data_9KK0 # _entry.id 9KK0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9KK0 pdb_00009kk0 10.2210/pdb9kk0/pdb WWPDB D_1300051039 ? ? BMRB 36711 ? 10.13018/BMR36711 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 9KK0 _pdbx_database_status.recvd_initial_deposition_date 2024-11-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structure of kappa-conotoxin RIIIJ' _pdbx_database_related.db_id 36711 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 3 _pdbx_contact_author.email olivera@biology.utah.edu _pdbx_contact_author.name_first Olivera _pdbx_contact_author.name_last Baldomero _pdbx_contact_author.name_mi M. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4556-1410 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lushpa, V.A.' 1 0000-0002-1788-1153 'Vassilevski, A.A.' 2 0000-0002-1359-0076 'Bocharov, E.V.' 3 0000-0002-3635-1609 'Olivera, B.M.' 4 0000-0003-4556-1410 'Rivier, J.E.' 5 ? 'Raghuraman, S.' 6 0000-0001-5625-4454 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Solution structure of kappa-conotoxin RIIIJ' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lushpa, V.A.' 1 0000-0002-1788-1153 primary 'Vassilevski, A.A.' 2 0000-0002-1359-0076 primary 'Bocharov, E.V.' 3 0000-0002-3635-1609 primary 'Olivera, B.M.' 4 0000-0003-4556-1410 primary 'Rivier, J.E.' 5 ? primary 'Raghuraman, S.' 6 0000-0001-5625-4454 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Kappa-conotoxin RIIIJ' _entity.formula_weight 2819.390 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name Kappa-M-RIIIJ # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'L(HYP)(HYP)CCT(HYP)(HYP)KKHC(HYP)A(HYP)ACKYK(HYP)CCKS' _entity_poly.pdbx_seq_one_letter_code_can LPPCCTPPKKHCPAPACKYKPCCKS _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 HYP n 1 3 HYP n 1 4 CYS n 1 5 CYS n 1 6 THR n 1 7 HYP n 1 8 HYP n 1 9 LYS n 1 10 LYS n 1 11 HIS n 1 12 CYS n 1 13 HYP n 1 14 ALA n 1 15 HYP n 1 16 ALA n 1 17 CYS n 1 18 LYS n 1 19 TYR n 1 20 LYS n 1 21 HYP n 1 22 CYS n 1 23 CYS n 1 24 LYS n 1 25 SER n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 25 _pdbx_entity_src_syn.organism_scientific 'Conus radiatus' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 61198 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 1 LEU LEU A . n A 1 2 HYP 2 2 2 HYP HYP A . n A 1 3 HYP 3 3 3 HYP HYP A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 HYP 7 7 7 HYP HYP A . n A 1 8 HYP 8 8 8 HYP HYP A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 CYS 12 12 12 CYS CYS A . n A 1 13 HYP 13 13 13 HYP HYP A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 HYP 15 15 15 HYP HYP A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 HYP 21 21 21 HYP HYP A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 CYS 23 23 23 CYS CYS A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 SER 25 25 25 SER SER A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id HYP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id HYP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9KK0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.000 _cell.length_a_esd ? _cell.length_b 1.000 _cell.length_b_esd ? _cell.length_c 1.