HEADER PEPTIDE BINDING PROTEIN 23-SEP-24 9JNI TITLE KCMF1 ZN-COORDINATING DOMAINS WITH RCKG PEPTIDE (SULFONIC CYSTEINE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE KCMF1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FGF-INDUCED IN GASTRIC CANCER,POTASSIUM CHANNEL MODULATORY COMPND 5 FACTOR,PCMF,ZZ-TYPE ZINC FINGER-CONTAINING PROTEIN 1; COMPND 6 EC: 2.3.2.27; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ARG-OCS-LYS-GLY; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KCMF1, FIGC, ZZZ1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS COMPLEX, ZZ-DOMAIN, C2H2 ZN-FINGER DOMAIN, KCMF1, ARG/N-DEGON KEYWDS 2 PATHWAY, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.S.YANG,J.S.SHIN,H.K.SONG REVDAT 2 10-SEP-25 9JNI 1 JRNL REVDAT 1 27-AUG-25 9JNI 0 JRNL AUTH D.B.GRABARCZYK,J.F.EHRMANN,P.MURPHY,W.S.YANG,R.KURZBAUER, JRNL AUTH 2 L.E.BELL,L.DESZCZ,J.NEUHOLD,A.SCHLEIFFER,A.SHULKINA,J.LEE, JRNL AUTH 3 J.S.SHIN,A.MEINHART,G.A.VERSTEEG,E.ZAVODSZKY,H.K.SONG, JRNL AUTH 4 R.S.HEGDE,T.CLAUSEN JRNL TITL ARCHITECTURE OF THE UBR4 COMPLEX, A GIANT E4 LIGASE CENTRAL JRNL TITL 2 TO EUKARYOTIC PROTEIN QUALITY CONTROL. JRNL REF SCIENCE V. 389 909 2025 JRNL REFN ESSN 1095-9203 JRNL PMID 40875847 JRNL DOI 10.1126/SCIENCE.ADV9309 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18RC7_3834 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12642 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2298 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.4300 - 4.8400 1.00 1293 149 0.1986 0.2353 REMARK 3 2 4.8300 - 3.8400 1.00 1291 147 0.1703 0.1746 REMARK 3 3 3.8300 - 3.3600 1.00 1295 142 0.1785 0.2353 REMARK 3 4 3.3500 - 3.0500 1.00 1288 141 0.2052 0.2699 REMARK 3 5 3.0500 - 2.8300 1.00 1284 146 0.1994 0.2095 REMARK 3 6 2.8300 - 2.6600 1.00 1290 144 0.2075 0.2126 REMARK 3 7 2.6600 - 2.5300 1.00 1279 148 0.1997 0.2727 REMARK 3 8 2.5300 - 2.4200 1.00 1295 139 0.2049 0.2574 REMARK 3 9 2.4200 - 2.3300 1.00 1281 143 0.2078 0.2277 REMARK 3 10 2.3300 - 2.2500 1.00 1300 142 0.2061 0.2161 REMARK 3 11 2.2500 - 2.1800 1.00 1302 145 0.2053 0.2329 REMARK 3 12 2.1800 - 2.1100 1.00 1274 145 0.2326 0.2865 REMARK 3 13 2.1100 - 2.0600 1.00 1277 142 0.2384 0.2321 REMARK 3 14 2.0600 - 2.0100 1.00 1302 150 0.2401 0.2624 REMARK 3 15 2.0100 - 1.9600 1.00 1270 137 0.2614 0.3120 REMARK 3 16 1.9600 - 1.9200 0.96 1266 138 0.3006 0.3277 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.205 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.717 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 958 REMARK 3 ANGLE : 1.435 1296 REMARK 3 CHIRALITY : 0.067 139 REMARK 3 PLANARITY : 0.009 170 REMARK 3 DIHEDRAL : 25.584 342 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9JNI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1300051734. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.282590 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12643 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 29.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 75.