HEADER HYDROLASE 16-OCT-24 9K1G TITLE COMPLEX STRUCTURE OF ENDO-1,3-FUCANASE (FUN174SB) FROM GH174 FAMILY TITLE 2 WITH FUCOTETRAOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDO-1.3-FUCANASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPARTOBACTERIA BACTERIUM; SOURCE 3 ORGANISM_TAXID: 2052183; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ENDO-1.3-FUCANASE, GH174, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.N.CHEN,Y.G.CHANG REVDAT 2 09-JUL-25 9K1G 1 COMPND REMARK LINK ATOM REVDAT 1 18-DEC-24 9K1G 0 JRNL AUTH G.N.CHEN,Y.G.CHANG JRNL TITL COMPLEX STRUCTURE OF ENDO-1.3-FUCANASE (FUN174SB) FROM GH174 JRNL TITL 2 FAMILY WITH FUCOTETRAOSE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 28649 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.6600 - 6.0200 0.99 1961 146 0.2060 0.2318 REMARK 3 2 6.0200 - 4.7800 1.00 1911 144 0.2063 0.2121 REMARK 3 3 4.7800 - 4.1800 1.00 1933 145 0.1854 0.1847 REMARK 3 4 4.1800 - 3.7900 0.98 1887 141 0.2292 0.2597 REMARK 3 5 3.7900 - 3.5200 0.92 1777 131 0.2862 0.3075 REMARK 3 6 3.5200 - 3.3200 1.00 1893 143 0.2344 0.3339 REMARK 3 7 3.3200 - 3.1500 1.00 1919 143 0.2471 0.2942 REMARK 3 8 3.1500 - 3.0100 1.00 1922 144 0.2674 0.3294 REMARK 3 9 3.0100 - 2.9000 1.00 1922 143 0.2866 0.3688 REMARK 3 10 2.9000 - 2.8000 1.00 1922 145 0.2751 0.3804 REMARK 3 11 2.8000 - 2.7100 1.00 1867 140 0.2974 0.3563 REMARK 3 12 2.7100 - 2.6300 1.00 1931 144 0.2853 0.3722 REMARK 3 13 2.6300 - 2.5600 1.00 1911 143 0.2872 0.3314 REMARK 3 14 2.5600 - 2.5000 1.00 1898 143 0.3080 0.3389 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7358 REMARK 3 ANGLE : 0.618 10060 REMARK 3 CHIRALITY : 0.045 1090 REMARK 3 PLANARITY : 0.005 1268 REMARK 3 DIHEDRAL : 6.283 970 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9K1G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 21-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1300052668. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97923 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28897 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 36.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.17700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.67600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M POTASSIUM BROMIDE, 30% W/V REMARK 280 POLYETHYLENE GLYCOL MONOMETHYL ETHER 2,000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.02550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 6 