data_9JSF # _entry.id 9JSF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9JSF pdb_00009jsf 10.2210/pdb9jsf/pdb WWPDB D_1300052010 ? ? EMDB EMD-61771 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-05-14 ? 2 'EM metadata' 1 0 2025-05-14 ? 3 'Additional map' 1 0 2025-05-14 1 4 'Half map' 1 0 2025-05-14 1 5 'Half map' 1 0 2025-05-14 2 6 Image 1 0 2025-05-14 ? 7 'Primary map' 1 0 2025-05-14 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9JSF _pdbx_database_status.recvd_initial_deposition_date 2024-09-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Clostridium perfringens iota toxin pore Ib in prepore I state' _pdbx_database_related.db_id EMD-61771 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 6 _pdbx_contact_author.email tsuge@cc.kyoto-su.ac.jp _pdbx_contact_author.name_first Hideaki _pdbx_contact_author.name_last Tsuge _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0166-9163 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yamada, T.' 1 0000-0002-5828-3993 'Sugita, Y.' 2 0000-0001-6861-4840 'Yoshida, T.' 3 0000-0002-1384-2210 'Noda, T.' 4 0000-0002-0658-4663 'Tsuge, H.' 5 0000-0003-0166-9163 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Step-by-Step Maturation Mechanism of Binary Toxin Pore Revealed by Cryo-EM Analysis' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yamada, T.' 1 0000-0002-5828-3993 primary 'Sugita, Y.' 2 0000-0001-6861-4840 primary 'Yoshida, T.' 3 0000-0002-1384-2210 primary 'Noda, T.' 4 0000-0002-0658-4663 primary 'Tsuge, H.' 5 0000-0003-0166-9163 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Iota toxin component Ib' 58768.562 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EDLDTDNDNIPDAYEKNGYTIKDSIAVKWNDSFAEQGYKKYVSSYLESNTAGDPYTDYQKASGSIDKAIKLEARDPLVAA YPVVGVGMENLIISTNEHASSDQGKTVSRATTNSKTDANTVGVSISAGYQNGFTGNITTSYSHTTDNSTAVQDSNGESWN TGLSINKAESAYINANVRYYNTGTAPMYKVTPTTNLVLDGETLATIKAQDNQIGNNLSPNETYPKKGLSPLALNTMDQFN ARLIPINYDQLKKLDSGKQIKLETTQVSGNYGTKNSQGQIITEGNSWSNYISQIDSVSASIILDTGSQTFERRVAAKEQG NPEDKTPEITIGEAIKKAFSATKNGELLYFNGIPIDESCVELIFDDNTSEIIKEQLKYLDDKKIYNVKLERGMNILIKVP SYFTNFDEYNNFPASWSNIDTKNQDGLQSVANKLSGETKIIIPMSKLKPYKRYVFSGYSKDPSTSNSITVNIKSKEQKTD YLVPEKDYTKFSYEFETTGKDSSDIEITLTSSGVIFLDNLSITELNSTPEIL ; _entity_poly.pdbx_seq_one_letter_code_can ;EDLDTDNDNIPDAYEKNGYTIKDSIAVKWNDSFAEQGYKKYVSSYLESNTAGDPYTDYQKASGSIDKAIKLEARDPLVAA YPVVGVGMENLIISTNEHASSDQGKTVSRATTNSKTDANTVGVSISAGYQNGFTGNITTSYSHTTDNSTAVQDSNGESWN TGLSINKAESAYINANVRYYNTGTAPMYKVTPTTNLVLDGETLATIKAQDNQIGNNLSPNETYPKKGLSPLALNTMDQFN ARLIPINYDQLKKLDSGKQIKLETTQVSGNYGTKNSQGQIITEGNSWSNYISQIDSVSASIILDTGSQTFERRVAAKEQG NPEDKTPEITIGEAIKKAFSATKNGELLYFNGIPIDESCVELIFDDNTSEIIKEQLKYLDDKKIYNVKLERGMNILIKVP SYFTNFDEYNNFPASWSNIDTKNQDGLQSVANKLSGETKIIIPMSKLKPYKRYVFSGYSKDPSTSNSITVNIKSKEQKTD YLVPEKDYTKFSYEFETTGKDSSDIEITLTSSGVIFLDNLSITELNSTPEIL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'CALCIUM ION' _pdbx_entity_nonpoly.comp_id CA # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 ASP n 1 3 LEU n 1 4 ASP n 1 5 THR n 1 6 ASP n 1 7 ASN n 1 8 ASP n 1 9 ASN n 1 10 ILE n 1 11 PRO n 1 12 ASP n 1 13 ALA n 1 14 TYR n 1 15 GLU n 1 16 LYS n 1 17 ASN n 1 18 GLY n 1 19 TYR n 1 20 THR n 1 21 ILE n 1 22 LYS n 1 23 ASP n 1 24 SER n 1 25 ILE n 1 26 ALA n 1 27 VAL n 1 28 LYS n 1 29 TRP n 1 30 ASN n 1 31 ASP n 1 32 SER n 1 33 PHE n 1 34 ALA n 1 35 GLU n 1 36 GLN n 1 37 GLY n 1 38 TYR n 1 39 LYS n 1 40 LYS n 1 41 TYR n 1 42 VAL n 1 43 SER n 1 44 SER n 1 45 TYR n 1 46 LEU n 1 47 GLU n 1 48 SER n 1 49 ASN n 1 50 THR n 1 51 ALA n 1 52 GLY n 1 53 ASP n 1 54 PRO n 1 55 TYR n 1 56 THR n 1 57 ASP n 1 58 TYR n 1 59 GLN n 1 60 LYS n 1 61 ALA n 1 62 SER n 1 63 GLY n 1 64 SER n 1 65 ILE n 1 66 ASP n 1 67 LYS n 1 68 ALA n 1 69 ILE n 1 70 LYS n 1 71 LEU n 1 72 GLU n 1 73 ALA n 1 74 ARG n 1 75 ASP n 1 76 PRO n 1 77 LEU n 1 78 VAL n 1 79 ALA n 1 80 ALA n 1 81 TYR n 1 82 PRO n 1 83 VAL n 1 84 VAL n 1 85 GLY n 1 86 VAL n 1 87 GLY n 1 88 MET n 1 89 GLU n 1 90 ASN n 1 91 LEU n 1 92 ILE n 1 93 ILE n 1 94 SER n 1 95 THR n 1 96 ASN n 1 97 GLU n 1 98 HIS n 1 99 ALA n 1 100 SER n 1 101 SER n 1 102 ASP n 1 103 GLN n 1 104 GLY n 1 105 LYS n 1 106 THR n 1 107 VAL n 1 108 SER n 1 109 ARG n 1 110 ALA n 1 111 THR n 1 112 THR n 1 113 ASN n 1 114 SER n 1 115 LYS n 1 116 THR n 1 117 ASP n 1 118 ALA n 1 119 ASN n 1 120 THR n 1 121 VAL n 1 122 GLY n 1 123 VAL n 1 124 SER n 1 125 ILE n 1 126 SER n 1 127 ALA n 1 128 GLY n 1 129 TYR n 1 130 GLN n 1 131 ASN n 1 132 GLY n 1 133 PHE n 1 134 THR n 1 135 GLY n 1 136 ASN n 1 137 ILE n 1 138 THR n 1 139 THR n 1 140 SER n 1 141 TYR n 1 142 SER n 1 143 HIS n 1 144 THR n 1 145 THR n 1 146 ASP n 1 147 ASN n 1 148 SER n 1 149 THR n 1 150 ALA n 1 151 VAL n 1 152 GLN n 1 153 ASP n 1 154 SER n 1 155 ASN n 1 156 GLY n 1 157 GLU n 1 158 SER n 1 159 TRP n 1 160 ASN n 1 161 THR n 1 162 GLY n 1 163 LEU n 1 164 SER n 1 165 ILE n 1 166 ASN n 1 167 LYS n 1 168 ALA n 1 169 GLU n 1 170 SER n 1 171 ALA n 1 172 TYR n 1 173 ILE n 1 174 ASN n 1 175 ALA n 1 176 ASN n 1 177 VAL n 1 178 ARG n 1 179 TYR n 1 180 TYR n 1 181 ASN n 1 182 THR n 1 183 GLY n 1 184 THR n 1 185 ALA n 1 186 PRO n 1 187 MET n 1 188 TYR n 1 189 LYS n 1 190 VAL n 1 191 THR n 1 192 PRO n 1 193 THR n 1 194 THR n 1 195 ASN n 1 196 LEU n 1 197 VAL n 1 198 LEU n 1 199 ASP n 1 200 GLY n 1 201 GLU n 1 202 THR n 1 203 LEU n 1 204 ALA n 1 205 THR n 1 206 ILE n 1 207 LYS n 1 208 ALA n 1 209 GLN n 1 210 ASP n 1 211 ASN n 1 212 GLN n 1 213 ILE n 1 214 GLY n 1 215 ASN n 1 216 ASN n 1 217 LEU n 1 218 SER n 1 219 PRO n 1 220 ASN n 1 221 GLU n 1 222 THR n 1 223 TYR n 1 224 PRO n 1 225 LYS n 1 226 LYS n 1 227 GLY n 1 228 LEU n 1 229 SER n 1 230 PRO n 1 231 LEU n 1 232 ALA n 1 233 LEU n 1 234 ASN n 1 235 THR n 1 236 MET n 1 237 ASP n 1 238 GLN n 1 239 PHE n 1 240 ASN n 1 241 ALA n 1 242 ARG n 1 243 LEU n 1 244 ILE n 1 245 PRO n 1 246 ILE n 1 247 ASN n 1 248 TYR n 1 249 ASP n 1 250 GLN n 1 251 LEU n 1 252 LYS n 1 253 LYS n 1 254 LEU n 1 255 ASP n 1 256 SER n 1 257 GLY n 1 258 LYS n 1 259 GLN n 1 260 ILE n 1 261 LYS n 1 262 LEU n 1 263 GLU n 1 264 THR n 1 265 THR n 1 266 GLN n 1 267 VAL n 1 268 SER n 1 269 GLY n 1 270 ASN n 1 271 TYR n 1 272 GLY n 1 273 THR n 1 274 LYS n 1 275 ASN n 1 276 SER n 1 277 GLN n 1 278 GLY n 1 279 GLN n 1 280 ILE n 1 281 ILE n 1 282 THR n 1 283 GLU n 1 284 GLY n 1 285 ASN n 1 286 SER n 1 287 TRP n 1 288 SER n 1 289 ASN n 1 290 TYR n 1 291 ILE n 1 292 SER n 1 293 GLN n 1 294 ILE n 1 295 ASP n 1 296 SER n 1 297 VAL n 1 298 SER n 1 299 ALA n 1 300 SER n 1 301 ILE n 1 302 ILE n 1 303 LEU n 1 304 ASP n 1 305 THR n 1 306 GLY n 1 307 SER n 1 308 GLN n 1 309 THR n 1 310 PHE n 1 311 GLU n 1 312 ARG n 1 313 ARG n 1 314 VAL n 1 315 ALA n 1 316 ALA n 1 317 LYS n 1 318 GLU n 1 319 GLN n 1 320 GLY n 1 321 ASN n 1 322 PRO n 1 323 GLU n 1 324 ASP n 1 325 LYS n 1 326 THR n 1 327 PRO n 1 328 GLU n 1 329 ILE n 1 330 THR n 1 331 ILE n 1 332 GLY n 1 333 GLU n 1 334 ALA n 1 335 ILE n 1 336 LYS n 1 337 LYS n 1 338 ALA n 1 339 PHE n 1 340 SER n 1 341 ALA n 1 342 THR n 1 343 LYS n 1 344 ASN n 1 345 GLY n 1 346 GLU n 1 347 LEU n 1 348 LEU n 1 349 TYR n 1 350 PHE n 1 351 ASN n 1 352 GLY n 1 353 ILE