data_9JX5 # _entry.id 9JX5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9JX5 pdb_00009jx5 10.2210/pdb9jx5/pdb WWPDB D_1300052496 ? ? BMRB 36698 ? 10.13018/BMR36698 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-02-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 9JX5 _pdbx_database_status.recvd_initial_deposition_date 2024-10-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR structure of the 1:1 complex of NOP56 intronic G-quadruplex bound with pyridostatin' _pdbx_database_related.db_id 36698 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 3 _pdbx_contact_author.email dahan@sjtu.edu.cn _pdbx_contact_author.name_first Da _pdbx_contact_author.name_last Han _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0804-2964 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yan, Z.' 1 0009-0006-1206-5495 'Wan, L.' 2 0000-0003-3663-2678 'Guo, P.' 3 0000-0001-7760-5786 'Han, D.' 4 0000-0002-0804-2964 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural Insights into an Antiparallel Chair-Type G-Quadruplex from the Intron of NOP56 Oncogene' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yan, Z.' 1 0009-0006-1206-5495 primary 'Wan, L.' 2 0000-0003-3663-2678 primary 'Guo, P.' 3 0000-0001-7760-5786 primary 'Han, D.' 4 0000-0002-0804-2964 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*G)-3') ; 6553.182 1 ? ? ? ? 2 non-polymer syn '4-(2-azanylethoxy)-N2,N6-bis[4-(2-azanylethoxy)quinolin-2-yl]pyridine-2,6-dicarboxamide' 596.636 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DG)(DG)(DG)(DC)(DC)(DT)(DG)(DG)(DG)(DC)(DC)(DT)(DG)(DG)(DG)(DC)(DC)(DT)(DG)(DG) (DG) ; _entity_poly.pdbx_seq_one_letter_code_can GGGCCTGGGCCTGGGCCTGGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '4-(2-azanylethoxy)-N2,N6-bis[4-(2-azanylethoxy)quinolin-2-yl]pyridine-2,6-dicarboxamide' _pdbx_entity_nonpoly.comp_id 7V8 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DC n 1 5 DC n 1 6 DT n 1 7 DG n 1 8 DG n 1 9 DG n 1 10 DC n 1 11 DC n 1 12 DT n 1 13 DG n 1 14 DG n 1 15 DG n 1 16 DC n 1 17 DC n 1 18 DT n 1 19 DG n 1 20 DG n 1 21 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 21 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 7V8 non-polymer . '4-(2-azanylethoxy)-N2,N6-bis[4-(2-azanylethoxy)quinolin-2-yl]pyridine-2,6-dicarboxamide' Pyridostatin 'C31 H32 N8 O5' 596.636 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DC 10 10 10 DC DC A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DT 12 12 12 DT DT A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DC 16 16 16 DC DC A . n A 1 17 DC 17 17 17 DC DC A . n A 1 18 DT 18 18 18 DT DT A . n A 1 19 DG 19 19 19 DG DG A . n A 1 20 DG 20 20 20 DG DG A . n A 1 21 DG 21 21 21 DG DG A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 7V8 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 7V8 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 7V8 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 101 _pdbx_nonpoly_scheme.pdb_mon_id 7V8 _pdbx_nonpoly_scheme.auth_mon_id 7V8 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9JX5 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 9JX5 _struct.title 'Solution NMR structure of the 1:1 complex of NOP56 intronic G-quadruplex bound with pyridostatin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9JX5 _struct_keywords.text 'antiparallel G4, NOP56 oncogene, PDS, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9JX5 _struct_ref.pdbx_db_accession 9JX5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9JX5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 21 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9JX5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 21 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 9 N2 ? ? A DG 2 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 9 N1 ? ? A DG 2 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 21 O6 ? ? A DG 2 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 21 N7 ? ? A DG 2 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 3 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 3 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 20 N2 ? ? A DG 3 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 20 N1 ? ? A DG 3 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 A DG 7 N1 ? ? A DC 4 A DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 7 O6 ? ? A DC 4 A DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 O2 ? ? ? 1_555 A DG 7 N2 ? ? A DC 4 A DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 19 O6 ? ? A DC 4 A DG 19 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog13 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DC 16 N4 ? ? A DG 7 A DC 16 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog14 hydrog ? ? A DG 7 N7 ? ? ? 1_555 A DC 17 N4 ? ? A DG 7 A DC 17 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog15 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 8 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 8 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 9 N7 ? ? ? 1_555 A DG 14 N2 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DG 14 N1 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 14 N7 ? ? ? 