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9KK0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9KK0 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _database_PDB_matrix.entry_id 9KK0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 9KK0 _struct.title 'Solution structure of kappa-conotoxin RIIIJ' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9KK0 _struct_keywords.text 'kappa-conotoxin, protein, TOXIN' _struct_keywords.pdbx_keywords TOXIN # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CM3J_CONRA _struct_ref.pdbx_db_accession P0CG45 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code LPPCCTPPKKHCPAPACKYKPCCKS _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9KK0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 25 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0CG45 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 25 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 25 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 14 ? LYS A 18 ? ALA A 14 LYS A 18 5 ? 5 HELX_P HELX_P2 AA2 LYS A 20 ? SER A 25 ? LYS A 20 SER A 25 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 17 SG ? ? A CYS 4 A CYS 17 1_555 ? ? ? ? ? ? ? 1.980 ? ? disulf2 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 22 SG ? ? A CYS 5 A CYS 22 1_555 ? ? ? ? ? ? ? 1.974 ? ? disulf3 disulf ? ? A CYS 12 SG ? ? ? 1_555 A CYS 23 SG ? ? A CYS 12 A CYS 23 1_555 ? ? ? ? ? ? ? 1.991 ? ? covale1 covale both ? A LEU 1 C ? ? ? 1_555 A HYP 2 N ? ? A LEU 1 A HYP 2 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale2 covale both ? A HYP 2 C ? ? ? 1_555 A HYP 3 N ? ? A HYP 2 A HYP 3 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale3 covale both ? A HYP 3 C ? ? ? 1_555 A CYS 4 N ? ? A HYP 3 A CYS 4 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A THR 6 C ? ? ? 1_555 A HYP 7 N ? ? A THR 6 A HYP 7 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale5 covale both ? A HYP 7 C ? ? ? 1_555 A HYP 8 N ? ? A HYP 7 A HYP 8 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale6 covale both ? A HYP 8 C ? ? ? 1_555 A LYS 9 N ? ? A HYP 8 A LYS 9 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A CYS 12 C ? ? ? 1_555 A HYP 13 N ? ? A CYS 12 A HYP 13 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale8 covale both ? A HYP 13 C ? ? ? 1_555 A ALA 14 N ? ? A HYP 13 A ALA 14 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale both ? A ALA 14 C ? ? ? 1_555 A HYP 15 N ? ? A ALA 14 A HYP 15 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale10 covale both ? A HYP 15 C ? ? ? 1_555 A ALA 16 N ? ? A HYP 15 A ALA 16 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale11 covale both ? A LYS 20 C ? ? ? 1_555 A HYP 21 N ? ? A LYS 20 A HYP 21 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale12 covale both ? A HYP 21 C ? ? ? 1_555 A CYS 22 N ? ? A HYP 21 A CYS 22 1_555 ? ? ? ? ? ? ? 1.329 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 HYP A 2 ? . . . . HYP A 2 ? 1_555 . . . . . . . PRO 1 HYP Hydroxylation 'Named protein modification' 2 HYP A 3 ? . . . . HYP A 3 ? 1_555 . . . . . . . PRO 1 HYP Hydroxylation 'Named protein modification' 3 HYP A 7 ? . . . . HYP A 7 ? 1_555 . . . . . . . PRO 1 HYP Hydroxylation 'Named protein modification' 4 HYP A 8 ? . . . . HYP A 8 ? 1_555 . . . . . . . PRO 1 HYP Hydroxylation 'Named protein modification' 5 HYP A 13 ? . . . . HYP A 13 ? 1_555 . . . . . . . PRO 1 HYP Hydroxylation 'Named protein modification' 6 HYP A 15 ? . . . . HYP A 15 ? 