HEADER DNA BINDING PROTEIN 30-SEP-24 9JS5 TITLE CRYSTAL STRUCTURE OF THE ASFV-DERIVED HISTONE-LIKE PROTEIN PA104R COMPND MOL_ID: 1; COMPND 2 MOLECULE: VIRAL HISTONE-LIKE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PA104R,DNA-BINDING PROTEIN PA104R; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AFRICAN SWINE FEVER VIRUS; SOURCE 3 ORGANISM_TAXID: 10497; SOURCE 4 GENE: A104R, A104R CDS, BA71V-A104R, AFSV47SS_0056, ASFV-GEORGIA_4- SOURCE 5 058, ASFVARMWT4_00043; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ASFV, PA104R, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Q.LI,H.SHAO,D.YI,S.CEN REVDAT 1 30-APR-25 9JS5 0 JRNL AUTH Q.J.LI,H.H.SHAO,L.L.ZHENG,Q.LIU,C.C.HUO,D.R.YI,T.FENG,S.CEN JRNL TITL THONNINGIANIN A DISRUPTS PA104R-DNA BINDING AND INHIBITS JRNL TITL 2 AFRICAN SWINE FEVER VIRUS REPLICATION. JRNL REF EMERG MICROBES INFECT V. 14 82697 2025 JRNL REFN ESSN 2222-1751 JRNL PMID 40138179 JRNL DOI 10.1080/22221751.2025.2482697 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.890 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 48848 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.580 REMARK 3 FREE R VALUE TEST SET COUNT : 2237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8800 - 4.5300 1.00 2915 152 0.1675 0.1918 REMARK 3 2 4.5300 - 3.6000 1.00 2892 144 0.1518 0.1880 REMARK 3 3 3.6000 - 3.1500 1.00 2937 123 0.2018 0.2566 REMARK 3 4 3.1400 - 2.8600 1.00 2904 140 0.2402 0.2505 REMARK 3 5 2.8600 - 2.6500 1.00 2892 152 0.2153 0.2820 REMARK 3 6 2.6500 - 2.5000 1.00 2908 156 0.2343 0.3046 REMARK 3 7 2.5000 - 2.3700 1.00 2929 182 0.2417 0.2882 REMARK 3 8 2.3700 - 2.2700 1.00 2951 96 0.2370 0.2891 REMARK 3 9 2.2700 - 2.1800 1.00 2929 114 0.1872 0.2139 REMARK 3 10 2.1800 - 2.1100 1.00 2936 114 0.2050 0.2780 REMARK 3 11 2.1100 - 2.0400 1.00 2893 170 0.2141 0.2688 REMARK 3 12 2.0400 - 1.9800 1.00 2899 130 0.2280 0.2671 REMARK 3 13 1.9800 - 1.9300 1.00 2925 122 0.1979 0.2294 REMARK 3 14 1.9300 - 1.8800 1.00 2947 140 0.2210 0.2906 REMARK 3 15 1.8800 - 1.8400 1.00 2858 174 0.2329 0.2581 REMARK 3 16 1.8400 - 1.8000 1.00 2896 128 0.2510 0.3062 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.184 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.012 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1612 REMARK 3 ANGLE : 0.943 2180 REMARK 3 CHIRALITY : 0.065 256 REMARK 3 PLANARITY : 0.008 272 REMARK 3 DIHEDRAL : 5.687 206 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2415 -0.2146 10.9462 REMARK 3 T TENSOR REMARK 3 T11: 0.2745 T22: 0.2719 REMARK 3 T33: 0.3299 T12: -0.0040 REMARK 3 T13: -0.0135 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.6647 L22: 1.9219 REMARK 3 L33: 3.5409 L12: -0.7561 REMARK 3 L13: 0.0967 L23: -0.8300 REMARK 3 S TENSOR REMARK 3 S11: 0.1099 S12: 0.1031 S13: 0.0486 REMARK 3 S21: -0.1170 S22: -0.0947 S23: 0.1883 REMARK 3 S31: 0.1925 S32: -0.2573 S33: -0.0117 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8235 14.5698 9.2863 