HEADER LIGASE 28-AUG-24 9JC7 TITLE CRYSTAL STRUCTURE OF ALANYL-TRNA SYNTHETASE IN COMPLEX WITH ATP AND L- TITLE 2 ALANINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALANINE--TRNA LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ALANYL-TRNA SYNTHETASE,ALARS; COMPND 5 EC: 6.1.1.7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHYLOMONAS SP. DH-1; SOURCE 3 ORGANISM_TAXID: 1727196; SOURCE 4 STRAIN: DH-1; SOURCE 5 GENE: ALAS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR S.Y.SON,S.S.CHA REVDAT 2 25-JUN-25 9JC7 1 JRNL REVDAT 1 18-JUN-25 9JC7 0 JRNL AUTH W.PARK,S.Y.SON,J.YI,S.CHA,H.MOON,M.KIM,S.JI,W.YU,C.SUNG, JRNL AUTH 2 S.S.CHA,J.S.HAHN JRNL TITL UNLOCKING THE SERINE MISCHARGING PARADOX AND INHIBITING JRNL TITL 2 LACTYLTRANSFERASE ACTIVITY OF ALARS BY A SINGLE-POINT JRNL TITL 3 MUTATION. JRNL REF NUCLEIC ACIDS RES. V. 53 2025 JRNL REFN ESSN 1362-4962 JRNL PMID 40479712 JRNL DOI 10.1093/NAR/GKAF462 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.348 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 83638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.389 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8000 - 4.5741 1.00 6018 148 0.1657 0.1767 REMARK 3 2 4.5741 - 3.6327 1.00 5922 144 0.1714 0.2346 REMARK 3 3 3.6327 - 3.1741 1.00 5846 143 0.2005 0.2265 REMARK 3 4 3.1741 - 2.8841 1.00 5822 143 0.2017 0.2111 REMARK 3 5 2.8841 - 2.6776 1.00 5821 142 0.2071 0.2568 REMARK 3 6 2.6776 - 2.5198 1.00 5801 142 0.2013 0.2169 REMARK 3 7 2.5198 - 2.3936 1.00 5840 144 0.2064 0.2309 REMARK 3 8 2.3936 - 2.2895 1.00 5805 141 0.2077 0.2289 REMARK 3 9 2.2895 - 2.2014 1.00 5811 143 0.2205 0.2775 REMARK 3 10 2.2014 - 2.1254 1.00 5758 141 0.2275 0.2530 REMARK 3 11 2.1254 - 2.0590 1.00 5785 141 0.2411 0.2759 REMARK 3 12 2.0590 - 2.0002 1.00 5818 143 0.2608 0.2785 REMARK 3 13 2.0002 - 1.9475 1.00 5828 143 0.2739 0.3064 REMARK 3 14 1.9475 - 1.9000 1.00 5765 140 0.2898 0.3072 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.217 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 7001 REMARK 3 ANGLE : 0.943 9456 REMARK 3 CHIRALITY : 0.056 996 REMARK 3 PLANARITY : 0.006 1245 REMARK 3 DIHEDRAL : 11.851 4107 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'B' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9JC7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1300050871. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83655 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.10200 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.11.1_2575 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 3350, 2% V/V TACSIMATETM REMARK 280 PH5.0, 100 MM SODIUM CITRATE TRIBASIC DIHYDRATE PH5.0, REMARK 280 MICROBATCH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.79500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 426 REMARK 