1_555 A DG 21 N2 ? ? A DG 14 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 14 O6 ? ? ? 1_555 A DG 21 N1 ? ? A DG 14 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 20 O6 ? ? A DG 15 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 20 N7 ? ? A DG 15 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DC 16 N3 ? ? ? 1_555 A DG 19 N1 ? ? A DC 16 A DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 16 N4 ? ? ? 1_555 A DG 19 O6 ? ? A DC 16 A DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 16 O2 ? ? ? 1_555 A DG 19 N2 ? ? A DC 16 A DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 17 O2 ? ? ? 1_555 A DG 19 N1 ? ? A DC 17 A DG 19 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9JX5 _pdbx_entry_details.nonpolymer_details ;N36+H33+H34+H35, N40+H30+H31+H32 and N52+H95+H96+H97 are three protonated (positive charged) amino groups. Therefore the valence of N36, N40 and N52 is four. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.12 108.30 2.82 0.30 N 2 1 N3 A DG 2 ? ? C4 A DG 2 ? ? C5 A DG 2 ? ? 125.47 128.60 -3.13 0.50 N 3 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 115.26 108.30 6.96 0.30 N 4 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 113.58 108.30 5.28 0.30 N 5 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 112.11 108.30 3.81 0.30 N 6 1 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.25 108.30 2.95 0.30 N 7 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.05 108.30 2.75 0.30 N 8 1 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DG 8 ? ? 128.07 119.70 8.37 1.20 Y 9 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.98 108.30 4.68 0.30 N 10 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.28 108.30 3.98 0.30 N 11 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 111.78 108.30 3.48 0.30 N 12 1 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 100.58 105.90 -5.32 0.80 N 13 1 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 115.62 108.30 7.32 0.30 N 14 1 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 113.65 108.30 5.35 0.30 N 15 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 99.94 105.90 -5.96 0.80 N 16 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 115.23 108.30 6.93 0.30 N 17 1 N3 A DG 14 ? ? C4 A DG 14 ? ? C5 A DG 14 ? ? 125.07 128.60 -3.53 0.50 N 18 1 N3 A DG 14 ? ? C4 A DG 14 ? ? N9 A DG 14 ? ? 129.90 126.00 3.90 0.60 N 19 1 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.33 108.30 4.03 0.30 N 20 1 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 116.40 108.30 8.10 0.30 N 21 1 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 112.79 108.30 4.49 0.30 N 22 1 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.26 108.30 3.96 0.30 N 23 1 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 127.77 119.70 8.07 1.20 Y 24 1 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.98 108.30 3.68 0.30 N 25 1 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 113.75 108.30 5.45 0.30 N 26 2 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? "C2'" A DG 1 ? ? 100.64 105.90 -5.26 0.80 N 27 2 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.96 108.30 2.66 0.30 N 28 2 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 114.02 108.30 5.72 0.30 N 29 2 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.64 108.30 4.34 0.30 N 30 2 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 113.25 108.30 4.95 0.30 N 31 2 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.43 108.30 3.13 0.30 N 32 2 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DG 8 ? ? 129.23 119.70 9.53 1.20 Y 33 2 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.68 108.30 3.38 0.30 N 34 2 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.21 108.30 3.91 0.30 N 35 2 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.20 108.30 3.90 0.30 N 36 2 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DT 12 ? ? 127.61 119.70 7.91 1.20 Y 37 2 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.17 108.30 1.87 0.30 N 38 2 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 112.93 108.30 4.63 0.30 N 39 2 "C1'" A DG 14 ? ? "O4'" A DG 14 ? ? "C4'" A DG 14 ? ? 104.04 110.10 -6.06 1.00 N 40 2 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.25 105.90 -5.65 0.80 N 41 2 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 114.73 108.30 6.43 0.30 N 42 2 N3 A DG 14 ? ? C4 A DG 14 ? ? C5 A DG 14 ? ? 125.43 128.60 -3.17 0.50 N 43 2 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.21 108.30 3.91 0.30 N 44 2 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 114.05 108.30 5.75 0.30 N 45 2 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 113.23 108.30 4.93 0.30 N 46 2 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.45 108.30 3.15 0.30 N 47 2 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 110.98 108.30 2.68 0.30 N 48 2 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 127.29 119.70 7.59 1.20 Y 49 2 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.28 108.30 2.98 0.30 N 50 2 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 113.59 108.30 5.29 0.30 N 51 3 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.41 108.30 3.11 0.30 N 52 3 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 115.22 108.30 6.92 0.30 N 53 3 "C4'" A DC 4 ? ? "C3'" A DC 4 ? ? "C2'" A DC 4 ? ? 