HEADER HYDROLASE 24-SEP-24 9JOH TITLE COMPLEX STRUCTURE OF ENDO-1,3-FUCANASE (FUN168D) WITH FUCOTETRAOSE TITLE 2 FROM ISOSTICHOPUS BADIONOTUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDO-1.3-FUCANASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: WENYINGZHUANGIA FUCANILYTICA; SOURCE 3 ORGANISM_TAXID: 1790137; SOURCE 4 GENE: AXE80_08865; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ENDO-1.3-FUCANASE, GH168, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.N.CHEN,Y.G.CHANG REVDAT 1 27-NOV-24 9JOH 0 JRNL AUTH G.N.CHEN,Y.G.CHANG JRNL TITL COMPLEX STRUCTURE OF ENDO-1.3-FUCANASE (FUN168D) WITH JRNL TITL 2 FUCOTETRAOSE FROM ISOSTICHOPUS BADIONOTUS AT 1.36 ANGSTROMS JRNL TITL 3 RESULUTION. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 182917 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.2200 - 3.2700 0.99 13020 144 0.1361 0.1473 REMARK 3 2 3.2700 - 2.6000 0.99 12896 141 0.1393 0.1563 REMARK 3 3 2.6000 - 2.2700 1.00 12949 143 0.1329 0.1415 REMARK 3 4 2.2700 - 2.0600 1.00 12952 141 0.1325 0.1570 REMARK 3 5 2.0600 - 1.9200 0.99 12888 143 0.1391 0.1739 REMARK 3 6 1.9200 - 1.8000 1.00 12892 141 0.1494 0.1774 REMARK 3 7 1.8000 - 1.7100 1.00 12916 137 0.1503 0.1615 REMARK 3 8 1.7100 - 1.6400 1.00 12957 146 0.1537 0.1840 REMARK 3 9 1.6400 - 1.5700 1.00 12914 141 0.1589 0.1562 REMARK 3 10 1.5700 - 1.5200 1.00 12913 138 0.1661 0.1999 REMARK 3 11 1.5200 - 1.4700 1.00 12897 149 0.1823 0.1821 REMARK 3 12 1.4700 - 1.4300 1.00 12895 140 0.1911 0.2135 REMARK 3 13 1.4300 - 1.3900 1.00 12942 140 0.2020 0.2231 REMARK 3 14 1.3900 - 1.3600 1.00 12904 138 0.2186 0.2470 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 6162 REMARK 3 ANGLE : 1.361 8392 REMARK 3 CHIRALITY : 0.095 938 REMARK 3 PLANARITY : 0.009 1057 REMARK 3 DIHEDRAL : 7.276 812 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9JOH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 28-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1300051849. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 182984 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.360 REMARK 200 RESOLUTION RANGE LOW (A) : 69.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.03200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.29300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG1500 +20% GLYCEROL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 69.28850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 SER A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 SER A -23 REMARK 465 SER A -22 REMARK 465 GLY A -21 REMARK 465 LEU A -20 REMARK 465 VAL A -19 REMARK 465 PRO A -18 REMARK 465 ARG A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 MET A -13 REMARK 465 ALA A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 GLN A -6 REMARK 465 GLN A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 SER A 1 REMARK 465 THR A 2 REMARK 465 LYS A 3 REMARK 465 ASN A 4 REMARK 465 GLY A 5 REMARK 465 ILE A 6 REMARK 465 ILE A 7 REMARK 465 GLU A 8 REMARK 465 LEU A 9 REMARK 465 GLU A 10 REMARK 465 GLN A 11 REMARK 465 GLU A 12 REMARK 465 THR A 13 REMARK 465 GLU A 14 REMARK 465 GLU A 15 REMARK 465 GLU A 16 REMARK 465 GLU A 389 REMARK 465 MET B -33 REMARK 465 GLY B -32 REMARK 465 SER B -31 REMARK 465 SER B -30 REMARK 465 HIS B -29 REMARK 465 HIS B -28 REMARK 465 HIS B -27 REMARK 465 HIS B -26 REMARK 465 HIS B -25 REMARK 465 HIS B -24 REMARK 465 SER B -23 REMARK 465 