n 1 354 PRO n 1 355 ILE n 1 356 ASP n 1 357 GLU n 1 358 SER n 1 359 CYS n 1 360 VAL n 1 361 GLU n 1 362 LEU n 1 363 ILE n 1 364 PHE n 1 365 ASP n 1 366 ASP n 1 367 ASN n 1 368 THR n 1 369 SER n 1 370 GLU n 1 371 ILE n 1 372 ILE n 1 373 LYS n 1 374 GLU n 1 375 GLN n 1 376 LEU n 1 377 LYS n 1 378 TYR n 1 379 LEU n 1 380 ASP n 1 381 ASP n 1 382 LYS n 1 383 LYS n 1 384 ILE n 1 385 TYR n 1 386 ASN n 1 387 VAL n 1 388 LYS n 1 389 LEU n 1 390 GLU n 1 391 ARG n 1 392 GLY n 1 393 MET n 1 394 ASN n 1 395 ILE n 1 396 LEU n 1 397 ILE n 1 398 LYS n 1 399 VAL n 1 400 PRO n 1 401 SER n 1 402 TYR n 1 403 PHE n 1 404 THR n 1 405 ASN n 1 406 PHE n 1 407 ASP n 1 408 GLU n 1 409 TYR n 1 410 ASN n 1 411 ASN n 1 412 PHE n 1 413 PRO n 1 414 ALA n 1 415 SER n 1 416 TRP n 1 417 SER n 1 418 ASN n 1 419 ILE n 1 420 ASP n 1 421 THR n 1 422 LYS n 1 423 ASN n 1 424 GLN n 1 425 ASP n 1 426 GLY n 1 427 LEU n 1 428 GLN n 1 429 SER n 1 430 VAL n 1 431 ALA n 1 432 ASN n 1 433 LYS n 1 434 LEU n 1 435 SER n 1 436 GLY n 1 437 GLU n 1 438 THR n 1 439 LYS n 1 440 ILE n 1 441 ILE n 1 442 ILE n 1 443 PRO n 1 444 MET n 1 445 SER n 1 446 LYS n 1 447 LEU n 1 448 LYS n 1 449 PRO n 1 450 TYR n 1 451 LYS n 1 452 ARG n 1 453 TYR n 1 454 VAL n 1 455 PHE n 1 456 SER n 1 457 GLY n 1 458 TYR n 1 459 SER n 1 460 LYS n 1 461 ASP n 1 462 PRO n 1 463 SER n 1 464 THR n 1 465 SER n 1 466 ASN n 1 467 SER n 1 468 ILE n 1 469 THR n 1 470 VAL n 1 471 ASN n 1 472 ILE n 1 473 LYS n 1 474 SER n 1 475 LYS n 1 476 GLU n 1 477 GLN n 1 478 LYS n 1 479 THR n 1 480 ASP n 1 481 TYR n 1 482 LEU n 1 483 VAL n 1 484 PRO n 1 485 GLU n 1 486 LYS n 1 487 ASP n 1 488 TYR n 1 489 THR n 1 490 LYS n 1 491 PHE n 1 492 SER n 1 493 TYR n 1 494 GLU n 1 495 PHE n 1 496 GLU n 1 497 THR n 1 498 THR n 1 499 GLY n 1 500 LYS n 1 501 ASP n 1 502 SER n 1 503 SER n 1 504 ASP n 1 505 ILE n 1 506 GLU n 1 507 ILE n 1 508 THR n 1 509 LEU n 1 510 THR n 1 511 SER n 1 512 SER n 1 513 GLY n 1 514 VAL n 1 515 ILE n 1 516 PHE n 1 517 LEU n 1 518 ASP n 1 519 ASN n 1 520 LEU n 1 521 SER n 1 522 ILE n 1 523 THR n 1 524 GLU n 1 525 LEU n 1 526 ASN n 1 527 SER n 1 528 THR n 1 529 PRO n 1 530 GLU n 1 531 ILE n 1 532 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 532 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NCIB 10748' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium perfringens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1502 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET23a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 216 216 GLU GLU A . n A 1 2 ASP 2 217 217 ASP ASP A . n A 1 3 LEU 3 218 218 LEU LEU A . n A 1 4 ASP 4 219 219 ASP ASP A . n A 1 5 THR 5 220 220 THR THR A . n A 1 6 ASP 6 221 221 ASP ASP A . n A 1 7 ASN 7 222 222 ASN ASN A . n A 1 8 ASP 8 223 223 ASP ASP A . n A 1 9 ASN 9 224 224 ASN ASN A . n A 1 10 ILE 10 225 225 ILE ILE A . n A 1 11 PRO 11 226 226 PRO PRO A . n A 1 12 ASP 12 227 227 ASP ASP A . n A 1 13 ALA 13 228 228 ALA ALA A . n A 1 14 TYR 14 229 229 TYR TYR A . n A 1 15 GLU 15 230 230 GLU GLU A . n A 1 16 LYS 16 231 231 LYS LYS A . n A 1 17 ASN 17 232 232 ASN ASN A . n A 1 18 GLY 18 233 233 GLY GLY A . n A 1 19 TYR 19 234 234 TYR TYR A . n A 1 20 THR 20 235 235 THR THR A . n A 1 21 ILE 21 236 236 ILE ILE A . n A 1 22 LYS 22 237 237 LYS LYS A . n A 1 23 ASP 23 238 238 ASP ASP A . n A 1 24 SER 24 239 239 SER SER A . n A 1 25 ILE 25 240 240 ILE ILE A . n A 1 26 ALA 26 241 241 ALA ALA A . n A 1 27 VAL 27 242 242 VAL VAL A . n A 1 28 LYS 28 243 243 LYS LYS A . n A 1 29 TRP 29 244 244 TRP TRP A . n A 1 30 ASN 30 245 245 ASN ASN A . n A 1 31 ASP 31 246 246 ASP ASP A . n A 1 32 SER 32 247 247 SER SER A . n A 1 33 PHE 33 248 248 PHE PHE A . n A 1 34 ALA 34 249 249 ALA ALA A . n A 1 35 GLU 35 250 250 GLU GLU A . n A 1 36 GLN 36 251 251 GLN GLN A . n A 1 37 GLY 37 252 252 GLY GLY A . n A 1 38 TYR 38 253 253 TYR TYR A . n A 1 39 LYS 39 254 254 LYS LYS A . n A 1 40 LYS 40 255 255 LYS LYS A . n A 1 41 TYR 41 256 256 TYR TYR A . n A 1 42 VAL 42 257 257 VAL VAL A . n A 1 43 SER 43 258 258 SER SER A . n A 1 44 SER 44 259 259 SER SER A . n A 1 45 TYR 45 260 260 TYR TYR A . n A 1 46 LEU 46 261 261 LEU LEU A . n A 1 47 GLU 47 262 262 GLU GLU A . n A 1 48 SER 48 263 263 SER SER A . n A 1 49 ASN 49 264 264 ASN ASN A . n A 1 50 THR 50 265 265 THR THR A . n A 1 51 ALA 51 266 266 ALA ALA A . n A 1 52 GLY 52 267 267 GLY GLY A . n A 1 53 ASP 53 268 268 ASP ASP A . n A 1 54 PRO 54 269 269 PRO PRO A . n A 1 55 TYR 55 270 270 TYR TYR A . n A 1 56 THR 56 271 271 THR THR A . n A 1 57 ASP 57 272 272 ASP ASP A . n A 1 58 TYR 58 273 273 TYR TYR A . n A 1 59 GLN 59 274 274 GLN GLN A . n A 1 60 LYS 60 275 275 LYS LYS A . n A 1 61 ALA 61 276 276 ALA ALA A . n A 1 62 SER 62 277 277 SER SER A . n A 1 63 GLY 63 278 278 GLY GLY A . n A 1 64 SER 64 279 279 SER SER A . n A 1 65 ILE 65 280 280 ILE ILE A . n A 1 66 ASP 66 281 281 ASP ASP A . n A 1 67 LYS 67 282 282 LYS LYS A . n A 1 68 ALA 68 283 283 ALA ALA A . n A 1 69 ILE 69 284 284 ILE ILE A . n A 1 70 LYS 70 285 285 LYS LYS A . n A 1 71 LEU 71 286 286 LEU LEU A . n A 1 72 GLU 72 287 287 GLU GLU A . n A 1 73 ALA 73 288 288 ALA ALA A . n A 1 74 ARG 74 289 289 ARG ARG A . n A 1 75 ASP 75 290 290 ASP ASP A . n A 1 76 PRO 76 291 291 PRO PRO A . n A 1 77 LEU 77 292 292 LEU LEU A . n A 1 78 VAL 78 293 293 VAL VAL A . n A 1 79 ALA 79 294 294 ALA ALA A . n A 1 80 ALA 80 295 295 ALA ALA A . n A 1 81 TYR 81 296 296 TYR TYR A . n A 1 82 PRO 82 297 297 PRO PRO A . n A 1 83 VAL 83 298 298 VAL VAL A . n A 1 84 VAL 84 299 299 VAL VAL A . n A 1 85 GLY 85 300 300 GLY GLY A . n A 1 86 VAL 86 301 301 VAL VAL A . n A 1 87 GLY 87 302 302 GLY GLY A . n A 1 88 MET 88 303 303 MET MET A . n A 1 89 GLU 89 304 304 GLU GLU A . n A 1 90 ASN 90 305 305 ASN ASN A . n A 1 91 LEU 91 306 306 LEU LEU A . n A 1 92 ILE 92 307 307 ILE ILE A . n A 1 93 ILE 93 308 308 ILE ILE A . n A 1 94 SER 94 309 ? ? ? A . n A 1 95 THR 95 310 ? ? ? A . n A 1 96 ASN 96 311 ? ? ? A . n A 1 97 GLU 97 312 ? ? ? A . n A 1 98 HIS 98 313 ? ? ? A . n A 1 99 ALA 99 314 ? ? ? A . n A 1 100 SER 100 315 ? ? ? A . n A 1 101 SER 101 316 ? ? ? A . n A 1 102 ASP 102 317 ? ? ? A . n A 1 103 GLN 103 318 ? ? ? A . n A 1 104 GLY 104 319 ? ? ? A . n A 1 105 LYS 105 320 ? ? ? A . n A 1 106 THR 106 321 ? ? ? A . n A 1 107 VAL 107 322 ? ? ? A . n A 1 108 SER 108 323 323 SER SER A . n A 1 109 ARG 109 324 324 ARG ARG A . n A 1 110 ALA 110 325 325 ALA ALA A . n A 1 111 THR 111 326 326 THR THR A . n A 1 112 THR 112 327 327 THR THR A . n A 1 113 ASN 113 328 328 ASN ASN A . n A 1 114 SER 114 329 329 SER SER A . n A 1 115 LYS 115 330 330 LYS LYS A . n A 1 116 THR 116 331 331 THR THR A . n A 1 117 ASP 117 332 332 ASP ASP A . n A 1 118 ALA 118 333 333 ALA ALA A . n A 1 119 ASN 119 334 334 ASN ASN A . n A 1 120 THR 120 335 335 THR THR A . n A 1 121 VAL 121 336 336 VAL VAL A . n A 1 122 GLY 122 337 337 GLY GLY A . n A 1 123 VAL 123 338 338 VAL VAL A . n A 1 124 SER 124 339 339 SER SER A . n A 1 125 ILE 125 340 340 ILE ILE A . n A 1 126 SER 126 341 341 SER SER A . n A 1 127 ALA 127 342 342 ALA ALA A . n A 1 128 GLY 128 343 343 GLY GLY A . n A 1 129 TYR 129 