97.85 102.20 -4.35 0.70 N 54 3 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 114.26 108.30 5.96 0.30 N 55 3 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 116.88 108.30 8.58 0.30 N 56 3 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 114.49 108.30 6.19 0.30 N 57 3 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.00 108.30 3.70 0.30 N 58 3 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.34 108.30 4.04 0.30 N 59 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.88 108.30 3.58 0.30 N 60 3 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 99.69 105.90 -6.21 0.80 N 61 3 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.99 108.30 4.69 0.30 N 62 3 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DT 12 ? ? 126.97 119.70 7.27 1.20 Y 63 3 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.96 108.30 2.66 0.30 N 64 3 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 113.71 108.30 5.41 0.30 N 65 3 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.71 105.90 -5.19 0.80 N 66 3 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 116.28 108.30 7.98 0.30 N 67 3 N3 A DG 14 ? ? C4 A DG 14 ? ? C5 A DG 14 ? ? 125.42 128.60 -3.18 0.50 N 68 3 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.63 108.30 4.33 0.30 N 69 3 "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? "C1'" A DC 16 ? ? 97.39 102.40 -5.01 0.80 N 70 3 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 115.66 108.30 7.36 0.30 N 71 3 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 112.09 108.30 3.79 0.30 N 72 3 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.63 108.30 2.33 0.30 N 73 3 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 110.87 108.30 2.57 0.30 N 74 3 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 129.21 119.70 9.51 1.20 Y 75 3 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.49 108.30 3.19 0.30 N 76 3 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 114.28 108.30 5.98 0.30 N 77 4 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? "C2'" A DG 1 ? ? 100.56 105.90 -5.34 0.80 N 78 4 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.99 108.30 3.69 0.30 N 79 4 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DG 3 ? ? 128.21 119.70 8.51 1.20 Y 80 4 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 117.04 108.30 8.74 0.30 N 81 4 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 114.07 108.30 5.77 0.30 N 82 4 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.09 108.30 2.79 0.30 N 83 4 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 112.48 108.30 4.18 0.30 N 84 4 "C1'" A DG 7 ? ? "O4'" A DG 7 ? ? "C4'" A DG 7 ? ? 103.94 110.10 -6.16 1.00 N 85 4 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 113.06 108.30 4.76 0.30 N 86 4 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DG 8 ? ? 128.07 119.70 8.37 1.20 Y 87 4 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 114.87 108.30 6.57 0.30 N 88 4 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.58 108.30 4.28 0.30 N 89 4 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 99.14 105.90 -6.76 0.80 N 90 4 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 114.92 108.30 6.62 0.30 N 91 4 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.58 118.90 3.68 0.60 N 92 4 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DT 12 ? ? 127.04 119.70 7.34 1.20 Y 93 4 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 113.72 108.30 5.42 0.30 N 94 4 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.08 105.90 -5.82 0.80 N 95 4 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 114.74 108.30 6.44 0.30 N 96 4 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.49 108.30 3.19 0.30 N 97 4 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 113.93 108.30 5.63 0.30 N 98 4 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 115.34 108.30 7.04 0.30 N 99 4 N1 A DC 17 ? ? C2 A DC 17 ? ? O2 A DC 17 ? ? 122.58 118.90 3.68 0.60 N 100 4 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.63 108.30 4.33 0.30 N 101 4 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 128.07 119.70 8.37 1.20 Y 102 4 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.93 108.30 2.63 0.30 N 103 4 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 114.01 108.30 5.71 0.30 N 104 5 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? "C2'" A DG 1 ? ? 