465 ALA A 427 REMARK 465 GLY A 428 REMARK 465 GLY A 429 REMARK 465 HIS A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 ARG B 426 REMARK 465 ALA B 427 REMARK 465 GLY B 428 REMARK 465 GLY B 429 REMARK 465 HIS B 430 REMARK 465 HIS B 431 REMARK 465 HIS B 432 REMARK 465 HIS B 433 REMARK 465 HIS B 434 REMARK 465 HIS B 435 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 173 O HOH A 601 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 31 59.11 -113.76 REMARK 500 ASP A 32 84.22 -173.27 REMARK 500 HIS A 73 -75.04 47.75 REMARK 500 ASN A 74 103.79 58.72 REMARK 500 ASP A 99 -104.95 -112.17 REMARK 500 PHE A 101 -134.35 -139.30 REMARK 500 GLU A 142 -63.26 -97.36 REMARK 500 ARG A 149 61.66 -114.33 REMARK 500 ASN B 31 59.16 -113.75 REMARK 500 ASP B 32 89.04 -173.06 REMARK 500 ASP B 99 -105.53 -111.15 REMARK 500 PHE B 101 -134.47 -142.41 REMARK 500 GLU B 142 -63.63 -97.17 REMARK 500 LYS B 144 47.39 70.50 REMARK 500 ARG B 149 61.34 -114.79 REMARK 500 PHE B 319 -31.06 -138.40 REMARK 500 REMARK 500 REMARK: NULL DBREF1 9JC7 A 1 429 UNP A0A172UEB3_METSD DBREF2 9JC7 A A0A172UEB3 1 429 DBREF1 9JC7 B 1 429 UNP A0A172UEB3_METSD DBREF2 9JC7 B A0A172UEB3 1 429 SEQADV 9JC7 HIS A 430 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS A 431 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS A 432 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS A 433 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS A 434 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS A 435 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS B 430 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS B 431 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS B 432 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS B 433 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS B 434 UNP A0A172UEB EXPRESSION TAG SEQADV 9JC7 HIS B 435 UNP A0A172UEB EXPRESSION TAG SEQRES 1 A 435 MET THR SER ALA GLU ILE ARG ALA ALA PHE LEU GLU PHE SEQRES 2 A 435 PHE ARG GLN ARG GLY HIS ALA VAL ARG PRO SER SER SER SEQRES 3 A 435 LEU VAL PRO GLY ASN ASP PRO THR LEU LEU PHE THR ASN SEQRES 4 A 435 ALA GLY MET VAL GLN PHE LYS ASP VAL PHE LEU GLY ARG SEQRES 5 A 435 GLU LYS VAL ASP PHE ASN ARG ALA ALA THR SER GLN ARG SEQRES 6 A 435 CYS VAL ARG ALA GLY GLY LYS HIS ASN ASP LEU GLU ASN SEQRES 7 A 435 VAL GLY TYR THR ALA ARG HIS HIS THR PHE PHE GLU MET SEQRES 8 A 435 LEU GLY ASN PHE SER PHE GLY ASP TYR PHE LYS ARG ASP SEQRES 9 A 435 ALA ILE ASN PHE ALA TRP ASP PHE LEU THR LYS GLU MET SEQRES 10 A 435 GLY ILE PRO PRO ALA LYS LEU TRP VAL THR VAL PHE ASP SEQRES 11 A 435 GLU ASP SER GLU ALA GLU ALA ILE TRP LEU GLU GLU VAL SEQRES 12 A 435 LYS ILE ASP PRO THR ARG PHE SER ARG ILE GLY ALA LYS SEQRES 13 A 435 ASP ASN PHE TRP ALA MET GLY ASP VAL GLY PRO CYS GLY SEQRES 14 A 435 PRO CYS THR GLU ILE PHE TYR ASP HIS GLY