REMARK 465 ALA A 7 REMARK 465 ALA A 8 REMARK 465 PHE A 9 REMARK 465 PHE A 10 REMARK 465 PHE A 11 REMARK 465 ILE A 12 REMARK 465 SER A 13 REMARK 465 LEU A 14 REMARK 465 SER A 15 REMARK 465 PRO A 16 REMARK 465 LEU A 17 REMARK 465 HIS A 18 REMARK 465 ALA A 19 REMARK 465 VAL A 20 REMARK 465 ASP A 21 REMARK 465 ALA A 22 REMARK 465 THR A 23 REMARK 465 ALA A 24 REMARK 465 THR A 25 REMARK 465 LYS A 26 REMARK 465 ASN A 27 REMARK 465 ILE A 28 REMARK 465 ALA A 29 REMARK 465 SER A 30 REMARK 465 SER A 480 REMARK 465 ASN A 481 REMARK 465 PRO A 482 REMARK 465 SER A 483 REMARK 465 LYS A 484 REMARK 465 ALA A 485 REMARK 465 ALA A 486 REMARK 465 ALA A 487 REMARK 465 LEU A 488 REMARK 465 GLU A 489 REMARK 465 HIS A 490 REMARK 465 HIS A 491 REMARK 465 HIS A 492 REMARK 465 HIS A 493 REMARK 465 HIS A 494 REMARK 465 HIS A 495 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 LEU B 5 REMARK 465 LEU B 6 REMARK 465 ALA B 7 REMARK 465 ALA B 8 REMARK 465 PHE B 9 REMARK 465 PHE B 10 REMARK 465 PHE B 11 REMARK 465 ILE B 12 REMARK 465 SER B 13 REMARK 465 LEU B 14 REMARK 465 SER B 15 REMARK 465 PRO B 16 REMARK 465 LEU B 17 REMARK 465 HIS B 18 REMARK 465 ALA B 19 REMARK 465 VAL B 20 REMARK 465 ASP B 21 REMARK 465 ALA B 22 REMARK 465 THR B 23 REMARK 465 ALA B 24 REMARK 465 THR B 25 REMARK 465 LYS B 26 REMARK 465 ASN B 27 REMARK 465 ILE B 28 REMARK 465 ALA B 29 REMARK 465 SER B 30 REMARK 465 SER B 480 REMARK 465 ASN B 481 REMARK 465 PRO B 482 REMARK 465 SER B 483 REMARK 465 LYS B 484 REMARK 465 ALA B 485 REMARK 465 ALA B 486 REMARK 465 ALA B 487 REMARK 465 LEU B 488 REMARK 465 GLU B 489 REMARK 465 HIS B 490 REMARK 465 HIS B 491 REMARK 465 HIS B 492 REMARK 465 HIS B 493 REMARK 465 HIS B 494 REMARK 465 HIS B 495 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 49 CG CD CE NZ REMARK 470 LYS A 64 CD CE NZ REMARK 470 ALA A 119 CB REMARK 470 LYS A 122 CG CD CE NZ REMARK 470 ARG A 340 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 49 CG CD CE NZ REMARK 470 LYS B 64 CG CD CE NZ REMARK 470 ALA B 119 CB REMARK 470 LYS B 122 CG CD CE NZ REMARK 470 ARG B 340 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY B 98 O HOH B 501 2.06 REMARK 500 OD2 ASP B 129 OH TYR B 152 2.07 REMARK 500 O HOH A 685 O HOH A 703 2.10 REMARK 500 OG SER B 106 O HOH B 502 2.10 REMARK 500 O GLU B 157 O HOH B 503 2.13 REMARK 500 O HOH B 501 O HOH B 535 2.13 REMARK 500 O GLY B 109 O HOH B 502 2.15 REMARK 500 O ALA B 310 O HOH B 504 2.15 REMARK 500 O GLU B 378 O