data_9KGZ # _entry.id 9KGZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9KGZ pdb_00009kgz 10.2210/pdb9kgz/pdb WWPDB D_1300053553 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-07-02 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9KGZ _pdbx_database_status.recvd_initial_deposition_date 2024-11-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 5 _pdbx_contact_author.email hgong@tsinghua.edu.cn _pdbx_contact_author.name_first Haipeng _pdbx_contact_author.name_last Gong _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5532-1640 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, Y.' 1 0000-0002-7651-3502 'Liu, Y.' 2 0009-0004-7680-7609 'Ma, Z.' 3 0009-0003-3386-3363 'Li, M.' 4 ? 'Xu, C.' 5 0000-0002-8668-0566 'Gong, H.' 6 0000-0002-5532-1640 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of a de novo designed monomeric mainly-beta protein B10 (monoclinic)' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Y.' 1 0000-0002-7651-3502 primary 'Liu, Y.' 2 0009-0004-7680-7609 primary 'Xu, C.' 3 0000-0002-8668-0566 primary 'Gong, H.' 4 0000-0002-5532-1640 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'De novo designed monomeric mainly-beta protein B10' 14260.627 1 ? ? ? ? 2 water nat water 18.015 157 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KKIKLNIKEFKATAEGLSPEEKELWDKFAEKLKAELNNKIINLGEKIEIEEELKTPTKSIKITFSLELVSEDTFKATLKL EIKGKETIVEEETVEFKAGETVKLTIKLPDGKTFTLELKLEATKI ; _entity_poly.pdbx_seq_one_letter_code_can ;KKIKLNIKEFKATAEGLSPEEKELWDKFAEKLKAELNNKIINLGEKIEIEEELKTPTKSIKITFSLELVSEDTFKATLKL EIKGKETIVEEETVEFKAGETVKLTIKLPDGKTFTLELKLEATKI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 LYS n 1 3 ILE n 1 4 LYS n 1 5 LEU n 1 6 ASN n 1 7 ILE n 1 8 LYS n 1 9 GLU n 1 10 PHE n 1 11 LYS n 1 12 ALA n 1 13 THR n 1 14 ALA n 1 15 GLU n 1 16 GLY n 1 17 LEU n 1 18 SER n 1 19 PRO n 1 20 GLU n 1 21 GLU n 1 22 LYS n 1 23 GLU n 1 24 LEU n 1 25 TRP n 1 26 ASP n 1 27 LYS n 1 28 PHE n 1 29 ALA n 1 30 GLU n 1 31 LYS n 1 32 LEU n 1 33 LYS n 1 34 ALA n 1 35 GLU n 1 36 LEU n 1 37 ASN n 1 38 ASN n 1 39 LYS n 1 40 ILE n 1 41 ILE n 1 42 ASN n 1 43 LEU n 1 44 GLY n 1 45 GLU n 1 46 LYS n 1 47 ILE n 1 48 GLU n 1 49 ILE n 1 50 GLU n 1 51 GLU n 1 52 GLU n 1 53 LEU n 1 54 LYS n 1 55 THR n 1 56 PRO n 1 57 THR n 1 58 LYS n 1 59 SER n 1 60 ILE n 1 61 LYS n 1 62 ILE n 1 63 THR n 1 64 PHE n 1 65 SER n 1 66 LEU n 1 67 GLU n 1 68 LEU n 1 69 VAL n 1 70 SER n 1 71 GLU n 1 72 ASP n 1 73 THR n 1 74 PHE n 1 75 LYS n 1 76 ALA n 1 77 THR n 1 78 LEU n 1 79 LYS n 1 80 LEU n 1 81 GLU n 1 82 ILE n 1 83 LYS n 1 84 GLY n 1 85 LYS n 1 86 GLU n 1 87 THR n 1 88 ILE n 1 89 VAL n 1 90 GLU n 1 91 GLU n 1 92 GLU n 1 93 THR n 1 94 VAL n 1 95 GLU n 1 96 PHE n 1 97 LYS n 1 98 ALA n 1 99 GLY n 1 100 GLU n 1 101 THR n 1 102 VAL n 1 103 LYS n 1 104 LEU n 1 105 THR n 1 106 ILE n 1 107 LYS n 1 108 LEU n 1 109 PRO n 1 110 ASP n 1 111 GLY n 1 112 LYS n 1 113 THR n 1 114 PHE n 1 115 THR n 1 116 LEU n 1 117 GLU n 1 118 LEU n 1 119 