HEADER HYDROLASE 24-SEP-24 9JOC TITLE CRYSTAL STRUCTURE OF ENDO-1,3-FUCANASE (FUN168D) FROM GH168 FAMILY COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDO-1.3-FUCANASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: WENYINGZHUANGIA FUCANILYTICA; SOURCE 3 ORGANISM_TAXID: 1790137; SOURCE 4 GENE: AXE80_08865; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ENDO-1.3-FUCANASE, GH168, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.N.CHEN,Y.G.CHANG REVDAT 1 27-NOV-24 9JOC 0 JRNL AUTH G.N.CHEN,Y.G.CHANG JRNL TITL STRUCTURE OF ENDO-1.3-FUCANASE (FUN168D) FROM GH168 FAMILY JRNL TITL 2 AT 1.29 ANGSTROMS RESULUTION. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1-4487-000 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 93037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.157 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.150 REMARK 3 FREE R VALUE TEST SET COUNT : 3901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 3.9200 1.00 6504 144 0.1369 0.1496 REMARK 3 2 3.9200 - 3.1100 1.00 6490 146 0.1236 0.1385 REMARK 3 3 3.1100 - 2.7200 1.00 6494 142 0.1366 0.1659 REMARK 3 4 2.7200 - 2.4700 1.00 6514 150 0.1323 0.1739 REMARK 3 5 2.4700 - 2.2900 1.00 6547 138 0.1282 0.1468 REMARK 3 6 2.2900 - 2.1600 1.00 6500 142 0.1260 0.1484 REMARK 3 7 2.1600 - 2.0500 1.00 6533 134 0.1237 0.1237 REMARK 3 8 2.0500 - 1.9600 1.00 6515 142 0.1217 0.1548 REMARK 3 9 1.9600 - 1.8900 1.00 6502 150 0.1307 0.1450 REMARK 3 10 1.8900 - 1.8200 1.00 6499 143 0.1378 0.1751 REMARK 3 11 1.8200 - 1.7600 1.00 6487 144 0.1310 0.1310 REMARK 3 12 1.7600 - 1.7100 1.00 6565 143 0.1344 0.1408 REMARK 3 13 1.7100 - 1.6700 1.00 6457 144 0.1380 0.1776 REMARK 3 14 1.6700 - 1.6300 1.00 6502 141 0.1401 0.1529 REMARK 3 15 1.6300 - 1.5900 1.00 6489 142 0.1316 0.1449 REMARK 3 16 1.5900 - 1.5600 1.00 6532 148 0.1366 0.1799 REMARK 3 17 1.5600 - 1.5300 1.00 6520 142 0.1375 0.1803 REMARK 3 18 1.5300 - 1.5000 1.00 6459 146 0.1395 0.1530 REMARK 3 19 1.5000 - 1.4700 1.00 6562 148 0.1455 0.1980 REMARK 3 20 1.4700 - 1.4400 0.99 6445 148 0.1540 0.1581 REMARK 3 21 1.4400 - 1.4200 0.99 6474 136 0.1615 0.1631 REMARK 3 22 1.4200 - 1.4000 0.98 6396 140 0.1681 0.1775 REMARK 3 23 1.4000 - 1.3800 0.97 6298 143 0.1896 0.1956 REMARK 3 24 1.3800 - 1.3600 0.94 6127 137 0.1935 0.2212 REMARK 3 25 1.3600 - 1.3400 0.91 5972 130 0.2009 0.2171 REMARK 3 26 1.3400 - 1.3200 0.88 5723 112 0.2180 0.2306 REMARK 3 27 1.3200 - 1.3100 0.85 5573 107 0.2338 0.2462 REMARK 3 28 1.3100 - 1.2900 0.80 5164 119 0.2451 0.2597 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3028 REMARK 3 ANGLE : 1.098 4110 REMARK 3 CHIRALITY : 0.088 448 REMARK 3 PLANARITY : 0.010 531 REMARK 3 DIHEDRAL : 5.911 402 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4244 2.6400 -10.2898 REMARK 3 T TENSOR REMARK 3 T11: 0.1238 T22: 0.1440 REMARK 3 T33: 0.1118 T12: 0.0245 REMARK 3 T13: -0.0234 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.4020 L22: 1.4871 REMARK 3 L33: 1.7790 L12: -0.8372 REMARK 3 L13: -0.5686 L23: 0.8609 REMARK 3 S TENSOR REMARK 3 S11: 0.0769 S12: 0.2025 S13: 0.0181 REMARK 3 S21: -0.1303 S22: -0.1007 S23: 0.0289 REMARK 3 S31: -0.1651 S32: -0.1273 S33: 0.0250 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.6050 -5.5673 -10.0712 REMARK 3 T TENSOR REMARK 3 T11: 0.1026 T22: 0.0891 REMARK 3 T33: 0.0971 T12: -0.0049 REMARK 3 T13: 0.0017 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 1.5004 L22: 0.8124 REMARK 3 L33: 0.8793 L12: -0.5849 REMARK 3 L13: -0.1864 L23: 0.1394 REMARK 3 S TENSOR REMARK 3 S11: -0.0111 S12: 0.0573 S13: -0.0478 REMARK 3 S21: -0.0277 S22: -0.0113 S23: -0.0001 REMARK 3 S31: -0.0036 S32: -0.0295 S33: 0.0091 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.6429 2.7619 -5.5520 REMARK 3 T TENSOR REMARK 3 T11: 0.1319 T22: 0.1276 REMARK 3 T33: 0.1548 T12: -0.0084 REMARK 3 T13: -0.0044 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 2.5289 L22: 2.1561 REMARK 3 L33: 1.9191 L12: -1.4527 REMARK 3 L13: 0.4478 L23: -0.6969 REMARK 3 S TENSOR REMARK 3 S11: 0.0056 S12: 0.0943 S13: 0.2352 REMARK 3 S21: 0.0191 S22: -0.0202 S23: -0.1707 REMARK 3 S31: -0.1313 S32: 0.1468 S33: 0.0062 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 210 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.6275 3.7533 5.2968 REMARK 3 T TENSOR REMARK 3 T11: 0.1315 T22: 0.1298 REMARK 3 T33: 0.1409 T12: 0.0166 REMARK 3 T13: -0.0092 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 0.7474 L22: 1.0149 REMARK 3 L33: 2.0340 L12: 0.2201 REMARK 3 L13: -0.5659 L23: -0.5934 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: -0.0786 S13: 0.0307 REMARK 3 S21: 0.0132 S22: -0.0126 S23: -0.1025 REMARK 3 S31: 0.0009 S32: 0.1421 S33: 0.0082 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 254 THROUGH 290 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8596 2.3164 10.8598 REMARK 3 T TENSOR REMARK 3 T11: 0.1223 T22: 0.1255 REMARK 3 T33: 0.1293 T12: 0.0164 REMARK 3 T13: -0.0070 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 1.0613 L22: 0.8443 REMARK 3 L33: 1.7920 L12: -0.0549 REMARK 3 L13: -0.1636 L23: -0.0867 REMARK 3 S TENSOR REMARK 3 S11: 0.0263 S12: -0.0651 S13: -0.0524 REMARK 3 S21: 0.0734 S22: -0.0320 S23: -0.0503 REMARK 3 S31: 0.0498 S32: 0.1124 S33: 0.0120 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 291 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.2529 -3.2723 10.3666 REMARK 3 T TENSOR REMARK 3 T11: 0.1199 T22: 0.1220 REMARK 3 T33: 0.1274 T12: -0.0055 REMARK 3 T13: -0.0046 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.8447 L22: 1.9238 REMARK 3 L33: 1.5291 L12: 0.1782 REMARK 3 L13: -0.1688 L23: 0.5684 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: -0.0199 S13: -0.1857 REMARK 3 S21: 0.0724 S22: -0.0548 S23: 0.2056 REMARK 3 S31: 0.1585 S32: -0.1286 S33: 0.0753 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 320 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9409 4.3460 2.9214 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.1377 REMARK 3 T33: 0.1200 T12: 0.0214 REMARK 3 T13: -0.0141 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.7562 L22: 1.7313 REMARK 3 L33: 1.1545 L12: -0.2161 REMARK 3 L13: -0.0456 L23: 0.8583 REMARK 3 S TENSOR REMARK 3 S11: 0.0209 S12: 0.0427 S13: 0.0046 REMARK 3 S21: -0.0082 S22: -0.1217 S23: 0.2022 REMARK 3 S31: -0.0399 S32: -0.1965 S33: 0.0999 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 359 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8459 9.2033 