HOH B 505 2.16 REMARK 500 O ALA B 53 O HOH B 506 2.17 REMARK 500 OE2 GLU A 210 O HOH A 501 2.18 REMARK 500 OD1 ASN B 390 O HOH B 507 2.18 REMARK 500 O HOH A 519 O HOH A 589 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 35 NH1 ARG A 260 2555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 66 109.21 -53.38 REMARK 500 ASP A 85 -166.00 -103.87 REMARK 500 SER A 106 -169.22 -107.05 REMARK 500 GLN A 115 70.48 58.45 REMARK 500 ALA A 119 -111.79 53.28 REMARK 500 ASN A 120 55.30 -113.14 REMARK 500 LYS A 122 -11.50 69.26 REMARK 500 ASP A 129 -68.16 -138.66 REMARK 500 SER A 149 -85.40 -90.60 REMARK 500 PRO A 206 107.44 -55.10 REMARK 500 MET A 258 101.60 -40.13 REMARK 500 ALA A 264 -120.04 61.35 REMARK 500 THR A 329 -73.73 -109.10 REMARK 500 SER A 408 -10.44 65.26 REMARK 500 ASP A 435 13.00 -158.60 REMARK 500 SER A 436 13.74 57.62 REMARK 500 SER A 462 104.75 -165.64 REMARK 500 SER B 106 -158.61 -107.98 REMARK 500 GLN B 115 70.17 56.99 REMARK 500 ALA B 119 -110.25 58.60 REMARK 500 ASN B 120 63.21 -117.46 REMARK 500 LYS B 122 -47.85 63.55 REMARK 500 ASP B 129 -59.16 -146.71 REMARK 500 PRO B 141 -61.70 -92.03 REMARK 500 SER B 149 -87.66 -91.97 REMARK 500 MET B 258 104.60 -41.08 REMARK 500 ALA B 264 -117.09 61.77 REMARK 500 LEU B 312 77.73 -111.00 REMARK 500 GLU B 423 12.39 58.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 735 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 736 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH B 727 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH B 728 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH B 730 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH B 731 DISTANCE = 7.28 ANGSTROMS DBREF 9K1G A -1 495 PDB 9K1G 9K1G -1 495 DBREF 9K1G B -1 495 PDB 9K1G 9K1G -1 495 SEQRES 1 A 497 MET GLY MET LYS HIS HIS LEU LEU ALA ALA PHE PHE PHE SEQRES 2 A 497 ILE SER LEU SER PRO LEU HIS ALA VAL ASP ALA THR ALA SEQRES 3 A 497 THR LYS ASN ILE ALA SER PRO LEU PHE GLN GLU GLN MET SEQRES 4 A 497 PHE SER LEU LEU PRO VAL ALA PRO ASP PHE PRO LYS THR SEQRES 5 A 497 ASP PHE ALA VAL SER THR THR THR ASP PHE VAL PRO SER SEQRES 6 A 497 LYS GLY PRO TRP SER THR THR CYS SER GLU GLU SER VAL SEQRES 7 A 497 PHE LEU ARG SER PHE HIS THR VAL ASP LEU GLU GLY LYS SEQRES 8 A 497 PRO ILE GLU LEU ARG VAL GLY LYS GLY GLY HIS LEU TYR SEQRES 9 A 497 SER ILE GLN SER ALA ILE GLY GLU LEU VAL PRO PRO GLN SEQRES 10 A 497 TRP ARG HIS ALA ASN HIS LYS THR VAL SER PRO TRP ASN SEQRES 11 A 497 