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.0 1 M MAGNESIUM REMARK 280 CHLORIDE HEXAHYDRATE 20 % W/V PEG 6000 10 % V/V ETHYLENE GLYCOL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.79600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.79600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.79600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.79600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.79600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.79600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 48.79600 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 48.79600 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 48.79600 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 48.79600 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 48.79600 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 48.79600 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 48.79600 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 48.79600 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 48.79600 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 48.79600 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 48.79600 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 48.79600 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 24.39800 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 73.19400 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 73.19400 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 24.39800 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 24.39800 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 24.39800 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 73.19400 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 73.19400 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 24.39800 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 73.19400 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 24.39800 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 73.19400 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 24.39800 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 73.19400 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 73.19400 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 73.19400 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 24.39800 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 73.19400 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 24.39800 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 24.39800 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 24.39800 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 73.19400 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 73.19400 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 24.39800 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 24.39800 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 73.19400 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 73.19400 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 73.19400 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 73.19400 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 24.39800 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 73.19400 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 24.39800 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 73.19400 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 24.39800 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 24.39800 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 24.39800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 514 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 533 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 122 REMARK 465 ARG A 123 REMARK 465 ASP A 124 REMARK 465 LEU A 125 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 44 -124.25 53.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 9 SG REMARK 620 2 CYS A 12 SG 107.3 REMARK 620 3 CYS A 33 SG 113.5 116.2 REMARK 620 4 CYS A 36 SG 106.3 110.3 102.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 24 SG REMARK 620 2 CYS A 27 SG 120.3 REMARK 620 3 HIS A 46 ND1 109.6 115.3 REMARK 620 4 HIS A 50 ND1 105.6 102.4 100.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 63 SG REMARK 620 2 CYS A 66 SG 114.6 REMARK 620 3 HIS A 79 NE2 103.3 121.5 REMARK 620 4 HIS A 84 NE2 98.1 118.0 97.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 93 SG REMARK 620 2 CYS A 96 SG 116.2 REMARK 620 3 HIS A 114 NE2 106.8 115.4 REMARK 620 4 HIS A 119 NE2 108.6 106.6 102.2 REMARK 620 N 1 2 3 DBREF 9JNI A 2 55 UNP Q9P0J7 KCMF1_HUMAN 2 55 DBREF 9JNI A 60 125 UNP Q9P0J7 KCMF1_HUMAN 77 142 DBREF 9JNI B 1 4 PDB 9JNI 9JNI 1 4 SEQADV 9JNI GLY A 56 UNP Q9P0J7 LINKER SEQADV 9JNI GLY A 57 UNP Q9P0J7 LINKER SEQADV 9JNI GLY A 58 UNP Q9P0J7 LINKER SEQADV 9JNI GLY A 59 UNP Q9P0J7 LINKER SEQRES 1 A 124 SER ARG HIS GLU GLY VAL SER CYS ASP ALA CYS LEU LYS SEQRES 2 A 124 GLY ASN PHE ARG GLY ARG ARG TYR LYS CYS LEU ILE CYS SEQRES 3 A 124 TYR ASP TYR ASP LEU CYS ALA SER CYS TYR GLU SER GLY SEQRES 4 A 124 ALA THR THR THR ARG HIS THR THR ASP HIS PRO MET GLN SEQRES 5 A 124 CYS ILE GLY GLY GLY GLY SER PHE THR CYS PRO TYR CYS SEQRES 6 A 124 GLY LYS MET GLY TYR THR GLU THR SER LEU GLN GLU HIS SEQRES 7 A 124 VAL THR SER GLU HIS ALA GLU THR SER THR GLU VAL ILE SEQRES 8 A 124 CYS PRO ILE CYS ALA ALA LEU PRO GLY GLY ASP PRO ASN SEQRES 9 A 124 HIS VAL THR ASP ASP PHE ALA ALA HIS LEU THR LEU GLU SEQRES 10 A 124 HIS ARG ALA PRO ARG ASP LEU SEQRES 1 B 4 ARG OCS LYS GLY HET OCS B 2 11 HET ZN A 401 1 HET ZN A 402 1 HET ZN A 403 1 HET ZN A 404 1 HETNAM OCS CYSTEINESULFONIC ACID HETNAM ZN ZINC ION FORMUL 2 OCS C3 H7 N O5 S FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *33(H2 O) HELIX 1 AA1 ALA A 34 SER A 39 1 6 HELIX 2 AA2 THR A 72 HIS A 84 1 13 HELIX 3 AA3 CYS A 93 LEU A 99 1 7 HELIX 4 AA4 ASP A 110 HIS A 119 1 10 SHEET 1 AA1 3 ASP A 31 CYS A 33 0 SHEET 2 AA1 3 ARG A 21 CYS A 24 -1 N TYR A 22 O LEU A 32 SHEET 3 AA1 3 MET A 52 ILE A 55 -1 O ILE A 55 N ARG A 21 SHEET 1 AA2 2 VAL A 91 ILE A 92 0 SHEET 2 AA2 2 VAL A 107 THR A 108 -1 O THR A 108 N VAL A 91 LINK C ARG B 1 N OCS B 2 1555 1555 1.32 LINK C OCS B 2 N LYS B 3 1555 1555 1.32 LINK SG CYS A 9 ZN ZN A 401 1555 1555 2.37 LINK SG CYS A 12 ZN ZN A 401 1555 1555 2.27 LINK SG CYS A 24 ZN ZN A 402 1555 1555 2.24 LINK SG CYS A 27 ZN ZN A 402 1555 1555 2.38 LINK SG CYS A 33 ZN ZN A 401 1555 1555 2.37 LINK SG CYS A 36 ZN ZN A 401 1555 1555 2.32 LINK ND1 HIS A 46 ZN ZN A 402 1555 1555 2.08 LINK ND1 HIS A 50 ZN ZN A 402 1555 1555 2.08 LINK SG CYS A 63 ZN ZN A 403 1555 1555 2.42 LINK SG CYS A 66 ZN ZN A 403 1555 1555 2.29 LINK NE2 HIS A 79 ZN ZN A 403 1555 1555 1.94 LINK NE2 HIS A 84 ZN ZN A 403 1555 1555 2.04 LINK SG CYS A 93 ZN ZN A 404 1555 1555 2.31 LINK SG CYS A 96 ZN ZN A 404 1555 1555 2.32 LINK NE2 HIS A 114 ZN ZN A 404 1555 1555 2.04 LINK NE2 HIS A 119 ZN ZN A 404 1555 1555 2.02 CRYST1 97.592 97.592 97.592 90.00 90.00 90.00 P 43 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010247 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010247 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010247 0.00000 TER 1728 ALA A 121 HETATM 1755 N OCS B 2 -13.406 25.626 17.889 1.00 42.65 N HETATM 1756 CA OCS B 2 -12.335 