18.8840 REMARK 3 T TENSOR REMARK 3 T11: 0.1077 T22: 0.1150 REMARK 3 T33: 0.1160 T12: 0.0161 REMARK 3 T13: 0.0085 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 1.8499 L22: 1.8094 REMARK 3 L33: 3.0712 L12: -0.0009 REMARK 3 L13: 0.9821 L23: -0.7574 REMARK 3 S TENSOR REMARK 3 S11: -0.0104 S12: -0.0673 S13: 0.0484 REMARK 3 S21: 0.0665 S22: 0.0364 S23: 0.1663 REMARK 3 S31: -0.1530 S32: -0.2100 S33: -0.0145 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9JOC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 27-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1300051808. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93037 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.290 REMARK 200 RESOLUTION RANGE LOW (A) : 73.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.36 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.37400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM CHLORIDE, 20% W/V REMARK 280 POLYETHYLENE GLYCOL 3,350, PH 6.3, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.55700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.55700 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 46.55700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 917 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 THR A 2 REMARK 465 LYS A 3 REMARK 465 ASN A 4 REMARK 465 GLY A 5 REMARK 465 ILE A 6 REMARK 465 ILE A 7 REMARK 465 GLU A 8 REMARK 465 LEU A 9 REMARK 465 GLU A 10 REMARK 465 GLN A 11 REMARK 465 GLU A 12 REMARK 465 THR A 13 REMARK 465 GLU A 14 REMARK 465 GLU A 15 REMARK 465 GLU A 16 REMARK 465 LEU A 17 REMARK 465 GLU A 18 REMARK 465 GLN A 19 REMARK 465 ASN A 20 REMARK 465 GLN A 21 REMARK 465 GLU A 22 REMARK 465 GLU A 389 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 368 O HOH A 401 1.25 REMARK 500 NZ LYS A 368 O HOH A 401 1.66 REMARK 500 O HOH A 417 O HOH A 478 1.80 REMARK 500 O HOH A 667 O HOH A 811 1.94 REMARK 500 O HOH A 653 O HOH A 746 1.96 REMARK 500 O HOH A 689 O HOH A 771 2.00 REMARK 500 O HOH A 682 O HOH A 787 2.01 REMARK 500 O HOH A 465 O HOH A 824 2.06 REMARK 500 O HOH A 783 O HOH A 829 2.12 REMARK 500 O HOH A 658 O HOH A 702 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HE21 GLN A 127 HD22 ASN A 336 3655 1.33 REMARK 500 O HOH A 412 O HOH A 570 2545 2.07 REMARK 500 O HOH A 840 O HOH A 910 2545 2.08 REMARK 500 O HOH A 807 O HOH A 845 4655 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 327 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 287 115.18 -161.71 REMARK 500 ASP A 292 178.67 69.86 REMARK 500 ASP A 293 55.60 -161.11 REMARK 500 ASP A 330 57.39 -115.07 REMARK 500 LEU A 351 -66.10 -107.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 913 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 914 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH A 915 DISTANCE = 6.79 ANGSTROMS REMARK 525 HOH A 916 DISTANCE = 8.55 ANGSTROMS REMARK 525 HOH A 917 DISTANCE = 9.95 ANGSTROMS DBREF1 9JOC A 1 389 UNP A0A1B1Y6G8_9FLAO DBREF2 9JOC A A0A1B1Y6G8 22 410 SEQRES 1 A 389 SER THR LYS ASN GLY ILE ILE GLU LEU GLU GLN GLU THR SEQRES 2 A 389 GLU GLU GLU LEU GLU GLN ASN GLN GLU ILE ASP TYR SER SEQRES 3 A 389 ASN TYR PRO GLU PHE SER TRP ASP THR MET PRO LEU TYR SEQRES 4 A 389 MET