LYS n 1 120 LEU n 1 121 GLU n 1 122 ALA n 1 123 THR n 1 124 LYS n 1 125 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 125 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET-29b(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 TRP 25 25 25 TRP TRP A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 PRO 109 109 109 PRO PRO A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 ILE 125 125 125 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 93 HOH HOH A . B 2 HOH 2 202 157 HOH HOH A . B 2 HOH 3 203 156 HOH HOH A . B 2 HOH 4 204 27 HOH HOH A . B 2 HOH 5 205 19 HOH HOH A . B 2 HOH 6 206 176 HOH HOH A . B 2 HOH 7 207 16 HOH HOH A . B 2 HOH 8 208 24 HOH HOH A . B 2 HOH 9 209 76 HOH HOH A . B 2 HOH 10 210 115 HOH HOH A . B 2 HOH 11 211 49 HOH HOH A . B 2 HOH 12 212 69 HOH HOH A . B 2 HOH 13 213 155 HOH HOH A . B 2 HOH 14 214 64 HOH HOH A . B 2 HOH 15 215 125 HOH HOH A . B 2 HOH 16 216 17 HOH HOH A . B 2 HOH 17 217 149 HOH HOH A . B 2 HOH 18 218 107 HOH HOH A . B 2 HOH 19 219 54 HOH HOH A . B 2 HOH 20 220 58 HOH HOH A . B 2 HOH 21 221 116 HOH HOH A . B 2 HOH 22 222 6 HOH HOH A . B 2 HOH 23 223 32 HOH HOH A . B 2 HOH 24 224 26 HOH HOH A . B 2 HOH 25 225 62 HOH HOH A . B 2 HOH 26 226 114 HOH HOH A . B 2 HOH 27 227 4 HOH HOH A . B 2 HOH 28 228 129 HOH HOH A . B 2 HOH 29 229 160 HOH HOH A . B 2 HOH 30 230 164 HOH HOH A . B 2 HOH 31 231 99 HOH HOH A . B 2 HOH 32 232 13 HOH HOH A . B 2 HOH 33 233 1 HOH HOH A . B 2 HOH 34 234 37 HOH HOH A . B 2 HOH 35 235 78 HOH HOH A . B 2 HOH 36 236 10 HOH HOH A . B 2 HOH 37 237 86 HOH HOH A . B 2 HOH 38 238 163 HOH HOH A . B 2 HOH 39 239 59 HOH HOH A . B 2 HOH 40 240 171 HOH HOH A . B 2 HOH 41 241 45 HOH HOH A . B 2 HOH 42 242 175 HOH HOH A . B 2 HOH 43 243 25 HOH HOH A . B 2 HOH 44 244 68 HOH HOH A . B 2 HOH 45 245 82 HOH HOH A . B 2 HOH 46 246 5 HOH HOH A . B 2 HOH 47 247 30 HOH HOH A . B 2 HOH 48 248 48 HOH HOH A . B 2 HOH 49 249 56 HOH HOH A . B 2 HOH 50 250 133 HOH HOH A . B 2 HOH 51 251 47 HOH HOH A . B 2 HOH 52 252 96 HOH HOH A . B 2 HOH 53 253 61 HOH HOH A . B 2 HOH 54 254 123 HOH HOH A . B 2 HOH 55 255 83 HOH HOH A . B 2 HOH 56 256 98 HOH HOH A . B 2 HOH 57 257 9 HOH HOH A . B 2 HOH 58 258 148 HOH HOH A . B 2 HOH 59 259 94 HOH HOH A . B 2 HOH 60 260 79 HOH HOH A . B 2 HOH 61 261 143 HOH HOH A . B 2 HOH 62 262 120 HOH HOH A . B 2 HOH 63 263 135 HOH HOH A . B 2 HOH 64 264 41 HOH HOH A . B 2 HOH 65 265 51 HOH HOH A . B 2 HOH 66 266 170 HOH HOH A . B 2 HOH 67 267 128 HOH HOH A . B 2 HOH 68 268 22 HOH HOH A . B 2 HOH 69 269 23 HOH HOH A . B 2 HOH 70 270 108 HOH HOH A . B 2 HOH 71 271 73 HOH HOH A . B 2 HOH 72 272 77 HOH HOH A . B 2 HOH 73 273 71 HOH HOH A . B 2 HOH 74 274 67 HOH HOH A . B 2 HOH 75 275 92 HOH HOH A . B 2 HOH 76 276 21 HOH HOH A . B 2 HOH 77 277 52 HOH HOH A . B 2 HOH 78 278 97 HOH HOH A . B 2 HOH 79 279 34 HOH HOH A . B 2 HOH 80 280 65 HOH HOH A . B 2 HOH 81 281 15 HOH HOH A . B 2 HOH 82 282 50 HOH HOH A . B 2 HOH 83 283 134 HOH HOH A . B 