SER B -22 REMARK 465 GLY B -21 REMARK 465 LEU B -20 REMARK 465 VAL B -19 REMARK 465 PRO B -18 REMARK 465 ARG B -17 REMARK 465 GLY B -16 REMARK 465 SER B -15 REMARK 465 HIS B -14 REMARK 465 MET B -13 REMARK 465 ALA B -12 REMARK 465 SER B -11 REMARK 465 MET B -10 REMARK 465 THR B -9 REMARK 465 GLY B -8 REMARK 465 GLY B -7 REMARK 465 GLN B -6 REMARK 465 GLN B -5 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 SER B 1 REMARK 465 THR B 2 REMARK 465 LYS B 3 REMARK 465 ASN B 4 REMARK 465 GLY B 5 REMARK 465 ILE B 6 REMARK 465 ILE B 7 REMARK 465 GLU B 8 REMARK 465 LEU B 9 REMARK 465 GLU B 10 REMARK 465 GLN B 11 REMARK 465 GLU B 12 REMARK 465 THR B 13 REMARK 465 GLU B 14 REMARK 465 GLU B 15 REMARK 465 GLU B 16 REMARK 465 LEU B 17 REMARK 465 GLU B 18 REMARK 465 GLN B 19 REMARK 465 ASN B 20 REMARK 465 GLN B 21 REMARK 465 GLU B 22 REMARK 465 GLU B 389 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 19 NE2 REMARK 470 GLN A 21 CD OE1 NE2 REMARK 470 GLU A 22 CD OE1 OE2 REMARK 470 LYS A 90 CD CE NZ REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 GLU A 227 CG CD OE1 OE2 REMARK 470 LYS A 267 CD CE NZ REMARK 470 ASN A 287 CG OD1 ND2 REMARK 470 GLU A 296 CG CD OE1 OE2 REMARK 470 VAL A 298 CG1 CG2 REMARK 470 GLN A 343 NE2 REMARK 470 LYS A 388 CE NZ REMARK 470 ASP B 286 CG OD1 OD2 REMARK 470 ASN B 288 CG OD1 ND2 REMARK 470 VAL B 298 CG1 CG2 REMARK 470 LYS B 307 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HO4 X6Y D 4 O HOH A 868 1.56 REMARK 500 HZ3 LYS A 125 O HOH A 405 1.58 REMARK 500 O9 X2Y D 2 HO2 FUC D 3 1.59 REMARK 500 O HOH A 928 O HOH B 871 1.82 REMARK 500 O HOH B 1120 O HOH B 1125 1.84 REMARK 500 O HOH B 782 O HOH B 853 1.86 REMARK 500 O HOH B 404 O HOH B 587 1.86 REMARK 500 O HOH A 1086 O HOH B 1089 1.87 REMARK 500 O HOH B 576 O HOH B 823 1.88 REMARK 500 O HOH A 755 O HOH A 807 1.91 REMARK 500 O4 X6Y D 4 O HOH A 868 1.92 REMARK 500 O HOH A 740 O HOH B 693 1.93 REMARK 500 O HOH B 666 O HOH B 782 1.95 REMARK 500 O HOH B 402 O HOH B 462 1.96 REMARK 500 O HOH B 1114 O HOH B 1116 1.96 REMARK 500 O HOH B 707 O HOH B 857 1.97 REMARK 500 O HOH A 928 O HOH B 741 1.97 REMARK 500 O HOH A 803 O HOH A 951 1.98 REMARK 500 O HOH A 412 O HOH A 856 1.99 REMARK 500 O HOH A 516 O HOH B 807 1.99 REMARK 500 O GLU B 283 O HOH B 401 1.99 REMARK 500 O HOH A 647 O HOH A 917 2.00 REMARK 500 O HOH A 420 O HOH A 837 2.01 REMARK 500 O HOH A 408 O HOH A 836 2.02 REMARK 500 O HOH B 620 O HOH B 752 2.02 REMARK 500 O HOH A 820 O HOH B 439 2.02 REMARK 500 O HOH A 861 O HOH A 866 2.04 REMARK 500 O HOH A 787 O HOH A 803 2.05 REMARK 500 O HOH B 748 O HOH B 880 2.06 REMARK 500 O HOH A 824 O HOH A 1081 2.07 REMARK 500 O HOH B 818 O HOH B 820 2.07 REMARK 500 O HOH B 798 O HOH B 855 2.07 REMARK 500 O HOH B 979 O HOH B 1114 2.08 REMARK 500 O HOH A 907 O HOH A 1056 2.08 REMARK 500 O HOH B 764 O HOH B 837 2.09 REMARK 500 O HOH A 842 O HOH B 1070 2.09 REMARK 500 O HOH B 743 O HOH B 1049 2.09 REMARK 500 O HOH A 788 O HOH A 971 2.09 REMARK 500 O HOH A 462 O HOH A 786 2.10 REMARK 500 O HOH A 409 O HOH A 631 2.11 REMARK 500 O HOH B 521 O HOH B 806 2.11 REMARK 500 O HOH A 871 O HOH A 925 2.11 REMARK 500 O HOH A 823 O HOH A 1018 2.12 REMARK 500 OH TYR A 363 O HOH A 401 2.12 REMARK 500 O HOH A 927 O HOH A 934 2.12 REMARK 500 O HOH B 545 O HOH B 984 2.12 REMARK 500 O HOH A 508 O HOH A 516 2.12 REMARK 500 O HOH B 955 O HOH B 1063 2.13 REMARK 500 O HOH A 817 O HOH A 1004 2.13 