ASP GLU VAL TRP GLN ALA VAL ALA VAL THR SER ASP PRO SEQRES 12 A 497 ASN LYS VAL PHE VAL HIS GLN SER GLY CYS TYR VAL LYS SEQRES 13 A 497 PRO GLU GLU PRO PRO PHE TYR ALA PRO CYS LEU ALA GLN SEQRES 14 A 497 SER TRP SER GLN GLU ASP LYS THR PHE THR MET LEU SER SEQRES 15 A 497 TRP GLY ILE VAL PRO GLN VAL THR SER THR LEU VAL SER SEQRES 16 A 497 GLU VAL LEU TYR TYR THR ARG TYR ARG PHE VAL ALA PRO SEQRES 17 A 497 GLY VAL VAL GLU VAL THR SER GLY LEU PHE ASP PHE GLY SEQRES 18 A 497 LYS ARG ASN TYR LEU TRP LEU ASN THR PRO TRP GLY GLY SEQRES 19 A 497 VAL ARG GLN THR ALA LEU GLY GLU LEU TRP ILE ALA ASP SEQRES 20 A 497 LYS SER GLU ARG GLY THR ALA LYS TRP LEU ASN PRO MET SEQRES 21 A 497 PRO ARG PHE GLY ALA ALA HIS ASP GLY ALA LEU ASP SER SEQRES 22 A 497 ALA GLY ASN THR GLY GLY TRP MET ALA PHE ALA GLU GLU SEQRES 23 A 497 GLY GLN ASP PRO ASN ARG TYR ALA MET GLY LEU THR PHE SEQRES 24 A 497 GLY ARG ASP VAL PHE PRO THR THR GLY MET ASN SER ALA SEQRES 25 A 497 LEU LEU PRO ARG ASP LYS THR LEU ILE ARG PHE GLY GLN SEQRES 26 A 497 ALA GLY GLY LYS GLU THR ARG ASN TYR ILE VAL ALA VAL SEQRES 27 A 497 VAL ILE PRO ARG LEU GLY VAL ILE SER GLY HIS GLY VAL SEQRES 28 A 497 TRP TRP ARG TYR TYR MET ALA PHE GLY ALA PHE GLU ALA SEQRES 29 A 497 LEU LYS LYS GLN CYS PRO ASP TRP ALA ASP LYS THR SER SEQRES 30 A 497 GLY GLY GLU MET VAL VAL PRO SER ILE SER SER GLU THR SEQRES 31 A 497 ARG ASN PHE GLU LYS CYS ILE GLU SER GLY VAL ILE PRO SEQRES 32 A 497 ARG ASP ALA THR LEU GLY SER ASP LEU SER ARG SER HIS SEQRES 33 A 497 VAL PHE SER PRO TRP PRO LYS PRO GLU TYR VAL PRO VAL SEQRES 34 A 497 PHE ALA PHE GLN LEU LYS LYS ASP SER THR TRP VAL VAL SEQRES 35 A 497 THR THR ASP PRO SER LYS TYR ALA ALA LEU GLY GLU LYS SEQRES 36 A 497 ASP SER LYS GLY GLN GLU LEU TYR SER VAL ALA MET SER SEQRES 37 A 497 PHE SER GLU ILE ARG LEU LEU GLY PHE THR SER ILE SER SEQRES 38 A 497 SER ASN PRO SER LYS ALA ALA ALA LEU GLU HIS HIS HIS SEQRES 39 A 497 HIS HIS HIS SEQRES 1 B 497 MET GLY MET LYS HIS HIS LEU LEU ALA ALA PHE PHE PHE SEQRES 2 B 497 ILE SER LEU SER PRO LEU HIS ALA VAL ASP ALA THR ALA SEQRES 3 B 497 THR LYS ASN ILE ALA SER PRO LEU PHE GLN GLU GLN MET SEQRES 4 B 497 PHE SER LEU LEU PRO VAL ALA PRO ASP PHE PRO LYS THR SEQRES 5 B 497 ASP PHE ALA VAL SER THR THR THR ASP PHE VAL PRO SER SEQRES 6 B 497 LYS GLY PRO TRP SER THR THR CYS SER GLU GLU SER VAL SEQRES 7 B 497 PHE LEU ARG SER PHE HIS THR VAL ASP LEU GLU GLY LYS SEQRES 8 B 497 PRO ILE GLU LEU ARG VAL GLY LYS GLY GLY HIS LEU