1_555 . . . . . . . PRO 1 HYP Hydroxylation 'Named protein modification' 7 HYP A 21 ? . . . . HYP A 21 ? 1_555 . . . . . . . PRO 1 HYP Hydroxylation 'Named protein modification' 8 CYS A 4 ? CYS A 17 ? CYS A 4 ? 1_555 CYS A 17 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS A 5 ? CYS A 22 ? CYS A 5 ? 1_555 CYS A 22 ? 1_555 SG SG . . . None 'Disulfide bridge' 10 CYS A 12 ? CYS A 23 ? CYS A 12 ? 1_555 CYS A 23 ? 1_555 SG SG . . . None 'Disulfide bridge' # _pdbx_entry_details.entry_id 9KK0 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HYP A 3 ? ? -35.66 99.17 2 1 CYS A 17 ? ? -106.01 42.79 3 1 TYR A 19 ? ? -94.68 32.38 4 2 HYP A 3 ? ? -35.54 115.25 5 2 THR A 6 ? ? -46.98 157.62 6 2 CYS A 12 ? ? -118.96 65.86 7 2 CYS A 17 ? ? -118.07 69.07 8 2 TYR A 19 ? ? -93.38 30.60 9 3 HYP A 3 ? ? -40.15 108.26 10 3 THR A 6 ? ? -44.84 158.10 11 3 CYS A 12 ? ? -118.05 66.80 12 3 CYS A 17 ? ? -115.16 63.94 13 4 HYP A 3 ? ? -35.71 115.77 14 4 HIS A 11 ? ? -171.62 146.03 15 4 CYS A 17 ? ? -108.09 49.71 16 4 TYR A 19 ? ? -92.68 30.88 17 5 HYP A 3 ? ? -35.92 118.24 18 5 CYS A 4 ? ? -91.48 39.51 19 5 CYS A 5 ? ? -134.98 -48.54 20 6 HYP A 3 ? ? -35.17 109.39 21 6 CYS A 17 ? ? -106.88 42.74 22 6 TYR A 19 ? ? -92.41 33.40 23 6 LYS A 24 ? ? -154.35 83.74 24 7 HYP A 3 ? ? -35.76 98.80 25 7 CYS A 12 ? ? -116.67 64.80 26 7 TYR A 19 ? ? -94.42 31.68 27 8 HYP A 3 ? ? -35.41 101.79 28 8 THR A 6 ? ? -47.39 156.88 29 8 LYS A 9 ? ? 36.34 46.90 30 8 CYS A 12 ? ? -118.41 64.95 31 8 TYR A 19 ? ? -92.29 35.13 32 9 HYP A 3 ? ? -43.21 104.27 33 9 THR A 6 ? ? -44.56 162.35 34 9 HYP A 7 ? ? -29.25 -48.18 35 9 LYS A 9 ? ? 69.67 -68.42 36 9 CYS A 12 ? ? -119.10 64.00 37 10 HYP A 3 ? ? -34.89 117.56 38 10 HYP A 7 ? ? -29.37 -47.91 39 10 HIS A 11 ? ? 178.44 146.13 40 10 CYS A 12 ? ? -117.80 66.87 41 10 CYS A 17 ? ? -118.47 57.66 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A HYP 2 A HYP 2 ? PRO 'modified residue' 2 A HYP 3 A HYP 3 ? PRO 'modified residue' 3 A HYP 7 A HYP 7 ? PRO 'modified residue' 4 A HYP 8 A HYP 8 ? PRO 'modified residue' 5 A HYP 13 A HYP 13 ? PRO 'modified residue' 6 A HYP 15 A HYP 15 ? PRO 'modified residue' 7 A HYP 21 A HYP 21 ? PRO 'modified residue' # _pdbx_nmr_ensemble.entry_id 9KK0 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 9KK0 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'target function' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '95 % H2O, 5 % D-99.8% D2O, 0.001 % sodium azide, 95% H2O/5% D2O' '95% H2O/5% D2O' 'natural abundance' solution ? 2 '100 % D-99.8% D2O, 0.001 % sodium azide, 100% D2O' '100% D2O' 'natural abundance' solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 H2O 95 ? % 'natural abundance' 1 D2O 5 ? % D-99.8% 1 'sodium azide' 0.001 ? % 'natural abundance' 2 D2O 100 ? % D-99.8% 2 'sodium azide' 0.001 ? % 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pH 3.95 _pdbx_nmr_exptl_sample_conditions.ionic_strength Null _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label 1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '2D 1H-1H TOCSY' 1 isotropic 3 1 1 '2D 1H-13C HSQC aliphatic' 1 isotropic 4 1 1 '2D 1H-13C HSQC aromatic' 1 isotropic 5 1 2 '2D 1H-1H NOESY' 1 isotropic 6 1 2 '2D 1H-1H TOCSY' 1 isotropic 7 1 2 '2D 1H-1H COSY' 1 isotropic 8 1 2 '2D 1H-13C HSQC aliphatic' 