REMARK 500 OD2 ASP A 345 O HOH A 402 2.13 REMARK 500 REMARK 500 THIS ENTRY HAS 61 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 917 O HOH B 923 2546 1.98 REMARK 500 O HOH A 798 O HOH B 963 1554 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 108 11.24 81.46 REMARK 500 ALA A 173 15.34 81.38 REMARK 500 ILE A 219 -39.77 -134.16 REMARK 500 LEU A 351 -63.53 -105.96 REMARK 500 SER B 138 -31.17 -133.89 REMARK 500 ILE B 219 -42.12 -134.72 REMARK 500 ARG B 221 131.94 -170.67 REMARK 500 LEU B 351 -66.61 -105.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1113 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A1115 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A1116 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A1117 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A1118 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A1119 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH A1122 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH B1121 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B1122 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B1124 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH B1125 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH B1126 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH B1127 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH B1129 DISTANCE = 6.89 ANGSTROMS REMARK 525 HOH B1131 DISTANCE = 6.11 ANGSTROMS DBREF1 9JOH A 1 389 UNP A0A1B1Y6G8_9FLAO DBREF2 9JOH A A0A1B1Y6G8 22 410 DBREF1 9JOH B 1 389 UNP A0A1B1Y6G8_9FLAO DBREF2 9JOH B A0A1B1Y6G8 22 410 SEQADV 9JOH MET A -33 UNP A0A1B1Y6G INITIATING METHIONINE SEQADV 9JOH GLY A -32 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER A -31 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER A -30 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS A -29 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS A -28 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS A -27 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS A -26 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS A -25 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS A -24 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER A -23 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER A -22 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY A -21 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH LEU A -20 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH VAL A -19 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH PRO A -18 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH ARG A -17 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY A -16 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER A -15 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS A -14 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH MET A -13 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH ALA A -12 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER A -11 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH MET A -10 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH THR A -9 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY A -8 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY A -7 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLN A -6 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLN A -5 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH MET