REMARK 3 T TENSOR REMARK 3 T11: 0.3531 T22: 0.3445 REMARK 3 T33: 0.3574 T12: 0.0584 REMARK 3 T13: -0.0122 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 2.0980 L22: 1.2883 REMARK 3 L33: 2.9108 L12: 1.8366 REMARK 3 L13: -2.5445 L23: -1.8824 REMARK 3 S TENSOR REMARK 3 S11: 0.2730 S12: 0.2298 S13: 0.3203 REMARK 3 S21: 0.1838 S22: 0.0716 S23: 0.5593 REMARK 3 S31: -0.6235 S32: -0.5189 S33: -0.0931 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5322 13.0436 -0.4691 REMARK 3 T TENSOR REMARK 3 T11: 0.3136 T22: 0.2987 REMARK 3 T33: 0.2952 T12: -0.0093 REMARK 3 T13: 0.0330 T23: 0.0478 REMARK 3 L TENSOR REMARK 3 L11: 1.1902 L22: -0.1895 REMARK 3 L33: 1.5744 L12: 0.4475 REMARK 3 L13: 1.3118 L23: 0.3350 REMARK 3 S TENSOR REMARK 3 S11: -0.0277 S12: 0.1706 S13: -0.0123 REMARK 3 S21: -0.0411 S22: -0.0316 S23: -0.0515 REMARK 3 S31: -0.1585 S32: 0.2469 S33: 0.0186 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0543 20.1225 -31.6311 REMARK 3 T TENSOR REMARK 3 T11: 0.3562 T22: 0.4826 REMARK 3 T33: 0.2677 T12: -0.0416 REMARK 3 T13: -0.0261 T23: 0.1124 REMARK 3 L TENSOR REMARK 3 L11: 4.3706 L22: 1.4379 REMARK 3 L33: 3.3274 L12: 1.8148 REMARK 3 L13: 2.2667 L23: 2.2973 REMARK 3 S TENSOR REMARK 3 S11: -0.2968 S12: 0.0050 S13: 0.1360 REMARK 3 S21: 0.0048 S22: -0.0797 S23: 0.2348 REMARK 3 S31: 0.0100 S32: 0.3866 S33: 0.0006 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6649 23.9538 -24.4359 REMARK 3 T TENSOR REMARK 3 T11: 0.4447 T22: 0.4867 REMARK 3 T33: 0.3790 T12: -0.0918 REMARK 3 T13: -0.0663 T23: 0.0720 REMARK 3 L TENSOR REMARK 3 L11: 4.4866 L22: 1.4780 REMARK 3 L33: 6.8829 L12: 1.3362 REMARK 3 L13: 5.2704 L23: 1.6423 REMARK 3 S TENSOR REMARK 3 S11: -0.6848 S12: 0.1146 S13: -0.0746 REMARK 3 S21: 0.2525 S22: 0.3910 S23: 0.4612 REMARK 3 S31: -1.3882 S32: 0.2962 S33: 0.0534 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5101 13.5833 -6.8574 REMARK 3 T TENSOR REMARK 3 T11: 0.3376 T22: 0.3597 REMARK 3 T33: 0.3004 T12: -0.0152 REMARK 3 T13: 0.0201 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.4624 L22: 7.1394 REMARK 3 L33: 2.9288 L12: -0.6901 REMARK 3 L13: 0.4164 L23: -3.9985 REMARK 3 S TENSOR REMARK 3 S11: -0.0131 S12: 0.3331 S13: -0.1966 REMARK 3 S21: -0.3990 S22: 0.0681 S23: -0.2631 REMARK 3 S31: -0.0130 S32: 0.1716 S33: 0.0513 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0700 -4.3113 0.6957 REMARK 3 T TENSOR REMARK 3 T11: 0.3864 T22: 0.3533 REMARK 3 T33: 0.4138 T12: 0.0433 REMARK 3 T13: -0.0220 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 1.0541 L22: 3.6669 REMARK 3 L33: 0.2022 L12: 2.1460 REMARK 3 L13: 0.3410 L23: 0.6067 REMARK 3 S TENSOR REMARK 3 S11: -0.0640 S12: 0.1954 S13: -0.3379 REMARK 3 S21: -0.1011 S22: 0.0855 S23: -0.6754 REMARK 3 S31: 0.4258 S32: 0.1839 S33: 0.0004 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6229 13.3869 14.3451 REMARK 3 T TENSOR REMARK 3 T11: 0.3145 T22: 0.2651 REMARK 3 T33: 0.3205 T12: -0.0057 REMARK 3 T13: -0.0293 