2 HOH 84 284 36 HOH HOH A . B 2 HOH 85 285 38 HOH HOH A . B 2 HOH 86 286 138 HOH HOH A . B 2 HOH 87 287 18 HOH HOH A . B 2 HOH 88 288 109 HOH HOH A . B 2 HOH 89 289 70 HOH HOH A . B 2 HOH 90 290 122 HOH HOH A . B 2 HOH 91 291 74 HOH HOH A . B 2 HOH 92 292 7 HOH HOH A . B 2 HOH 93 293 172 HOH HOH A . B 2 HOH 94 294 87 HOH HOH A . B 2 HOH 95 295 2 HOH HOH A . B 2 HOH 96 296 90 HOH HOH A . B 2 HOH 97 297 112 HOH HOH A . B 2 HOH 98 298 150 HOH HOH A . B 2 HOH 99 299 91 HOH HOH A . B 2 HOH 100 300 88 HOH HOH A . B 2 HOH 101 301 33 HOH HOH A . B 2 HOH 102 302 162 HOH HOH A . B 2 HOH 103 303 110 HOH HOH A . B 2 HOH 104 304 131 HOH HOH A . B 2 HOH 105 305 55 HOH HOH A . B 2 HOH 106 306 35 HOH HOH A . B 2 HOH 107 307 20 HOH HOH A . B 2 HOH 108 308 8 HOH HOH A . B 2 HOH 109 309 89 HOH HOH A . B 2 HOH 110 310 106 HOH HOH A . B 2 HOH 111 311 84 HOH HOH A . B 2 HOH 112 312 80 HOH HOH A . B 2 HOH 113 313 3 HOH HOH A . B 2 HOH 114 314 95 HOH HOH A . B 2 HOH 115 315 111 HOH HOH A . B 2 HOH 116 316 40 HOH HOH A . B 2 HOH 117 317 132 HOH HOH A . B 2 HOH 118 318 42 HOH HOH A . B 2 HOH 119 319 11 HOH HOH A . B 2 HOH 120 320 124 HOH HOH A . B 2 HOH 121 321 57 HOH HOH A . B 2 HOH 122 322 144 HOH HOH A . B 2 HOH 123 323 43 HOH HOH A . B 2 HOH 124 324 102 HOH HOH A . B 2 HOH 125 325 136 HOH HOH A . B 2 HOH 126 326 121 HOH HOH A . B 2 HOH 127 327 118 HOH HOH A . B 2 HOH 128 328 146 HOH HOH A . B 2 HOH 129 329 154 HOH HOH A . B 2 HOH 130 330 145 HOH HOH A . B 2 HOH 131 331 174 HOH HOH A . B 2 HOH 132 332 44 HOH HOH A . B 2 HOH 133 333 126 HOH HOH A . B 2 HOH 134 334 113 HOH HOH A . B 2 HOH 135 335 31 HOH HOH A . B 2 HOH 136 336 72 HOH HOH A . B 2 HOH 137 337 60 HOH HOH A . B 2 HOH 138 338 12 HOH HOH A . B 2 HOH 139 339 167 HOH HOH A . B 2 HOH 140 340 165 HOH HOH A . B 2 HOH 141 341 151 HOH HOH A . B 2 HOH 142 342 173 HOH HOH A . B 2 HOH 143 343 103 HOH HOH A . B 2 HOH 144 344 105 HOH HOH A . B 2 HOH 145 345 28 HOH HOH A . B 2 HOH 146 346 153 HOH HOH A . B 2 HOH 147 347 158 HOH HOH A . B 2 HOH 148 348 130 HOH HOH A . B 2 HOH 149 349 46 HOH HOH A . B 2 HOH 150 350 14 HOH HOH A . B 2 HOH 151 351 29 HOH HOH A . B 2 HOH 152 352 53 HOH HOH A . B 2 HOH 153 353 127 HOH HOH A . B 2 HOH 154 354 63 HOH HOH A . B 2 HOH 155 355 104 HOH HOH A . B 2 HOH 156 356 140 HOH HOH A . B 2 HOH 157 357 139 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.19.1_4122: ???)' ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . ? 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 97.96 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9KGZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 70.886 _cell.length_a_esd ? _cell.length_b 47.680 _cell.length_b_esd ? _cell.length_c 38.930 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9KGZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9KGZ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% PEG 400, 0.1M Tris, 0.2M Sodium citrate tribasic dihydrate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-08-14 