A -4 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY A -3 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH ARG A -2 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY A -1 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER A 0 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH MET B -33 UNP A0A1B1Y6G INITIATING METHIONINE SEQADV 9JOH GLY B -32 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER B -31 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER B -30 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS B -29 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS B -28 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS B -27 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS B -26 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS B -25 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS B -24 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER B -23 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER B -22 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY B -21 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH LEU B -20 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH VAL B -19 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH PRO B -18 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH ARG B -17 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY B -16 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER B -15 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH HIS B -14 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH MET B -13 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH ALA B -12 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER B -11 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH MET B -10 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH THR B -9 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY B -8 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY B -7 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLN B -6 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLN B -5 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH MET B -4 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY B -3 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH ARG B -2 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH GLY B -1 UNP A0A1B1Y6G EXPRESSION TAG SEQADV 9JOH SER B 0 UNP A0A1B1Y6G EXPRESSION TAG SEQRES 1 A 423 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 423 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 423 GLY GLN GLN MET GLY ARG GLY SER SER THR LYS ASN GLY SEQRES 4 A 423 ILE ILE GLU LEU GLU GLN GLU THR GLU GLU GLU LEU GLU SEQRES 5 A 423 GLN ASN GLN GLU ILE ASP TYR SER ASN TYR PRO GLU PHE SEQRES 6 A 423 SER TRP ASP THR MET PRO LEU TYR MET HIS VAL ARG LYS SEQRES 7 A 423 ASN THR ALA TYR THR ASP GLU GLU ILE ASN TYR LEU ALA SEQRES 8 A 423 SER PHE PRO LEU ILE THR LEU GLU LYS SER GLN ALA GLN SEQRES 9 A 423 ASN THR TYR GLY SER THR GLU GLU GLY THR LEU ALA THR SEQRES 10 A 423 ALA SER ALA ILE LYS LEU LYS ASN ASN LYS ALA LYS VAL SEQRES 11 A 423 LEU TYR TYR ARG ASN VAL VAL ILE ASN TRP GLY ASN TYR SEQRES 12 A 423 LYS ASN ASP ASP GLU PHE ILE SER LYS ASN PRO SER ALA SEQRES 13 A 423 LEU LEU LYS ASN GLN ASN ASN GLU LEU VAL TYR MET PRO SEQRES 14 A 423 ASN GLY SER THR PRO PHE PHE ASP ILE THR LYS SER PHE SEQRES 15 A 423 VAL GLN GLU TYR TRP LEU LYS SER VAL GLU ASP MET VAL SEQRES 16 A 423 