TYR SEQRES 9 B 497 SER ILE GLN SER ALA ILE GLY GLU LEU VAL PRO PRO GLN SEQRES 10 B 497 TRP ARG HIS ALA ASN HIS LYS THR VAL SER PRO TRP ASN SEQRES 11 B 497 ASP GLU VAL TRP GLN ALA VAL ALA VAL THR SER ASP PRO SEQRES 12 B 497 ASN LYS VAL PHE VAL HIS GLN SER GLY CYS TYR VAL LYS SEQRES 13 B 497 PRO GLU GLU PRO PRO PHE TYR ALA PRO CYS LEU ALA GLN SEQRES 14 B 497 SER TRP SER GLN GLU ASP LYS THR PHE THR MET LEU SER SEQRES 15 B 497 TRP GLY ILE VAL PRO GLN VAL THR SER THR LEU VAL SER SEQRES 16 B 497 GLU VAL LEU TYR TYR THR ARG TYR ARG PHE VAL ALA PRO SEQRES 17 B 497 GLY VAL VAL GLU VAL THR SER GLY LEU PHE ASP PHE GLY SEQRES 18 B 497 LYS ARG ASN TYR LEU TRP LEU ASN THR PRO TRP GLY GLY SEQRES 19 B 497 VAL ARG GLN THR ALA LEU GLY GLU LEU TRP ILE ALA ASP SEQRES 20 B 497 LYS SER GLU ARG GLY THR ALA LYS TRP LEU ASN PRO MET SEQRES 21 B 497 PRO ARG PHE GLY ALA ALA HIS ASP GLY ALA LEU ASP SER SEQRES 22 B 497 ALA GLY ASN THR GLY GLY TRP MET ALA PHE ALA GLU GLU SEQRES 23 B 497 GLY GLN ASP PRO ASN ARG TYR ALA MET GLY LEU THR PHE SEQRES 24 B 497 GLY ARG ASP VAL PHE PRO THR THR GLY MET ASN SER ALA SEQRES 25 B 497 LEU LEU PRO ARG ASP LYS THR LEU ILE ARG PHE GLY GLN SEQRES 26 B 497 ALA GLY GLY LYS GLU THR ARG ASN TYR ILE VAL ALA VAL SEQRES 27 B 497 VAL ILE PRO ARG LEU GLY VAL ILE SER GLY HIS GLY VAL SEQRES 28 B 497 TRP TRP ARG TYR TYR MET ALA PHE GLY ALA PHE GLU ALA SEQRES 29 B 497 LEU LYS LYS GLN CYS PRO ASP TRP ALA ASP LYS THR SER SEQRES 30 B 497 GLY GLY GLU MET VAL VAL PRO SER ILE SER SER GLU THR SEQRES 31 B 497 ARG ASN PHE GLU LYS CYS ILE GLU SER GLY VAL ILE PRO SEQRES 32 B 497 ARG ASP ALA THR LEU GLY SER ASP LEU SER ARG SER HIS SEQRES 33 B 497 VAL PHE SER PRO TRP PRO LYS PRO GLU TYR VAL PRO VAL SEQRES 34 B 497 PHE ALA PHE GLN LEU LYS LYS ASP SER THR TRP VAL VAL SEQRES 35 B 497 THR THR ASP PRO SER LYS TYR ALA ALA LEU GLY GLU LYS SEQRES 36 B 497 ASP SER LYS GLY GLN GLU LEU TYR SER VAL ALA MET SER SEQRES 37 B 497 PHE SER GLU ILE ARG LEU LEU GLY PHE THR SER ILE SER SEQRES 38 B 497 SER ASN PRO SER LYS ALA ALA ALA LEU GLU HIS HIS HIS SEQRES 39 B 497 HIS HIS HIS HET X6Y C 1 15 HET X2Y C 2 18 HET FUC C 3 10 HET X6Y C 4 14 HET X6Y D 1 15 HET X2Y D 2 18 HET FUC D 3 10 HET X6Y D 4 14 HETNAM X6Y 2-O-SULFO-ALPHA-L-FUCOPYRANOSE HETNAM X2Y 2,4-DI-O-SULFO-ALPHA-L-FUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN X6Y 6-DEOXY-2-O-SULFO-ALPHA-L-GALACTOPYRANOSE HETSYN X2Y 6-DEOXY-2,4-DI-O-SULFO-ALPHA-L-GALACTOPYRANOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 