26.484 17.433 1.00 43.77 C HETATM 1757 CB OCS B 2 -11.624 25.864 16.244 1.00 43.32 C HETATM 1758 SG OCS B 2 -10.138 26.700 15.684 1.00 53.04 S HETATM 1759 C OCS B 2 -13.002 27.763 17.032 1.00 58.00 C HETATM 1760 O OCS B 2 -13.872 27.733 16.168 1.00 68.40 O HETATM 1761 OD1 OCS B 2 -9.472 27.303 16.816 1.00 49.36 O HETATM 1762 OD2 OCS B 2 -10.439 27.659 14.685 1.00 66.08 O HETATM 1763 OD3 OCS B 2 -9.268 25.657 15.192 1.00 49.55 O HETATM 1764 HB2 OCS B 2 -12.242 25.849 15.497 1.00 52.06 H HETATM 1765 HB3 OCS B 2 -11.369 24.959 16.483 1.00 52.06 H TER 1795 GLY B 4 HETATM 1796 ZN ZN A 401 -11.333 18.787 28.562 1.00 42.71 ZN HETATM 1797 ZN ZN A 402 -17.005 13.041 17.381 1.00 42.49 ZN HETATM 1798 ZN ZN A 403 20.190 33.306 17.704 1.00 53.90 ZN HETATM 1799 ZN ZN A 404 5.351 32.265 21.088 1.00 46.87 ZN HETATM 1800 O HOH A 501 -14.437 18.511 14.604 1.00 32.35 O HETATM 1801 O HOH A 502 -21.513 17.801 14.422 1.00 47.09 O HETATM 1802 O HOH A 503 0.636 31.564 11.209 1.00 48.00 O HETATM 1803 O HOH A 504 -1.798 8.009 25.194 1.00 49.29 O HETATM 1804 O HOH A 505 5.529 46.888 17.519 1.00 48.99 O HETATM 1805 O HOH A 506 -10.712 16.000 31.977 1.00 46.82 O HETATM 1806 O HOH A 507 -12.464 22.567 15.738 1.00 32.79 O HETATM 1807 O HOH A 508 -4.610 32.835 16.133 1.00 60.71 O HETATM 1808 O HOH A 509 -4.458 24.086 17.616 1.00 40.40 O HETATM 1809 O HOH A 510 3.917 35.040 16.127 1.00 32.54 O HETATM 1810 O HOH A 511 -4.361 19.022 26.354 1.00 32.92 O HETATM 1811 O HOH A 512 1.334 29.318 24.107 1.00 53.94 O HETATM 1812 O HOH A 513 -21.080 16.271 18.831 1.00 44.91 O HETATM 1813 O HOH A 514 -7.662 12.199 32.060 0.50 51.28 O HETATM 1814 O HOH A 515 -12.851 10.733 22.053 1.00 43.14 O HETATM 1815 O HOH A 516 5.937 38.563 25.056 1.00 53.92 O HETATM 1816 O HOH A 517 -3.367 12.065 15.017 1.00 49.26 O HETATM 1817 O HOH A 518 -12.765 10.723 24.559 1.00 47.68 O HETATM 1818 O HOH A 519 -16.189 24.215 24.635 1.00 53.29 O HETATM 1819 O HOH A 520 18.902 20.932 15.767 1.00 61.76 O HETATM 1820 O HOH A 521 -8.611 8.220 16.057 1.00 51.55 O HETATM 1821 O HOH A 522 -10.206 27.786 30.475 1.00 42.06 O HETATM 1822 O HOH A 523 -2.228 28.247 18.946 1.00 52.66 O HETATM 1823 O HOH A 524 -4.248 23.989 30.069 1.00 44.70 O HETATM 1824 O HOH A 525 2.238 41.109 20.515 1.00 36.29 O HETATM 1825 O HOH A 526 15.279 37.729 24.967 1.00 55.16 O HETATM 1826 O HOH A 527 -5.431 18.116 29.225 1.00 42.89 O HETATM 1827 O HOH A 528 -18.850 6.759 23.384 1.00 49.27 O HETATM 1828 O HOH A 529 19.463 22.472 17.763 1.00 56.00 O HETATM 1829 O HOH A 530 -13.167 28.214 21.608 1.00 53.47 O HETATM 1830 O HOH A 531 -18.531 24.037 23.113 1.00 60.85 O HETATM 1831 O HOH A 532 13.805 26.402 10.881 1.00 50.86 O HETATM 1832 O HOH A 533 -1.498 36.597 22.900 0.50 63.11 O CONECT 107 1796 CONECT 139 1796 CONECT 353 1797 CONECT 401 1797 CONECT 496 1796 CONECT 527 1796 CONECT 668 1797 CONECT 725 1797 CONECT 888 1798 CONECT 933 1798 CONECT 1126 1798 CONECT 1199 1798 CONECT 1326 1799 CONECT 1369 1799 CONECT 1602 1799 CONECT 1686 1799 CONECT 1731 1755 CONECT 1755 1731 1756 CONECT 1756 1755 1757 1759 CONECT 1757 1756 1758 1764 1765 CONECT 1758 1757 1761 1762 1763 CONECT 1759 1756 1760 1766 CONECT 1760 1759 CONECT 1761 1758 CONECT 1762 1758 CONECT 1763 1758 CONECT 1764 1757 CONECT 1765 1757 CONECT 1766 1759 CONECT 1796 107 139 496 527 CONECT 1797 353 401 668 725 CONECT 1798 888 933 1126 1199 CONECT 1799 1326 1369 1602 1686 MASTER 361 0 5 4 5 0 0 6 975 2 33 11 END