344 344 TYR TYR A . n A 1 130 GLN 130 345 345 GLN GLN A . n A 1 131 ASN 131 346 346 ASN ASN A . n A 1 132 GLY 132 347 347 GLY GLY A . n A 1 133 PHE 133 348 348 PHE PHE A . n A 1 134 THR 134 349 349 THR THR A . n A 1 135 GLY 135 350 350 GLY GLY A . n A 1 136 ASN 136 351 351 ASN ASN A . n A 1 137 ILE 137 352 352 ILE ILE A . n A 1 138 THR 138 353 353 THR THR A . n A 1 139 THR 139 354 354 THR THR A . n A 1 140 SER 140 355 355 SER SER A . n A 1 141 TYR 141 356 356 TYR TYR A . n A 1 142 SER 142 357 357 SER SER A . n A 1 143 HIS 143 358 358 HIS HIS A . n A 1 144 THR 144 359 359 THR THR A . n A 1 145 THR 145 360 360 THR THR A . n A 1 146 ASP 146 361 361 ASP ASP A . n A 1 147 ASN 147 362 362 ASN ASN A . n A 1 148 SER 148 363 363 SER SER A . n A 1 149 THR 149 364 364 THR THR A . n A 1 150 ALA 150 365 365 ALA ALA A . n A 1 151 VAL 151 366 366 VAL VAL A . n A 1 152 GLN 152 367 367 GLN GLN A . n A 1 153 ASP 153 368 368 ASP ASP A . n A 1 154 SER 154 369 369 SER SER A . n A 1 155 ASN 155 370 370 ASN ASN A . n A 1 156 GLY 156 371 371 GLY GLY A . n A 1 157 GLU 157 372 372 GLU GLU A . n A 1 158 SER 158 373 373 SER SER A . n A 1 159 TRP 159 374 374 TRP TRP A . n A 1 160 ASN 160 375 375 ASN ASN A . n A 1 161 THR 161 376 376 THR THR A . n A 1 162 GLY 162 377 377 GLY GLY A . n A 1 163 LEU 163 378 378 LEU LEU A . n A 1 164 SER 164 379 379 SER SER A . n A 1 165 ILE 165 380 380 ILE ILE A . n A 1 166 ASN 166 381 381 ASN ASN A . n A 1 167 LYS 167 382 382 LYS LYS A . n A 1 168 ALA 168 383 383 ALA ALA A . n A 1 169 GLU 169 384 384 GLU GLU A . n A 1 170 SER 170 385 385 SER SER A . n A 1 171 ALA 171 386 386 ALA ALA A . n A 1 172 TYR 172 387 387 TYR TYR A . n A 1 173 ILE 173 388 388 ILE ILE A . n A 1 174 ASN 174 389 389 ASN ASN A . n A 1 175 ALA 175 390 390 ALA ALA A . n A 1 176 ASN 176 391 391 ASN ASN A . n A 1 177 VAL 177 392 392 VAL VAL A . n A 1 178 ARG 178 393 393 ARG ARG A . n A 1 179 TYR 179 394 394 TYR TYR A . n A 1 180 TYR 180 395 395 TYR TYR A . n A 1 181 ASN 181 396 396 ASN ASN A . n A 1 182 THR 182 397 397 THR THR A . n A 1 183 GLY 183 398 398 GLY GLY A . n A 1 184 THR 184 399 399 THR THR A . n A 1 185 ALA 185 400 400 ALA ALA A . n A 1 186 PRO 186 401 401 PRO PRO A . n A 1 187 MET 187 402 402 MET MET A . n A 1 188 TYR 188 403 403 TYR TYR A . n A 1 189 LYS 189 404 404 LYS LYS A . n A 1 190 VAL 190 405 405 VAL VAL A . n A 1 191 THR 191 406 406 THR THR A . n A 1 192 PRO 192 407 407 PRO PRO A . n A 1 193 THR 193 408 408 THR THR A . n A 1 194 THR 194 409 409 THR THR A . n A 1 195 ASN 195 410 410 ASN ASN A . n A 1 196 LEU 196 411 411 LEU LEU A . n A 1 197 VAL 197 412 412 VAL VAL A . n A 1 198 LEU 198 413 413 LEU LEU A . n A 1 199 ASP 199 414 414 ASP ASP A . n A 1 200 GLY 200 415 415 GLY GLY A . n A 1 201 GLU 201 416 416 GLU GLU A . n A 1 202 THR 202 417 417 THR THR A . n A 1 203 LEU 203 418 418 LEU LEU A . n A 1 204 ALA 204 419 419 ALA ALA A . n A 1 205 THR 205 420 420 THR THR A . n A 1 206 ILE 206 421 421 ILE ILE A . n A 1 207 LYS 207 422 422 LYS LYS A . n A 1 208 ALA 208 423 423 ALA ALA A . n A 1 209 GLN 209 424 424 GLN GLN A . n A 1 210 ASP 210 425 425 ASP ASP A . n A 1 211 ASN 211 426 426 ASN ASN A . n A 1 212 GLN 212 427 427 GLN GLN A . n A 1 213 ILE 213 428 428 ILE ILE A . n A 1 214 GLY 214 429 429 GLY GLY A . n A 1 215 ASN 215 430 430 ASN ASN A . n A 1 216 ASN 216 431 431 ASN ASN A . n A 1 217 LEU 217 432 432 LEU LEU A . n A 1 218 SER 218 433 433 SER SER A . n A 1 219 PRO 219 434 434 PRO PRO A . n A 1 220 ASN 220 435 435 ASN ASN A . n A 1 221 GLU 221 436 436 GLU GLU A . n A 1 222 THR 222 437 437 THR THR A . n A 1 223 TYR 223 438 438 TYR TYR A . n A 1 224 PRO 224 439 439 PRO PRO A . n A 1 225 LYS 225 440 440 LYS LYS A . n A 1 226 LYS 226 441 441 LYS LYS A . n A 1 227 GLY 227 442 442 GLY GLY A . n A 1 228 LEU 228 443 443 LEU LEU A . n A 1 229 SER 229 444 444 SER SER A . n A 1 230 PRO 230 445 445 PRO PRO A . n A 1 231 LEU 231 446 446 LEU LEU A . n A 1 232 ALA 232 447 447 ALA ALA A . n A 1 233 LEU 233 448 448 LEU LEU A . n A 1 234 ASN 234 449 449 ASN ASN A . n A 1 235 THR 235 450 ? ? ? A . n A 1 236 MET 236 451 ? ? ? A . n A 1 237 ASP 237 452 ? ? ? A . n A 1 238 GLN 238 453 ? ? ? A . n A 1 239 PHE 239 454 ? ? ? A . n A 1 240 ASN 240 455 ? ? ? A . n A 1 241 ALA 241 456 ? ? ? A . n A 1 242 ARG 242 457 ? ? ? A . n A 1 243 LEU 243 458 ? ? ? A . n A 1 244 ILE 244 459 459 ILE ILE A . n A 1 245 PRO 245 460 460 PRO PRO A . n A 1 246 ILE 246 461 461 ILE ILE A . n A 1 247 ASN 247 462 462 ASN ASN A . n A 1 248 TYR 248 463 463 TYR TYR A . n A 1 249 ASP 249 464 464 ASP ASP A . n A 1 250 GLN 250 465 465 GLN GLN A . n A 1 251 LEU 251 466 466 LEU LEU A . n A 1 252 LYS 252 467 467 LYS LYS A . n A 1 253 LYS 253 468 468 LYS LYS A . n A 1 254 LEU 254 469 469 LEU LEU A . n A 1 255 ASP 255 470 470 ASP ASP A . n A 1 256 SER 256 471 471 SER SER A . n A 1 257 GLY 257 472 472 GLY GLY A . n A 1 258 LYS 258 473 473 LYS LYS A . n A 1 259 GLN 259 474 474 GLN GLN A . n A 1 260 ILE 260 475 475 ILE ILE A . n A 1 261 LYS 261 476 476 LYS LYS A . n A 1 262 LEU 262 477 477 LEU LEU A . n A 1 263 GLU 263 478 478 GLU GLU A . n A 1 264 THR 264 479 479 THR THR A . n A 1 265 THR 265 480 480 THR THR A . n A 1 266 GLN 266 481 481 GLN GLN A . n A 1 267 VAL 267 482 482 VAL VAL A . n A 1 268 SER 268 483 483 SER SER A . n A 1 269 GLY 269 484 484 GLY GLY A . n A 1 270 ASN 270 485 485 ASN ASN A . n A 1 271 TYR 271 486 486 TYR TYR A . n A 1 272 GLY 272 487 487 GLY GLY A . n A 1 273 THR 273 488 488 THR THR A . n A 1 274 LYS 274 489 489 LYS LYS A . n A 1 275 ASN 275 490 490 ASN ASN A . n A 1 276 SER 276 491 491 SER SER A . n A 1 277 GLN 277 492 492 GLN GLN A . n A 1 278 GLY 278 493 493 GLY GLY A . n A 1 279 GLN 279 494 494 GLN GLN A . n A 1 280 ILE 280 495 495 ILE ILE A . n A 1 281 ILE 281 496 496 ILE ILE A . n A 1 282 THR 282 497 497 THR THR A . n A 1 283 GLU 283 498 498 GLU GLU A . n A 1 284 GLY 284 499 499 GLY GLY A . n A 1 285 ASN 285 500 500 ASN ASN A . n A 1 286 SER 286 501 501 SER SER A . n A 1 287 TRP 287 502 502 TRP TRP A . n A 1 288 SER 288 503 503 SER SER A . n A 1 289 ASN 289 504 504 ASN ASN A . n A 1 290 TYR 290 505 505 TYR TYR A . n A 1 291 ILE 291 506 506 ILE ILE A . n A 1 292 SER 292 507 507 SER SER A . n A 1 293 GLN 293 508 508 GLN GLN A . n A 1 294 ILE 294 509 509 ILE ILE A . n A 1 295 ASP 295 510 510 ASP ASP A . n A 1 296 SER 296 511 511 SER SER A . n A 1 297 VAL 297 512 512 VAL VAL A . n A 1 298 SER 298 513 513 SER SER A . n A 1 299 ALA 299 514 514 ALA ALA A . n A 1 300 SER 300 515 515 SER SER A . n A 1 301 ILE 301 516 516 ILE ILE A . n A 1 302 ILE 302 517 517 ILE ILE A . n A 1 303 LEU 303 518 518 LEU LEU A . n A 1 304 ASP 304 519 519 ASP ASP A . n A 1 305 THR 305 520 520 THR THR A . n A 1 306 GLY 306 521 521 GLY GLY A . n A 1 307 SER 307 522 522 SER SER A . n A 1 308 GLN 308 523 523 GLN GLN A . n A 1 309 THR 309 524 524 THR THR A . n A 1 310 PHE 310 525 525 PHE PHE A . n A 1 311 GLU 311 526 526 GLU GLU A . n A 1 312 ARG 312 527 527 ARG ARG A . n A 1 313 ARG 313 528 528 ARG ARG A . n A 1 314 VAL 314 529 529 VAL VAL A . n A 1 315 ALA 315 530 530 ALA ALA A . n A 1 316 ALA 316 531 531 ALA ALA A . n A 1 317 LYS 317 532 532 LYS LYS A . n A 1 318 GLU 318 533 533 GLU GLU A . n A 1 319 GLN 319 534 534 GLN GLN A . n A 1 320 GLY 320 535 535 GLY GLY A . n A 1 321 ASN 321 536 536 ASN ASN A . n A 1 322 PRO 322 537 537 PRO PRO A . n A 1 323 GLU 323 538 538 GLU GLU A . n A 1 324 ASP 324 539 539 ASP ASP A . n A 1 325 LYS 325 540 540 LYS LYS A . n A 1 326 THR 326 541 541 THR THR A . n A 1 327 PRO 327 542 542 PRO PRO A . n A 1 328 GLU 328 543 543 GLU GLU A . n A 1 329 ILE 329 544 544 ILE ILE A . n A 1 330 THR 330 545 545 THR THR A . n A 1 331 ILE 331 546 546 ILE ILE A . n A 1 332 GLY 332 547 547 GLY GLY A . n A 1 333 GLU 333 548 548 GLU GLU A . n A 1 334 ALA 334 549 549 ALA ALA A . n A 1 335 ILE 335 550 550 ILE ILE A . n A 1 336 LYS 336 551 551 LYS LYS A . n A 1 337 LYS 337 552 552 LYS LYS A . n A 1 338 ALA 338 553 553 ALA ALA A . n A 1 339 PHE 339 554 554 PHE PHE A . n A 1 340 SER 340 555 555 SER SER A . n A 1 341 ALA 341 556 556 ALA ALA A . n A 1 342 THR 342 557 557 THR THR A . n A 1 343 LYS 343 558 558 LYS LYS A . n A 1 344 ASN 344 559 559 ASN ASN A . n A 1 345 GLY 345 560 560 GLY GLY A . n A 1 346 GLU 346 561 561 GLU GLU A . n A 1 347 LEU 347 562 562 LEU LEU A . n A 1 348 LEU 348 563 563 LEU LEU A . n A 1 349 TYR 349 564 564 TYR TYR A . n A 1 350 PHE 350 565 565 PHE PHE A . n A 1 351 ASN 351 566 566 ASN ASN A . n A 1 352 GLY 352 567 567 GLY GLY A . n A 1 353 ILE 353 568 568 ILE ILE A . n A 1 354 PRO 354 569 569 PRO PRO A . n A 1 355 ILE 355 570 570 ILE ILE A . n A 1 356 ASP 356 571 571 ASP ASP A . n A 1 357 GLU 357 572 572 GLU GLU A . n A 1 358 SER 358 573 573 SER SER A . n A 1 359 CYS 359 574 574 CYS CYS A . n A 1 360 VAL 360 575 575 VAL VAL A . n A 1 361 GLU 361 576 576 GLU GLU A . n A 1 362 LEU 362 577 577 LEU LEU A . n A 1 363 ILE 363 578 578 ILE ILE A . n A 1 364 PHE 364 579 579 PHE PHE A . n A 1 365 ASP 365 580 580 ASP ASP A . n A 1 366 ASP 366 581 581 ASP ASP A . n A 1 367 ASN 367 582 582 ASN ASN A . n A 1 368 THR 368 583 583 THR THR A . n A 1 369 SER 369 584 584 SER SER A . n A 1 370 GLU 370 585 585 GLU GLU A . n A 1 371 ILE 371 586 586 ILE ILE A . n A 1 372 ILE 372 587 587 ILE ILE A . n A 1 373 LYS 373 588 588 LYS LYS A . n A 1 374 GLU 374 589 589 GLU GLU A . n A 1 375 GLN 375 590 590 GLN GLN A . n A 1 376 LEU 376 591 591 LEU LEU A . n A 1 377 LYS 377 592 592 LYS LYS A . n A 1 378 TYR 378 593 593 TYR TYR A . n A 1 379 LEU 379 594 594 LEU LEU A . n A 1 380 ASP 380 595 595 ASP ASP A . n A 1 381 ASP 381 596 596 ASP ASP A . n A 1 382 LYS 382 597 597 LYS LYS A . n A 1 383 LYS 383 598 598 LYS LYS A . n A 1 384 ILE 384 599 599 ILE ILE A . n A 1 385 TYR 385 600 600 TYR TYR A . n A 1 386 ASN 386 601 601 ASN ASN A . n A 1 387 VAL 387 602 602 VAL VAL A . n A 1 388 LYS 388 603 603 LYS LYS A . n A 1 389 LEU 389 604 604 LEU LEU A . n A 1 390 GLU 390 605 605 GLU GLU A . n A 1 391 ARG 391 606 606 ARG ARG A . n A 1 392 GLY 392 607 607 GLY GLY A . n A 1 393 MET 393 608 608 MET MET A . n A 1 394 ASN 394 609 609 ASN ASN A . n A 1 395 ILE 395 610 610 ILE ILE A . n A 1 396 LEU 396 611 611 LEU LEU A . n A 1 397 ILE 397 612 612 ILE ILE A . n A 1 398 LYS 398 613 613 LYS LYS A . n A 1 399 VAL 399 614 614 VAL VAL A . n A 1 400 PRO 400 615 615 PRO PRO A . n A 1 401 SER 401 616 616 SER SER A . n A 1 402 TYR 402 617 617 TYR TYR A . n A 1 403 PHE 403 618 618 PHE PHE A . n A 1 404 THR 404 619 619 THR THR A . n A 1 405 ASN 405 620 620 ASN ASN A . n A 1 406 PHE 406 621 621 PHE PHE A . n A 1 407 ASP 407 622 622 ASP ASP A . n A 1 408 GLU 408 623 623 GLU GLU A . n A 1 409 TYR 409 624 624 TYR TYR A . n A 1 410 ASN 410 625 625 ASN ASN A . n A 1 411 ASN 411 626 626 ASN ASN A . n A 1 412 PHE 412 627 627 PHE PHE A . n A 1 413 PRO 413 628 628 PRO PRO A . n A 1 414 ALA 414 629 629 ALA ALA A . n A 1 415 SER 415 630 630 SER SER A . n A 1 416 TRP 416 631 631 TRP TRP A . n A 1 417 SER 417 632 632 SER SER A . n A 1 418 ASN 418 633 633 ASN ASN A . n A 1 419 ILE 419 634 634 ILE ILE A . n A 1 420 ASP 420 635 635 ASP ASP A . n A 1 421 THR 421 636 636 THR THR A . n A 1 422 LYS 422 637 637 LYS LYS A . n A 1 423 ASN 423 638 638 ASN ASN A . n A 1 424 GLN 424 639 639 GLN GLN A . n A 1 425 ASP 425 640 640 ASP ASP A . n A 1 426 GLY 426 641 641 GLY GLY A . n A 1 427 LEU 427 642 642 LEU LEU A . n A 1 428 GLN 428 643 643 GLN GLN A . n A 1 429 SER 429 644 644 SER SER A . n A 1 430 VAL 430 645 645 VAL VAL A . n A 1 431 ALA 431 646 646 ALA ALA A . n A 1 432 ASN 432 647 647 ASN ASN A . n A 1 433 LYS 433 648 648 LYS LYS A . n A 1 434 LEU 434 649 649 LEU LEU A . n A 1 435 SER 435 650 650 SER SER A . n A 1 436 GLY 436 651 651 GLY GLY A . n A 1 437 GLU 437 652 652 GLU GLU A . n A 1 438 THR 438 653 653 THR THR A . n A 1 439 LYS 439 654 654 LYS LYS A . n A 1 440 ILE 440 655 655 ILE ILE A . n A 1 441 ILE 441 656 656 ILE ILE A . n A 1 442 ILE 442 657 657 ILE ILE A . n A 1 443 PRO 443 658 658 PRO PRO A . n A 1 444 MET 444 659 659 MET MET A . n A 1 445 SER 445 660 660 SER SER A . n A 1 446 LYS 446 661 661 LYS LYS A . n A 1 447 LEU 447 662 662 LEU LEU A . n A 1 448 LYS 448 663 663 LYS LYS A . n A 1 449 PRO 449 664 664 PRO PRO A . n A 1 450 TYR 450 665 665 TYR TYR A . n A 1 451 LYS 451 666 666 LYS LYS A . n A 1 452 ARG 452 667 667 ARG ARG A . n A 1 453 TYR 453 668 668 TYR TYR A . n A 1 454 VAL 454 669 669 VAL VAL A . n A 1 455 PHE 455 670 670 PHE PHE A . n A 1 456 SER 456 671 671 SER SER A . n A 1 457 GLY 457 672 672 GLY GLY A . n A 1 458 TYR 458 673 673 TYR TYR A . n A 1 459 SER 459 674 674 SER SER A . n A 1 460 LYS 460 675 675 LYS LYS A . n A 1 461 ASP 461 676 676 ASP ASP A . n A 1 462 PRO 462 677 677 PRO PRO A . n A 1 463 SER 463 678 678 SER SER A . n A 1 464 THR 464 679 679 THR THR A . n A 1 465 SER 465 680 680 SER SER A . n A 1 466 ASN 466 681 681 ASN ASN A . n A 1 467 SER 467 682 682 SER SER A . n A 1 468 ILE 468 683 683 ILE ILE A . n A 1 469 THR 469 684 684 THR THR A . n A 1 470 VAL 470 685 685 VAL VAL A . n A 1 471 ASN 471 686 686 ASN ASN A . n A 1 472 ILE 472 687 687 ILE ILE A . n A 1 473 LYS 473 688 688 LYS LYS A . n A 1 474 SER 474 689 689 SER SER A . n A 1 475 LYS 475 690 690 LYS LYS A . n A 1 476 GLU 476 691 691 GLU GLU A . n A 1 477 GLN 477 692 692 GLN GLN A . n A 1 478 LYS 478 693 693 LYS LYS A . n A 1 479 THR 479 694 694 THR THR A . n A 1 480 ASP 480 695 695 ASP ASP A . n A 1 481 TYR 481 696 696 TYR TYR A . n A 1 482 LEU 482 697 697 LEU LEU A . n A 1 483 VAL 483 698 698 VAL VAL A . n A 1 484 PRO 484 699 699 PRO PRO A . n A 1 485 GLU 485 700 700 GLU GLU A . n A 1 486 LYS 486 701 701 LYS LYS A . n A 1 487 ASP 487 702 702 ASP ASP A . n A 1 488 TYR 488 703 703 TYR TYR A . n A 1 489 THR 489 704 704 THR THR A . n A 1 490 LYS 490 705 705 LYS LYS A . n A 1 491 PHE 491 706 706 PHE PHE A . n A 1 492 SER 492 707 707 SER SER A . n A 1 493 TYR 493 708 708 TYR TYR A . n A 1 494 GLU 494 709 709 GLU GLU A . n A 1 495 PHE 495 710 710 PHE PHE A . n A 1 496 GLU 496 711 711 GLU GLU A . n A 1 497 THR 497 712 712 THR THR A . n A 1 498 THR 498 713 713 THR THR A . n A 1 499 GLY 499 714 714 GLY GLY A . n A 1 500 LYS 500 715 715 LYS LYS A . n A 1 501 ASP 501 716 716 ASP ASP A . n A 1 502 SER 502 717 717 SER SER A . n