data_9KKJ # _entry.id 9KKJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9KKJ pdb_00009kkj 10.2210/pdb9kkj/pdb WWPDB D_1300048355 ? ? EMDB EMD-62389 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-11-19 ? 2 'Structure model' 1 1 2025-11-26 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9KKJ _pdbx_database_status.recvd_initial_deposition_date 2024-11-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Structure of Nectin-4 D1 domain in complex with the Fab fragment of 9MW2821 mAb' _pdbx_database_related.db_id EMD-62389 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email pengfang@t-mab.com _pdbx_contact_author.name_first Peng _pdbx_contact_author.name_last FANG _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0009-0000-3185-0495 # _audit_author.name 'Wen, H.Y.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 301 _citation.language ? _citation.page_first 110816 _citation.page_last 110816 _citation.title 'Structural basis of nectin-4 recognition by the antibody-drug conjugate 9MW2821.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.jbc.2025.110816 _citation.pdbx_database_id_PubMed 41101504 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fang, P.' 1 ? primary 'You, M.' 2 ? primary 'Wen, H.' 3 ? primary 'Cao, Y.' 4 ? primary 'Zhou, W.' 5 ? primary 'Zhu, X.' 6 ? primary 'Shi, L.' 7 ? primary 'Sun, X.' 8 ? primary 'Li, K.' 9 ? primary 'Li, W.' 10 ? primary 'Wang, J.' 11 ? primary 'Wu, H.' 12 ? primary 'Tan, X.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '9MW2821 mAb Fab Light chain' 23965.576 1 ? ? ? ? 2 polymer man '9MW2821 mAb Fab Heavy Chain' 23235.301 1 ? ? ? ? 3 polymer man Nectin-4 12363.739 1 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Ig superfamily receptor LNIR,Nectin cell adhesion molecule 4,Poliovirus receptor-related protein 4' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DIVMTQSPDSLAVSLGERATINCKSSQSLLNTYSQKNYLAWYQQKPGQPPKLLIYFASTRESGVPDRFSGSGSGTDFTLT ISSLQAEDVAVYYCQQHYNTPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG ; ;DIVMTQSPDSLAVSLGERATINCKSSQSLLNTYSQKNYLAWYQQKPGQPPKLLIYFASTRESGVPDRFSGSGSGTDFTLT ISSLQAEDVAVYYCQQHYNTPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG ; L ? 2 'polypeptide(L)' no no ;EVQLQESGPGLVKPSETLSLTCTVSGFSLIDYGVSWIRQPPGKGLEWIGVIWGGGKIYYNSVLKSRVTISKDNSKSQVSL KLSSVTAADTAVYYCAKQGGLLFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK ; ;EVQLQESGPGLVKPSETLSLTCTVSGFSLIDYGVSWIRQPPGKGLEWIGVIWGGGKIYYNSVLKSRVTISKDNSKSQVSL KLSSVTAADTAVYYCAKQGGLLFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK ; H ? 3 'polypeptide(L)' no no ;GELETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGS VLLRNAVQADEGEYECRVSTFPAGSFQARLRLRV ; ;GELETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGS VLLRNAVQADEGEYECRVSTFPAGSFQARLRLRV ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ILE n 1 3 VAL n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 PRO n 1 9 ASP n 1 10 SER n 1 11 LEU n 1 12 ALA n 1 13 VAL n 1 14 SER n 1 15 LEU n 1 16 GLY n 1 17 GLU n 1 18 ARG n 1 19 ALA n 1 20 THR n 1 21 ILE n 1 22 ASN n 1 23 CYS n 1 24 LYS n 1 25 SER n 1 26 SER n 1 27 GLN n 1 28 SER n 1 29 LEU n 1 30 LEU n 1 31 ASN n 1 32 THR n 1 33 TYR n 1 34 SER n 1 35 GLN n 1 36 LYS n 1 37 ASN n 1 38 TYR n 1 39 LEU n 1 40 ALA n 1 41 TRP n 1 42 TYR n 1 43 GLN n 1 44 GLN n 1 45 LYS n 1 46 PRO n 1 47 GLY n 1 48 GLN n 1 49 PRO n 1 50 PRO n 1 51 LYS n 1 52 LEU n 1 53 LEU n 1 54 ILE n 1 55 TYR n 1 56 PHE n 1 57 ALA n 1 58 SER n 1 59 THR n 1 60 ARG n 1 61 GLU n 1 62 SER n 1 63 GLY n 1 64 VAL n 1 65 PRO n 1 66 ASP n 1 67 ARG n 1 68 PHE n 1 69 SER n 1 70 GLY n 1 71 SER n 1 72 GLY n 1 73 SER n 1 74 GLY n 1 75 THR n 1 76 ASP n 1 77 PHE n 1 78 THR n 1 79 LEU n 1 80 THR n 1 81 ILE n 1 82 SER n 1 83 SER n 1 84 LEU n 1 85 GLN n 1 86 ALA n 1 87 GLU n 1 88 ASP n 1 89 VAL n 1 90 ALA n 1 91 VAL n 1 92 TYR n 1 93 TYR n 1 94 CYS n 1 95 GLN n 1 96 GLN n 1 97 HIS n 1 98 TYR n 1 99 ASN n 1 100 THR n 1 101 PRO n 1 102 PHE n 1 103 THR n 1 104 PHE n 1 105 GLY n 1 106 GLY n 1 107 GLY n 1 108 THR n 1 109 LYS n 1 110 VAL n 1 111 GLU n 1 112 ILE n 1 113 LYS n 1 114 ARG n 1 115 THR n 1 116 VAL n 1 117 ALA n 1 118 ALA n 1 119 PRO n 1 120 SER n 1 121 VAL n 1 122 PHE n 1 123 ILE n 1 124 PHE n 1 125 PRO n 1 126 PRO n 1 127 SER n 1 128 ASP n 1 129 GLU n 1 130 GLN n 1 131 LEU n 1 132 LYS n 1 133 SER n 1 134 GLY n 1 135 THR n 1 136 ALA n 1 137 SER n 1 138 VAL n 1 139 VAL n 1 140 CYS n 1 141 LEU n 1 142 LEU n 1 143 ASN n 1 144 ASN n 1 145 PHE n 1 146 TYR n 1 147 PRO n 1 148 ARG n 1 149 GLU n 1 150 ALA n 1 151 LYS n 1 152 VAL n 1 153 GLN n 1 154 TRP n 1 155 LYS n 1 156 VAL n 1 157 ASP n 1 158 ASN n 1 159 ALA n 1 160 LEU n 1 161 GLN n 1 162 SER n 1 163 GLY n 1 164 ASN n 1 165 SER n 1 166 GLN n 1 167 GLU n 1 168 SER n 1 169 VAL n 1 170 THR n 1 171 GLU n 1 172 GLN n 1 173 ASP n 1 174 SER n 1 175 LYS n 1 176 ASP n 1 177 SER n 1 178 THR n 1 179 TYR n 1 180 SER n 1 181 LEU n 1 182 SER n 1 183 SER n 1 184 THR n 1 185 LEU n 1 186 THR n 1 187 LEU n 1 188 SER n 1 189 LYS n 1 190 ALA n 1 191 ASP n 1 192 TYR n 1 193 GLU n 1 194 LYS n 1 195 HIS n 1 196 LYS n 1 197 VAL n 1 198 TYR n 1 199 ALA n 1 200 CYS n 1 201 GLU n 1 202 VAL n 1 203 THR n 1 204 HIS n 1 205 GLN n 1 206 GLY n 1 207 LEU n 1 208 SER n 1 209 SER n 1 210 PRO n 1 211 VAL n 1 212 THR n 1 213 LYS n 1 214 SER n 1 215 PHE n 1 216 ASN n 1 217 ARG n 1 218 GLY n 2 1 GLU n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 GLN n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 PRO n 2 10 GLY n 2 11 LEU n 2 12 VAL n 2 13 LYS n 2 14 PRO n 2 15 SER n 2 16 GLU n 2 17 THR n 2 18 LEU n 2 19 SER n 2 20 LEU n 2 21 THR n 2 22 CYS n 2 23 THR n 2 24 VAL n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 SER n 2 29 LEU n 2 30 ILE n 2 31 ASP n 2 32 TYR n 2 33 GLY n 2 34 VAL n 2 35 SER n 2 36 TRP n 2 37 ILE n 2 38 ARG n 2 39 GLN n 2 40 PRO n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 ILE n 2 49 GLY n 2 50 VAL n 2 51 ILE n 2 52 TRP n 2 53 GLY n 2 54 GLY n 2 55 GLY n 2 56 LYS n 2 57 ILE n 2 58 TYR n 2 59 TYR n 2 60 ASN n 2 61 SER n 2 62 VAL n 2 63 LEU n 2 64 LYS n 2 65 SER n 2 66 ARG n 2 67 VAL n 2 68 THR n 2 69 ILE n 2 70 SER n 2 71 LYS n 2 72 ASP n 2 73 ASN n 2 74 SER n 2 75 LYS n 2 76 SER n 2 77 GLN n 2 78 VAL n 2 79 SER n 2 80 LEU n 2 81 LYS n 2 82 LEU n 2 83 SER n 2 84 SER n 2 85 VAL n 2 86 THR n 2 87 ALA n 2 88 ALA n 2 89 ASP n 2 90 THR n 2 91 ALA n 2 92 VAL n 2 93 TYR n 2 94 TYR n 2 95 CYS n 2 96 ALA n 2 97 LYS n 2 98 GLN n 2 99 GLY n 2 100 GLY n 2 101 LEU n 2 102 LEU n 2 103 PHE n 2 104 TYR n 2 105 ALA n 2 106 MET n 2 107 ASP n 2 108 TYR n 2 109 TRP n 2 110 GLY n 2 111 GLN n 2 112 GLY n 2 113 THR n 2 114 LEU n 2 115 VAL n 2 116 THR n 2 117 VAL n 2 118 SER n 2 119 SER n 2 120 ALA n 2 121 SER n 2 122 THR n 2 123 LYS n 2 124 GLY n 2 125 PRO n 2 126 SER n 2 127 VAL n 2 128 PHE n 2 129 PRO n 2 130 LEU n 2 131 ALA n 2 132 PRO n 2 133 SER n 2 134 SER n 2 135 LYS n 2 136 SER n 2 137 THR n 2 138 SER n 2 139 GLY n 2 140 GLY n 2 141 THR n 2 142 ALA n 2 143 ALA n 2 144 LEU n 2 145 GLY n 2 146 CYS n 2 147 LEU n 2 148 VAL n 2 149 LYS n 2 150 ASP n 2 151 TYR n 2 152 PHE n 2 153 PRO n 2 154 GLU n 2 155 PRO n 2 156 VAL n 2 157 THR n 2 158 VAL n 2 159 SER n 2 160 TRP n 2 161 ASN n 2 162 SER n 2 163 GLY n 2 164 ALA n 2 165 LEU n 2 166 THR n 2 167 SER n 2 168 GLY n 2 169 VAL n 2 170 HIS n 2 171 THR n 2 172 PHE n 2 173 PRO n 2 174 ALA n 2 175 VAL n 2 176 LEU n 2 177 GLN n 2 178 SER n 2 179 SER n 2 180 GLY n 2 181 LEU n 2 182 TYR n 2 183 SER n 2 184 LEU n 2 185 SER n 2 186 SER n 2 187 VAL n 2 188 VAL n 2 189 THR n 2 190 VAL n 2 191 PRO n 2 192 SER n 2 193 SER n 2 194 SER n 2 195 LEU n 2 196 GLY n 2 197 THR n 2 198 GLN n 2 199 THR n 2 200 TYR n 2 201 ILE n 2 202 CYS n 2 203 ASN n 2 204 VAL n 2 205 ASN n 2 206 HIS n 2 207 LYS n 2 208 PRO n 2 209 SER n 2 210 ASN n 2 211 THR n 2 212 LYS n 2 213 VAL n 2 214 ASP n 2 215 LYS n 2 216 ARG n 2 217 VAL n 2 218 GLU n 2 219 PRO n 2 220 LYS n 3 1 GLY n 3 2 GLU n 3 3 LEU n 3 4 GLU n 3 5 THR n 3 6 SER n 3 7 ASP n 3 8 VAL n 3 9 VAL n 3 10 THR n 3 11 VAL n 3 12 VAL n 3 13 LEU n 3 14 GLY n 3 15 GLN n 3 16 ASP n 3 17 ALA n 3 18 LYS n 3 19 LEU n 3 20 PRO n 3 21 CYS n 3 22 PHE n 3 23 TYR n 3 24 ARG n 3 25 GLY n 3 26 ASP n 3 27 SER n 3 28 GLY n 3 29 GLU n 3 30 GLN n 3 31 VAL n 3 32 GLY n 3 33 GLN n 3 34 VAL n 3 35 