1 isotropic # _pdbx_nmr_refine.entry_id 9KK0 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CYANA 3.98.13 'Guntert, Mumenthaler and Wuthrich' 2 'structure calculation' CYANA 3.98.13 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' CARA 1.9.1.7 'Keller and Wuthrich' 4 collection TopSpin 3.4 'Bruker Biospin' 5 'peak picking' CARA 1.9.1.7 'Keller and Wuthrich' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 CYS N N N N 14 CYS CA C N R 15 CYS C C N N 16 CYS O O N N 17 CYS CB C N N 18 CYS SG S N N 19 CYS OXT O N N 20 CYS H H N N 21 CYS H2 H N N 22 CYS HA H N N 23 CYS HB2 H N N 24 CYS HB3 H N N 25 CYS HG H N N 26 CYS HXT H N N 27 HIS N N N N 28 HIS CA C N S 29 HIS C C N N 30 HIS O O N N 31 HIS CB C N N 32 HIS CG C Y N 33 HIS ND1 N Y N 34 HIS CD2 C Y N 35 HIS CE1 C Y N 36 HIS NE2 N Y N 37 HIS OXT O N N 38 HIS H H N N 39 HIS H2 H N N 40 HIS HA H N N 41 HIS HB2 H N N 42 HIS HB3 H N N 43 HIS HD1 H N N 44 HIS HD2 H N N 45 HIS HE1 H N N 46 HIS HE2 H N N 47 HIS HXT H N N 48 HYP N N N N 49 HYP CA C N S 50 HYP C C N N 51 HYP O O N N 52 HYP CB C N N 53 HYP CG C N R 54 HYP CD C N N 55 HYP OD1 O N N 56 HYP OXT O N N 57 HYP H H N N 58 HYP HA H N N 59 HYP HB2 H N N 60 HYP HB3 H N N 61 HYP HG H N N 62 HYP HD22 H N N 63 HYP HD23 H N N 64 HYP HD1 H N N 65 HYP HXT H N N 66 LEU N N N N 67 LEU CA C N S 68 LEU C C N N 69 LEU O O N N 70 LEU CB C N N 71 LEU CG C N N 72 LEU CD1 C N N 73 LEU CD2 C N N 74 LEU OXT O N N 75 LEU H H N N 76 LEU H2 H N N 77 LEU HA H N N 78 LEU HB2 H N N 79 LEU HB3 H N N 80 LEU HG H N N 81 LEU HD11 H N N 82 LEU HD12 H N N 83 LEU HD13 H N N 84 LEU HD21 H N N 85 LEU HD22 H N N 86 LEU HD23 H N N 87 LEU HXT H N N 88 LYS N N N N 89 LYS CA C N S 90 LYS C C N N 91 LYS O O N N 92 LYS CB C N N 93 LYS CG C N N 94 LYS CD C N N 95 LYS CE C N N 96 LYS NZ N N N 97 LYS OXT O N N 98 LYS H H N N 99 LYS H2 H N N 100 LYS HA H N N 101 LYS HB2 H N N 102 LYS HB3 H N N 103 LYS HG2 H N N 104 LYS HG3 H N N 105 LYS HD2 H N N 106 LYS HD3 H N N 107 LYS HE2 H N N 108 LYS HE3 H N N 109 LYS HZ1 H N N 110 LYS HZ2 H N N 111 LYS HZ3 H N N 112 LYS HXT H N N 113 SER N N N N 114 SER CA C N S 115 SER C C N N 116 SER O O N N 117 SER CB C N N 118 SER OG O N N 119 SER OXT O N N 120 SER H H N N 121 SER H2 H N N 122 SER HA H N N 123 SER HB2 H N N 124 SER HB3 H N N 125 SER HG H N N 126 SER HXT H N N 127 THR N N N N 128 THR CA C N S 129 THR C C N N 130 THR O O N N 131 THR CB C N R 132 THR OG1 O N N 133 THR CG2 C N N 134 THR OXT O N N 135 THR H H N N 136 THR H2 H N N 137 THR HA H N N 138 THR HB H N N 139 THR HG1 H N N 140 THR HG21 H N N 141 THR HG22 H N N 142 THR HG23 H N N 143 THR HXT H N N 144 TYR N N N N 145 TYR CA C N S 146 TYR C C N N 147 TYR O O N N 148 TYR CB C N N 149 TYR CG C Y N 150 TYR CD1 C Y N 151 TYR CD2 C Y N 152 TYR CE1 C Y N 153 TYR CE2 C Y N 154 TYR CZ C Y N 155 TYR OH O N N 156 TYR OXT O N N 157 TYR H H N N 158 TYR H2 H N N 159 TYR HA H N N 160 TYR HB2 H N N 161 TYR HB3 H N N 162 TYR HD1 H N N 163 TYR HD2 H N N 164 TYR HE1 H N N 165 TYR HE2 H N N 166 TYR HH H N N 167 TYR HXT H N N 168 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 CYS N CA sing N N 13 CYS N H sing N N 14 CYS N H2 sing N N 15 CYS CA C sing N N 16 CYS CA CB sing N N 17 CYS CA HA sing N N 18 CYS C O doub N N 19 CYS C OXT sing N N 20 CYS CB SG sing N N 21 CYS CB HB2 sing N N 22 CYS CB HB3 