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 2.9856 L22: 2.0280 REMARK 3 L33: 3.6170 L12: 1.0550 REMARK 3 L13: -1.5124 L23: -1.3842 REMARK 3 S TENSOR REMARK 3 S11: 0.0633 S12: -0.1370 S13: -0.0256 REMARK 3 S21: 0.1535 S22: -0.2058 S23: -0.0335 REMARK 3 S31: -0.3663 S32: 0.0418 S33: -0.0407 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 32 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8710 -1.5457 11.3949 REMARK 3 T TENSOR REMARK 3 T11: 0.3053 T22: 0.2312 REMARK 3 T33: 0.2688 T12: 0.0125 REMARK 3 T13: 0.0321 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.9084 L22: 3.3705 REMARK 3 L33: 4.0804 L12: 1.1732 REMARK 3 L13: 0.9880 L23: 2.7783 REMARK 3 S TENSOR REMARK 3 S11: 0.1814 S12: -0.1440 S13: 0.1190 REMARK 3 S21: 0.4853 S22: -0.1745 S23: 0.1264 REMARK 3 S31: 0.6097 S32: 0.0802 S33: -0.0509 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3121 -1.0506 -2.2475 REMARK 3 T TENSOR REMARK 3 T11: 0.3329 T22: 0.3067 REMARK 3 T33: 0.3566 T12: 0.0078 REMARK 3 T13: -0.0282 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 1.2410 L22: 1.3815 REMARK 3 L33: 1.8923 L12: -0.0512 REMARK 3 L13: -1.1951 L23: 1.2527 REMARK 3 S TENSOR REMARK 3 S11: 0.0520 S12: 0.1260 S13: 0.0655 REMARK 3 S21: -0.1341 S22: -0.0471 S23: 0.0679 REMARK 3 S31: 0.0827 S32: -0.4197 S33: 0.0389 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 70 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2409 0.0375 -22.3142 REMARK 3 T TENSOR REMARK 3 T11: 0.3174 T22: 0.4177 REMARK 3 T33: 0.2880 T12: -0.0420 REMARK 3 T13: 0.0619 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 2.0165 L22: 2.7335 REMARK 3 L33: 1.3457 L12: 2.8118 REMARK 3 L13: 0.0205 L23: -1.2881 REMARK 3 S TENSOR REMARK 3 S11: -0.2947 S12: 0.7984 S13: -0.4028 REMARK 3 S21: -0.0824 S22: 0.2995 S23: -0.2837 REMARK 3 S31: 0.1471 S32: -0.1522 S33: -0.0066 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 85 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.4264 -5.9029 -17.3172 REMARK 3 T TENSOR REMARK 3 T11: 0.3923 T22: 0.3666 REMARK 3 T33: 0.3928 T12: -0.0553 REMARK 3 T13: -0.0029 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 4.3796 L22: 4.6336 REMARK 3 L33: 1.0405 L12: 4.6153 REMARK 3 L13: -2.1994 L23: -2.5898 REMARK 3 S TENSOR REMARK 3 S11: 0.4256 S12: -0.5937 S13: -0.7799 REMARK 3 S21: 0.4937 S22: -0.5574 S23: -0.5259 REMARK 3 S31: -0.1120 S32: 0.3537 S33: 0.0702 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 94 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3499 -2.2217 -6.8819 REMARK 3 T TENSOR REMARK 3 T11: 0.3924 T22: 0.3277 REMARK 3 T33: 0.3284 T12: 0.0104 REMARK 3 T13: -0.0234 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.9335 L22: 8.7469 REMARK 3 L33: 1.0299 L12: -2.8368 REMARK 3 L13: -1.2709 L23: 3.5186 REMARK 3 S TENSOR REMARK 3 S11: 0.2314 S12: 0.2968 S13: -0.3231 REMARK 3 S21: -0.2524 S22: -0.1479 S23: 0.8847 REMARK 3 S31: 0.1534 S32: -0.5431 S33: -0.0269 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 