X6Y 4(C6 H12 O8 S) FORMUL 3 X2Y 2(C6 H12 O11 S2) FORMUL 3 FUC 2(C6 H12 O5) FORMUL 5 HOH *467(H2 O) HELIX 1 AA1 PRO A 31 MET A 37 1 7 HELIX 2 AA2 PHE A 38 LEU A 41 5 4 HELIX 3 AA3 SER A 72 SER A 75 5 4 HELIX 4 AA4 GLY A 273 THR A 275 5 3 HELIX 5 AA5 ASN A 308 LEU A 312 5 5 HELIX 6 AA6 PHE A 360 LYS A 373 1 14 HELIX 7 AA7 ASN A 390 SER A 397 1 8 HELIX 8 AA8 ASP A 443 ALA A 448 1 6 HELIX 9 AA9 LEU B 32 MET B 37 1 6 HELIX 10 AB1 SER B 72 SER B 75 5 4 HELIX 11 AB2 GLY B 273 THR B 275 5 3 HELIX 12 AB3 ASN B 308 LEU B 312 5 5 HELIX 13 AB4 PHE B 360 ASP B 372 1 13 HELIX 14 AB5 ASN B 390 SER B 397 1 8 HELIX 15 AB6 ASP B 443 ALA B 448 1 6 SHEET 1 AA1 4 SER A 55 THR A 57 0 SHEET 2 AA1 4 PHE A 77 VAL A 84 -1 O SER A 80 N THR A 57 SHEET 3 AA1 4 PRO A 90 GLY A 96 -1 O VAL A 95 N ARG A 79 SHEET 4 AA1 4 LEU A 101 GLN A 105 -1 O GLN A 105 N GLU A 92 SHEET 1 AA2 6 VAL A 144 HIS A 147 0 SHEET 2 AA2 6 GLN A 133 THR A 138 -1 N ALA A 136 O VAL A 146 SHEET 3 AA2 6 TRP A 225 VAL A 233 -1 O TRP A 225 N VAL A 137 SHEET 4 AA2 6 TYR A 332 ILE A 338 -1 O VAL A 337 N THR A 228 SHEET 5 AA2 6 LEU A 318 ALA A 324 -1 N LEU A 318 O ILE A 338 SHEET 6 AA2 6 LEU A 269 SER A 271 -1 N ASP A 270 O ILE A 319 SHEET 1 AA3 9 CYS A 164 SER A 170 0 SHEET 2 AA3 9 THR A 175 TRP A 181 -1 O LEU A 179 N ALA A 166 SHEET 3 AA3 9 VAL A 195 ALA A 205 -1 O TYR A 197 N SER A 180 SHEET 4 AA3 9 VAL A 208 ASP A 217 -1 O GLY A 214 N TYR A 198 SHEET 5 AA3 9 HIS A 347 ALA A 359 -1 O MET A 355 N VAL A 209 SHEET 6 AA3 9 TYR A 291 THR A 296 -1 N GLY A 294 O ALA A 356 SHEET 7 AA3 9 TRP A 278 ALA A 282 -1 N PHE A 281 O MET A 293 SHEET 8 AA3 9 GLU A 240 ALA A 244 -1 N GLU A 240 O ALA A 282 SHEET 9 AA3 9 ALA A 252 TRP A 254 -1 O LYS A 253 N ILE A 243 SHEET 1 AA4 6 CYS A 164 SER A 170 0 SHEET 2 AA4 6 THR A 175 TRP A 181 -1 O LEU A 179 N ALA A 166 SHEET 3 AA4 6 VAL A 195 ALA A 205 -1 O TYR A 197 N SER A 180 SHEET 4 AA4 6 VAL A 208 ASP A 217 -1 O GLY A 214 N TYR A 198 SHEET 5 AA4 6 HIS A 347 ALA A 359 -1 O MET A 355 N VAL A 209 SHEET 6 AA4 6 SER A 375 GLU A 378 -1 O GLY A 377 N TRP A 350 SHEET 1 AA5 4 THR A 405 LEU A 406 0 SHEET 2 AA5 4 TRP A 438 THR A 441 1 O VAL A 440 N THR A 405 SHEET 3 AA5 4 VAL A 425 LEU A 432 -1 N PHE A 428 O THR A 441 SHEET 4 AA5 4 PHE A 467 THR A 476 -1 O SER A 468 N GLN A 431 SHEET 1 AA6 2 ALA A 449 LYS A 453 0 SHEET 2 AA6 2 GLU A 459 TYR A 461 -1 O LEU A 460 N LEU A 450 SHEET 1 AA7 5 SER B 55 THR B 57 0 SHEET 2 AA7 5 PHE