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL02U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL02U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9KGZ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 28.71 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11988 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.52 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 51.09 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.0 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.865 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 11974 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 1.0 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9KGZ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.80 _refine.ls_d_res_low 28.71 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11979 _refine.ls_number_reflns_R_free 605 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.50 _refine.ls_percent_reflns_R_free 5.05 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1765 _refine.ls_R_factor_R_free 0.1995 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1753 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.47 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.95 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.18 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 28.71 _refine_hist.number_atoms_solvent 157 _refine_hist.number_atoms_total 1160 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1003 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 1018 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.950 ? 1364 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 5.859 ? 127 ? f_dihedral_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.061 ? 167 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 166 ? f_plane_restr ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.80 1.98 . . 152 2802 99.00 . . . . 0.1727 . . . . . . . . . . . . . . . 0.2360 'X-RAY DIFFRACTION' 1.98 2.27 . . 146 2854 100.00 . . . . 0.1668 . . . . . . . . . . . . . . . 0.2069 'X-RAY DIFFRACTION' 2.27 2.86 . . 165 2822 100.00 . . . . 0.1966 . . . . . . . . . . . . . . . 0.2269 'X-RAY DIFFRACTION' 2.86 28.71 . . 142 2896 99.00 . . . . 0.1687 . . . . . . . . . . . . . . . 0.1729 # _struct.entry_id 9KGZ _struct.title 'Crystal structure of a de novo designed monomeric mainly-beta protein B10 (monoclinic)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9KGZ _struct_keywords.text 'De novo protein, Mainly-beta' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9KGZ _struct_ref.pdbx_db_accession 9KGZ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9KGZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 125 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9KGZ _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 125 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 125 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 18 