101.00 105.90 -4.90 0.80 N 105 5 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.16 108.30 3.86 0.30 N 106 5 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 115.29 108.30 6.99 0.30 N 107 5 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.75 108.30 3.45 0.30 N 108 5 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 113.74 108.30 5.44 0.30 N 109 5 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 122.81 118.90 3.91 0.60 N 110 5 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 117.11 121.90 -4.79 0.70 N 111 5 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.14 108.30 1.84 0.30 N 112 5 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 119.24 122.90 -3.66 0.60 N 113 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.12 108.30 3.82 0.30 N 114 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.80 108.30 4.50 0.30 N 115 5 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.02 108.30 4.72 0.30 N 116 5 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 117.66 121.90 -4.24 0.70 N 117 5 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DT 12 ? ? 127.09 119.70 7.39 1.20 Y 118 5 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.22 108.30 2.92 0.30 N 119 5 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 114.05 108.30 5.75 0.30 N 120 5 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.17 105.90 -5.73 0.80 N 121 5 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 114.83 108.30 6.53 0.30 N 122 5 N3 A DG 14 ? ? C4 A DG 14 ? ? C5 A DG 14 ? ? 125.53 128.60 -3.07 0.50 N 123 5 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.77 108.30 4.47 0.30 N 124 5 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 114.41 108.30 6.11 0.30 N 125 5 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 112.52 108.30 4.22 0.30 N 126 5 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.20 108.30 2.90 0.30 N 127 5 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 127.68 119.70 7.98 1.20 Y 128 5 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.51 108.30 3.21 0.30 N 129 5 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 114.34 108.30 6.04 0.30 N 130 6 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? "C2'" A DG 1 ? ? 100.17 105.90 -5.73 0.80 N 131 6 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.75 108.30 3.45 0.30 N 132 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 114.84 108.30 6.54 0.30 N 133 6 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.27 108.30 3.97 0.30 N 134 6 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 113.40 108.30 5.10 0.30 N 135 6 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.77 108.30 3.47 0.30 N 136 6 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DG 8 ? ? 129.12 119.70 9.42 1.20 Y 137 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.73 108.30 4.43 0.30 N 138 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.20 108.30 4.90 0.30 N 139 6 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.31 108.30 2.01 0.30 N 140 6 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 114.25 108.30 5.95 0.30 N 141 6 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DT 12 ? ? 127.56 119.70 7.86 1.20 Y 142 6 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 113.08 108.30 4.78 0.30 N 143 6 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.10 105.90 -5.80 0.80 N 144 6 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 114.57 108.30 6.27 0.30 N 145 6 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.53 108.30 4.23 0.30 N 146 6 "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? "C1'" A DC 16 ? ? 97.30 102.40 -5.10 0.80 N 147 6 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 113.61 108.30 5.31 0.30 N 148 6 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 112.80 108.30 4.50 0.30 N 149 6 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.30 108.30 3.00 0.30 N 150 6 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 111.60 108.30 3.30 0.30 N 151 6 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 128.07 119.70 8.37 1.20 Y 152 6 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.90 108.30 3.60 0.30 N 153 6 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 113.31 108.30 5.01 0.30 N 154 7 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.91 108.30 3.61 0.30 N 155 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 115.29 108.30 6.99 0.30 N 156 7 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 113.44 108.30 5.14 0.30 N 157 7 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.60 108.30 3.30 0.30 N 158 7 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 113.87 108.30 5.57 0.30 N 159 7 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.72 108.30 3.42 0.30 N 160 7 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DG 8 ? ? 129.55 119.70 9.85 1.20 Y 161 7 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 113.46 108.30 5.16 0.30 N 162 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.35 108.30 4.05 0.30 N 163 7 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.89 108.30 4.59 0.30 N 164 7 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DT 12 ? ? 127.49 119.70 7.79 1.20 Y 165 7 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.12 108.30 1.82 0.30 N 166 7 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 112.70 108.30 4.40 0.30 N 167 7 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.67 105.90 -5.23 0.80 N 168 7 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 114.67 108.30 6.37 0.30 N 169 7 N3 A DG 14 ? ? C4 A DG 14 ? ? C5 A DG 14 ? ? 