102 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2507 16.1398 -4.4728 REMARK 3 T TENSOR REMARK 3 T11: 0.5129 T22: 0.3842 REMARK 3 T33: 0.4620 T12: 0.0633 REMARK 3 T13: -0.0104 T23: 0.0896 REMARK 3 L TENSOR REMARK 3 L11: 2.0973 L22: 2.6665 REMARK 3 L33: 1.5797 L12: 1.1471 REMARK 3 L13: -0.3099 L23: -0.5255 REMARK 3 S TENSOR REMARK 3 S11: -0.0430 S12: 0.7576 S13: 1.0183 REMARK 3 S21: -0.6325 S22: -0.1430 S23: 0.9413 REMARK 3 S31: -0.9700 S32: -0.2827 S33: 0.0049 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9JS5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 04-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1300051472. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97851 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48848 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 29.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 17.90 REMARK 200 R MERGE (I) : 0.07458 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.2400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.62580 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6LMH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.6 M AMMONIUM SULFATE, 0.1M CITRIC REMARK 280 ACID, PH 4.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 101.56333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.78167 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 50.78167 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 101.56333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -176.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 27.82400 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 48.19258 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 50.78167 REMARK 350 BIOMT1 4 -0.500000 -0.866025 0.000000 27.82400 REMARK 350 BIOMT2 4 -0.866025 0.500000 0.000000 48.19258 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -50.78167 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -105.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 27.82400 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 48.19258 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -50.78167 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 339 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 347 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 356 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 LYS A 10 REMARK 465 LYS A 11 REMARK 465 MET B 7 REMARK 465 SER B 8 REMARK 465 THR B 9 REMARK 465 LYS B 10 REMARK 465 LYS B 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 304 O HOH A 380 2.07 REMARK 500 OE1 GLU A 84 O HOH A 301 2.10 REMARK 500 REMARK 500 REMARK: NULL DBREF1 9JS5 A 7 110 UNP A0A0A1E0L7_ASF DBREF2 9JS5 A A0A0A1E0L7 1 104 DBREF1 9JS5 B 7 110 UNP A0A0A1E0L7_ASF DBREF2 9JS5 B A0A0A1E0L7 1 104 SEQRES 1 A 104 MET SER THR LYS LYS LYS PRO THR ILE THR LYS GLN GLU SEQRES 2 A 104 LEU TYR SER LEU VAL ALA ALA ASP THR GLN LEU ASN LYS SEQRES 3 A 104 ALA LEU ILE GLU ARG ILE PHE THR