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ASN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 37 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 18 _struct_conf.end_auth_comp_id ASN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 37 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 40 ? ASN A 42 ? ILE A 40 ASN A 42 AA1 2 LYS A 2 ? GLU A 15 ? LYS A 2 GLU A 15 AA1 3 LYS A 112 ? ILE A 125 ? LYS A 112 ILE A 125 AA1 4 VAL A 102 ? LEU A 108 ? VAL A 102 LEU A 108 AA2 1 LYS A 46 ? LYS A 54 ? LYS A 46 LYS A 54 AA2 2 SER A 59 ? SER A 70 ? SER A 59 SER A 70 AA2 3 THR A 73 ? LYS A 83 ? THR A 73 LYS A 83 AA2 4 THR A 87 ? LYS A 97 ? THR A 87 LYS A 97 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 41 ? O ILE A 41 N ILE A 3 ? N ILE A 3 AA1 2 3 N ASN A 6 ? N ASN A 6 O GLU A 121 ? O GLU A 121 AA1 3 4 O LEU A 116 ? O LEU A 116 N LEU A 104 ? N LEU A 104 AA2 1 2 N GLU A 51 ? N GLU A 51 O ILE A 62 ? O ILE A 62 AA2 2 3 N LYS A 61 ? N LYS A 61 O GLU A 81 ? O GLU A 81 AA2 3 4 N PHE A 74 ? N PHE A 74 O PHE A 96 ? O PHE A 96 # _pdbx_entry_details.entry_id 9KGZ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 221 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 237 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 355 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 17.0058 -6.7575 2.3200 0.1122 ? 0.0060 ? -0.0370 ? 0.0788 ? -0.0041 ? 0.0927 ? 1.8269 ? 0.1068 ? -0.7701 ? 2.0377 ? -0.3267 ? 3.0319 ? -0.1978 ? -0.0878 ? -0.1200 ? -0.1126 ? -0.0185 ? -0.1901 ? 0.3818 ? 0.0580 ? 0.0870 ? 2 'X-RAY DIFFRACTION' ? refined 10.8231 -2.7474 1.5625 0.1173 ? 0.0113 ? -0.0178 ? 0.0918 ? 0.0043 ? 0.1068 ? 1.6305 ? 0.7656 ? -0.4950 ? 1.9934 ? -0.5415 ? 2.3632 ? -0.0853 ? -0.0381 ? 0.0219 ? -0.0825 ? 0.0770 ? 0.0914 ? 0.1972 ? -0.2254 ? -0.0157 ? 3 'X-RAY DIFFRACTION' ? refined 3.5448 5.2259 7.0331 0.1330 ? 0.0077 ? 0.0241 ? 0.2313 ? -0.0547 ? 0.3073 ? 2.8184 ? 0.0546 ? -2.2162 ? 0.2291 ? -0.1313 ? 2.3005 ? 0.0835 ? 0.0547 ? 0.3701 ? -0.0367 ? -0.0161 ? 0.5600 ? -0.2827 ? -0.5064 ? -0.0994 ? 4 'X-RAY DIFFRACTION' ? refined 17.3940 0.8277 8.4647 0.1002 ? -0.0060 ? -0.0196 ? 0.1128 ? -0.0060 ? 0.1111 ? 1.4322 ? 0.0832 ? -0.4131 ? 1.9134 ? 0.0405 ? 1.9555 ? -0.0208 ? -0.1541 ? 0.1056 ? 0.0934 ? 0.0477 ? -0.0710 ? 0.0103 ? 0.1112 ? -0.0102 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 18 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 19 through 45 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 46 through 58 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 59 through 125 ) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 GLU N N N N 47 GLU CA C N S 48 GLU C C N N 49 GLU O O N N 50 GLU CB C N N 51 GLU CG C N N 52 GLU CD C N N 53 GLU OE1 O N N 54 GLU OE2 O N N 55 GLU OXT O N N 56 GLU H H N N 57 GLU H2 H N N 58 GLU HA H N N 59 GLU HB2 H N N 60 GLU HB3 H N N 61 GLU HG2 H N N 62 GLU HG3 H N N 63 GLU HE2 H N N 64 GLU HXT H N N 65 GLY N N N N 66 GLY CA C N N 67 GLY C C N N 68 GLY O