GLU HIS VAL SEQRES 15 A 435 ALA GLY GLY PRO PRO GLY SER PRO ASP GLU ASP GLY ASP SEQRES 16 A 435 ARG TYR ILE GLU ILE TRP ASN LEU VAL PHE MET GLN TYR SEQRES 17 A 435 GLU ARG ASP LYS ASP GLY ASN LEU THR PRO LEU PRO ALA SEQRES 18 A 435 PRO SER VAL ASP THR GLY MET GLY LEU GLU ARG ILE ALA SEQRES 19 A 435 ALA VAL MET GLN GLY VAL HIS SER ASN TYR GLU ILE ASP SEQRES 20 A 435 ILE PHE GLN ASN LEU VAL LYS THR ALA ALA ALA LEU ALA SEQRES 21 A 435 GLY THR THR ASP LEU SER ASN SER SER LEU ARG VAL ILE SEQRES 22 A 435 ALA ASP HIS ILE ARG SER CYS ALA PHE LEU VAL ALA ASP SEQRES 23 A 435 GLY VAL LEU PRO SER ASN GLU GLY ARG GLY TYR VAL LEU SEQRES 24 A 435 ARG ARG ILE VAL ARG ARG ALA ILE ARG HIS GLY TYR ARG SEQRES 25 A 435 LEU GLY ILE GLN ASP THR PHE PHE TYR LYS LEU VAL ALA SEQRES 26 A 435 PRO LEU ALA ALA GLU MET GLY ALA ALA TYR PRO GLU LEU SEQRES 27 A 435 VAL LYS ALA GLN GLU GLN VAL GLU ARG VAL LEU LYS LYS SEQRES 28 A 435 GLU GLU GLU ARG PHE ALA GLU THR LEU GLY GLN GLY MET SEQRES 29 A 435 LYS ILE LEU GLU ASN CYS VAL ALA LYS LEU ASP GLY HIS SEQRES 30 A 435 VAL ILE PRO GLY ASP VAL VAL PHE LEU LEU TYR ASP THR SEQRES 31 A 435 TYR GLY PHE PRO VAL ASP LEU THR ALA ASP PHE ALA ARG SEQRES 32 A 435 GLU HIS ASN LEU SER VAL ASP HIS ALA GLY PHE GLU VAL SEQRES 33 A 435 GLU MET SER ALA GLN ARG ASP ARG ALA ARG ALA GLY GLY SEQRES 34 A 435 HIS HIS HIS HIS HIS HIS SEQRES 1 B 435 MET THR SER ALA GLU ILE ARG ALA ALA PHE LEU GLU PHE SEQRES 2 B 435 PHE ARG GLN ARG GLY HIS ALA VAL ARG PRO SER SER SER SEQRES 3 B 435 LEU VAL PRO GLY ASN ASP PRO THR LEU LEU PHE THR ASN SEQRES 4 B 435 ALA GLY MET VAL GLN PHE LYS ASP VAL PHE LEU GLY ARG SEQRES 5 B 435 GLU LYS VAL ASP PHE ASN ARG ALA ALA THR SER GLN ARG SEQRES 6 B 435 CYS VAL ARG ALA GLY GLY LYS HIS ASN ASP LEU GLU ASN SEQRES 7 B 435 VAL GLY TYR THR ALA ARG HIS HIS THR PHE PHE GLU MET SEQRES 8 B 435 LEU GLY ASN PHE SER PHE GLY ASP TYR PHE LYS ARG ASP SEQRES 9 B 435 ALA ILE ASN PHE ALA TRP ASP PHE LEU THR LYS GLU MET SEQRES 10 B 435 GLY ILE PRO PRO ALA LYS LEU TRP VAL THR VAL PHE ASP SEQRES 11 B 435 GLU ASP SER GLU ALA GLU ALA ILE TRP LEU GLU GLU VAL SEQRES 12 B 435 LYS ILE ASP PRO THR ARG PHE SER ARG ILE GLY ALA LYS SEQRES 13 B 435 ASP ASN PHE TRP ALA MET GLY ASP VAL GLY PRO CYS GLY SEQRES 14 B 435 PRO CYS THR GLU ILE PHE TYR ASP HIS GLY GLU HIS VAL SEQRES 15 B 435 ALA GLY GLY PRO PRO GLY SER PRO ASP GLU ASP GLY ASP SEQRES 16 B 435 ARG TYR ILE GLU ILE TRP ASN LEU VAL PHE MET GLN TYR SEQRES 17 B 435 GLU ARG ASP LYS ASP GLY ASN LEU THR PRO LEU PRO ALA SEQRES 18 B 435 PRO SER VAL ASP THR GLY MET GLY LEU GLU ARG ILE ALA SEQRES 19 B 435 ALA VAL MET GLN GLY VAL HIS SER ASN TYR GLU ILE ASP SEQRES 20 B 435 ILE PHE GLN ASN LEU VAL LYS THR ALA ALA ALA LEU ALA SEQRES 21 B 435 GLY THR THR ASP LEU SER ASN SER SER LEU ARG VAL ILE SEQRES 22 B 435 ALA ASP HIS ILE ARG SER CYS