ALA THR PRO ASN ILE ASP GLY THR PHE ILE ASP ALA ASN SEQRES 17 A 423 ILE LYS VAL LEU VAL PRO SER PHE PHE SER SER LYS VAL SEQRES 18 A 423 GLY VAL ASN LYS GLN ALA GLU ILE GLU ASN SER TYR PHE SEQRES 19 A 423 SER MET MET SER ARG LEU LYS GLU SER LEU SER ASN ASN SEQRES 20 A 423 LEU ILE LEU ALA ASN ILE ILE ARG VAL ARG PRO GLU PHE SEQRES 21 A 423 GLU GLU ASN GLY LEU GLU TYR LEU GLY TYR PHE ASN GLY SEQRES 22 A 423 SER TYR LEU GLU GLY PHE ASP SER GLU ALA PHE GLY MET SEQRES 23 A 423 SER ASN ALA GLU TYR LEU VAL GLU GLY ILE GLU ALA THR SEQRES 24 A 423 GLN LYS ALA ALA GLN SER GLY LYS ILE ILE THR MET THR SEQRES 25 A 423 LEU GLY LEU GLY GLU ALA ILE ASP ASN ASN THR GLY ILE SEQRES 26 A 423 ASP ASP GLN ARG GLU ASP VAL ASP LEU ASN ASP GLU GLU SEQRES 27 A 423 LEU ASN LYS ARG VAL ASP TYR LEU LEU ALA ILE PHE LEU SEQRES 28 A 423 ILE CYS ALA GLU LYS TYR SER TYR VAL TYR LEU HIS ASP SEQRES 29 A 423 GLY TYR LEU ALA THR ASN SER ALA VAL TRP LEU HIS GLN SEQRES 30 A 423 PHE ASP GLN TYR LYS LYS ALA LEU GLY ALA PRO LEU GLY SEQRES 31 A 423 LYS ALA ILE LYS ASN GLY TYR ILE TYR THR ARG LYS PHE SEQRES 32 A 423 GLU ASN LEU ASP VAL TRP LEU ASN LEU GLU THR GLN THR SEQRES 33 A 423 ALA THR LEU THR TRP LYS GLU SEQRES 1 B 423 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 423 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 B 423 GLY GLN GLN MET GLY ARG GLY SER SER THR LYS ASN GLY SEQRES 4 B 423 ILE ILE GLU LEU GLU GLN GLU THR GLU GLU GLU LEU GLU SEQRES 5 B 423 GLN ASN GLN GLU ILE ASP TYR SER ASN TYR PRO GLU PHE SEQRES 6 B 423 SER TRP ASP THR MET PRO LEU TYR MET HIS VAL ARG LYS SEQRES 7 B 423 ASN THR ALA TYR THR ASP GLU GLU ILE ASN TYR LEU ALA SEQRES 8 B 423 SER PHE PRO LEU ILE THR LEU GLU LYS SER GLN ALA GLN SEQRES 9 B 423 ASN THR TYR GLY SER THR GLU GLU GLY THR LEU ALA THR SEQRES 10 B 423 ALA SER ALA ILE LYS LEU LYS ASN ASN LYS ALA LYS VAL SEQRES 11 B 423 LEU TYR TYR ARG ASN VAL VAL ILE ASN TRP GLY ASN TYR SEQRES 12 B 423 LYS ASN ASP ASP GLU PHE ILE SER LYS ASN PRO SER ALA SEQRES 13 B 423 LEU LEU LYS ASN GLN ASN ASN GLU LEU VAL TYR MET PRO SEQRES 14 B 423 ASN GLY SER THR PRO PHE PHE ASP ILE THR LYS SER PHE SEQRES 15 B 423 VAL GLN GLU TYR TRP LEU LYS SER VAL GLU ASP MET VAL SEQRES 16 B 423 ALA THR PRO ASN ILE ASP GLY THR PHE ILE ASP ALA ASN SEQRES 17 B 423 ILE LYS VAL LEU VAL PRO SER PHE PHE SER SER LYS VAL SEQRES 18 B 423 GLY VAL ASN LYS GLN ALA GLU ILE GLU ASN SER TYR PHE SEQRES 19 B 423 SER MET MET SER ARG LEU LYS GLU SER LEU SER ASN ASN SEQRES 20 B 423 LEU ILE LEU ALA ASN ILE ILE ARG VAL ARG PRO GLU PHE SEQRES 21 B 423 GLU GLU ASN GLY LEU GLU TYR LEU GLY TYR PHE ASN GLY SEQRES 22 B 423 SER TYR LEU GLU GLY PHE ASP SER GLU ALA PHE GLY MET SEQRES 23 B 423 SER ASN ALA GLU TYR LEU VAL GLU GLY ILE GLU ALA THR SEQRES 24 B 423 GLN LYS ALA ALA GLN SER GLY LYS ILE ILE THR MET THR SEQRES 25 B 423 LEU GLY LEU GLY GLU ALA ILE ASP ASN ASN THR GLY ILE SEQRES 26 B 423 ASP ASP GLN ARG GLU ASP VAL ASP LEU ASN ASP GLU GLU SEQRES 27 B 423 LEU ASN LYS ARG VAL ASP TYR LEU LEU ALA ILE PHE LEU SEQRES 28 B 423 ILE CYS ALA GLU LYS TYR SER TYR VAL TYR LEU HIS ASP SEQRES 29 B 423 GLY TYR LEU ALA THR ASN SER ALA VAL TRP LEU HIS GLN SEQRES 30 B 423 PHE ASP GLN TYR LYS LYS ALA LEU GLY ALA PRO LEU GLY SEQRES 31 B 423 LYS ALA ILE LYS ASN GLY TYR ILE TYR THR ARG LYS PHE SEQRES 32 B 423 GLU ASN LEU ASP VAL TRP LEU ASN LEU GLU THR GLN THR SEQRES 33 B 423 ALA THR LEU THR TRP LYS GLU HET X6Y D 1 25 HET