SER GLN GLN LYS ILE SEQRES 4 A 104 ILE GLN ASN ALA LEU LYS HIS ASN GLN GLU VAL ILE ILE SEQRES 5 A 104 PRO PRO GLY ILE LYS PHE THR VAL VAL THR VAL LYS ALA SEQRES 6 A 104 LYS PRO ALA ARG GLN GLY HIS ASN PRO ALA THR GLY GLU SEQRES 7 A 104 PRO ILE GLN ILE LYS ALA LYS PRO GLU HIS LYS ALA VAL SEQRES 8 A 104 LYS ILE ARG ALA LEU LYS PRO VAL HIS ASP MET LEU ASN SEQRES 1 B 104 MET SER THR LYS LYS LYS PRO THR ILE THR LYS GLN GLU SEQRES 2 B 104 LEU TYR SER LEU VAL ALA ALA ASP THR GLN LEU ASN LYS SEQRES 3 B 104 ALA LEU ILE GLU ARG ILE PHE THR SER GLN GLN LYS ILE SEQRES 4 B 104 ILE GLN ASN ALA LEU LYS HIS ASN GLN GLU VAL ILE ILE SEQRES 5 B 104 PRO PRO GLY ILE LYS PHE THR VAL VAL THR VAL LYS ALA SEQRES 6 B 104 LYS PRO ALA ARG GLN GLY HIS ASN PRO ALA THR GLY GLU SEQRES 7 B 104 PRO ILE GLN ILE LYS ALA LYS PRO GLU HIS LYS ALA VAL SEQRES 8 B 104 LYS ILE ARG ALA LEU LYS PRO VAL HIS ASP MET LEU ASN HET EDO A 201 4 HET SO4 A 202 5 HET SO4 A 203 5 HET SO4 A 204 5 HET EDO B 201 4 HET SO4 B 202 5 HET SO4 B 203 5 HET SO4 B 204 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 2(C2 H6 O2) FORMUL 4 SO4 6(O4 S 2-) FORMUL 11 HOH *146(H2 O) HELIX 1 AA1 THR A 16 GLN A 29 1 14 HELIX 2 AA2 ASN A 31 HIS A 52 1 22 HELIX 3 AA3 LEU A 102 ASP A 107 1 6 HELIX 4 AA4 THR B 16 GLN B 29 1 14 HELIX 5 AA5 ASN B 31 HIS B 52 1 22 HELIX 6 AA6 LEU B 102 ASP B 107 1 6 SHEET 1 AA1 4 THR A 14 ILE A 15 0 SHEET 2 AA1 4 GLU B 55 ILE B 58 1 O GLU B 55 N ILE A 15 SHEET 3 AA1 4 ILE B 62 VAL B 69 -1 O PHE B 64 N VAL B 56 SHEET 4 AA1 4 HIS B 94 ALA B 101 -1 O HIS B 94 N VAL B 69 SHEET 1 AA2 3 VAL A 56 ILE A 58 0 SHEET 2 AA2 3 ILE A 62 VAL A 69 -1 O PHE A 64 N VAL A 56 SHEET 3 AA2 3 HIS A 94 ALA A 101 -1 O HIS A 94 N VAL A 69 SHEET 1 AA3 2 ARG A 75 HIS A 78 0 SHEET 2 AA3 2 PRO A 85 ILE A 88 -1 O ILE A 86 N GLY A 77 SHEET 1 AA4 2 ARG B 75 HIS B 78 0 SHEET 2 AA4 2 PRO B 85 ILE B 88 -1 O ILE B 86 N GLY B 77 CISPEP 1 PRO A 59 PRO A 60 0 3.42 CISPEP 2 PRO B 59 PRO B 60 0 4.81 CRYST1 55.648 55.648 152.345 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017970 0.010375 0.000000 0.00000 SCALE2 0.000000 0.020750 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006564 0.00000 CONECT 1557 1558 1559 CONECT 1558 1557 CONECT 1559 1557 1560 CONECT 1560 1559 CONECT 1561 1562 1563 1564 1565 CONECT 1562 1561 CONECT 1563 1561 CONECT 1564 1561 CONECT 1565 1561 CONECT 1566 1567 1568 1569 1570 CONECT 1567 1566 CONECT 1568 1566 CONECT 1569 1566 CONECT 1570 1566 CONECT 1571 1572 1573 1574 1575 CONECT 1572 1571 CONECT 1573 1571 CONECT 1574 1571 CONECT 1575 1571 CONECT 1576 1577 1578 CONECT 1577 1576 CONECT 1578 1576 1579 CONECT 1579 1578 CONECT 1580 1581 1582 1583 1584 CONECT 1581 1580 CONECT 1582 1580 CONECT 1583 1580 CONECT 1584 1580 CONECT 1585 1586 1587 1588 1589 CONECT 1586 1585 CONECT 1587 1585 CONECT 1588 1585 CONECT 1589 1585 CONECT 1590 1591 1592 1593 1594 CONECT 1591 1590 CONECT 1592 1590 CONECT 1593 1590 CONECT 1594 1590 MASTER 501 0 8 6 11 0 0 6 1738 2 38 16 END