ALA PHE LEU VAL ALA ASP SEQRES 23 B 435 GLY VAL LEU PRO SER ASN GLU GLY ARG GLY TYR VAL LEU SEQRES 24 B 435 ARG ARG ILE VAL ARG ARG ALA ILE ARG HIS GLY TYR ARG SEQRES 25 B 435 LEU GLY ILE GLN ASP THR PHE PHE TYR LYS LEU VAL ALA SEQRES 26 B 435 PRO LEU ALA ALA GLU MET GLY ALA ALA TYR PRO GLU LEU SEQRES 27 B 435 VAL LYS ALA GLN GLU GLN VAL GLU ARG VAL LEU LYS LYS SEQRES 28 B 435 GLU GLU GLU ARG PHE ALA GLU THR LEU GLY GLN GLY MET SEQRES 29 B 435 LYS ILE LEU GLU ASN CYS VAL ALA LYS LEU ASP GLY HIS SEQRES 30 B 435 VAL ILE PRO GLY ASP VAL VAL PHE LEU LEU TYR ASP THR SEQRES 31 B 435 TYR GLY PHE PRO VAL ASP LEU THR ALA ASP PHE ALA ARG SEQRES 32 B 435 GLU HIS ASN LEU SER VAL ASP HIS ALA GLY PHE GLU VAL SEQRES 33 B 435 GLU MET SER ALA GLN ARG ASP ARG ALA ARG ALA GLY GLY SEQRES 34 B 435 HIS HIS HIS HIS HIS HIS HET ATP A 501 31 HET ALA A 502 6 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET EDO A 506 4 HET FMT A 507 3 HET EDO A 508 4 HET MLT A 509 9 HET EDO A 510 4 HET EDO A 511 4 HET ATP B 501 31 HET ALA B 502 6 HET FMT B 503 3 HET FMT B 504 3 HET CIT B 505 13 HET EDO B 506 4 HET EDO B 507 4 HET EDO B 508 4 HET EDO B 509 4 HET EDO B 510 4 HET EDO B 511 4 HET EDO B 512 4 HET EDO B 513 4 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM ALA ALANINE HETNAM EDO 1,2-ETHANEDIOL HETNAM FMT FORMIC ACID HETNAM MLT D-MALATE HETNAM CIT CITRIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN MLT (2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 4 ALA 2(C3 H7 N O2) FORMUL 5 EDO 15(C2 H6 O2) FORMUL 9 FMT 3(C H2 O2) FORMUL 11 MLT C4 H6 O5 FORMUL 18 CIT C6 H8 O7 FORMUL 27 HOH *196(H2 O) HELIX 1 AA1 THR A 2 ARG A 17 1 16 HELIX 2 AA2 MET A 42 GLN A 44 5 3 HELIX 3 AA3 PHE A 45 LEU A 50 1 6 HELIX 4 AA4 ASP A 75 VAL A 79 5 5 HELIX 5 AA5 PHE A 101 LYS A 115 1 15 HELIX 6 AA6 PRO A 120 ALA A 122 5 3 HELIX 7 AA7 ASP A 132 GLU A 142 1 11 HELIX 8 AA8 GLY A 154 ASN A 158 1 5 HELIX 9 AA9 LEU A 230 GLN A 238 1 9 HELIX 10 AB1 SER A 242 GLU A 245 5 4 HELIX 11 AB2 ILE A 246 GLY A 261 1 16 HELIX 12 AB3 ASN A 267 ASP A 286 1 20 HELIX 13 AB4 GLU A 293 LEU A 313 1 21 HELIX 14 AB5 PHE A 319 LYS A 322 5 4 HELIX 15 AB6 LEU A 323 GLY A 332 1 10 HELIX 16 AB7 TYR A 335 ALA A 341 1 7 HELIX 17 AB8 ALA A 341 LEU A 374 1 34 HELIX 18 AB9 PRO A 380 THR A 390 1 11 HELIX 19 AC1 PRO A 394 HIS A 405 1 12 HELIX 20 AC2 ASP A 410 ALA A 425 1 16 HELIX 21 AC3 THR B 2 ARG B 17 1 16 HELIX 22 AC4 MET B 42 GLN B 44 5 3 HELIX 23 AC5 PHE B 45 LEU B 50 1 6 HELIX 24 AC6 ASP B 75 VAL B 79 5 5 HELIX 25 AC7 PHE B 101 LYS B 115 1 15 HELIX 26 AC8 PRO B 120 ALA B 122 5 3 HELIX 27 AC9 ASP B 132 GLU B 142 1 11 HELIX 28 AD1 GLY B 154 ASN B 158 1 5 HELIX 29 AD2 LEU B 230 GLN B 238 1 9 HELIX 30 AD3 SER B 242 GLU B 245 5 4 HELIX 31 AD4 ILE B 246 GLY B 261 1 16 HELIX 32 AD5 ASN B 267 ASP B 286 1 20 HELIX 33 AD6 GLU B 293 LEU