125.57 128.60 -3.03 0.50 N 170 7 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.89 108.30 3.59 0.30 N 171 7 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 113.63 108.30 5.33 0.30 N 172 7 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 113.63 108.30 5.33 0.30 N 173 7 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.53 108.30 3.23 0.30 N 174 7 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 111.05 108.30 2.75 0.30 N 175 7 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 127.66 119.70 7.96 1.20 Y 176 7 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.87 108.30 2.57 0.30 N 177 7 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 113.70 108.30 5.40 0.30 N 178 8 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? "C2'" A DG 1 ? ? 101.06 105.90 -4.84 0.80 N 179 8 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.74 108.30 3.44 0.30 N 180 8 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.80 108.30 4.50 0.30 N 181 8 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.41 108.30 4.11 0.30 N 182 8 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 113.15 108.30 4.85 0.30 N 183 8 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.14 108.30 1.84 0.30 N 184 8 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.80 108.30 3.50 0.30 N 185 8 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DG 8 ? ? 129.05 119.70 9.35 1.20 Y 186 8 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 113.19 108.30 4.89 0.30 N 187 8 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.76 108.30 3.46 0.30 N 188 8 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.27 108.30 1.97 0.30 N 189 8 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 99.88 105.90 -6.02 0.80 N 190 8 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.25 108.30 4.95 0.30 N 191 8 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.93 108.30 2.63 0.30 N 192 8 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 112.95 108.30 4.65 0.30 N 193 8 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.61 105.90 -5.29 0.80 N 194 8 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 114.37 108.30 6.07 0.30 N 195 8 N3 A DG 14 ? ? C4 A DG 14 ? ? C5 A DG 14 ? ? 125.58 128.60 -3.02 0.50 N 196 8 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.01 108.30 2.71 0.30 N 197 8 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 113.31 108.30 5.01 0.30 N 198 8 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 112.06 108.30 3.76 0.30 N 199 8 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 113.08 108.30 4.78 0.30 N 200 8 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.69 108.30 4.39 0.30 N 201 8 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 128.15 119.70 8.45 1.20 Y 202 8 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.36 108.30 3.06 0.30 N 203 8 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.94 108.30 4.64 0.30 N 204 9 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.61 108.30 3.31 0.30 N 205 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 100.99 105.90 -4.91 0.80 N 206 9 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.09 108.30 3.79 0.30 N 207 9 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 113.30 108.30 5.00 0.30 N 208 9 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 112.23 108.30 3.93 0.30 N 209 9 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 112.65 108.30 4.35 0.30 N 210 9 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.68 108.30 2.38 0.30 N 211 9 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DG 8 ? ? 129.56 119.70 9.86 1.20 Y 212 9 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.89 108.30 4.59 0.30 N 213 9 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.78 108.30 4.48 0.30 N 214 9 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.24 108.30 4.94 0.30 N 215 9 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DT 12 ? ? 127.74 119.70 8.04 1.20 Y 216 9 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 114.69 108.30 6.39 0.30 N 217 9 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.30 105.90 -5.60 0.80 N 218 9 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 115.24 108.30 6.94 0.30 N 219 9 N3 A DG 14 ? ? C4 A DG 14 ? ? C5 A DG 14 ? ? 125.53 128.60 -3.07 0.50 N 220 9 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.20 108.30 2.90 0.30 N 221 9 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 114.23 108.30 5.93 0.30 N 222 9 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 112.18 108.30 3.88 0.30 N 223 9 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.87 108.30 2.57 0.30 N 224 9 C6 A DT 18 ? ? C5 A DT 18 ? ? C7 A DT 18 ? ? 119.13 122.90 -3.77 0.60 N 225 9 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 114.72 108.30 6.42 0.30 N 226 9 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 127.57 119.70 7.87 1.20 Y 227 9 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.23 108.30 2.93 0.30 N 228 9 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 113.31 108.30 5.01 0.30 N 229 10 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? "C2'" A DG 1 ? ? 