O N N 69 GLY OXT O N N 70 GLY H H N N 71 GLY H2 H N N 72 GLY HA2 H N N 73 GLY HA3 H N N 74 GLY HXT H N N 75 HOH O O N N 76 HOH H1 H N N 77 HOH H2 H N N 78 ILE N N N N 79 ILE CA C N S 80 ILE C C N N 81 ILE O O N N 82 ILE CB C N S 83 ILE CG1 C N N 84 ILE CG2 C N N 85 ILE CD1 C N N 86 ILE OXT O N N 87 ILE H H N N 88 ILE H2 H N N 89 ILE HA H N N 90 ILE HB H N N 91 ILE HG12 H N N 92 ILE HG13 H N N 93 ILE HG21 H N N 94 ILE HG22 H N N 95 ILE HG23 H N N 96 ILE HD11 H N N 97 ILE HD12 H N N 98 ILE HD13 H N N 99 ILE HXT H N N 100 LEU N N N N 101 LEU CA C N S 102 LEU C C N N 103 LEU O O N N 104 LEU CB C N N 105 LEU CG C N N 106 LEU CD1 C N N 107 LEU CD2 C N N 108 LEU OXT O N N 109 LEU H H N N 110 LEU H2 H N N 111 LEU HA H N N 112 LEU HB2 H N N 113 LEU HB3 H N N 114 LEU HG H N N 115 LEU HD11 H N N 116 LEU HD12 H N N 117 LEU HD13 H N N 118 LEU HD21 H N N 119 LEU HD22 H N N 120 LEU HD23 H N N 121 LEU HXT H N N 122 LYS N N N N 123 LYS CA C N S 124 LYS C C N N 125 LYS O O N N 126 LYS CB C N N 127 LYS CG C N N 128 LYS CD C N N 129 LYS CE C N N 130 LYS NZ N N N 131 LYS OXT O N N 132 LYS H H N N 133 LYS H2 H N N 134 LYS HA H N N 135 LYS HB2 H N N 136 LYS HB3 H N N 137 LYS HG2 H N N 138 LYS HG3 H N N 139 LYS HD2 H N N 140 LYS HD3 H N N 141 LYS HE2 H N N 142 LYS HE3 H N N 143 LYS HZ1 H N N 144 LYS HZ2 H N N 145 LYS HZ3 H N N 146 LYS HXT H N N 147 PHE N N N N 148 PHE CA C N S 149 PHE C C N N 150 PHE O O N N 151 PHE CB C N N 152 PHE CG C Y N 153 PHE CD1 C Y N 154 PHE CD2 C Y N 155 PHE CE1 C Y N 156 PHE CE2 C Y N 157 PHE CZ C Y N 158 PHE OXT O N N 159 PHE H H N N 160 PHE H2 H N N 161 PHE HA H N N 162 PHE HB2 H N N 163 PHE HB3 H N N 164 PHE HD1 H N N 165 PHE HD2 H N N 166 PHE HE1 H N N 167 PHE HE2 H N N 168 PHE HZ H N N 169 PHE HXT H N N 170 PRO N N N N 171 PRO CA C N S 172 PRO C C N N 173 PRO O O N N 174 PRO CB C N N 175 PRO CG C N N 176 PRO CD C N N 177 PRO OXT O N N 178 PRO H H N N 179 PRO HA H N N 180 PRO HB2 H N N 181 PRO HB3 H N N 182 PRO HG2 H N N 183 PRO HG3 H N N 184 PRO HD2 H N N 185 PRO HD3 H N N 186 PRO HXT H N N 187 SER N N N N 188 SER CA C N S 189 SER C C N N 190 SER O O N N 191 SER CB C N N 192 SER OG O N N 193 SER OXT O N N 194 SER H H N N 195 SER H2 H N N 196 SER HA H N N 197 SER HB2 H N N 198 SER HB3 H N N 199 SER HG H N N 200 SER HXT H N N 201 THR N N N N 202 THR CA C N S 203 THR C C N N 204 THR O O N N 205 THR CB C N R 206 THR OG1 O N N 207 THR CG2 C N N 208 THR OXT O N N 209 THR H H N N 210 THR H2 H N N 211 THR HA H N N 212 THR HB H N N 213 THR HG1 H N N 214 THR HG21 H N N 215 THR HG22 H N N 216 THR HG23 H N N 217 THR HXT H N N 218 TRP N N N N 219 TRP CA C N S 220 TRP C C N N 221 TRP O O N N 222 TRP CB C N N 223 TRP CG C Y N 224 TRP CD1 C Y N 225 TRP CD2 C Y N 226 TRP NE1 N Y N 227 TRP CE2 C Y N 228 TRP CE3 C Y N 229 TRP CZ2 C Y N 230 TRP CZ3 C Y N 231 TRP CH2 C Y N 232 TRP OXT O N N 233 TRP H H N N 234 TRP H2 H N N 235 TRP HA H N N 236 TRP HB2 H N N 237 TRP HB3 H N N 238 TRP HD1 H N N 239 TRP HE1 H N N 240 TRP