A 1 503 SER 503 718 718 SER SER A . n A 1 504 ASP 504 719 719 ASP ASP A . n A 1 505 ILE 505 720 720 ILE ILE A . n A 1 506 GLU 506 721 721 GLU GLU A . n A 1 507 ILE 507 722 722 ILE ILE A . n A 1 508 THR 508 723 723 THR THR A . n A 1 509 LEU 509 724 724 LEU LEU A . n A 1 510 THR 510 725 725 THR THR A . n A 1 511 SER 511 726 726 SER SER A . n A 1 512 SER 512 727 727 SER SER A . n A 1 513 GLY 513 728 728 GLY GLY A . n A 1 514 VAL 514 729 729 VAL VAL A . n A 1 515 ILE 515 730 730 ILE ILE A . n A 1 516 PHE 516 731 731 PHE PHE A . n A 1 517 LEU 517 732 732 LEU LEU A . n A 1 518 ASP 518 733 733 ASP ASP A . n A 1 519 ASN 519 734 734 ASN ASN A . n A 1 520 LEU 520 735 735 LEU LEU A . n A 1 521 SER 521 736 736 SER SER A . n A 1 522 ILE 522 737 737 ILE ILE A . n A 1 523 THR 523 738 738 THR THR A . n A 1 524 GLU 524 739 739 GLU GLU A . n A 1 525 LEU 525 740 740 LEU LEU A . n A 1 526 ASN 526 741 741 ASN ASN A . n A 1 527 SER 527 742 742 SER SER A . n A 1 528 THR 528 743 743 THR THR A . n A 1 529 PRO 529 744 744 PRO PRO A . n A 1 530 GLU 530 745 745 GLU GLU A . n A 1 531 ILE 531 746 746 ILE ILE A . n A 1 532 LEU 532 747 747 LEU LEU A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id CA _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id CA _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 801 1 CA CA A . C 2 CA 1 802 2 CA CA A . D 2 CA 1 803 3 CA CA A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A TYR 229 ? OH ? A TYR 14 OH 2 1 Y 1 A TYR 234 ? OH ? A TYR 19 OH 3 1 Y 1 A TRP 244 ? CH2 ? A TRP 29 CH2 4 1 Y 1 A TYR 253 ? OH ? A TYR 38 OH 5 1 Y 1 A TYR 256 ? OH ? A TYR 41 OH 6 1 Y 1 A TYR 260 ? OH ? A TYR 45 OH 7 1 Y 1 A TYR 270 ? OH ? A TYR 55 OH 8 1 Y 1 A TYR 273 ? OH ? A TYR 58 OH 9 1 Y 1 A ARG 289 ? NH1 ? A ARG 74 NH1 10 1 Y 1 A ARG 289 ? NH2 ? A ARG 74 NH2 11 1 Y 1 A TYR 296 ? OH ? A TYR 81 OH 12 1 Y 1 A ARG 324 ? NH1 ? A ARG 109 NH1 13 1 Y 1 A ARG 324 ? NH2 ? A ARG 109 NH2 14 1 Y 1 A TYR 344 ? OH ? A TYR 129 OH 15 1 Y 1 A TYR 356 ? OH ? A TYR 141 OH 16 1 Y 1 A TYR 387 ? OH ? A TYR 172 OH 17 1 Y 1 A ARG 393 ? NH1 ? A ARG 178 NH1 18 1 Y 1 A ARG 393 ? NH2 ? A ARG 178 NH2 19 1 Y 1 A TYR 394 ? OH ? A TYR 179 OH 20 1 Y 1 A TYR 395 ? OH ? A TYR 180 OH 21 1 Y 1 A TYR 403 ? OH ? A TYR 188 OH 22 1 Y 1 A TYR 438 ? OH ? A TYR 223 OH 23 1 Y 1 A TYR 463 ? OH ? A TYR 248 OH 24 1 Y 1 A TYR 486 ? OH ? A TYR 271 OH 25 1 Y 1 A TYR 505 ? OH ? A TYR 290 OH 26 1 Y 1 A ARG 527 ? NH1 ? A ARG 312 NH1 27 1 Y 1 A ARG 527 ? NH2 ? A ARG 312 NH2 28 1 Y 1 A ARG 528 ? NH1 ? A ARG 313 NH1 29 1 Y 1 A ARG 528 ? NH2 ? A ARG 313 NH2 30 1 Y 1 A TYR 564 ? OH ? A TYR 349 OH 31 1 Y 1 A TYR 593 ? OH ? A TYR 378 OH 32 1 Y 1 A TYR 600 ? OH ? A TYR 385 OH 33 1 Y 1 A ARG 606 ? NH1 ? A ARG 391 NH1 34 1 Y 1 A ARG 606 ? NH2 ? A ARG 391 NH2 35 1 Y 1 A TYR 617 ? OH ? A TYR 402 OH 36 1 Y 1 A TYR 624 ? OH ? A TYR 409 OH 37 1 Y 1 A TYR 665 ? OH ? A TYR 450 OH 38 1 Y 1 A ARG 667 ? NH1 ? A ARG 452 NH1 39 1 Y 1 A ARG 667 ? NH2 ? A ARG 452 NH2 40 1 Y 1 A TYR 668 ? OH ? A TYR 453 OH 41 1 Y 1 A TYR 673 ? OH ? A TYR 458 OH 42 1 Y 1 A TYR 696 ? OH ? A TYR 481 OH 43 1 Y 1 A TYR 703 ? OH ? A TYR 488 OH 44 1 Y 1 A TYR 708 ? OH ? A TYR 493 OH # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9JSF _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9JSF _struct.title 'Clostridium perfringens iota toxin pore Ib in prepore I state' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9JSF _struct_keywords.text 'Toxin, Prepore, Pre-pore, Pore, Translocation' _struct_keywords.pdbx_keywords TOXIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q46221_CLOPF _struct_ref.pdbx_db_accession Q46221 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EDLDTDNDNIPDAYEKNGYTIKDSIAVKWNDSFAEQGYKKYVSSYLESNTAGDPYTDYQKASGSIDKAIKLEARDPLVAA YPVVGVGMENLIISTNEHASSDQGKTVSRATTNSKTDANTVGVSISAGYQNGFTGNITTSYSHTTDNSTAVQDSNGESWN TGLSINKGESAYINANVRYYNTGTAPMYKVTPTTNLVLDGETLATIKAQDNQIGNNLSPNETYPKKGLSPLALNTMDQFN ARLIPINYDQLKKLDSGKQIKLETTQVSGNYGTKNSQGQIITEGNSWSNYISQIDSVSASIILDTGSQTFERRVAAKEQG NPEDKTPEITIGEAIKKAFSATKNGELLYFNGIPIDESCVELIFDDNTSEIIKEQLKYLDDKKIYNVKLERGMNILIKVP SYFTNFDEYNNFPASWSNIDTKNQDGLQSVANKLSGETKIIIPMSKLKPYKRYVFSGYSKDPSTSNSITVNIKSKEQKTD YLVPEKDYTKFSYEFETTGKDSSDIEITLTSSGVIFLDNLSITELNSTPEIL ; _struct_ref.pdbx_align_begin 216 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9JSF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 532 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q46221 _struct_ref_seq.db_align_beg 216 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 747 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 216 _struct_ref_seq.pdbx_auth_seq_align_end 747 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 9JSF _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 168 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q46221 _struct_ref_seq_dif.db_mon_id GLY _struct_ref_seq_dif.pdbx_seq_db_seq_num 383 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 383 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 13-meric _pdbx_struct_assembly.oligomeric_count 13 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3,4,5,6,7,8,9,10,11,12,13 A,B,C,D 1 14 A,B,C,D 1 15 A,B,C,D 1 16 A,B,C,D 1 17 A,B,C,D 1 18 A,B,C,D 1 19 A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 1.0 0.0 2 'point symmetry operation' ? ? 0.623291 -0.781990 -0.000081 111.13946 0.781990 0.623291 -0.000084 -38.87662 0.000116 -0.000011 1.0 -0.00225 3 'point symmetry operation' ? ? -0.222602 -0.974909 -0.000095 210.79385 0.974909 -0.222602 -0.000014 23.74812 -0.000008 -0.000096 1.0 -0.00017 4 'point symmetry operation' ? ? -0.900910 -0.434006 0.000057 223.98159 0.434006 -0.900910 -0.000124 140.70227 0.000105 -0.000087 1.0 -0.00800 5 'point symmetry operation' ? ? -0.900969 0.433884 -0.000002 140.71585 -0.433884 -0.900969 -0.000001 223.94860 -0.000002 -0.0 1.0 -0.00287 6 'point symmetry operation' ? ? -0.222506 0.974931 -0.000034 23.75673 -0.974931 -0.222506 0.000222 210.78752 0.000209 0.000083 1.0 -0.02743 7 'point symmetry operation' ? ? 0.623684 0.781677 -0.000049 -38.88180 -0.781677 0.623684 0.000089 111.05509 0.000100 -0.000018 1.0 -0.01687 8 'point symmetry operation' ? ? 0.623291 -0.781990 -0.000081 111.13946 0.781990 0.623291 -0.000084 -38.87662 0.000116 -0.000011 1.0 -0.00225 9 'point symmetry operation' ? ? -0.222602 -0.974909 -0.000095 210.79385 0.974909 -0.222602 -0.000014 23.74812 -0.000008 -0.000096 1.0 -0.00017 10 'point symmetry operation' ? ? -0.900910 -0.434006 0.000057 223.98159 0.434006 -0.900910 -0.000124 140.70227 0.000105 -0.000087 1.0 -0.00800 11 'point symmetry operation' ? ? -0.900969 0.433884 -0.000002 140.71585 -0.433884 -0.900969 -0.000001 223.94860 -0.000002 -0.0 1.0 -0.00287 12 'point symmetry operation' ? ? -0.222506 0.974931 -0.000034 23.75673 -0.974931 -0.222506 0.000222 210.78752 0.000209 0.000083 1.0 -0.02743 13 'point symmetry operation' ? ? 0.623684 0.781677 -0.000049 -38.88180 -0.781677 0.623684 0.000089 111.05509 0.000100 -0.000018 1.0 -0.01687 14 'point symmetry operation' ? ? 0.623291 -0.781990 -0.000081 111.13946 0.781990 0.623291 -0.000084 -38.87662 0.000116 -0.000011 1.000000 -0.00225 15 'point symmetry operation' ? ? -0.222602 -0.974909 -0.000095 210.79385 0.974909 -0.222602 -0.000014 23.74812 -0.000008 -0.000096 1.000000 -0.00017 16 'point symmetry operation' ? ? -0.900910 -0.434006 0.000057 223.98159 0.434006 -0.900910 -0.000124 140.70227 0.000105 -0.000087 1.000000 -0.00800 17 'point symmetry operation' ? ? -0.900969 0.433884 -0.000002 140.71585 -0.433884 -0.900969 -0.000001 223.94860 -0.000002 -0.000000 1.000000 -0.00287 18 'point symmetry operation' ? ? -0.222506 0.974931 -0.000034 23.75673 -0.974931 -0.222506 0.000222 210.78752 0.000209 0.000083 1.000000 -0.02743 19 'point symmetry operation' ? ? 0.623684 0.781677 -0.000049 -38.88180 -0.781677 0.623684 0.000089 111.05509 0.000100 -0.000018 1.000000 -0.01687 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 11 ? GLY A 18 ? PRO A 226 GLY A 233 1 ? 8 HELX_P HELX_P2 AA2 ASN A 30 ? GLY A 37 ? ASN A 245 GLY A 252 5 ? 8 HELX_P HELX_P3 AA3 THR A 56 ? GLY A 63 ? THR A 271 GLY A 278 1 ? 8 HELX_P HELX_P4 AA4 LYS A 70 ? ASP A 75 ? LYS A 285 ASP A 290 5 ? 6 HELX_P HELX_P5 AA5 THR A 116 ? GLY A 122 ? THR A 331 GLY A 337 1 ? 7 HELX_P HELX_P6 AA6 ASN A 247 ? SER A 256 ? ASN A 462 SER A 471 1 ? 10 HELX_P HELX_P7 AA7 TRP A 287 ? SER A 296 ? TRP A 502 SER A 511 1 ? 10 HELX_P HELX_P8 AA8 THR A 330 ? SER A 340 ? THR A 545 SER A 555 1 ? 11 HELX_P HELX_P9 AA9 ASP A 365 ? LYS A 377 ? ASP A 580 LYS A 592 1 ? 13 HELX_P HELX_P10 AB1 LYS A 383 ? VAL A 387 ? LYS A 598 VAL A 602 5 ? 5 HELX_P HELX_P11 AB2 PRO A 443 ? LEU A 447 ? PRO A 658 LEU A 662 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 4 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 219 A CA 802 1_555 ? ? ? ? ? ? ? 2.416 ? ? metalc2 metalc ? ? A ASP 6 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 221 A CA 801 1_555 ? ? ? ? ? ? ? 2.362 ? ? metalc3 metalc ? ? A ASP 6 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 221 A CA 802 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc4 metalc ? ? A ASP 8 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 223 A CA 801 1_555 ? ? ? ? ? ? ? 2.968 ? ? metalc5 metalc ? ? A ASP 8 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 223 A CA 802 1_555 ? ? ? ? ? ? ? 2.419 ? ? metalc6 metalc ? ? A ILE 10 O ? ? ? 1_555 C CA . CA ? ? A ILE 225 A CA 802 1_555 ? ? ? ? ? ? ? 2.340 ? ? metalc7 metalc ? ? A GLU 15 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 230 A CA 801 1_555 ? ? ? ? ? ? ? 2.250 ? ? metalc8 metalc ? ? A GLU 15 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 230 A CA 802 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc9 metalc ? ? A SER 44 O ? ? ? 1_555 B CA . CA ? ? A SER 259 A CA 801 1_555 ? ? ? ? ? ? ? 2.444 ? ? metalc10 metalc ? ? A GLU 47 O ? ? ? 1_555 B CA . CA ? ? A GLU 262 A CA 801 1_555 ? ? ? ? ? ? ? 2.278 ? ? metalc11 metalc ? ? A ASP 57 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 272 A CA 801 1_555 ? ? ? ? ? ? ? 2.475 ? ? metalc12 metalc ? ? A ASN 405 O ? ? ? 1_555 D CA . CA ? ? A ASN 620 A CA 803 1_555 ? ? ? ? ? ? ? 2.572 ? ? metalc13 metalc ? ? A ASP 407 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 622 A CA 803 1_555 ? ? ? ? ? ? ? 3.005 ? ? metalc14 metalc ? ? A ASP 407 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 622 A CA 803 1_555 ? ? ? ? ? ? ? 2.532 ? ? metalc15 metalc ? ? A VAL 430 O ? ? ? 1_555 D CA . CA ? ? A VAL 645 A CA 803 1_555 ? ? ? ? ? ? ? 2.560 ? ? metalc16 metalc ? ? A ASP 518 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 733 A CA 803 1_555 ? ? ? ? ? ? ? 2.524 ? ? metalc17 metalc ? ? A ASP 518 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 733 A CA 803 1_555 ? ? ? ? ? ? ? 2.498 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 4 ? A ASP 219 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 OD1 ? A ASP 6 ? A ASP 221 ? 1_555 78.9 ? 2 OD1 ? A ASP 4 ? A ASP 219 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 OD1 ? A ASP 8 ? A ASP 223 ? 1_555 83.9 ? 3 OD1 ? A ASP 6 ? A ASP 221 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 OD1 ? A ASP 8 ? A ASP 223 ? 1_555 76.1 ? 4 OD1 ? A ASP 4 ? A ASP 219 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 O ? A ILE 10 ? A ILE 225 ? 1_555 72.5 ? 5 OD1 ? A ASP 6 ? A ASP 221 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 O ? A ILE 10 ? A ILE 225 ? 1_555 150.8 ? 6 OD1 ? A ASP 8 ? A ASP 223 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 O ? A ILE 10 ? A ILE 225 ? 1_555 105.9 ? 7 OD1 ? A ASP 4 ? A ASP 219 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 OE1 ? A GLU 15 ? A GLU 230 ? 1_555 160.3 ? 8 OD1 ? A ASP 6 ? A ASP 221 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 OE1 ? A GLU 15 ? A GLU 230 ? 1_555 119.9 ? 9 OD1 ? A ASP 8 ? A ASP 223 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 OE1 ? A GLU 15 ? A GLU 230 ? 1_555 105.5 ? 10 O ? A ILE 10 ? A ILE 225 ? 1_555 CA ? C CA . ? A CA 802 ? 1_555 OE1 ? A GLU 15 ? A GLU 230 ? 1_555 88.1 ? 11 OD2 ? A ASP 6 ? A ASP 221 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 OD2 ? A ASP 8 ? A ASP 223 ? 1_555 79.0 ? 12 OD2 ? A ASP 6 ? A ASP 221 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 OE2 ? A GLU 15 ? A GLU 230 ? 1_555 110.6 ? 13 OD2 ? A ASP 8 ? A ASP 223 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 OE2 ? A GLU 15 ? A GLU 230 ? 1_555 82.3 ? 14 OD2 ? A ASP 6 ? A ASP 221 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 O ? A SER 44 ? A SER 259 ? 1_555 96.9 ? 15 OD2 ? A ASP 8 ? A ASP 223 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 O ? A SER 44 ? A SER 259 ? 1_555 154.8 ? 16 OE2 ? A GLU 15 ? A GLU 230 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 O ? A SER 44 ? A SER 259 ? 1_555 75.8 ? 17 OD2 ? A ASP 6 ? A ASP 221 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 O ? A GLU 47 ? A GLU 262 ? 1_555 76.5 ? 18 OD2 ? A ASP 8 ? A ASP 223 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 O ? A GLU 47 ? A GLU 262 ? 1_555 121.2 ? 19 OE2 ? A GLU 15 ? A GLU 230 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 O ? A GLU 47 ? A GLU 262 ? 1_555 156.4 ? 20 O ? A SER 44 ? A SER 259 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 O ? A GLU 47 ? A GLU 262 ? 1_555 81.1 ? 21 OD2 ? A ASP 6 ? A ASP 221 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 OD2 ? A ASP 57 ? A ASP 272 ? 1_555 159.1 ? 22 OD2 ? A ASP 8 ? A ASP 223 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 OD2 ? A ASP 57 ? A ASP 272 ? 1_555 89.5 ? 23 OE2 ? A GLU 15 ? A GLU 230 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 OD2 ? A ASP 57 ? A ASP 272 ? 1_555 84.8 ? 24 O ? A SER 44 ? A SER 259 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 OD2 ? A ASP 57 ? A ASP 272 ? 1_555 100.8 ? 25 O ? A GLU 47 ? A GLU 262 ? 1_555 CA ? B CA . ? A CA 801 ? 1_555 OD2 ? A ASP 57 ? A ASP 272 ? 1_555 95.2 ? 26 O ? A ASN 405 ? A ASN 620 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD1 ? A ASP 407 ? A ASP 622 ? 1_555 70.3 ? 27 O ? A ASN 405 ? A ASN 620 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD2 ? A ASP 407 ? A ASP 622 ? 1_555 81.6 ? 28 OD1 ? A ASP 407 ? A ASP 622 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD2 ? A ASP 407 ? A ASP 622 ? 