100.20 105.90 -5.70 0.80 N 230 10 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.74 108.30 3.44 0.30 N 231 10 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DG 3 ? ? 128.52 119.70 8.82 1.20 Y 232 10 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 116.89 108.30 8.59 0.30 N 233 10 "C4'" A DC 4 ? ? "C3'" A DC 4 ? ? "C2'" A DC 4 ? ? 96.27 102.20 -5.93 0.70 N 234 10 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 114.10 108.30 5.80 0.30 N 235 10 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 112.28 108.30 3.98 0.30 N 236 10 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.53 108.30 3.23 0.30 N 237 10 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 115.33 108.30 7.03 0.30 N 238 10 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DG 8 ? ? 129.16 119.70 9.46 1.20 Y 239 10 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 113.01 108.30 4.71 0.30 N 240 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.83 108.30 4.53 0.30 N 241 10 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 99.56 105.90 -6.34 0.80 N 242 10 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.74 108.30 5.44 0.30 N 243 10 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DT 12 ? ? 126.95 119.70 7.25 1.20 Y 244 10 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 113.27 108.30 4.97 0.30 N 245 10 "C1'" A DG 14 ? ? "O4'" A DG 14 ? ? "C4'" A DG 14 ? ? 104.06 110.10 -6.04 1.00 N 246 10 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.68 105.90 -5.22 0.80 N 247 10 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 115.93 108.30 7.63 0.30 N 248 10 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.83 108.30 3.53 0.30 N 249 10 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 115.69 108.30 7.39 0.30 N 250 10 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 113.60 108.30 5.30 0.30 N 251 10 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.77 108.30 3.47 0.30 N 252 10 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.08 108.30 3.78 0.30 N 253 10 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 128.46 119.70 8.76 1.20 Y 254 10 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 112.28 108.30 3.98 0.30 N 255 10 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.90 108.30 4.60 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 2 ? ? 0.070 'SIDE CHAIN' 2 1 DG A 3 ? ? 0.091 'SIDE CHAIN' 3 1 DC A 10 ? ? 0.072 'SIDE CHAIN' 4 1 DC A 11 ? ? 0.080 'SIDE CHAIN' 5 1 DT A 12 ? ? 0.071 'SIDE CHAIN' 6 1 DG A 13 ? ? 0.109 'SIDE CHAIN' 7 1 DC A 16 ? ? 0.061 'SIDE CHAIN' 8 1 DC A 17 ? ? 0.116 'SIDE CHAIN' 9 1 DG A 21 ? ? 0.096 'SIDE CHAIN' 10 2 DG A 2 ? ? 0.070 'SIDE CHAIN' 11 2 DG A 3 ? ? 0.076 'SIDE CHAIN' 12 2 DC A 5 ? ? 0.079 'SIDE CHAIN' 13 2 DG A 13 ? ? 0.066 'SIDE CHAIN' 14 2 DG A 15 ? ? 0.064 'SIDE CHAIN' 15 2 DG A 21 ? ? 0.097 'SIDE CHAIN' 16 3 DG A 2 ? ? 0.070 'SIDE CHAIN' 17 3 DG A 3 ? ? 0.088 'SIDE CHAIN' 18 3 DG A 13 ? ? 0.080 'SIDE CHAIN' 19 3 DC A 16 ? ? 0.069 'SIDE CHAIN' 20 3 DC A 17 ? ? 0.068 'SIDE CHAIN' 21 3 DG A 21 ? ? 0.137 'SIDE CHAIN' 22 4 DG A 1 ? ? 0.067 'SIDE CHAIN' 23 4 DG A 2 ? ? 0.051 'SIDE CHAIN' 24 4 DG A 3 ? ? 0.075 'SIDE CHAIN' 25 4 DG A 7 ? ? 0.061 'SIDE CHAIN' 26 4 DT A 12 ? ? 0.093 'SIDE CHAIN' 27 4 DG A 13 ? ? 0.093 'SIDE CHAIN' 28 4 DG A 15 ? ? 0.068 'SIDE CHAIN' 29 4 DT A 18 ? ? 0.094 'SIDE CHAIN' 30 4 DG A 21 ? ? 0.137 'SIDE CHAIN' 31 5 DG A 1 ? ? 0.056 'SIDE CHAIN' 32 5 DG A 2 ? ? 0.071 'SIDE CHAIN' 33 5 DG A 3 ? ? 0.081 'SIDE CHAIN' 34 5 DG A 13 ? ? 0.080 'SIDE CHAIN' 35 5 DG A 21 ? ? 0.110 'SIDE CHAIN' 36 6 DG A 1 ? ? 0.056 'SIDE CHAIN' 37 6 DG A 2 ? ? 0.097 'SIDE CHAIN' 38 6 DG A 3 ? ? 0.061 'SIDE CHAIN' 39 6 DC A 5 ? ? 0.089 'SIDE CHAIN' 40 6 DT A 6 ? ? 0.090 'SIDE CHAIN' 41 6 DG A 13 ? ? 0.080 'SIDE CHAIN' 42 6 DG A 21 ? ? 0.085 'SIDE CHAIN' 43 7 DG A 1 ? ? 0.073 'SIDE CHAIN' 44 7 DG A 2 ? ? 0.071 'SIDE CHAIN' 45 7 DG A 3 ? ? 0.077 'SIDE CHAIN' 46 7 DG A 7 ? ? 0.060 'SIDE CHAIN' 47 7 DG A 13 ? ? 0.095 'SIDE CHAIN' 48 7 DG A 21 ? ? 0.124 'SIDE CHAIN' 49 8 DG A 1 ? ? 0.050 'SIDE CHAIN' 50 8 DG A 2 ? ? 0.067 'SIDE CHAIN' 51 8 DC A 5 ? ? 0.072 'SIDE CHAIN' 52 8 DT A 6 ? ? 0.065 'SIDE CHAIN' 53 8 DG A 21 ? ? 0.092 'SIDE CHAIN' 54 9 DG A 2 ? ? 0.073 'SIDE CHAIN' 55 9 DG A 3 ? ? 0.050 'SIDE CHAIN' 56 9 DG A 7 ? ? 0.069 'SIDE CHAIN' 57 9 DG A 13 ? ? 0.083 'SIDE CHAIN' 58 9 DG A 21 ? ? 0.105 'SIDE CHAIN' 59 10 DG A 3 ? ? 0.052 'SIDE CHAIN' 60 10 DG A 13 ? ? 0.094 'SIDE CHAIN' 61 10 DG A 21 ? ? 0.087 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 9JX5 _pdbx_nmr_ensemble.conformers_calculated_total_number 500 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 9JX5 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;0.5 mM DNA (5'-D(*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*G)-3'), 1 mM sodium phosphate, 0.02 mM DSS, 1.5 mM pyridostatin, 99.96% D2O ; '99.96% D2O' 1 solution ? 