HE3 H N N 241 TRP HZ2 H N N 242 TRP HZ3 H N N 243 TRP HH2 H N N 244 TRP HXT H N N 245 VAL N N N N 246 VAL CA C N S 247 VAL C C N N 248 VAL O O N N 249 VAL CB C N N 250 VAL CG1 C N N 251 VAL CG2 C N N 252 VAL OXT O N N 253 VAL H H N N 254 VAL H2 H N N 255 VAL HA H N N 256 VAL HB H N N 257 VAL HG11 H N N 258 VAL HG12 H N N 259 VAL HG13 H N N 260 VAL HG21 H N N 261 VAL HG22 H N N 262 VAL HG23 H N N 263 VAL HXT H N N 264 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 GLU N CA sing N N 44 GLU N H sing N N 45 GLU N H2 sing N N 46 GLU CA C sing N N 47 GLU CA CB sing N N 48 GLU CA HA sing N N 49 GLU C O doub N N 50 GLU C OXT sing N N 51 GLU CB CG sing N N 52 GLU CB HB2 sing N N 53 GLU CB HB3 sing N N 54 GLU CG CD sing N N 55 GLU CG HG2 sing N N 56 GLU CG HG3 sing N N 57 GLU CD OE1 doub N N 58 GLU CD OE2 sing N N 59 GLU OE2 HE2 sing N N 60 GLU OXT HXT sing N N 61 GLY N CA sing N N 62 GLY N H sing N N 63 GLY N H2 sing N N 64 GLY CA C sing N N 65 GLY CA HA2 sing N N 66 GLY CA HA3 sing N N 67 GLY C O doub N N 68 GLY C OXT sing N N 69 GLY OXT HXT sing N N 70 HOH O H1 sing N N 71 HOH O H2 sing N N 72 ILE N CA sing N N 73 ILE N H sing N N 74 ILE N H2 sing N N 75 ILE CA C sing N N 76 ILE CA CB sing N N 77 ILE CA HA sing N N 78 ILE C O doub N N 79 ILE C OXT sing N N 80 ILE CB CG1 sing N N 81 ILE CB CG2 sing N N 82 ILE CB HB sing N N 83 ILE CG1 CD1 sing N N 84 ILE CG1 HG12 sing N N 85 ILE CG1 HG13 sing N N 86 ILE CG2 HG21 sing N N 87 ILE CG2 HG22 sing N N 88 ILE CG2 HG23 sing N N 89 ILE CD1 HD11 sing N N 90 ILE CD1 HD12 sing N N 91 ILE CD1 HD13 sing N N 92 ILE OXT HXT sing N N 93 LEU N CA sing N N 94 LEU N H sing N N 95 LEU N H2 sing N N 96 LEU CA C sing N N 97 LEU CA CB sing N N 98 LEU CA HA sing N N 99 LEU C O doub N N 100 LEU C OXT sing N N 101 LEU CB CG sing N N 102 LEU CB HB2 sing N N 103 LEU CB HB3 sing N N 104 LEU CG CD1 sing N N 105 LEU CG CD2 sing N N 106 LEU CG HG sing N N 107 LEU CD1 HD11 sing N N 108 LEU CD1 HD12 sing N N 109 LEU CD1 HD13 sing N N 110 LEU CD2 HD21 sing N N 111 LEU CD2 HD22 sing N N 112 LEU CD2 HD23 sing N N 113 LEU OXT HXT sing N N 114 LYS N CA sing N N 115 LYS N H sing N N 116 LYS N H2 sing N N 117 LYS CA C sing N N 118 LYS CA CB sing N N 119 LYS CA HA sing N N 120 LYS C O doub N N 121 LYS C OXT sing N N 122 LYS CB CG sing N N 123 LYS CB HB2 sing N N 124 LYS CB HB3 sing N N 125 LYS CG CD sing N N 126 LYS CG HG2 sing N N 127 LYS CG HG3 sing N N 128 LYS CD CE sing N N 129 LYS CD HD2 sing N N 130 LYS CD HD3 sing N N 131 LYS CE NZ sing N N 132 LYS CE HE2 sing N N 133 LYS CE HE3 sing N N 134 LYS NZ HZ1 sing N N 135 LYS NZ HZ2 sing N N 136 LYS NZ HZ3 sing N N 137 LYS OXT HXT sing N N 138 PHE N CA sing N N 139 PHE N H sing N N 140 PHE N H2 sing N N 141 PHE CA C sing N N 142 PHE CA CB sing N N 143 PHE CA HA sing N N 144 PHE C O doub N N 145 PHE C OXT sing N N 146 PHE CB CG sing N N 147 PHE CB HB2 sing N N 148 PHE CB HB3 sing N N 149 PHE CG CD1 doub Y N 150 PHE CG CD2 sing Y N 151 PHE CD1 CE1 sing