B 77 VAL B 84 -1 O HIS B 82 N SER B 55 SHEET 3 AA7 5 PRO B 90 GLY B 96 -1 O ILE B 91 N THR B 83 SHEET 4 AA7 5 LEU B 101 SER B 106 -1 O GLN B 105 N GLU B 92 SHEET 5 AA7 5 GLY B 109 GLU B 110 -1 O GLY B 109 N SER B 106 SHEET 1 AA8 6 VAL B 144 HIS B 147 0 SHEET 2 AA8 6 GLN B 133 THR B 138 -1 N THR B 138 O VAL B 144 SHEET 3 AA8 6 TRP B 225 VAL B 233 -1 O TRP B 225 N VAL B 137 SHEET 4 AA8 6 TYR B 332 ILE B 338 -1 O VAL B 337 N THR B 228 SHEET 5 AA8 6 LEU B 318 ALA B 324 -1 N LEU B 318 O ILE B 338 SHEET 6 AA8 6 LEU B 269 SER B 271 -1 N ASP B 270 O ILE B 319 SHEET 1 AA9 9 CYS B 164 SER B 170 0 SHEET 2 AA9 9 THR B 175 TRP B 181 -1 O LEU B 179 N ALA B 166 SHEET 3 AA9 9 VAL B 195 ALA B 205 -1 O TYR B 201 N PHE B 176 SHEET 4 AA9 9 VAL B 208 ASP B 217 -1 O GLY B 214 N TYR B 198 SHEET 5 AA9 9 HIS B 347 ALA B 359 -1 O HIS B 347 N ASP B 217 SHEET 6 AA9 9 TYR B 291 THR B 296 -1 N GLY B 294 O ALA B 356 SHEET 7 AA9 9 TRP B 278 ALA B 282 -1 N MET B 279 O LEU B 295 SHEET 8 AA9 9 GLU B 240 ALA B 244 -1 N TRP B 242 O ALA B 280 SHEET 9 AA9 9 ALA B 252 TRP B 254 -1 O LYS B 253 N ILE B 243 SHEET 1 AB1 6 CYS B 164 SER B 170 0 SHEET 2 AB1 6 THR B 175 TRP B 181 -1 O LEU B 179 N ALA B 166 SHEET 3 AB1 6 VAL B 195 ALA B 205 -1 O TYR B 201 N PHE B 176 SHEET 4 AB1 6 VAL B 208 ASP B 217 -1 O GLY B 214 N TYR B 198 SHEET 5 AB1 6 HIS B 347 ALA B 359 -1 O HIS B 347 N ASP B 217 SHEET 6 AB1 6 SER B 375 GLU B 378 -1 O SER B 375 N ARG B 352 SHEET 1 AB2 4 THR B 405 LEU B 406 0 SHEET 2 AB2 4 TRP B 438 THR B 441 1 O TRP B 438 N THR B 405 SHEET 3 AB2 4 TYR B 424 LEU B 432 -1 N PHE B 430 O VAL B 439 SHEET 4 AB2 4 PHE B 467 SER B 477 -1 O SER B 468 N GLN B 431 SHEET 1 AB3 2 ALA B 449 LYS B 453 0 SHEET 2 AB3 2 GLU B 459 TYR B 461 -1 O LEU B 460 N LEU B 450 LINK O3 X6Y C 1 C1 X2Y C 2 1555 1555 1.37 LINK O3 X2Y C 2 C1 FUC C 3 1555 1555 1.38 LINK O3 FUC C 3 C1 X6Y C 4 1555 1555 1.37 LINK O3 X6Y D 1 C1 X2Y D 2 1555 1555 1.39 LINK O3 X2Y D 2 C1 FUC D 3 1555 1555 1.37 LINK O3 FUC D 3 C1 X6Y D 4 1555 1555 1.38 CISPEP 1 THR A 228 PRO A 229 0 -0.55 CISPEP 2 THR B 228 PRO B 229 0 -1.65 CRYST1 62.635 92.051 75.806 90.00 104.53 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015966 0.000000 0.004138 0.00000 SCALE2 0.000000 0.010864 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013627 0.00000 CONECT 7022 7023 7025 7028 CONECT 7023 7022 CONECT 7024 7026 7027 7036 CONECT 7025 7022 7026 7029 CONECT 7026 7024 7025 7031 CONECT 7027 7024 7028 7030 CONECT 7028 