2 ;0.5 mM DNA (5'-D(*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*G)-3'), 1 mM sodium phosphate, 0.02 mM DSS, 1.5 mM pyridostatin, 90% H2O/10% D2O ; '90% H2O/10% D2O' 2 solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-D(*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*G)-3') ; 0.5 ? mM 'natural abundance' 1 'sodium phosphate' 1 ? mM 'natural abundance' 1 DSS 0.02 ? mM 'natural abundance' 1 pyridostatin 1.5 ? mM 'natural abundance' 2 ;DNA (5'-D(*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*G)-3') ; 0.5 ? mM 'natural abundance' 2 'sodium phosphate' 1 ? mM 'natural abundance' 2 DSS 0.02 ? mM 'natural abundance' 2 pyridostatin 1.5 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 1 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 2 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D 1H-1H TOCSY' 1 isotropic 4 1 1 '2D 1H-1H COSY' 1 isotropic # _pdbx_nmr_refine.entry_id 9JX5 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' TopSpin ? 'Bruker Biospin' 2 'structure calculation' Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 7V8 C6 C Y N 1 7V8 N13 N N N 2 7V8 C2 C Y N 3 7V8 C5 C Y N 4 7V8 C11 C N N 5 7V8 C18 C Y N 6 7V8 C29 C Y N 7 7V8 C31 C Y N 8 7V8 C28 C Y N 9 7V8 C23 C Y N 10 7V8 C26 C Y N 11 7V8 C1 C Y N 12 7V8 C16 C Y N 13 7V8 C7 C N N 14 7V8 C15 C Y N 15 7V8 C21 C Y N 16 7V8 N9 N N N 17 7V8 C4 C Y N 18 7V8 C10 C Y N 19 7V8 C17 C Y N 20 7V8 C22 C Y N 21 7V8 C27 C Y N 22 7V8 C32 C Y N 23 7V8 N36 N N N 24 7V8 C35 C N N 25 7V8 C34 C N N 26 7V8 O33 O N N 27 7V8 N19 N Y N 28 7V8 C20 C Y N 29 7V8 O8 O N N 30 7V8 N3 N Y N 31 7V8 O49 O N N 32 7V8 C50 C N N 33 7V8 C51 C N N 34 7V8 N52 N N N 35 7V8 O12 O N N 36 7V8 C14 C Y N 37 7V8 N24 N Y N 38 7V8 C25 C Y N 39 7V8 C30 C Y N 40 7V8 O37 O N N 41 7V8 C38 C N N 42 7V8 C39 C N N 43 7V8 N40 N N N 44 7V8 H56 H N N 45 7V8 H54 H N N 46 7V8 H63 H N N 47 7V8 H65 H N N 48 7V8 H62 H N N 49 7V8 H61 H N N 50 7V8 H53 H N N 51 7V8 H57 H N N 52 7V8 H59 H N N 53 7V8 H55 H N N 54 7V8 H60 H N N 55 7V8 H66 H N N 56 7V8 H34 H N N 57 7V8 H35 H N N 58 7V8 H69 H N N 59 7V8 H70 H N N 60 7V8 H67 H N N 61 7V8 H68 H N N 62 7V8 H58 H N N 63 7V8 H92 H N N 64 7V8 H91 H N N 65 7V8 H94 H N N 66 7V8 H93 H N N 67 7V8 H97 H N N 68 7V8 H95 H N N 69 7V8 H64 H N N 70 7V8 H71 H N N 71 7V8 H72 H N N 72 7V8 H73 H N N 73 7V8 H74 H N N 74 7V8 H31 H N N 75 7V8 H32 H N N 76 DC OP3 O N N 77 DC P P N N 78 DC OP1 O N N 79 DC OP2 O N N 80 DC "O5'" O N N 81 DC "C5'" C N N 82 DC "C4'" C N R 83 DC "O4'" O N N 84 DC "C3'" C N S 85 DC "O3'" O N N 86 DC "C2'" C N N 87 DC "C1'" C N R 88 DC N1 N N N 89 DC C2 C N N 90 DC O2 O N N 91 DC N3 N N N 92 DC C4 C N N 93 DC N4 N N N 94 DC C5 C N N 95 DC C6 C N N 96 DC HOP3 H N N 97 DC HOP2 H N N 98 DC "H5'" H N N 99 DC "H5''" H N N 100 DC "H4'" H N N 101 DC "H3'" H N N 102 DC "HO3'" H N N 103 DC "H2'" H N N 104 DC "H2''" H N N 105 DC "H1'" H N N 106 DC H41 H N N 107 DC H42 H N N 108 DC H5 H N N 109 DC H6 H N N 110 DG OP3 O N N 111 DG P P N N 112 DG OP1 O N N 113 DG OP2 O N N 114 DG "O5'" O N N 115 DG "C5'" C N N 116 DG "C4'" C N R 117 DG "O4'" O N N 118 DG "C3'" C N S 119 DG "O3'" O N N 120 DG "C2'" C N N 121 DG "C1'" C N R 122 DG N9 N Y N 123 DG C8 C Y N 124 DG N7 N Y N 125 DG C5 C Y N 126 DG C6 C N N 127 DG O6 O N N 128 DG N1 N N N 129 DG C2 C N N 130 DG N2 N N N 131 DG N3 N N N 132 DG C4 C Y N 133 DG HOP3 H N N 134 DG HOP2 H N N 135 DG "H5'" H N N 136 DG "H5''" H N N 137 DG "H4'" H N N 138 DG "H3'" H N N 139 DG "HO3'" H N N 140 DG "H2'" H N N 141 DG "H2''" H N N 142 DG "H1'" H N N 143 DG H8 H N N 144 DG H1 H N N 145 DG H21 H N N 146 DG H22 H N N 147 DT OP3 O N N 148 DT P P N N 149 DT OP1 O N N 150 DT OP2 O N N 151 DT "O5'" O N N 152 DT "C5'" C N N 153 DT "C4'" C N R 154 DT "O4'" O N N 155 DT "C3'" C N S 156 DT "O3'" O N N 157 DT "C2'" C N N 158 DT "C1'" C N R 159 DT N1 N N N 160 DT C2 C N N 161 DT O2 O N N 162 DT N3 N N N 163 DT C4 C N N 164 DT O4 O N N 165 DT C5 C N N 166 DT C7 C N N 167 DT C6 C N N 168 DT HOP3 H N N 169 DT HOP2 H N N 170 DT "H5'" H N N 171 DT "H5''" H N N 172 DT "H4'" H N N 173 DT "H3'" H N N 174 DT "HO3'" H N N 175 DT "H2'" H N N 176 DT "H2''" H N N 177 DT "H1'" H N N 178 DT H3 H N N 179 DT H71 H N N 180 DT H72 H N N 181 DT H73 H N N 182 DT H6 H N N 183 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7V8 N36 C35 sing N N 1 7V8 C35 C34 sing N N 2 7V8 C34 O33 sing N N 3 7V8 O33 C16 sing N N 4 7V8 C16 C15 doub Y N 5 7V8 C16 C17 sing Y N 6 7V8 C20 C17 sing Y N 7 7V8 C20 C21 doub Y N 8 7V8 N52 C51 sing N N 9 7V8 C15 C10 sing Y N 10 7V8 C17 C18 doub Y N 11 7V8 O8 C7 doub N N 12 7V8 C21 C22 sing Y N 13 7V8 C51 C50 sing N N 14 7V8 C10 N9 sing N N 15 7V8 C10 N19 doub Y N 16 7V8 C50 O49 sing N N 17 7V8 C7 N9 sing N N 18 7V8 C7 C2 sing N N 19 7V8 C18 N19 sing Y N 20 7V8 C18 C23 sing Y N 21 7V8 C22 C23 doub Y N 22 7V8 C1 C2 doub Y N 23 7V8 C1 C6 sing Y N 24 7V8 C2 N3 sing Y N 25 7V8 O49 C6 sing N N 26 7V8 C6 C5 doub Y N 27 7V8 N3 C4 doub Y N 28 7V8 C5 C4 sing Y N 29 7V8 C4 C11 sing N N 30 7V8 C11 N13 sing N N 31 7V8 C11 O12 doub N N 32 7V8 N13 C14 sing N N 33 7V8 N24 C14 doub Y N 34 7V8 N24 C25 sing Y N 35 7V8 C14 C28 sing Y N 36 7V8 C29 C25 sing Y N 37 7V8 C29 C30 doub Y N 38 7V8 C25 C26 doub Y N 39 7V8 C28 C27 doub Y N 40 7V8 C30 C31 sing Y N 41 7V8 C26 C27 sing Y N 42 7V8 C26 C32 sing Y N 43 7V8 C27 O37 sing N N 44 7V8 C31 C32 doub Y N 45 7V8 O37 C38 sing N N 46 7V8 C38 C39 sing N N 47 7V8 C39 N40 sing N N 48 7V8 N13 H56 sing N N 49 7V8 