ALA n 3 36 TRP n 3 37 ALA n 3 38 ARG n 3 39 VAL n 3 40 ASP n 3 41 ALA n 3 42 GLY n 3 43 GLU n 3 44 GLY n 3 45 ALA n 3 46 GLN n 3 47 GLU n 3 48 LEU n 3 49 ALA n 3 50 LEU n 3 51 LEU n 3 52 HIS n 3 53 SER n 3 54 LYS n 3 55 TYR n 3 56 GLY n 3 57 LEU n 3 58 HIS n 3 59 VAL n 3 60 SER n 3 61 PRO n 3 62 ALA n 3 63 TYR n 3 64 GLU n 3 65 GLY n 3 66 ARG n 3 67 VAL n 3 68 GLU n 3 69 GLN n 3 70 PRO n 3 71 PRO n 3 72 PRO n 3 73 PRO n 3 74 ARG n 3 75 ASN n 3 76 PRO n 3 77 LEU n 3 78 ASP n 3 79 GLY n 3 80 SER n 3 81 VAL n 3 82 LEU n 3 83 LEU n 3 84 ARG n 3 85 ASN n 3 86 ALA n 3 87 VAL n 3 88 GLN n 3 89 ALA n 3 90 ASP n 3 91 GLU n 3 92 GLY n 3 93 GLU n 3 94 TYR n 3 95 GLU n 3 96 CYS n 3 97 ARG n 3 98 VAL n 3 99 SER n 3 100 THR n 3 101 PHE n 3 102 PRO n 3 103 ALA n 3 104 GLY n 3 105 SER n 3 106 PHE n 3 107 GLN n 3 108 ALA n 3 109 ARG n 3 110 LEU n 3 111 ARG n 3 112 LEU n 3 113 ARG n 3 114 VAL n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 218 ? ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 220 ? ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 114 human ? 'NECTIN4, LNIR, PRR4, PVRL4' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP L . n A 1 2 ILE 2 2 2 ILE ILE L . n A 1 3 VAL 3 3 3 VAL VAL L . n A 1 4 MET 4 4 4 MET MET L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 SER 7 7 7 SER SER L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 ASP 9 9 9 ASP ASP L . n A 1 10 SER 10 10 10 SER SER L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 ALA 12 12 12 ALA ALA L . n A 1 13 VAL 13 13 13 VAL VAL L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 LEU 15 15 15 LEU LEU L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 GLU 17 17 17 GLU GLU L . n A 1 18 ARG 18 18 18 ARG ARG L . n A 1 19 ALA 19 19 19 ALA ALA L . n A 1 20 THR 20 20 20 THR THR L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 ASN 22 22 22 ASN ASN L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 LYS 24 24 24 LYS LYS L . n A 1 25 SER 25 25 25 SER SER L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLN 27 27 27 GLN GLN L . n A 1 28 SER 28 28 28 SER SER L . n A 1 29 LEU 29 29 29 LEU LEU L . n A 1 30 LEU 30 30 30 LEU LEU L . n A 1 31 ASN 31 31 31 ASN ASN L . n A 1 32 THR 32 32 32 THR THR L . n A 1 33 TYR 33 33 33 TYR TYR L . n A 1 34 SER 34 34 34 SER SER L . n A 1 35 GLN 35 35 35 GLN GLN L . n A 1 36 LYS 36 36 36 LYS LYS L . n A 1 37 ASN 37 37 37 ASN ASN L . n A 1 38 TYR 38 38 38 TYR TYR L . n A 1 39 LEU 39 39 39 LEU LEU L . n A 1 40 ALA 40 40 40 ALA ALA L . n A 1 41 TRP 41 41 41 TRP TRP L . n A 1 42 TYR 42 42 42 TYR TYR L . n A 1 43 GLN 43 43 43 GLN GLN L . n A 1 44 GLN 44 44 44 GLN GLN L . n A 1 45 LYS 45 45 45 LYS LYS L . n A 1 46 PRO 46 46 46 PRO PRO L . n A 1 47 GLY 47 47 47 GLY GLY L . n A 1 48 GLN 48 48 48 GLN GLN L . n A 1 49 PRO 49 49 49 PRO PRO L . n A 1 50 PRO 50 50 50 PRO PRO L . n A 1 51 LYS 51 51 51 LYS LYS L . n A 1 52 LEU 52 52 52 LEU LEU L . n A 1 53 LEU 53 53 53 LEU LEU L . n A 1 54 ILE 54 54 54 ILE ILE L . n A 1 55 TYR 55 55 55 TYR TYR L . n A 1 56 PHE 56 56 56 PHE PHE L . n A 1 57 ALA 57 57 57 ALA ALA L . n A 1 58 SER 58 58 58 SER SER L . n A 1 59 THR 59 59 59 THR THR L . n A 1 60 ARG 60 60 60 ARG ARG L . n A 1 61 GLU 61 61 61 GLU GLU L . n A 1 62 SER 62 62 62 SER SER L . n A 1 63 GLY 63 63 63 GLY GLY L . n A 1 64 VAL 64 64 64 VAL VAL L . n A 1 65 PRO 65 65 65 PRO PRO L . n A 1 66 ASP 66 66 66 ASP ASP L . n A 1 67 ARG 67 67 67 ARG ARG L . n A 1 68 PHE 68 68 68 PHE PHE L . n A 1 69 SER 69 69 69 SER SER L . n A 1 70 GLY 70 70 70 GLY GLY L . n A 1 71 SER 71 71 71 SER SER L . n A 1 72 GLY 72 72 72 GLY GLY L . n A 1 73 SER 73 73 73 SER SER L . n A 1 74 GLY 74 74 74 GLY GLY L . n A 1 75 THR 75 75 75 THR THR L . n A 1 76 ASP 76 76 76 ASP ASP L . n A 1 77 PHE 77 77 77 PHE PHE L . n A 1 78 THR 78 78 78 THR THR L . n A 1 79 LEU 79 79 79 LEU LEU L . n A 1 80 THR 80 80 80 THR THR L . n A 1 81 ILE 81 81 81 ILE ILE L . n A 1 82 SER 82 82 82 SER SER L . n A 1 83 SER 83 83 83 SER SER L . n A 1 84 LEU 84 84 84 LEU LEU L . n A 1 85 GLN 85 85 85 GLN GLN L . n A 1 86 ALA 86 86 86 ALA ALA L . n A 1 87 GLU 87 87 87 GLU GLU L . n A 1 88 ASP 88 88 88 ASP ASP L . n A 1 89 VAL 89 89 89 VAL VAL L . n A 1 90 ALA 90 90 90 ALA ALA L . n A 1 91 VAL 91 91 91 VAL VAL L . n A 1 92 TYR 92 92 92 TYR TYR L . n A 1 93 TYR 93 93 93 TYR TYR L . n A 1 94 CYS 94 94 94 CYS CYS L . n A 1 95 GLN 95 95 95 GLN GLN L . n A 1 96 GLN 96 96 96 GLN GLN L . n A 1 97 HIS 97 97 97 HIS HIS L . n A 1 98 TYR 98 98 98 TYR TYR L . n A 1 99 ASN 99 99 99 ASN ASN L . n A 1 100 THR 100 100 100 THR THR L . n A 1 101 PRO 101 101 101 PRO PRO L . n A 1 102 PHE 102 102 102 PHE PHE L . n A 1 103 THR 103 103 103 THR THR L . n A 1 104 PHE 104 104 104 PHE PHE L . n A 1 105 GLY 105 105 105 GLY GLY L . n A 1 106 GLY 106 106 106 GLY GLY L . n A 1 107 GLY 107 107 107 GLY GLY L . n A 1 108 THR 108 108 108 THR THR L . n A 1 109 LYS 109 109 109 LYS LYS L . n A 1 110 VAL 110 110 110 VAL VAL L . n A 1 111 GLU 111 111 111 GLU GLU L . n A 1 112 ILE 112 112 112 ILE ILE L . n A 1 113 LYS 113 113 113 LYS LYS L . n A 1 114 ARG 114 114 114 ARG ARG L . n A 1 115 THR 115 115 115 THR THR L . n A 1 116 VAL 116 116 116 VAL VAL L . n A 1 117 ALA 117 117 117 ALA ALA L . n A 1 118 ALA 118 118 118 ALA ALA L . n A 1 119 PRO 119 119 119 PRO PRO L . n A 1 120 SER 120 120 120 SER SER L . n A 1 121 VAL 121 121 121 VAL VAL L . n A 1 122 PHE 122 122 122 PHE PHE L . n A 1 123 ILE 123 123 123 ILE ILE L . n A 1 124 PHE 124 124 124 PHE PHE L . n A 1 125 PRO 125 125 125 PRO PRO L . n A 1 126 PRO 126 126 126 PRO PRO L . n A 1 127 SER 127 127 127 SER SER L . n A 1 128 ASP 128 128 128 ASP ASP L . n A 1 129 GLU 129 129 129 GLU GLU L . n A 1 130 GLN 130 130 130 GLN GLN L . n A 1 131 LEU 131 131 131 LEU LEU L . n A 1 132 LYS 132 132 132 LYS LYS L . n A 1 133 SER 133 133 133 SER SER L . n A 1 134 GLY 134 134 134 GLY GLY L . n A 1 135 THR 135 135 135 THR THR L . n A 1 136 ALA 136 136 136 ALA ALA L . n A 1 137 SER 137 137 137 SER SER L . n A 1 138 VAL 138 138 138 VAL VAL L . n A 1 139 VAL 139 139 139 VAL VAL L . n A 1 140 CYS 140 140 140 CYS CYS L . n A 1 141 LEU 141 141 141 LEU LEU L . n A 1 142 LEU 142 142 142 LEU LEU L . n A 1 143 ASN 143 143 143 ASN ASN L . n A 1 144 ASN 144 144 144 ASN ASN L . n A 1 145 PHE 145 145 145 PHE PHE L . n A 1 146 TYR 146 146 146 TYR TYR L . n A 1 147 PRO 147 147 147 PRO PRO L . n A 1 148 ARG 148 148 148 ARG ARG L . n A 1 149 GLU 149 149 149 GLU GLU L . n A 1 150 ALA 150 150 150 ALA ALA L . n A 1 151 LYS 151 151 151 LYS LYS L . n A 1 152 VAL 152 152 152 VAL VAL L . n A 1 153 GLN 153 153 153 GLN GLN L . n A 1 154 TRP 154 154 154 TRP TRP L . n A 1 155 LYS 155 155 155 LYS LYS L . n A 1 156 VAL 156 156 156 VAL VAL L . n A 1 157 ASP 157 157 157 ASP ASP L . n A 1 158 ASN 158 158 158 ASN ASN L . n A 1 159 ALA 159 159 159 ALA ALA L . n A 1 160 LEU 160 160 160 LEU LEU L . n A 1 161 GLN 161 161 161 GLN GLN L . n A 1 162 SER 162 162 162 SER SER L . n A 1 163 GLY 163 163 163 GLY GLY L . n A 1 164 ASN 164 164 164 ASN ASN L . n A 1 165 SER 165 165 165 SER SER L . n A 1 166 GLN 166 166 166 GLN GLN L . n A 1 167 GLU 167 167 167 GLU GLU L . n A 1 168 SER 168 168 168 SER SER L . n A 1 169 VAL 169 169 169 VAL VAL L . n A 1 170 THR 170 170 170 THR THR L . n A 1 171 GLU 171 171 171 GLU GLU L . n A 1 172 GLN 172 172 172 GLN GLN L . n A 1 173 ASP 173 173 173 ASP ASP L . n A 1 174 SER 174 174 174 SER SER L . n A 1 175 LYS 175 175 175 LYS LYS L . n A 1 176 ASP 176 176 176 ASP ASP L . n A 1 177 SER 177 177 177 SER SER L . n A 1 178 THR 178 178 178 THR THR L . n A 1 179 TYR 179 179 179 TYR TYR L . n A 1 180 SER 180 180 180 SER SER L . n A 1 181 LEU 181 181 181 LEU LEU L . n A 1 182 SER 182 182 182 SER SER L . n A 1 183 SER 183 183 183 SER SER L . n A 1 184 THR 184 184 184 THR THR L . n A 1 185 LEU 185 185 185 LEU LEU L . n A 1 186 THR 186 186 186 THR THR L . n A 1 187 LEU 187 187 187 LEU LEU L . n A 1 188 SER 188 188 188 SER SER L . n A 1 189 LYS 189 189 189 LYS LYS L . n A 1 190 ALA 190 190 190 ALA ALA L . n A 1 191 ASP 191 191 191 ASP ASP L . n A 1 192 TYR 192 192 192 TYR TYR L . n A 1 193 GLU 193 193 193 GLU GLU L . n A 1 194 LYS 194 194 194 LYS LYS L . n A 1 195 HIS 195 195 195 HIS HIS L . n A 1 196 LYS 196 196 196 LYS LYS L . n A 1 197 VAL 197 197 197 VAL VAL L . n A 1 198 TYR 198 198 198 TYR TYR L . n A 1 199 ALA 199 199 199 ALA ALA L . n A 1 200 CYS 200 200 200 CYS CYS L . n A 1 201 GLU 201 201 201 GLU GLU L . n A 1 202 VAL 202 202 202 VAL VAL L . n A 1 203 THR 203 203 203 THR THR L . n A 1 204 HIS 204 204 204 HIS HIS L . n A 1 205 GLN 205 205 205 GLN GLN L . n A 1 206 GLY 206 206 206 GLY GLY L . n A 1 207 LEU 207 207 207 LEU LEU L . n A 1 208 SER 208 208 208 SER SER L . n A 1 209 SER 209 209 209 SER SER L . n A 1 210 PRO 210 210 210 PRO PRO L . n A 1 211 VAL 211 211 211 VAL VAL L . n A 1 212 THR 212 212 212 THR THR L . n A 1 213 LYS 213 213 213 LYS LYS L . n A 1 214 SER 214 214 214 SER SER L . n A 1 215 PHE 215 215 215 PHE PHE L . n A 1 216 ASN 216 216 216 ASN ASN L . n A 1 217 ARG 217 217 217 ARG ARG L . n A 1 218 GLY 218 218 218 GLY GLY L . n B 2 1 GLU 1 2 2 GLU GLU H . n B 2 2 VAL 2 3 3 VAL VAL H . n B 2 3 GLN 3 4 4 GLN GLN H . n B 2 4 LEU 4 5 5 LEU LEU H . n B 2 5 GLN 5 6 6 GLN GLN H . n B 2 6 GLU 6 7 7 GLU GLU H . n B 2 7 SER 7 8 8 SER SER H . n B 2 8 GLY 8 9 9 GLY GLY H . n B 2 9 PRO 9 10 10 PRO PRO H . n B 2 10 GLY 10 11 11 GLY GLY H . n B 2 11 LEU 11 12 12 LEU LEU H . n B 2 12 VAL 12 13 13 VAL VAL H . n B 2 13 LYS 13 14 14 LYS LYS H . n B 2 14 PRO 14 15 15 PRO PRO H . n B 2 15 SER 15 16 16 SER SER H . n B 2 16 GLU 16 17 17 GLU GLU H . n B 2 17 THR 17 18 18 THR THR H . n B 2 18 LEU 18 19 19 LEU LEU H . n B 2 19 SER 19 20 20 SER SER H . n B 2 20 LEU 20 21 21 LEU LEU H . n B 2 21 THR 21 22 22 THR THR H . n B 2 22 CYS 22 23 23 CYS CYS H . n B 2 23 THR 23 24 24 THR THR H . n B 2 24 VAL 24 25 25 VAL VAL H . n B 2 25 SER 25 26 26 SER SER H . n B 2 26 GLY 26 27 27 GLY GLY H . n B 2 27 PHE 27 28 28 PHE PHE H . n B 2 28 SER 28 29 29 SER SER H . n B 2 29 LEU 29 30 30 LEU LEU H . n B 2 30 ILE 30 31 31 ILE ILE H . n B 2 31 ASP 31 32 32 ASP ASP H . n B 2 32 TYR 32 33 33 TYR TYR H . n B 2 33 GLY 33 34 34 GLY GLY H . n B 2 34 VAL 34 35 35 VAL VAL H . n B 2 35 SER 35 36 36 SER SER H . n B 2 36 TRP 36 37 37 TRP TRP H . n B 2 37 ILE 37 38 38 ILE ILE H . n B 2 38 ARG 38 39 39 ARG ARG H . n B 2 39 GLN 39 40 40 GLN GLN H . n B 2 40 PRO 40 41 41 PRO PRO H . n B 2 41 PRO 41 42 42 PRO PRO H . n B 2 42 GLY 42 43 43 GLY GLY H . n B 2 43 LYS 43 44 44 LYS LYS H . n B 2 44 GLY 44 45 45 GLY GLY H . n B 2 45 LEU 45 46 46 LEU LEU H . n B 2 46 GLU 46 47 47 GLU GLU H . n B 2 47 TRP 47 48 48 TRP TRP H . n B 2 48 ILE 48 49 49 ILE ILE H . n B 2 49 GLY 49 50 50 GLY GLY H . n B 2 50 VAL 50 51 51 VAL VAL H . n B 2 51 ILE 51 52 52 ILE ILE H . n B 2 52 TRP 52 53 53 TRP TRP H . n B 2 53 GLY 53 54 54 GLY GLY H . n B 2 54 GLY 54 55 55 GLY GLY H . n B 2 55 GLY 55 56 56 GLY GLY H . n B 2 56 LYS 56 57 57 LYS LYS H . n B 2 57 ILE 57 58 58 ILE ILE H . n B 2 58 TYR 58 59 59 TYR TYR H . n B 2 59 TYR 59 60 60 TYR TYR H . n B 2 60 ASN 60 61 61 ASN ASN H . n B 2 61 SER 61 62 62 SER SER H . n B 2 62 VAL 62 63 63 VAL VAL H . n B 2 63 LEU 63 64 64 LEU LEU H . n B 2 64 LYS 64 65 65 LYS LYS H . n B 2 65 SER 65 66 66 SER SER H . n B 2 66 ARG 66 67 67 ARG ARG H . n B 2 67 VAL 67 68 68 VAL VAL H . n B 2 68 THR 68 69 69 THR THR H . n B 2 69 ILE 69 70 70 ILE ILE H . n B 2 70 SER 70 71 71 SER SER H . n B 2 71 LYS 71 72 72 LYS LYS H . n B 2 72 ASP 72 73 73 ASP ASP H . n B 2 73 ASN 73 74 74 ASN ASN H . n B 2 74 SER 74 75 75 SER SER H . n B 2 75 LYS 75 76 76 LYS LYS H . n B 2 76 SER 76 77 77 SER SER H . n B 2 77 GLN 77 78 78 GLN GLN H . n B 2 78 VAL 78 79 79 VAL VAL H . n B 2 79 SER 79 80 80 SER SER H . n B 2 80 LEU 80 81 81 LEU LEU H . n B 2 81 LYS 81 82 82 LYS LYS H . n B 2 82 LEU 82 83 83 LEU LEU H . n B 2 83 SER 83 84 84 SER SER H . n B 2 84 SER 84 85 85 SER SER H . n B 2 85 VAL 85 86 86 VAL VAL H . n B 2 86 THR 86 87 87 THR THR H . n B 2 87 ALA 87 88 88 ALA ALA H . n B 2 88 ALA 88 89 89 ALA ALA H . n B 2 89 ASP 89 90 90 ASP ASP H . n B 2 90 THR 90 91 91 THR THR H . n B 2 91 ALA 91 92 92 ALA ALA H . n B 2 92 VAL 92 93 93 VAL VAL H . n B 2 93 TYR 93 94 94 TYR TYR H . n B 2 94 TYR 94 95 95 TYR TYR H . n B 2 95 CYS 95 96 96 CYS CYS H . n B 2 96 ALA 96 97 97 ALA ALA H . n B 2 97 LYS 97 98 98 LYS LYS H . n B 2 98 GLN 98 99 99 GLN GLN H . n B 2 99 GLY 99 100 100 GLY GLY H . n B 2 100 GLY 100 101 