X2Y D 2 26 HET FUC D 3 20 HET X6Y D 4 24 HET X6Y C 1 25 HET X2Y C 2 26 HET FUC C 3 20 HET X6Y C 4 24 HETNAM X6Y 2-O-SULFO-ALPHA-L-FUCOPYRANOSE HETNAM X2Y 2,4-DI-O-SULFO-ALPHA-L-FUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN X6Y 6-DEOXY-2-O-SULFO-ALPHA-L-GALACTOPYRANOSE HETSYN X2Y 6-DEOXY-2,4-DI-O-SULFO-ALPHA-L-GALACTOPYRANOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 X6Y 4(C6 H12 O8 S) FORMUL 3 X2Y 2(C6 H12 O11 S2) FORMUL 3 FUC 2(C6 H12 O5) FORMUL 5 HOH *1456(H2 O) HELIX 1 AA1 THR A 49 SER A 58 1 10 HELIX 2 AA2 ALA A 69 GLY A 74 1 6 HELIX 3 AA3 SER A 75 ASN A 91 1 17 HELIX 4 AA4 TYR A 109 ASN A 119 1 11 HELIX 5 AA5 PRO A 120 LEU A 123 5 4 HELIX 6 AA6 LYS A 146 ALA A 162 1 17 HELIX 7 AA7 ALA A 173 VAL A 179 1 7 HELIX 8 AA8 VAL A 179 GLY A 188 1 10 HELIX 9 AA9 GLY A 188 LEU A 210 1 23 HELIX 10 AB1 GLY A 230 PHE A 237 5 8 HELIX 11 AB2 SER A 253 SER A 271 1 19 HELIX 12 AB3 LEU A 281 ASP A 286 1 6 HELIX 13 AB4 ASP A 302 ALA A 320 1 19 HELIX 14 AB5 LEU A 333 SER A 337 5 5 HELIX 15 AB6 PHE A 344 LYS A 348 5 5 HELIX 16 AB7 THR B 49 SER B 58 1 10 HELIX 17 AB8 ALA B 69 GLY B 74 1 6 HELIX 18 AB9 SER B 75 ASN B 91 1 17 HELIX 19 AC1 TYR B 109 ASN B 119 1 11 HELIX 20 AC2 PRO B 120 LEU B 123 5 4 HELIX 21 AC3 LYS B 146 THR B 163 1 18 HELIX 22 AC4 ALA B 173 VAL B 179 1 7 HELIX 23 AC5 PRO B 180 GLY B 188 1 9 HELIX 24 AC6 GLY B 188 LEU B 210 1 23 HELIX 25 AC7 GLY B 230 PHE B 237 5 8 HELIX 26 AC8 SER B 253 SER B 271 1 19 HELIX 27 AC9 LEU B 281 ASP B 286 1 6 HELIX 28 AD1 ASP B 302 ALA B 320 1 19 HELIX 29 AD2 LEU B 333 SER B 337 5 5 HELIX 30 AD3 PHE B 344 LYS B 348 5 5 SHEET 1 AA1 8 TYR A 39 LYS A 44 0 SHEET 2 AA1 8 LEU A 61 GLN A 68 1 O THR A 63 N MET A 40 SHEET 3 AA1 8 LYS A 95 ASN A 101 1 O LEU A 97 N ILE A 62 SHEET 4 AA1 8 GLY A 168 ASP A 172 1 O PHE A 170 N ARG A 100 SHEET 5 AA1 8 LEU A 214 ASN A 218 1 O LEU A 216 N ILE A 171 SHEET 6 AA1 8 GLY A 239 LEU A 242 1 O TYR A 241 N ALA A 217 SHEET 7 AA1 8 ILE A 274 GLY A 280 1 O THR A 276 N LEU A 242 SHEET 8 AA1 8 SER A 324 HIS A 329 1 O TYR A 325 N MET A 277 SHEET 1 AA2 4 ILE A 359 ASN A 361 0 SHEET 2 AA2 4 ILE A 364 PHE A 369 -1 O ILE A 364 N ASN A 361 SHEET 3 AA2 4 LEU A 372 ASN A 377 -1 O LEU A 372 N PHE A 369 SHEET 4 AA2 4 THR A 382 TRP A 387 -1 O THR A 382 N ASN A 377 SHEET 1 AA3 8 TYR B 39 LYS B 44 0 SHEET 2 AA3 8 LEU B 61 GLN B 68 1 O THR B 63 N MET B 40 SHEET 3 AA3 8 LYS B 95 ASN B 101 1 O LEU B 97 N ILE B 62 SHEET 4 AA3 8 GLY B 168 ASP B 172 1 O PHE B 170 N ARG B 100 SHEET 5 AA3 8 LEU B 214 ASN B 218 1 O LEU B 216 N ILE B 171 SHEET 6 AA3 8 GLY B 239 LEU B 242 1 O TYR B 241 N ALA B 217 SHEET 7 AA3 8 ILE B 274 GLY B 280 1 O THR B 276 N LEU B 242 SHEET 8 AA3 8 SER B 324 HIS B 329 1 O TYR B 325 N ILE B 275 SHEET 1 AA4 4 ILE B 359 ASN B 361 0 SHEET 2 AA4 4 ILE B 364 PHE B 369 -1 O ILE B 364 N ASN B 361 SHEET 3 AA4 4 LEU B 372 ASN B 377 -1 O LEU B 372 N PHE B 369 SHEET 4 AA4 4 THR B 382 TRP B 387 -1 O THR B 382 N ASN B 377 LINK O3 X6Y D 1 C1 X2Y D 2 1555 1555 1.40 LINK O3 X2Y D 2 C1 FUC D 3 1555 1555 1.39 LINK O3 FUC D 3 C1 X6Y D 4 1555 1555 1.43 LINK O3 X6Y C 1 C1 X2Y C 2 1555 1555 1.41 LINK O3 X2Y C 2 C1 FUC C 3 1555 1555 1.39 LINK O3 FUC C 3 C1 X6Y C 4 1555 1555 1.45 CRYST1 54.659 138.577 63.038 90.00 113.77 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018295 0.000000 0.008058 0.00000 SCALE2 0.000000 0.007216 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017334 0.00000