C5 H54 sing N N 50 7V8 C29 H63 sing N N 51 7V8 C31 H65 sing N N 52 7V8 C28 H62 sing N N 53 7V8 C23 H61 sing N N 54 7V8 C1 H53 sing N N 55 7V8 C15 H57 sing N N 56 7V8 C21 H59 sing N N 57 7V8 N9 H55 sing N N 58 7V8 C22 H60 sing N N 59 7V8 C32 H66 sing N N 60 7V8 N36 H34 sing N N 61 7V8 N36 H35 sing N N 62 7V8 C35 H69 sing N N 63 7V8 C35 H70 sing N N 64 7V8 C34 H67 sing N N 65 7V8 C34 H68 sing N N 66 7V8 C20 H58 sing N N 67 7V8 C50 H92 sing N N 68 7V8 C50 H91 sing N N 69 7V8 C51 H94 sing N N 70 7V8 C51 H93 sing N N 71 7V8 N52 H97 sing N N 72 7V8 N52 H95 sing N N 73 7V8 C30 H64 sing N N 74 7V8 C38 H71 sing N N 75 7V8 C38 H72 sing N N 76 7V8 C39 H73 sing N N 77 7V8 C39 H74 sing N N 78 7V8 N40 H31 sing N N 79 7V8 N40 H32 sing N N 80 DC OP3 P sing N N 81 DC OP3 HOP3 sing N N 82 DC P OP1 doub N N 83 DC P OP2 sing N N 84 DC P "O5'" sing N N 85 DC OP2 HOP2 sing N N 86 DC "O5'" "C5'" sing N N 87 DC "C5'" "C4'" sing N N 88 DC "C5'" "H5'" sing N N 89 DC "C5'" "H5''" sing N N 90 DC "C4'" "O4'" sing N N 91 DC "C4'" "C3'" sing N N 92 DC "C4'" "H4'" sing N N 93 DC "O4'" "C1'" sing N N 94 DC "C3'" "O3'" sing N N 95 DC "C3'" "C2'" sing N N 96 DC "C3'" "H3'" sing N N 97 DC "O3'" "HO3'" sing N N 98 DC "C2'" "C1'" sing N N 99 DC "C2'" "H2'" sing N N 100 DC "C2'" "H2''" sing N N 101 DC "C1'" N1 sing N N 102 DC "C1'" "H1'" sing N N 103 DC N1 C2 sing N N 104 DC N1 C6 sing N N 105 DC C2 O2 doub N N 106 DC C2 N3 sing N N 107 DC N3 C4 doub N N 108 DC C4 N4 sing N N 109 DC C4 C5 sing N N 110 DC N4 H41 sing N N 111 DC N4 H42 sing N N 112 DC C5 C6 doub N N 113 DC C5 H5 sing N N 114 DC C6 H6 sing N N 115 DG OP3 P sing N N 116 DG OP3 HOP3 sing N N 117 DG P OP1 doub N N 118 DG P OP2 sing N N 119 DG P "O5'" sing N N 120 DG OP2 HOP2 sing N N 121 DG "O5'" "C5'" sing N N 122 DG "C5'" "C4'" sing N N 123 DG "C5'" "H5'" sing N N 124 DG "C5'" "H5''" sing N N 125 DG "C4'" "O4'" sing N N 126 DG "C4'" "C3'" sing N N 127 DG "C4'" "H4'" sing N N 128 DG "O4'" "C1'" sing N N 129 DG "C3'" "O3'" sing N N 130 DG "C3'" "C2'" sing N N 131 DG "C3'" "H3'" sing N N 132 DG "O3'" "HO3'" sing N N 133 DG "C2'" "C1'" sing N N 134 DG "C2'" "H2'" sing N N 135 DG "C2'" "H2''" sing N N 136 DG "C1'" N9 sing N N 137 DG "C1'" "H1'" sing N N 138 DG N9 C8 sing Y N 139 DG N9 C4 sing Y N 140 DG C8 N7 doub Y N 141 DG C8 H8 sing N N 142 DG N7 C5 sing Y N 143 DG C5 C6 sing N N 144 DG C5 C4 doub Y N 145 DG C6 O6 doub N N 146 DG C6 N1 sing N N 147 DG N1 C2 sing N N 148 DG N1 H1 sing N N 149 DG C2 N2 sing N N 150 DG C2 N3 doub N N 151 DG N2 H21 sing N N 152 DG N2 H22 sing N N 153 DG N3 C4 sing N N 154 DT OP3 P sing N N 155 DT OP3 HOP3 sing N N 156 DT P OP1 doub N N 157 DT P OP2 sing N N 158 DT P "O5'" sing N N 159 DT OP2 HOP2 sing N N 160 DT "O5'" "C5'" sing N N 161 DT "C5'" "C4'" sing N N 162 DT "C5'" "H5'" sing N N 163 DT "C5'" "H5''" sing N N 164 DT "C4'" "O4'" sing N N 165 DT "C4'" "C3'" sing N N 166 DT "C4'" "H4'" sing N N 167 DT "O4'" "C1'" sing N N 168 DT "C3'" "O3'" sing N N 169 DT "C3'" "C2'" sing N N 170 DT "C3'" "H3'" sing N N 171 DT "O3'" "HO3'" sing N N 172 DT "C2'" "C1'" sing N N 173 DT "C2'" "H2'" sing N N 174 DT "C2'" "H2''" sing N N 175 DT "C1'" N1 sing N N 176 DT "C1'" "H1'" sing N N 177 DT N1 C2 sing N N 178 DT N1 C6 sing N N 179 DT C2 O2 doub N N 180 DT C2 N3 sing N N 181 DT N3 C4 sing N N 182 DT N3 H3 sing N N 183 DT C4 O4 doub N N 184 DT C4 C5 sing N N 185 DT C5 C7 sing N N 186 DT C5 C6 doub N N 187 DT C7 H71 sing N N 188 DT C7 H72 sing N N 189 DT C7 H73 sing N N 190 DT C6 H6 sing N N 191 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9JX5 'double helix' 9JX5 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 7 1_555 A DC 4 1_555 -0.610 -0.149 -0.335 -7.154 -5.460 -0.515 1 A_DG7:DC4_A A 7 ? A 4 ? 19 1 1 A DG 8 1_555 A DG 3 1_555 -1.956 -3.158 0.232 -8.562 4.585 91.251 2 A_DG8:DG3_A A 8 ? A 3 ? 6 3 1 A DG 9 1_555 A DG 14 1_555 -1.822 -3.260 -0.328 6.450 1.791 93.502 3 A_DG9:DG14_A A 9 ? A 14 ? 6 3 1 A DG 2 1_555 A DG 21 1_555 1.777 3.203 0.324 -6.922 -1.196 -94.240 4 A_DG2:DG21_A A 2 ? A 21 ? 6 3 1 A DG 15 1_555 A DG 20 1_555 1.931 3.116 -0.604 11.702 -3.972 -92.137 5 A_DG15:DG20_A A 15 ? A 20 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 7 1_555 A DC 4 1_555 A DG 8 1_555 A DG 3 1_555 -1.532 -3.204 0.652 -169.936 23.110 -159.689 1.595 -0.814 0.451 -11.564 -85.034 -178.503 1 AA_DG7DG8:DG3DC4_AA A 7 ? A 4 ? A 8 ? A 3 ? 1 A DG 8 1_555 A DG 3 1_555 A DG 9 1_555 A DG 14 1_555 -1.405 -2.882 -0.172 170.123 -48.628 151.185 -1.449 0.674 -0.306 -24.327 -85.108 179.238 2 AA_DG8DG9:DG14DG3_AA A 8 ? A 3 ? A 9 ? A 14 ? 1 A DG 9 1_555 A DG 14 1_555 A DG 2 1_555 A DG 21 1_555 2.225 3.103 -0.015 9.076 -2.245 -179.404 -1.551 1.112 -0.016 1.122 4.538 -179.406 3 AA_DG9DG2:DG21DG14_AA A 9 ? A 14 ? A 2 ? A 21 ? 1 A DG 2 1_555 A DG 21 1_555 A DG 15 1_555 A DG 20 1_555 2.231 2.647 -1.599 -168.222 49.276 -77.728 -1.222 1.464 0.084 -24.884 -84.952 -176.334 4 AA_DG2DG15:DG20DG21_AA A 2 ? A 21 ? A 15 ? A 20 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 22004038 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 9JX5 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_