101 GLY GLY H . n B 2 101 LEU 101 102 102 LEU LEU H . n B 2 102 LEU 102 103 103 LEU LEU H . n B 2 103 PHE 103 104 104 PHE PHE H . n B 2 104 TYR 104 105 105 TYR TYR H . n B 2 105 ALA 105 106 106 ALA ALA H . n B 2 106 MET 106 107 107 MET MET H . n B 2 107 ASP 107 108 108 ASP ASP H . n B 2 108 TYR 108 109 109 TYR TYR H . n B 2 109 TRP 109 110 110 TRP TRP H . n B 2 110 GLY 110 111 111 GLY GLY H . n B 2 111 GLN 111 112 112 GLN GLN H . n B 2 112 GLY 112 113 113 GLY GLY H . n B 2 113 THR 113 114 114 THR THR H . n B 2 114 LEU 114 115 115 LEU LEU H . n B 2 115 VAL 115 116 116 VAL VAL H . n B 2 116 THR 116 117 117 THR THR H . n B 2 117 VAL 117 118 118 VAL VAL H . n B 2 118 SER 118 119 119 SER SER H . n B 2 119 SER 119 120 120 SER SER H . n B 2 120 ALA 120 121 121 ALA ALA H . n B 2 121 SER 121 122 122 SER SER H . n B 2 122 THR 122 123 123 THR THR H . n B 2 123 LYS 123 124 124 LYS LYS H . n B 2 124 GLY 124 125 125 GLY GLY H . n B 2 125 PRO 125 126 126 PRO PRO H . n B 2 126 SER 126 127 127 SER SER H . n B 2 127 VAL 127 128 128 VAL VAL H . n B 2 128 PHE 128 129 129 PHE PHE H . n B 2 129 PRO 129 130 130 PRO PRO H . n B 2 130 LEU 130 131 131 LEU LEU H . n B 2 131 ALA 131 132 132 ALA ALA H . n B 2 132 PRO 132 133 133 PRO PRO H . n B 2 133 SER 133 134 134 SER SER H . n B 2 134 SER 134 135 135 SER SER H . n B 2 135 LYS 135 136 ? ? ? H . n B 2 136 SER 136 137 ? ? ? H . n B 2 137 THR 137 138 ? ? ? H . n B 2 138 SER 138 139 ? ? ? H . n B 2 139 GLY 139 140 ? ? ? H . n B 2 140 GLY 140 141 141 GLY GLY H . n B 2 141 THR 141 142 142 THR THR H . n B 2 142 ALA 142 143 143 ALA ALA H . n B 2 143 ALA 143 144 144 ALA ALA H . n B 2 144 LEU 144 145 145 LEU LEU H . n B 2 145 GLY 145 146 146 GLY GLY H . n B 2 146 CYS 146 147 147 CYS CYS H . n B 2 147 LEU 147 148 148 LEU LEU H . n B 2 148 VAL 148 149 149 VAL VAL H . n B 2 149 LYS 149 150 150 LYS LYS H . n B 2 150 ASP 150 151 151 ASP ASP H . n B 2 151 TYR 151 152 152 TYR TYR H . n B 2 152 PHE 152 153 153 PHE PHE H . n B 2 153 PRO 153 154 154 PRO PRO H . n B 2 154 GLU 154 155 155 GLU GLU H . n B 2 155 PRO 155 156 156 PRO PRO H . n B 2 156 VAL 156 157 157 VAL VAL H . n B 2 157 THR 157 158 158 THR THR H . n B 2 158 VAL 158 159 159 VAL VAL H . n B 2 159 SER 159 160 160 SER SER H . n B 2 160 TRP 160 161 161 TRP TRP H . n B 2 161 ASN 161 162 162 ASN ASN H . n B 2 162 SER 162 163 163 SER SER H . n B 2 163 GLY 163 164 164 GLY GLY H . n B 2 164 ALA 164 165 165 ALA ALA H . n B 2 165 LEU 165 166 166 LEU LEU H . n B 2 166 THR 166 167 167 THR THR H . n B 2 167 SER 167 168 168 SER SER H . n B 2 168 GLY 168 169 169 GLY GLY H . n B 2 169 VAL 169 170 170 VAL VAL H . n B 2 170 HIS 170 171 171 HIS HIS H . n B 2 171 THR 171 172 172 THR THR H . n B 2 172 PHE 172 173 173 PHE PHE H . n B 2 173 PRO 173 174 174 PRO PRO H . n B 2 174 ALA 174 175 175 ALA ALA H . n B 2 175 VAL 175 176 176 VAL VAL H . n B 2 176 LEU 176 177 177 LEU LEU H . n B 2 177 GLN 177 178 178 GLN GLN H . n B 2 178 SER 178 179 179 SER SER H . n B 2 179 SER 179 180 180 SER SER H . n B 2 180 GLY 180 181 181 GLY GLY H . n B 2 181 LEU 181 182 182 LEU LEU H . n B 2 182 TYR 182 183 183 TYR TYR H . n B 2 183 SER 183 184 184 SER SER H . n B 2 184 LEU 184 185 185 LEU LEU H . n B 2 185 SER 185 186 186 SER SER H . n B 2 186 SER 186 187 187 SER SER H . n B 2 187 VAL 187 188 188 VAL VAL H . n B 2 188 VAL 188 189 189 VAL VAL H . n B 2 189 THR 189 190 190 THR THR H . n B 2 190 VAL 190 191 191 VAL VAL H . n B 2 191 PRO 191 192 192 PRO PRO H . n B 2 192 SER 192 193 193 SER SER H . n B 2 193 SER 193 194 194 SER SER H . n B 2 194 SER 194 195 195 SER SER H . n B 2 195 LEU 195 196 196 LEU LEU H . n B 2 196 GLY 196 197 197 GLY GLY H . n B 2 197 THR 197 198 198 THR THR H . n B 2 198 GLN 198 199 199 GLN GLN H . n B 2 199 THR 199 200 200 THR THR H . n B 2 200 TYR 200 201 201 TYR TYR H . n B 2 201 ILE 201 202 202 ILE ILE H . n B 2 202 CYS 202 203 203 CYS CYS H . n B 2 203 ASN 203 204 204 ASN ASN H . n B 2 204 VAL 204 205 205 VAL VAL H . n B 2 205 ASN 205 206 206 ASN ASN H . n B 2 206 HIS 206 207 207 HIS HIS H . n B 2 207 LYS 207 208 208 LYS LYS H . n B 2 208 PRO 208 209 209 PRO PRO H . n B 2 209 SER 209 210 210 SER SER H . n