HIS VAL ARG LYS ASN THR ALA TYR THR ASP GLU GLU SEQRES 5 A 389 ILE ASN TYR LEU ALA SER PHE PRO LEU ILE THR LEU GLU SEQRES 6 A 389 LYS SER GLN ALA GLN ASN THR TYR GLY SER THR GLU GLU SEQRES 7 A 389 GLY THR LEU ALA THR ALA SER ALA ILE LYS LEU LYS ASN SEQRES 8 A 389 ASN LYS ALA LYS VAL LEU TYR TYR ARG ASN VAL VAL ILE SEQRES 9 A 389 ASN TRP GLY ASN TYR LYS ASN ASP ASP GLU PHE ILE SER SEQRES 10 A 389 LYS ASN PRO SER ALA LEU LEU LYS ASN GLN ASN ASN GLU SEQRES 11 A 389 LEU VAL TYR MET PRO ASN GLY SER THR PRO PHE PHE ASP SEQRES 12 A 389 ILE THR LYS SER PHE VAL GLN GLU TYR TRP LEU LYS SER SEQRES 13 A 389 VAL GLU ASP MET VAL ALA THR PRO ASN ILE ASP GLY THR SEQRES 14 A 389 PHE ILE ASP ALA ASN ILE LYS VAL LEU VAL PRO SER PHE SEQRES 15 A 389 PHE SER SER LYS VAL GLY VAL ASN LYS GLN ALA GLU ILE SEQRES 16 A 389 GLU ASN SER TYR PHE SER MET MET SER ARG LEU LYS GLU SEQRES 17 A 389 SER LEU SER ASN ASN LEU ILE LEU ALA ASN ILE ILE ARG SEQRES 18 A 389 VAL ARG PRO GLU PHE GLU GLU ASN GLY LEU GLU TYR LEU SEQRES 19 A 389 GLY TYR PHE ASN GLY SER TYR LEU GLU GLY PHE ASP SER SEQRES 20 A 389 GLU ALA PHE GLY MET SER ASN ALA GLU TYR LEU VAL GLU SEQRES 21 A 389 GLY ILE GLU ALA THR GLN LYS ALA ALA GLN SER GLY LYS SEQRES 22 A 389 ILE ILE THR MET THR LEU GLY LEU GLY GLU ALA ILE ASP SEQRES 23 A 389 ASN ASN THR GLY ILE ASP ASP GLN ARG GLU ASP VAL ASP SEQRES 24 A 389 LEU ASN ASP GLU GLU LEU ASN LYS ARG VAL ASP TYR LEU SEQRES 25 A 389 LEU ALA ILE PHE LEU ILE CYS ALA GLU LYS TYR SER TYR SEQRES 26 A 389 VAL TYR LEU HIS ASP GLY TYR LEU ALA THR ASN SER ALA SEQRES 27 A 389 VAL TRP LEU HIS GLN PHE ASP GLN TYR LYS LYS ALA LEU SEQRES 28 A 389 GLY ALA PRO LEU GLY LYS ALA ILE LYS ASN GLY TYR ILE SEQRES 29 A 389 TYR THR ARG LYS PHE GLU ASN LEU ASP VAL TRP LEU ASN SEQRES 30 A 389 LEU GLU THR GLN THR ALA THR LEU THR TRP LYS GLU FORMUL 2 HOH *517(H2 O) HELIX 1 AA1 THR A 49 SER A 58 1 10 HELIX 2 AA2 ALA A 69 GLY A 74 1 6 HELIX 3 AA3 SER A 75 ASN A 91 1 17 HELIX 4 AA4 TYR A 109 ASN A 119 1 11 HELIX 5 AA5 PRO A 120 LEU A 123 5 4 HELIX 6 AA6 LYS A 146 ALA A 162 1 17 HELIX 7 AA7 ALA A 173 VAL A 179 1 7 HELIX 8 AA8 VAL A 179 GLY A 188 1 10 HELIX 9 AA9 GLY A 188 LEU A 210 1 23 HELIX 10 AB1 GLY A 230 PHE A 237 5 8 HELIX 11 AB2 SER A 253 SER A 271 1 19 HELIX 12 AB3 ASN A 301 ALA A 320 1 20 HELIX 13 AB4 LEU A 333 SER A 337 5 5 HELIX 14 AB5 PHE A 344 LYS A 348 5 5 SHEET 1 AA1 8 TYR A 39 VAL A 42 0 SHEET 2 AA1 8 LEU A 61 LEU A 64 1 O THR A 63 N VAL A 42 SHEET 3 AA1 8 LYS A 95 ASN A 101 1 O LEU A 97 N ILE A 62 SHEET 4 AA1 8 GLY A 168 ASP A 172 1 O PHE A 170 N ARG A 100 SHEET 5 AA1 8 LEU A 214 ASN A 218 1 O LEU A 216 N ILE A 171 SHEET 6 AA1 8 GLY A 239 LEU A 242 1 O TYR A 241 N ALA A 217 SHEET 7 AA1 8 ILE A 274 GLY A 280 1 O ILE A 274 N SER A 240 SHEET 8 AA1 8 SER A 324 HIS A 329 1 O TYR A 325 N ILE A 275 SHEET 1 AA2 4 ILE A 359 ASN A 361 0 SHEET 2 AA2 4 ILE A 364 PHE A 369 -1 O ILE A 364 N ASN A 361 SHEET 3 AA2 4 LEU A 372 ASN A 377 -1 O LEU A 372 N PHE A 369 SHEET 4 AA2 4 THR A 382 TRP A 387 -1 O THR A 382 N ASN A 377 CRYST1 84.449 84.449 93.114 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011841 0.006837 0.000000 0.00000 SCALE2 0.000000 0.013673 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010740 0.00000