sing N N 23 CYS SG HG sing N N 24 CYS OXT HXT sing N N 25 HIS N CA sing N N 26 HIS N H sing N N 27 HIS N H2 sing N N 28 HIS CA C sing N N 29 HIS CA CB sing N N 30 HIS CA HA sing N N 31 HIS C O doub N N 32 HIS C OXT sing N N 33 HIS CB CG sing N N 34 HIS CB HB2 sing N N 35 HIS CB HB3 sing N N 36 HIS CG ND1 sing Y N 37 HIS CG CD2 doub Y N 38 HIS ND1 CE1 doub Y N 39 HIS ND1 HD1 sing N N 40 HIS CD2 NE2 sing Y N 41 HIS CD2 HD2 sing N N 42 HIS CE1 NE2 sing Y N 43 HIS CE1 HE1 sing N N 44 HIS NE2 HE2 sing N N 45 HIS OXT HXT sing N N 46 HYP N CA sing N N 47 HYP N CD sing N N 48 HYP N H sing N N 49 HYP CA C sing N N 50 HYP CA CB sing N N 51 HYP CA HA sing N N 52 HYP C O doub N N 53 HYP C OXT sing N N 54 HYP CB CG sing N N 55 HYP CB HB2 sing N N 56 HYP CB HB3 sing N N 57 HYP CG CD sing N N 58 HYP CG OD1 sing N N 59 HYP CG HG sing N N 60 HYP CD HD22 sing N N 61 HYP CD HD23 sing N N 62 HYP OD1 HD1 sing N N 63 HYP OXT HXT sing N N 64 LEU N CA sing N N 65 LEU N H sing N N 66 LEU N H2 sing N N 67 LEU CA C sing N N 68 LEU CA CB sing N N 69 LEU CA HA sing N N 70 LEU C O doub N N 71 LEU C OXT sing N N 72 LEU CB CG sing N N 73 LEU CB HB2 sing N N 74 LEU CB HB3 sing N N 75 LEU CG CD1 sing N N 76 LEU CG CD2 sing N N 77 LEU CG HG sing N N 78 LEU CD1 HD11 sing N N 79 LEU CD1 HD12 sing N N 80 LEU CD1 HD13 sing N N 81 LEU CD2 HD21 sing N N 82 LEU CD2 HD22 sing N N 83 LEU CD2 HD23 sing N N 84 LEU OXT HXT sing N N 85 LYS N CA sing N N 86 LYS N H sing N N 87 LYS N H2 sing N N 88 LYS CA C sing N N 89 LYS CA CB sing N N 90 LYS CA HA sing N N 91 LYS C O doub N N 92 LYS C OXT sing N N 93 LYS CB CG sing N N 94 LYS CB HB2 sing N N 95 LYS CB HB3 sing N N 96 LYS CG CD sing N N 97 LYS CG HG2 sing N N 98 LYS CG HG3 sing N N 99 LYS CD CE sing N N 100 LYS CD HD2 sing N N 101 LYS CD HD3 sing N N 102 LYS CE NZ sing N N 103 LYS CE HE2 sing N N 104 LYS CE HE3 sing N N 105 LYS NZ HZ1 sing N N 106 LYS NZ HZ2 sing N N 107 LYS NZ HZ3 sing N N 108 LYS OXT HXT sing N N 109 SER N CA sing N N 110 SER N H sing N N 111 SER N H2 sing N N 112 SER CA C sing N N 113 SER CA CB sing N N 114 SER CA HA sing N N 115 SER C O doub N N 116 SER C OXT sing N N 117 SER CB OG sing N N 118 SER CB HB2 sing N N 119 SER CB HB3 sing N N 120 SER OG HG sing N N 121 SER OXT HXT sing N N 122 THR N CA sing N N 123 THR N H sing N N 124 THR N H2 sing N N 125 THR CA C sing N N 126 THR CA CB sing N N 127 THR CA HA sing N N 128 THR C O doub N N 129 THR C OXT sing N N 130 THR CB OG1 sing N N 131 THR CB CG2 sing N N 132 THR CB HB sing N N 133 THR OG1 HG1 sing N N 134 THR CG2 HG21 sing N N 135 THR CG2 HG22 sing N N 136 THR CG2 HG23 sing N N 137 THR OXT HXT sing N N 138 TYR N CA sing N N 139 TYR N H sing N N 140 TYR N H2 sing N N 141 TYR CA C sing N N 142 TYR CA CB sing N N 143 TYR CA HA sing N N 144 TYR C O doub N N 145 TYR C OXT sing N N 146 TYR CB CG sing N N 147 TYR CB HB2 sing N N 148 TYR CB HB3 sing N N 149 TYR CG CD1 doub Y N 150 TYR CG CD2 sing Y N 151 TYR CD1 CE1 sing Y N 152 TYR CD1 HD1 sing N N 153 TYR CD2 CE2 doub Y N 154 TYR CD2 HD2 sing N N 155 TYR CE1 CZ doub Y N 156 TYR CE1 HE1 sing N N 157 TYR CE2 CZ sing Y N 158 TYR CE2 HE2 sing N N 159 TYR CZ OH sing N N 160 TYR OH HH sing N N 161 TYR OXT HXT sing N N 162 # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 9KK0 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #