHEET 2 AA4 7 VAL A 341 THR A 346 -1 O ASN A 344 N GLN A 328 SHEET 3 AA4 7 ARG A 193 TYR A 199 1 N HIS A 197 O CYS A 345 SHEET 4 AA4 7 GLY A 179 LEU A 187 -1 N LEU A 184 O VAL A 196 SHEET 5 AA4 7 VAL A 146 GLU A 157 -1 N LEU A 153 O THR A 183 SHEET 6 AA4 7 GLY A 314 LEU A 318 -1 O TYR A 316 N PHE A 147 SHEET 7 AA4 7 LEU A 350 ILE A 352 -1 O ALA A 351 N ARG A 317 SHEET 1 AA5 5 LYS A 292 TYR A 293 0 SHEET 2 AA5 5 GLN A 203 ASN A 208 -1 N TYR A 206 O TYR A 293 SHEET 3 AA5 5 ALA A 266 VAL A 273 -1 O VAL A 271 N PHE A 205 SHEET 4 AA5 5 PHE A 248 ASP A 257 -1 N ARG A 255 O ALA A 266 SHEET 5 AA5 5 PHE A 634 ILE A 635 1 O ILE A 635 N THR A 256 SHEET 1 AA6 6 VAL A 436 PHE A 440 0 SHEET 2 AA6 6 LEU A 406 LEU A 414 1 N SER A 413 O LEU A 438 SHEET 3 AA6 6 LEU A 390 ASP A 400 -1 N CYS A 396 O LEU A 410 SHEET 4 AA6 6 LYS A 363 LYS A 372 -1 N CYS A 366 O LEU A 397 SHEET 5 AA6 6 PHE A 461 GLY A 464 1 O THR A 463 N MET A 365 SHEET 6 AA6 6 VAL A 521 ASP A 524 1 O VAL A 521 N VAL A 462 SHEET 1 AA7 2 PHE A 499 TRP A 502 0 SHEET 2 AA7 2 LYS A 514 VAL A 517 -1 O LYS A 516 N ARG A 500 SHEET 1 AA8 5 GLY A 707 HIS A 709 0 SHEET 2 AA8 5 LEU A 924 ALA A 937 -1 O LEU A 933 N HIS A 709 SHEET 3 AA8 5 VAL A 713 PHE A 718 -1 N VAL A 713 O PHE A 930 SHEET 4 AA8 5 SER A 889 LEU A 893 -1 O VAL A 892 N VAL A 714 SHEET 5 AA8 5 ARG A 881 ASP A 886 -1 N TYR A 884 O PHE A 891 SHEET 1 AA9 4 GLY A 707 HIS A 709 0 SHEET 2 AA9 4 LEU A 924 ALA A 937 -1 O LEU A 933 N HIS A 709 SHEET 3 AA9 4 LYS A 940 ILE A 945 -1 O VAL A 944 N THR A 931 SHEET 4 AA9 4 MET A 950 LYS A 953 -1 O LEU A 951 N GLY A 943 SHEET 1 AB1 2 TYR A 752 VAL A 757 0 SHEET 2 AB1 2 ARG A 760 VAL A 765 -1 O ARG A 760 N VAL A 757 SHEET 1 AB2 3 LEU A1033 GLU A1036 0 SHEET 2 AB2 3 ARG A1071 ILE A1076 -1 O TYR A1074 N LEU A1033 SHEET 3 AB2 3 ALA A1143 GLU A1144 -1 O GLU A1144 N VAL A1075 SHEET 1 AB3 2 PHE A1211 GLY A1215 0 SHEET 2 AB3 2 VAL B 166 PRO B 170 -1 O VAL B 169 N GLY A1212 SHEET 1 AB4 4 VAL B 33 LEU B 35 0 SHEET 2 AB4 4 VAL B 123 THR B 128 -1 O VAL B 123 N LEU B 35 SHEET 3 AB4 4 THR B 135 ILE B 140 -1 O THR B 135 N THR B 128 SHEET 4 AB4 4 LEU B 157 ARG B 160 -1 O LYS B 159 N LEU B 136 SHEET 1 AB5 7 ALA B 96 LEU B 99 0 SHEET 2 AB5 7 LEU B 58 MET B 61 -1 N MET B 61 O ALA B 96 SHEET 3 AB5 7 GLY B 65 ILE B 72 -1 O LEU B 67 N VAL B 60 SHEET 4 AB5 7 GLU B 75 GLU B 82 -1 O VAL B 77 N ASN B 70 SHEET 5 AB5 7 SER B 310 LEU B 314 -1 O SER B 310 N PHE B 78 SHEET 6 AB5 7 SER B 298 ALA B 303 -1 N VAL B 301 O ALA B 311 SHEET 7 AB5 7 GLY B 286 PHE B 290 -1 N LYS B 289 O CYS B 300 SHEET 1 AB6 2 GLN B 177 LEU B 178 0 SHEET 2 AB6 2 GLY B 258 GLU B 259 -1 O GLU B 259 N GLN B 177 LINK OD1 ASP A 368 CA CA A1303 1555 1555 3.17 LINK OD1 ASP A 717 CA CA A1301 1555 1555 3.09 LINK OD2 ASP A 717 CA CA A1301 1555 1555 2.32 LINK O PHE A 718 CA CA A1301 1555 1555 2.45 LINK OD2 ASP A 888 CA CA A1301 1555 1555 2.37 LINK CA CA A1301 O2B AVP T 101 1555 1555 2.36 LINK CA CA A1301 O1A AVP T 101 1555 1555 2.66 LINK CA CA A1301 O3G AVP T 101 1555 1555 2.35 CISPEP 1 PRO A 920 PRO A 921 0 2.10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 8445 ALA A1235 TER 10504 LYS B 319 TER 11047 DT T 13 TER 11466 DC P 1 HETATM11467 CA CA A1301 160.058 130.132 144.326 1.00 53.35 CA HETATM11468 CA CA A1302 159.384 171.474 137.403 1.00 73.59 CA HETATM11469 CA CA A1303 160.659 168.600 137.793 1.00 68.22 CA HETATM11470 PA AVP T 101 158.886 133.776 143.729 1.00 39.16 P HETATM11471 O1A AVP T 101 159.763 132.771 144.365 1.00 39.16 O HETATM11472 O2A AVP T 101 159.101 135.210 144.013 1.00 39.16 O HETATM11473 O5' AVP T 101 157.355 133.417 144.057 1.00 39.16 O HETATM11474 C5' AVP T 101 156.938 132.088 144.380 1.00 39.16 C HETATM11475 C4' AVP T 101 155.410 132.067 144.466 1.00 39.16 C HETATM11476 O4' AVP T 101 154.863 132.453 143.203 1.00 39.16 O HETATM11477 C1' AVP T 101 153.684 133.244 143.370 1.00 39.16 C HETATM11478 N9 AVP T 101 153.947 134.638 142.952 1.00 39.16 N HETATM11479 C4 AVP T 101 153.153 135.418 142.223 1.00 39.16 C HETATM11480 N3 AVP T 101 151.947 135.194 141.677 1.00 39.16 N HETATM11481 C2 AVP T 101 151.329 136.148 140.968 1.00 39.16 C HETATM11482 N2 AVP T 101 150.134 135.925 140.430 1.00 39.16 N HETATM11483 N1 AVP T 101 151.949 137.383 140.797 1.00 39.16 N HETATM11484 C6 AVP T 101 153.201 137.576 141.378 1.00 39.16 C HETATM11485 O6 AVP T 101 153.769 138.658 141.242 1.00 39.16 O HETATM11486 C5 AVP T 101 153.767 136.592 142.071 1.00 39.16 C HETATM11487 N7 AVP T 101 154.932 136.531 142.708 1.00 39.16 N HETATM11488 C8 AVP T 101 155.044 135.324 143.252 1.00 39.16 C HETATM11489 O3A AVP T 101 158.915 133.578 142.125 1.00 39.16 O HETATM11490 PB AVP T 101 159.342 132.201 141.413 1.00 39.16 P HETATM11491 O1B AVP T 101 158.660 132.153 140.104 1.00 39.16 O HETATM11492 O2B AVP T 101 159.171 131.071 142.348 1.00 39.16 O HETATM11493 O3B AVP T 101 160.920 132.456 141.112 1.00 39.16 O HETATM11494 PG AVP T 101 162.139 132.145 142.101 1.00 39.16 P HETATM11495 O1G AVP T 101 162.238 133.430 142.827 1.00 39.16 O HETATM11496 O2G AVP T 101 163.251 131.888 141.176 1.00 39.16 O HETATM11497 O3G AVP T 101 161.730 131.009 142.934 1.00 39.16 O CONECT 245411469 CONECT 477911467 CONECT 478011467 CONECT 478411467 CONECT 611311467 CONECT11467 4779 4780 4784 6113 CONECT11467114711149211497 CONECT11469 2454 CONECT1147011471114721147311489 CONECT114711146711470 CONECT1147211470 CONECT114731147011474 CONECT114741147311475 CONECT114751147411476 CONECT114761147511477 CONECT114771147611478 CONECT11478114771147911488 CONECT11479114781148011486 CONECT114801147911481 CONECT11481114801148211483 CONECT1148211481 CONECT114831148111484 CONECT11484114831148511486 CONECT1148511484 CONECT11486114791148411487 CONECT114871148611488 CONECT114881147811487 CONECT114891147011490 CONECT1149011489114911149211493 CONECT1149111490 CONECT114921146711490 CONECT114931149011494 CONECT1149411493114951149611497 CONECT1149511494 CONECT1149611494 CONECT114971146711494 MASTER 627 0 4 48 55 0 0 611493 4 36 140 END