7022 7027 CONECT 7029 7025 CONECT 7030 7027 CONECT 7031 7026 7041 CONECT 7032 7033 7034 7035 7036 CONECT 7033 7032 CONECT 7034 7032 CONECT 7035 7032 CONECT 7036 7024 7032 CONECT 7037 7038 7042 7043 CONECT 7038 7037 7039 7054 CONECT 7039 7038 7040 7044 CONECT 7040 7039 7041 7049 CONECT 7041 7031 7040 7042 CONECT 7042 7037 7041 CONECT 7043 7037 CONECT 7044 7039 7055 CONECT 7045 7046 7047 7048 7049 CONECT 7046 7045 CONECT 7047 7045 CONECT 7048 7045 CONECT 7049 7040 7045 CONECT 7050 7051 7052 7053 7054 CONECT 7051 7050 CONECT 7052 7050 CONECT 7053 7050 CONECT 7054 7038 7050 CONECT 7055 7044 7056 7064 CONECT 7056 7055 7057 7061 CONECT 7057 7056 7058 7062 CONECT 7058 7057 7059 7063 CONECT 7059 7058 7060 7064 CONECT 7060 7059 CONECT 7061 7056 CONECT 7062 7057 7070 CONECT 7063 7058 CONECT 7064 7055 7059 CONECT 7065 7066 7068 7071 CONECT 7066 7065 CONECT 7067 7069 7070 7078 CONECT 7068 7065 7069 7072 CONECT 7069 7067 7068 7073 CONECT 7070 7062 7067 7071 CONECT 7071 7065 7070 CONECT 7072 7068 CONECT 7073 7069 CONECT 7074 7075 7076 7077 7078 CONECT 7075 7074 CONECT 7076 7074 CONECT 7077 7074 CONECT 7078 7067 7074 CONECT 7079 7080 7082 7085 CONECT 7080 7079 CONECT 7081 7083 7084 7093 CONECT 7082 7079 7083 7086 CONECT 7083 7081 7082 7088 CONECT 7084 7081 7085 7087 CONECT 7085 7079 7084 CONECT 7086 7082 CONECT 7087 7084 CONECT 7088 7083 7098 CONECT 7089 7090 7091 7092 7093 CONECT 7090 7089 CONECT 7091 7089 CONECT 7092 7089 CONECT 7093 7081 7089 CONECT 7094 7095 7099 7100 CONECT 7095 7094 7096 7111 CONECT 7096 7095 7097 7101 CONECT 7097 7096 7098 7106 CONECT 7098 7088 7097 7099 CONECT 7099 7094 7098 CONECT 7100 7094 CONECT 7101 7096 7112 CONECT 7102 7103 7104 7105 7106 CONECT 7103 7102 CONECT 7104 7102 CONECT 7105 7102 CONECT 7106 7097 7102 CONECT 7107 7108 7109 7110 7111 CONECT 7108 7107 CONECT 7109 7107 CONECT 7110 7107 CONECT 7111 7095 7107 CONECT 7112 7101 7113 7121 CONECT 7113 7112 7114 7118 CONECT 7114 7113 7115 7119 CONECT 7115 7114 7116 7120 CONECT 7116 7115 7117 7121 CONECT 7117 7116 CONECT 7118 7113 CONECT 7119 7114 7127 CONECT 7120 7115 CONECT 7121 7112 7116 CONECT 7122 7123 7125 7128 CONECT 7123 7122 CONECT 7124 7126 7127 7135 CONECT 7125 7122 7126 7129 CONECT 7126 7124 7125 7130 CONECT 7127 7119 7124 7128 CONECT 7128 7122 7127 CONECT 7129 7125 CONECT 7130 7126 CONECT 7131 7132 7133 7134 7135 CONECT 7132 7131 CONECT 7133 7131 CONECT 7134 7131 CONECT 7135 7124 7131 MASTER 434 0 8 15 63 0 0 6 7600 2 114 78 END