Y N 152 PHE CD1 HD1 sing N N 153 PHE CD2 CE2 doub Y N 154 PHE CD2 HD2 sing N N 155 PHE CE1 CZ doub Y N 156 PHE CE1 HE1 sing N N 157 PHE CE2 CZ sing Y N 158 PHE CE2 HE2 sing N N 159 PHE CZ HZ sing N N 160 PHE OXT HXT sing N N 161 PRO N CA sing N N 162 PRO N CD sing N N 163 PRO N H sing N N 164 PRO CA C sing N N 165 PRO CA CB sing N N 166 PRO CA HA sing N N 167 PRO C O doub N N 168 PRO C OXT sing N N 169 PRO CB CG sing N N 170 PRO CB HB2 sing N N 171 PRO CB HB3 sing N N 172 PRO CG CD sing N N 173 PRO CG HG2 sing N N 174 PRO CG HG3 sing N N 175 PRO CD HD2 sing N N 176 PRO CD HD3 sing N N 177 PRO OXT HXT sing N N 178 SER N CA sing N N 179 SER N H sing N N 180 SER N H2 sing N N 181 SER CA C sing N N 182 SER CA CB sing N N 183 SER CA HA sing N N 184 SER C O doub N N 185 SER C OXT sing N N 186 SER CB OG sing N N 187 SER CB HB2 sing N N 188 SER CB HB3 sing N N 189 SER OG HG sing N N 190 SER OXT HXT sing N N 191 THR N CA sing N N 192 THR N H sing N N 193 THR N H2 sing N N 194 THR CA C sing N N 195 THR CA CB sing N N 196 THR CA HA sing N N 197 THR C O doub N N 198 THR C OXT sing N N 199 THR CB OG1 sing N N 200 THR CB CG2 sing N N 201 THR CB HB sing N N 202 THR OG1 HG1 sing N N 203 THR CG2 HG21 sing N N 204 THR CG2 HG22 sing N N 205 THR CG2 HG23 sing N N 206 THR OXT HXT sing N N 207 TRP N CA sing N N 208 TRP N H sing N N 209 TRP N H2 sing N N 210 TRP CA C sing N N 211 TRP CA CB sing N N 212 TRP CA HA sing N N 213 TRP C O doub N N 214 TRP C OXT sing N N 215 TRP CB CG sing N N 216 TRP CB HB2 sing N N 217 TRP CB HB3 sing N N 218 TRP CG CD1 doub Y N 219 TRP CG CD2 sing Y N 220 TRP CD1 NE1 sing Y N 221 TRP CD1 HD1 sing N N 222 TRP CD2 CE2 doub Y N 223 TRP CD2 CE3 sing Y N 224 TRP NE1 CE2 sing Y N 225 TRP NE1 HE1 sing N N 226 TRP CE2 CZ2 sing Y N 227 TRP CE3 CZ3 doub Y N 228 TRP CE3 HE3 sing N N 229 TRP CZ2 CH2 doub Y N 230 TRP CZ2 HZ2 sing N N 231 TRP CZ3 CH2 sing Y N 232 TRP CZ3 HZ3 sing N N 233 TRP CH2 HH2 sing N N 234 TRP OXT HXT sing N N 235 VAL N CA sing N N 236 VAL N H sing N N 237 VAL N H2 sing N N 238 VAL CA C sing N N 239 VAL CA CB sing N N 240 VAL CA HA sing N N 241 VAL C O doub N N 242 VAL C OXT sing N N 243 VAL CB CG1 sing N N 244 VAL CB CG2 sing N N 245 VAL CB HB sing N N 246 VAL CG1 HG11 sing N N 247 VAL CG1 HG12 sing N N 248 VAL CG1 HG13 sing N N 249 VAL CG2 HG21 sing N N 250 VAL CG2 HG22 sing N N 251 VAL CG2 HG23 sing N N 252 VAL OXT HXT sing N N 253 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Ministry of Science and Technology (MoST, China)' China 2023YFF1204400 1 'National Natural Science Foundation of China (NSFC)' China 32171243 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9KGZ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.014107 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001972 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020973 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025937 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O # loop_ # loop_ #