B 313 1 21 HELIX 34 AD7 PHE B 319 LYS B 322 5 4 HELIX 35 AD8 LEU B 323 GLY B 332 1 10 HELIX 36 AD9 TYR B 335 ALA B 341 1 7 HELIX 37 AE1 ALA B 341 LEU B 374 1 34 HELIX 38 AE2 PRO B 380 THR B 390 1 11 HELIX 39 AE3 PRO B 394 GLU B 404 1 11 HELIX 40 AE4 ASP B 410 ALA B 425 1 16 SHEET 1 AA1 8 ALA A 20 VAL A 21 0 SHEET 2 AA1 8 ARG A 59 VAL A 67 1 O ARG A 59 N ALA A 20 SHEET 3 AA1 8 PHE A 88 SER A 96 -1 O MET A 91 N GLN A 64 SHEET 4 AA1 8 LEU A 216 GLY A 229 -1 O MET A 228 N LEU A 92 SHEET 5 AA1 8 TYR A 197 ARG A 210 -1 N VAL A 204 O ASP A 225 SHEET 6 AA1 8 GLY A 166 ASP A 177 -1 N THR A 172 O LEU A 203 SHEET 7 AA1 8 LEU A 124 PHE A 129 -1 N TRP A 125 O PHE A 175 SHEET 8 AA1 8 PHE A 150 ILE A 153 1 O ILE A 153 N VAL A 128 SHEET 1 AA2 7 ALA A 20 VAL A 21 0 SHEET 2 AA2 7 ARG A 59 VAL A 67 1 O ARG A 59 N ALA A 20 SHEET 3 AA2 7 PHE A 88 SER A 96 -1 O MET A 91 N GLN A 64 SHEET 4 AA2 7 LEU A 216 GLY A 229 -1 O MET A 228 N LEU A 92 SHEET 5 AA2 7 TYR A 197 ARG A 210 -1 N VAL A 204 O ASP A 225 SHEET 6 AA2 7 GLY A 166 ASP A 177 -1 N THR A 172 O LEU A 203 SHEET 7 AA2 7 PHE A 159 ALA A 161 -1 N TRP A 160 O GLY A 169 SHEET 1 AA3 2 VAL A 378 ILE A 379 0 SHEET 2 AA3 2 SER A 408 VAL A 409 1 O SER A 408 N ILE A 379 SHEET 1 AA4 8 ALA B 20 VAL B 21 0 SHEET 2 AA4 8 ARG B 59 VAL B 67 1 O ARG B 59 N ALA B 20 SHEET 3 AA4 8 PHE B 88 SER B 96 -1 O PHE B 89 N CYS B 66 SHEET 4 AA4 8 LEU B 216 GLY B 229 -1 O MET B 228 N LEU B 92 SHEET 5 AA4 8 TYR B 197 ARG B 210 -1 N VAL B 204 O ASP B 225 SHEET 6 AA4 8 GLY B 166 ASP B 177 -1 N CYS B 168 O TYR B 208 SHEET 7 AA4 8 LEU B 124 PHE B 129 -1 N TRP B 125 O PHE B 175 SHEET 8 AA4 8 PHE B 150 ILE B 153 1 O ILE B 153 N VAL B 128 SHEET 1 AA5 7 ALA B 20 VAL B 21 0 SHEET 2 AA5 7 ARG B 59 VAL B 67 1 O ARG B 59 N ALA B 20 SHEET 3 AA5 7 PHE B 88 SER B 96 -1 O PHE B 89 N CYS B 66 SHEET 4 AA5 7 LEU B 216 GLY B 229 -1 O MET B 228 N LEU B 92 SHEET 5 AA5 7 TYR B 197 ARG B 210 -1 N VAL B 204 O ASP B 225 SHEET 6 AA5 7 GLY B 166 ASP B 177 -1 N CYS B 168 O TYR B 208 SHEET 7 AA5 7 PHE B 159 ALA B 161 -1 N TRP B 160 O GLY B 169 SHEET 1 AA6 2 VAL B 378 ILE B 379 0 SHEET 2 AA6 2 SER B 408 VAL B 409 1 O SER B 408 N ILE B 379 CRYST1 78.230 55.590 125.720 90.00 102.07 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012783 0.000000 0.002734 0.00000 SCALE2 0.000000 0.017989 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008134 0.00000 CONECT 6697 6698 6699 6700 6704 CONECT 6698 6697 CONECT 6699 6697 CONECT 6700 6697 CONECT 6701 6702 6703 6704 6708 CONECT 6702 6701 CONECT 6703 6701 CONECT 6704 6697 6701 CONECT 6705 6706 6707 6708 6709 CONECT 6706 6705 CONECT 6707 6705 CONECT 6708 6701 6705 CONECT 6709 6705 6710 CONECT 6710 6709 6711 CONECT 6711 6710 6712 6713 CONECT 6712 6711 6717 CONECT 6713 6711 6714 6715 CONECT 6714 6713 CONECT 6715 6713 6716 6717 CONECT 6716 6715 