1_555 45.6 ? 29 O ? A ASN 405 ? A ASN 620 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 O ? A VAL 430 ? A VAL 645 ? 1_555 101.3 ? 30 OD1 ? A ASP 407 ? A ASP 622 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 O ? A VAL 430 ? A VAL 645 ? 1_555 71.3 ? 31 OD2 ? A ASP 407 ? A ASP 622 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 O ? A VAL 430 ? A VAL 645 ? 1_555 112.0 ? 32 O ? A ASN 405 ? A ASN 620 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD1 ? A ASP 518 ? A ASP 733 ? 1_555 74.3 ? 33 OD1 ? A ASP 407 ? A ASP 622 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD1 ? A ASP 518 ? A ASP 733 ? 1_555 130.5 ? 34 OD2 ? A ASP 407 ? A ASP 622 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD1 ? A ASP 518 ? A ASP 733 ? 1_555 153.8 ? 35 O ? A VAL 430 ? A VAL 645 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD1 ? A ASP 518 ? A ASP 733 ? 1_555 83.1 ? 36 O ? A ASN 405 ? A ASN 620 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD2 ? A ASP 518 ? A ASP 733 ? 1_555 126.1 ? 37 OD1 ? A ASP 407 ? A ASP 622 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD2 ? A ASP 518 ? A ASP 733 ? 1_555 144.5 ? 38 OD2 ? A ASP 407 ? A ASP 622 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD2 ? A ASP 518 ? A ASP 733 ? 1_555 150.9 ? 39 O ? A VAL 430 ? A VAL 645 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD2 ? A ASP 518 ? A ASP 733 ? 1_555 74.4 ? 40 OD1 ? A ASP 518 ? A ASP 733 ? 1_555 CA ? D CA . ? A CA 803 ? 1_555 OD2 ? A ASP 518 ? A ASP 733 ? 1_555 51.8 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 223 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 438 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 224 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 439 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 8 ? AA3 ? 8 ? AA4 ? 5 ? AA5 ? 2 ? AA6 ? 3 ? AA7 ? 3 ? AA8 ? 4 ? AA9 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel AA3 7 8 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 19 ? LYS A 22 ? TYR A 234 LYS A 237 AA1 2 ILE A 25 ? LYS A 28 ? ILE A 240 LYS A 243 AA2 1 THR A 202 ? LYS A 207 ? THR A 417 LYS A 422 AA2 2 MET A 187 ? VAL A 197 ? MET A 402 VAL A 412 AA2 3 LYS A 261 ? ASN A 270 ? LYS A 476 ASN A 485 AA2 4 ASP A 146 ? VAL A 151 ? ASP A 361 VAL A 366 AA2 5 ARG A 109 ? SER A 114 ? ARG A 324 SER A 329 AA2 6 VAL A 84 ? ILE A 92 ? VAL A 299 ILE A 307 AA2 7 ASN A 174 ? ASN A 181 ? ASN A 389 ASN A 396 AA2 8 THR A 222 ? TYR A 223 ? THR A 437 TYR A 438 AA3 1 GLY A 214 ? LEU A 217 ? GLY A 429 LEU A 432 AA3 2 MET A 187 ? VAL A 197 ? MET A 402 VAL A 412 AA3 3 LYS A 261 ? ASN A 270 ? LYS A 476 ASN A 485 AA3 4 ASP A 146 ? VAL A 151 ? ASP A 361 VAL A 366 AA3 5 ARG A 109 ? SER A 114 ? ARG A 324 SER A 329 AA3 6 VAL A 84 ? ILE A 92 ? VAL A 299 ILE A 307 AA3 7 ASN A 174 ? ASN A 181 ? ASN A 389 ASN A 396 AA3 8 LEU A 231 ? ALA A 232 ? LEU A 446 ALA A 447 AA4 1 ASN A 136 ? ILE A 137 ? ASN A 351 ILE A 352 AA4 2 GLU A 361 ? PHE A 364 ? GLU A 576 PHE A 579 AA4 3 ASN A 394 ? LYS A 398 ? ASN A 609 LYS A 613 AA4 4 SER A 298 ? ASP A 304 ? SER A 513 ASP A 519 AA4 5 THR A 309 ? ALA A 315 ? THR A 524 ALA A 530 AA5 1 THR A 273 ? LYS A 274 ? THR A 488 LYS A 489 AA5 2 ILE A 280 ? ILE A 281 ? ILE A 495 ILE A 496 AA6 1 THR A 342 ? ASN A 344 ? THR A 557 ASN A 559 AA6 2 LEU A 347 ? PHE A 350 ? LEU A 562 PHE A 565 AA6 3 ILE A 353 ? PRO A 354 ? ILE A 568 PRO A 569 AA7 1 TYR A 402 ? THR A 404 ? TYR A 617 THR A 619 AA7 2 ILE A 515 ? GLU A 524 ? ILE A 730 GLU A 739 AA7 3 ASN A 432 ? LEU A 434 ? ASN A 647 LEU A 649 AA8 1 TYR A 402 ? THR A 404 ? TYR A 617 THR A 619 AA8 2 ILE A 515 ? GLU A 524 ? ILE A 730 GLU A 739 AA8 3 ARG A 452 ? LYS A 460 ? ARG A 667 LYS A 675 AA8 4 THR A 489 ? GLU A 496 ? THR A 704 GLU A 711 AA9 1 GLU A 437 ? ILE A 442 ? GLU A 652 ILE A 657 AA9 2 ILE A 505 ? SER A 511 ? ILE A 720 SER A 726 AA9 3 ILE A 468 ? LYS A 473 ? ILE A 683 LYS A 688 AA9 4 GLN A 477 ? LEU A 482 ? GLN A 692 LEU A 697 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 22 ? N LYS A 237 O ILE A 25 ? O ILE A 240 AA2 1 2 O ILE A 206 ? O ILE A 421 N THR A 194 ? N THR A 409 AA2 2 3 N VAL A 197 ? N VAL A 412 O LYS A 261 ? O LYS A 476 AA2 3 4 O LEU A 262 ? O LEU A 477 N ASN A 147 ? N ASN A 362 AA2 4 5 O ALA A 150 ? O ALA A 365 N THR A 112 ? N THR A 327 AA2 5 6 O ARG A 109 ? O ARG A 324 N LEU A 91 ? N LEU A 306 AA2 6 7 N ILE A 92 ? N ILE A 307 O ASN A 174 ? O ASN A 389 AA2 7 8 N TYR A 179 ? N TYR A 394 O TYR A 223 ? O TYR A 438 AA3 1 2 O GLY A 214 ? O GLY A 429 N VAL A 190 ? N VAL A 405 AA3 2 3 N VAL A 197 ? N VAL A 412 O LYS A 261 ? O LYS A 476 AA3 3 4 O LEU A 262 ? O LEU A 477 N ASN A 147 ? N ASN A 362 AA3 4 5 O ALA A 150 ? O ALA A 365 N THR A 112 ? N THR A 327 AA3 5 6 O ARG A 109 ? O ARG A 324 N LEU A 91 ? N LEU A 306 AA3 6 7 N ILE A 92 ? N ILE A 307 O ASN A 174 ? O ASN A 389 AA3 7 8 N VAL A 177 ? N VAL A 392 O LEU A 231 ? O LEU A 446 AA4 1 2 N ASN A 136 ? N ASN A 351 O PHE A 364 ? O PHE A 579 AA4 2 3 N ILE A 363 ? N ILE A 578 O LEU A 396 ? O LEU A 611 AA4 3 4 O ILE A 397 ? O ILE A 612 N ASP A 304 ? N ASP A 519 AA4 4 5 N ILE A 301 ? N ILE A 516 O ARG A 312 ? O ARG A 527 AA5 1 2 N THR A 273 ? N THR A 488 O ILE A 281 ? O ILE A 496 AA6 1 2 N THR A 342 ? N THR A 557 O TYR A 349 ? O TYR A 564 AA6 2 3 N PHE A 350 ? N PHE A 565 O ILE A 353 ? O ILE A 568 AA7 1 2 N THR A 404 ? N THR A 619 O LEU A 520 ? O LEU A 735 AA7 2 3 O ILE A 515 ? O ILE A 730 N LEU A 434 ? N LEU A 649 AA8 1 2 N THR A 404 ? N THR A 619 O LEU A 520 ? O LEU A 735 AA8 2 3 O PHE A 516 ? O PHE A 731 N LYS A 460 ? N LYS A 675 AA8 3 4 N PHE A 455 ? N PHE A 670 O TYR A 493 ? O TYR A 708 AA9 1 2 N THR A 438 ? N THR A 653 O LEU A 509 ? O LEU A 724 AA9 2 3 O THR A 510 ? O THR A 725 N THR A 469 ? N THR A 684 AA9 3 4 N ILE A 468 ? N ILE A 683 O LEU A 482 ? O LEU A 697 # _pdbx_entry_details.entry_id 9JSF _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 382 ? ? -141.10 31.91 2 1 ALA A 386 ? ? 60.60 -130.56 3 1 TYR A 387 ? ? 61.09 61.62 4 1 LEU A 413 ? ? -94.34 -62.24 5 1 GLN A 427 ? ? -98.89 31.91 6 1 SER A 689 ? ? -149.44 -159.67 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9JSF _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ABCDEFG _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name AlphaFold _em_3d_fitting_list.type 'in silico model' _em_3d_fitting_list.accession_code Q46221 _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 9JSF _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.04 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 10511 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type 'ORGANELLE OR CELLULAR COMPONENT' _em_entity_assembly.name 'Clostridium perfringens iota toxin component Ib' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9JSF _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 0.01 _em_imaging.nominal_defocus_min 600 _em_imaging.nominal_defocus_max 1600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9JSF _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277.15 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9JSF _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9JSF _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C7 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 309 ? A SER 94 2 1 Y 1 A THR 310 ? A THR 95 3 1 Y 1 A ASN 311 ? A ASN 96 4 1 Y 1 A GLU 312 ? A GLU 97 5 1 Y 1 A HIS 313 ? A HIS 98 6 1 Y 1 A ALA 314 ? A ALA 99 7 1 Y 1 A SER 315 ? A SER 100 8 1 Y 1 A SER 316 ? A SER 101 9 1 Y 1 A ASP 317 ? A ASP 102 10 1 Y 1 A GLN 318 ? A GLN 103 11 1 Y 1 A GLY 319 ? A GLY 104 12 1 Y 1 A LYS 320 ? A LYS 105 13 1 Y 1 A THR 321 ? A THR 106 14 1 Y 1 A VAL 322 ? A VAL 107 15 1 Y 1 A THR 450 ? A THR 235 16 1 Y 1 A MET 451 ? A MET 236 17 1 Y 1 A ASP 452 ? A ASP 237 18 1 Y 1 A GLN 453 ? A GLN 238 19 1 Y 1 A PHE 454 ? A PHE 239 20 1 Y 1 A ASN 455 ? A ASN 240 21 1 Y 1 A ALA 456 ? A ALA 241 22 1 Y 1 A ARG 457 ? A ARG 242 23 1 Y 1 A LEU 458 ? A LEU 243 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 ILE N N N N 159 ILE CA C N S 160 ILE C C N N 161 ILE O O N N 162 ILE CB C N S 163 ILE CG1 C N N 164 ILE CG2 C N N 165 ILE CD1 C N N 166 ILE OXT O N N 167 ILE H H N N 168 ILE H2 H N N 169 ILE HA H N N 170 ILE HB H N N 171 ILE HG12 H N N 172 ILE HG13 H N N 173 ILE HG21 H N N 174 ILE HG22 H N N 175 ILE HG23 H N N 176 ILE HD11 H N N 177 ILE HD12 H N N 178 ILE HD13 H N N 179 ILE HXT H N N 180 LEU N N N N 181 LEU CA C N S 182 LEU C C N N 183 LEU O O N N 184 LEU CB C N N 185 LEU CG C N N 186 LEU CD1 C N N 187 LEU CD2 C N N 188 LEU OXT O N N 189 LEU H H N N 190 LEU H2 H N N 191 LEU HA H N N 192 LEU HB2 H N N 193 LEU HB3 H N N 194 LEU HG H N N 195 LEU HD11 H N N 196 LEU HD12 H N N 197 LEU HD13 H N N 198 LEU HD21 H N N 199 LEU HD22 H N N 200 LEU HD23 H N N 201 LEU HXT H N N 202 LYS N N N N 203 LYS CA C N S 204 LYS C C N N 205 LYS O O N N 206 LYS CB C N N 207 LYS CG C N N 208 LYS CD C N N 209 LYS CE C N N 210 LYS NZ N N N 211 LYS OXT O N N 212 LYS H H N N 213 LYS H2 H N N 214 LYS HA H N N 215 LYS HB2 H N N 216 LYS HB3 H N N 217 LYS HG2 H N N 218 LYS HG3 H N N 219 LYS HD2 H N N 220 LYS HD3 H N N 221 LYS HE2 H N N 222 LYS HE3 H N N 223 LYS HZ1 H N N 224 LYS HZ2 H N N 225 LYS HZ3 H N N 226 LYS HXT H N N 227 MET N N N N 228 MET CA C N S 229 MET C C N N 230 MET O O N N 231 MET CB C N N 232 MET CG C N N 233 MET SD S N N 234 MET CE C N N 235 MET OXT O N N 236 MET H H N N 237 MET H2 H N N 238 MET HA H N N 239 MET HB2 H N N 240 MET HB3 H N N 241 MET HG2 H N N 242 MET HG3 H N N 243 MET HE1 H N N 244 MET HE2 H N N 245 MET HE3 H N N 246 MET HXT H N N 247 PHE N N N N 248 PHE CA C N S 249 PHE C C N N 250 PHE O O N N 251 PHE CB C N N 252 PHE CG C Y N 253 PHE CD1 C Y N 254 PHE CD2 C Y N 255 PHE CE1 C Y N 256 PHE CE2 C Y N 257 PHE CZ C Y N 258 PHE OXT O N N 259 PHE H H N N 260 PHE H2 H N N 261 PHE HA H N N 262 PHE HB2 H N N 263 PHE HB3 H N N 264 PHE HD1 H N N 265 PHE HD2 H N N 266 PHE HE1 H N N 267 PHE HE2 H N N 268 PHE HZ H N N 269 PHE HXT H N N 270 PRO N N N N 271 PRO CA C N S 272 PRO C C N N 273 PRO O O N N 274 PRO CB C N N 275 PRO CG C N N 276 PRO CD C N N 277 PRO OXT O N N 278 PRO H H N N 279 PRO HA H N N 280 PRO HB2 H N N 281 PRO HB3 H N N 282 PRO HG2 H N N 283 PRO HG3 H N N 284 PRO HD2 H N N 285 PRO HD3 H N N 286 PRO HXT H N N 287 SER N N N N 288 SER CA C N S 289 SER C C N N 290 SER O O N N 291 SER CB C N N 292 SER OG O N N 293 SER OXT O N N 294 SER H H N N 295 SER H2 H N N 296 SER HA H N N 297 SER HB2 H N N 298 SER HB3 H N N 299 SER HG H N N 300 SER HXT H N N 301 THR N N N N 302 THR CA C N S 303 THR C C N N 304 THR O O N N 305 THR CB C N R 306 THR OG1 O N N 307 THR CG2 C N N 308 THR OXT O N N 309 THR H H N N 310 THR H2 H N N 311 THR HA H N N 312 THR HB H N N 313 THR HG1 H N N 314 THR HG21 H N N 315 THR HG22 H N N 316 THR HG23 H N N 317 THR HXT H N N 318 TRP N N N N 319 TRP CA C N S 320 TRP C C N N 321 TRP O O N N 322 TRP CB C N N 323 TRP CG C Y N 324 TRP CD1 C Y N 325 TRP CD2 C Y N 326 TRP NE1 N Y N 327 TRP CE2 C Y N 328 TRP CE3 C Y N 329 TRP CZ2 C Y N 330 TRP CZ3 C Y N 331 TRP CH2 C Y N 332 TRP OXT O N N 333 TRP H H N N 334 TRP H2 H N N 335 TRP HA H N N 336 TRP HB2 H N N 337 TRP HB3 H N N 338 TRP HD1 H N N 339 TRP HE1 H N N 340 TRP HE3 H N N 341 TRP HZ2 H N N 342 TRP HZ3 H N N 343 TRP HH2 H N N 344 TRP HXT H N N 345 TYR N N N N 346 TYR CA C N S 347 TYR C C N N 348 TYR O O N N 349 TYR CB C N N 350 TYR CG C Y N 351 TYR CD1 C Y N 352 TYR CD2 C Y N 353 TYR CE1 C Y N 354 TYR CE2 C Y N 355 TYR CZ C Y N 356 TYR OH O N N 357 TYR OXT O N N 358 TYR H H N N 359 TYR H2 H N N 360 TYR HA H N N 361 TYR HB2 H N N 362 TYR HB3 H N N 363 TYR HD1 H N N 364 TYR HD2 H N N 365 TYR HE1 H N N 366 TYR HE2 H N N 367 TYR HH H N N 368 TYR HXT H N N 369 VAL N N N N 370 VAL CA C N S 371 VAL C C N N 372 VAL O O N N 373 VAL CB C N N 374 VAL CG1 C N N 375 VAL CG2 C N N 376 VAL OXT O N N 377 VAL H H N N 378 VAL H2 H N N 379 VAL HA H N N 380 VAL HB H N N 381 VAL HG11 H N N 382 VAL HG12 H N N 383 VAL HG13 H N N 384 VAL HG21 H N N 385 VAL HG22 H N N 386 VAL HG23 H N N 387 VAL HXT H N N 388 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2024-09-30 _em_admin.deposition_site PDBJ _em_admin.entry_id 9JSF _em_admin.last_update 2025-05-14 _em_admin.map_release_date 2025-05-14 _em_admin.title 'Clostridium perfringens iota toxin pore Ib in prepore I state' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 20 mM C4H11NO3 1 'tris hydroxymethyl aminomethane' 1 100 mM NaCl 2 'Sodium Chloride' 1 1.0 mM CaCl2 3 'Calcium Chloride' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 1502 _em_entity_assembly_naturalsource.organism 'Clostridium perfringens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain 'NCIB 10748' _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid pet23a _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50.0 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 11549 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 6223563 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' 'template picker' 1 1 ? ? cryoSPARC 3.3.2 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' 'patch CTF estimation' 4 1 ? ? cryoSPARC 3.3.2 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? 'UCSF ChimeraX' 1.2.4 OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX 1.19.2 'MODEL REFINEMENT' ? 10 ? 1 ? Coot 0.9.5 'INITIAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 12 1 ? ? cryoSPARC 3.3.2 CLASSIFICATION ? 13 1 ? ? cryoSPARC 3.3.2 RECONSTRUCTION ? 14 1 ? ? cryoSPARC 3.3.2 'VOLUME SELECTION' ? 15 1 1 1 ? ? 'SERIES ALIGNMENT' ? 16 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 17 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 18 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 19 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 20 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 21J13410 1 'Japan Society for the Promotion of Science (JSPS)' Japan 21H02452 2 'Japan Society for the Promotion of Science (JSPS)' Japan 24K01993 3 'Japan Agency for Medical Research and Development (AMED)' Japan 2366 4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code Q46221 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9JSF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CA N O S # loop_ #