CONECT 6717 6712 6715 6718 CONECT 6718 6717 6719 6727 CONECT 6719 6718 6720 CONECT 6720 6719 6721 CONECT 6721 6720 6722 6727 CONECT 6722 6721 6723 6724 CONECT 6723 6722 CONECT 6724 6722 6725 CONECT 6725 6724 6726 CONECT 6726 6725 6727 CONECT 6727 6718 6721 6726 CONECT 6734 6735 6736 CONECT 6735 6734 CONECT 6736 6734 6737 CONECT 6737 6736 CONECT 6738 6739 6740 CONECT 6739 6738 CONECT 6740 6738 6741 CONECT 6741 6740 CONECT 6742 6743 6744 CONECT 6743 6742 CONECT 6744 6742 6745 CONECT 6745 6744 CONECT 6746 6747 6748 CONECT 6747 6746 CONECT 6748 6746 6749 CONECT 6749 6748 CONECT 6750 6751 6752 CONECT 6751 6750 CONECT 6752 6750 CONECT 6753 6754 6755 CONECT 6754 6753 CONECT 6755 6753 6756 CONECT 6756 6755 CONECT 6757 6758 6759 6760 CONECT 6758 6757 CONECT 6759 6757 CONECT 6760 6757 6761 6762 CONECT 6761 6760 CONECT 6762 6760 6763 CONECT 6763 6762 6764 6765 CONECT 6764 6763 CONECT 6765 6763 CONECT 6766 6767 6768 CONECT 6767 6766 CONECT 6768 6766 6769 CONECT 6769 6768 CONECT 6770 6771 6772 CONECT 6771 6770 CONECT 6772 6770 6773 CONECT 6773 6772 CONECT 6774 6775 6776 6777 6781 CONECT 6775 6774 CONECT 6776 6774 CONECT 6777 6774 CONECT 6778 6779 6780 6781 6785 CONECT 6779 6778 CONECT 6780 6778 CONECT 6781 6774 6778 CONECT 6782 6783 6784 6785 6786 CONECT 6783 6782 CONECT 6784 6782 CONECT 6785 6778 6782 CONECT 6786 6782 6787 CONECT 6787 6786 6788 CONECT 6788 6787 6789 6790 CONECT 6789 6788 6794 CONECT 6790 6788 6791 6792 CONECT 6791 6790 CONECT 6792 6790 6793 6794 CONECT 6793 6792 CONECT 6794 6789 6792 6795 CONECT 6795 6794 6796 6804 CONECT 6796 6795 6797 CONECT 6797 6796 6798 CONECT 6798 6797 6799 6804 CONECT 6799 6798 6800 6801 CONECT 6800 6799 CONECT 6801 6799 6802 CONECT 6802 6801 6803 CONECT 6803 6802 6804 CONECT 6804 6795 6798 6803 CONECT 6811 6812 6813 CONECT 6812 6811 CONECT 6813 6811 CONECT 6814 6815 6816 CONECT 6815 6814 CONECT 6816 6814 CONECT 6817 6818 6819 6820 CONECT 6818 6817 CONECT 6819 6817 CONECT 6820 6817 6821 CONECT 6821 6820 6822 6823 6827 CONECT 6822 6821 CONECT 6823 6821 6824 CONECT 6824 6823 6825 6826 CONECT 6825 6824 CONECT 6826 6824 CONECT 6827 6821 6828 6829 CONECT 6828 6827 CONECT 6829 6827 CONECT 6830 6831 6832 CONECT 6831 6830 CONECT 6832 6830 6833 CONECT 6833 6832 CONECT 6834 6835 6836 CONECT 6835 6834 CONECT 6836 6834 6837 CONECT 6837 6836 CONECT 6838 6839 6840 CONECT 6839 6838 CONECT 6840 6838 6841 CONECT 6841 6840 CONECT 6842 6843 6844 CONECT 6843 6842 CONECT 6844 6842 6845 CONECT 6845 6844 CONECT 6846 6847 6848 CONECT 6847 6846 CONECT 6848 6846 6849 CONECT 6849 6848 CONECT 6850 6851 6852 CONECT 6851 6850 CONECT 6852 6850 6853 CONECT 6853 6852 CONECT 6854 6855 6856 CONECT 6855 6854 CONECT 6856 6854 6857 CONECT 6857 6856 CONECT 6858 6859 6860 CONECT 6859 6858 CONECT 6860 6858 6861 CONECT 6861 6860 MASTER 274 0 24 40 34 0 0 6 7055 2 153 68 END