B 2 210 ASN 210 211 211 ASN ASN H . n B 2 211 THR 211 212 212 THR THR H . n B 2 212 LYS 212 213 213 LYS LYS H . n B 2 213 VAL 213 214 214 VAL VAL H . n B 2 214 ASP 214 215 215 ASP ASP H . n B 2 215 LYS 215 216 216 LYS LYS H . n B 2 216 ARG 216 217 217 ARG ARG H . n B 2 217 VAL 217 218 218 VAL VAL H . n B 2 218 GLU 218 219 219 GLU GLU H . n B 2 219 PRO 219 220 220 PRO PRO H . n B 2 220 LYS 220 221 221 LYS LYS H . n C 3 1 GLY 1 32 ? ? ? A . n C 3 2 GLU 2 33 33 GLU GLU A . n C 3 3 LEU 3 34 34 LEU LEU A . n C 3 4 GLU 4 35 35 GLU GLU A . n C 3 5 THR 5 36 36 THR THR A . n C 3 6 SER 6 37 37 SER SER A . n C 3 7 ASP 7 38 38 ASP ASP A . n C 3 8 VAL 8 39 39 VAL VAL A . n C 3 9 VAL 9 40 40 VAL VAL A . n C 3 10 THR 10 41 41 THR THR A . n C 3 11 VAL 11 42 42 VAL VAL A . n C 3 12 VAL 12 43 43 VAL VAL A . n C 3 13 LEU 13 44 44 LEU LEU A . n C 3 14 GLY 14 45 45 GLY GLY A . n C 3 15 GLN 15 46 46 GLN GLN A . n C 3 16 ASP 16 47 47 ASP ASP A . n C 3 17 ALA 17 48 48 ALA ALA A . n C 3 18 LYS 18 49 49 LYS LYS A . n C 3 19 LEU 19 50 50 LEU LEU A . n C 3 20 PRO 20 51 51 PRO PRO A . n C 3 21 CYS 21 52 52 CYS CYS A . n C 3 22 PHE 22 53 53 PHE PHE A . n C 3 23 TYR 23 54 54 TYR TYR A . n C 3 24 ARG 24 55 55 ARG ARG A . n C 3 25 GLY 25 56 ? ? ? A . n C 3 26 ASP 26 57 ? ? ? A . n C 3 27 SER 27 58 ? ? ? A . n C 3 28 GLY 28 59 ? ? ? A . n C 3 29 GLU 29 60 ? ? ? A . n C 3 30 GLN 30 61 61 GLN GLN A . n C 3 31 VAL 31 62 62 VAL VAL A . n C 3 32 GLY 32 63 63 GLY GLY A . n C 3 33 GLN 33 64 64 GLN GLN A . n C 3 34 VAL 34 65 65 VAL VAL A . n C 3 35 ALA 35 66 66 ALA ALA A . n C 3 36 TRP 36 67 67 TRP TRP A . n C 3 37 ALA 37 68 68 ALA ALA A . n C 3 38 ARG 38 69 69 ARG ARG A . n C 3 39 VAL 39 70 70 VAL VAL A . n C 3 40 ASP 40 71 71 ASP ASP A . n C 3 41 ALA 41 72 72 ALA ALA A . n C 3 42 GLY 42 73 73 GLY GLY A . n C 3 43 GLU 43 74 74 GLU GLU A . n C 3 44 GLY 44 75 75 GLY GLY A . n C 3 45 ALA 45 76 76 ALA ALA A . n C 3 46 GLN 46 77 77 GLN GLN A . n C 3 47 GLU 47 78 78 GLU GLU A . n C 3 48 LEU 48 79 79 LEU LEU A . n C 3 49 ALA 49 80 80 ALA ALA A . n C 3 50 LEU 50 81 81 LEU LEU A . n C 3 51 LEU 51 82 82 LEU LEU A . n C 3 52 HIS 52 83 83 HIS HIS A . n C 3 53 SER 53 84 84 SER SER A . n C 3 54 LYS 54 85 85 LYS LYS A . n C 3 55 TYR 55 86 86 TYR TYR A . n C 3 56 GLY 56 87 87 GLY GLY A . n C 3 57 LEU 57 88 88 LEU LEU A . n C 3 58 HIS 58 89 89 HIS HIS A . n C 3 59 VAL 59 90 90 VAL VAL A . n C 3 60 SER 60 91 91 SER SER A . n C 3 61 PRO 61 92 92 PRO PRO A . n C 3 62 ALA 62 93 93 ALA ALA A . n C 3 63 TYR 63 94 94 TYR TYR A . n C 3 64 GLU 64 95 95 GLU GLU A . n C 3 65 GLY 65 96 96 GLY GLY A . n C 3 66 ARG 66 97 97 ARG ARG A . n C 3 67 VAL 67 98 98 VAL VAL A . n C 3 68 GLU 68 99 99 GLU GLU A . n C 3 69 GLN 69 100 100 GLN GLN A . n C 3 70 PRO 70 101 101 PRO PRO A . n C 3 71 PRO 71 102 102 PRO PRO A . n C 3 72 PRO 72 103 103 PRO PRO A . n C 3 73 PRO 73 104 104 PRO PRO A . n C 3 74 ARG 74 105 105 ARG ARG A . n C 3 75 ASN 75 106 106 ASN ASN A . n C 3 76 PRO 76 107 107 PRO PRO A . n C 3 77 LEU 77 108 108 LEU LEU A . n C 3 78 ASP 78 109 109 ASP ASP A . n C 3 79 GLY 79 110 110 GLY GLY A . n C 3 80 SER 80 111 111 SER SER A . n C 3 81 VAL 81 112 112 VAL VAL A . n C 3 82 LEU 82 113 113 LEU LEU A . n C 3 83 LEU 83 114 114 LEU LEU A . n C 3 84 ARG 84 115 115 ARG ARG A . n C 3 85 ASN 85 116 116 ASN ASN A . n C 3 86 ALA 86 117 117 ALA ALA A . n C 3 87 VAL 87 118 118 VAL VAL A . n C 3 88 GLN 88 119 119 GLN GLN A . n C 3 89 ALA 89 120 120 ALA ALA A . n C 3 90 ASP 90 121 121 ASP ASP A . n C 3 91 GLU 91 122 122 GLU GLU A . n C 3 92 GLY 92 123 123 GLY GLY A . n C 3 93 GLU 93 124 124 GLU GLU A . n C 3 94 TYR 94 125 125 TYR TYR A . n C 3 95 GLU 95 126 126 GLU GLU A . n C 3 96 CYS 96 127 127 CYS CYS A . n C 3 97 ARG 97 128 128 ARG ARG A . n C 3 98 VAL 98 129 129 VAL VAL A . n C 3 99 SER 99 130 130 SER SER A . n C 3 100 THR 100 131 131 THR THR A . n C 3 101 PHE 101 132 132 PHE PHE A . n C 3 102 PRO 102 133 133 PRO PRO A . n C 3 103 ALA 103 134 134 ALA ALA A . n C 3 104 GLY 104 135 135 GLY GLY A . n C 3 105 SER 105 136 136 SER SER A . n C 3 106 PHE 106 137 137 PHE PHE A . n C 3 107 GLN 107 138 138 GLN GLN A . n C 3 108 ALA 108 139 139 ALA ALA A . n C 3 109 ARG 109 140 140 ARG ARG A . n C 3 110 LEU 110 141 141 LEU LEU A . n C 3 111 ARG 111 142 142 ARG ARG A . n C 3 112 LEU 112 143 143 LEU LEU A . n C 3 113 ARG 113 144 144 ARG ARG A . n C 3 114 VAL 114 145 145 VAL VAL A . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9KKJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9KKJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9KKJ _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9KKJ _struct.title 'Structure of Nectin-4 D1 domain in complex with the Fab fragment of 9MW2821 mAb' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9KKJ _struct_keywords.text 'antibody-antigen complex, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9KKJ 9KKJ ? 1 ? 1 2 PDB 9KKJ 9KKJ ? 2 ? 1 3 UNP NECT4_HUMAN Q96NY8 ? 3 ;GELETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGS VLLRNAVQADEGEYECRVSTFPAGSFQARLRLRV ; 32 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9KKJ L 1 ? 218 ? 9KKJ 1 ? 218 ? 1 218 2 2 9KKJ H 1 ? 220 ? 9KKJ 2 ? 221 ? 2 221 3 3 9KKJ A 1 ? 114 ? Q96NY8 32 ? 145 ? 32 145 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 127 ? GLY A 134 ? SER L 127 GLY L 134 1 ? 8 HELX_P HELX_P2 AA2 LYS A 189 ? GLU A 193 ? LYS L 189 GLU L 193 1 ? 5 HELX_P HELX_P3 AA3 THR B 86 ? THR B 90 ? THR H 87 THR H 91 5 ? 5 HELX_P HELX_P4 AA4 SER B 193 ? GLY B 196 ? SER H 194 GLY H 197 5 ? 4 HELX_P HELX_P5 AA5 LYS B 207 ? ASN B 210 ? LYS H 208 ASN H 211 5 ? 4 HELX_P HELX_P6 AA6 VAL C 87 ? GLU C 91 ? VAL A 118 GLU A 122 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 94 SG ? ? L CYS 23 L CYS 94 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf2 disulf ? ? A CYS 140 SG ? ? ? 1_555 A CYS 200 SG ? ? L CYS 140 L CYS 200 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 95 SG ? ? H CYS 23 H CYS 96 1_555 ? ? ? ? ? ? ? 2.065 ? ? disulf4 disulf ? ? B CYS 146 SG ? ? ? 1_555 B CYS 202 SG ? ? H CYS 147 H CYS 203 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf5 disulf ? ? C CYS 21 SG ? ? ? 1_555 C CYS 96 SG ? ? A CYS 52 A CYS 127 1_555 ? ? ? ? ? ? ? 2.033 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 23 ? CYS A 94 ? CYS L 23 ? 1_555 CYS L 94 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 140 ? CYS A 200 ? CYS L 140 ? 1_555 CYS L 200 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 22 ? CYS B 95 ? CYS H 23 ? 1_555 CYS H 96 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 146 ? CYS B 202 ? CYS H 147 ? 1_555 CYS H 203 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS C 21 ? CYS C 96 ? CYS A 52 ? 1_555 CYS A 127 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 A . ? SER 7 L PRO 8 A ? PRO 8 L 1 6.27 2 THR 100 A . ? THR 100 L PRO 101 A ? PRO 101 L 1 27.34 3 PHE 152 B . ? PHE 153 H PRO 153 B ? PRO 154 H 1 -16.48 4 GLU 154 B . ? GLU 155 H PRO 155 B ? PRO 156 H 1 -7.28 5 PRO 72 C . ? PRO 103 A PRO 73 C ? PRO 104 A 1 -28.10 6 ASN 75 C . ? ASN 106 A PRO 76 C ? PRO 107 A 1 9.78 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 4 ? AA7 ? 4 ? AA8 ? 6 ? AA9 ? 4 ? AB1 ? 2 ? AB2 ? 3 ? AB3 ? 3 ? AB4 ? 3 ? AB5 ? 2 ? AB6 ? 6 ? AB7 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA8 4 5 ? anti-parallel AA8 5 6 ? anti-parallel AA9 1 2 ? parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB4 1 2 ? anti-parallel AB4 2 3 ? anti-parallel AB5 1 2 ? anti-parallel AB6 1 2 ? parallel AB6 2 3 ? anti-parallel AB6 3 4 ? anti-parallel AB6 4 5 ? anti-parallel AB6 5 6 ? anti-parallel AB7 1 2 ? anti-parallel AB7 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 MET A 4 ? GLN A 6 ? MET L 4 GLN L 6 AA1 2 ALA A 19 ? SER A 25 ? ALA L 19 SER L 25 AA1 3 ASP A 76 ? ILE A 81 ? ASP L 76 ILE L 81 AA1 4 SER A 71 ? SER A 73 ? SER L 71 SER L 73 AA2 1 SER A 10 ? VAL A 13 ? SER L 10 VAL L 13 AA2 2 THR A 108 ? ILE A 112 ? THR L 108 ILE L 112 AA2 3 VAL A 91 ? TYR A 92 ? VAL L 91 TYR L 92 AA3 1 LEU A 52 ? ILE A 54 ? LEU L 52 ILE L 54 AA3 2 LEU A 39 ? TYR A 42 ? LEU L 39 TYR L 42 AA3 3 CYS A 94 ? GLN A 96 ? CYS L 94 GLN L 96 AA3 4 THR A 103 ? PHE A 104 ? THR L 103 PHE L 104 AA4 1 VAL A 121 ? PHE A 124 ? VAL L 121 PHE L 124 AA4 2 THR A 135 ? PHE A 145 ? THR L 135 PHE L 145 AA4 3 TYR A 179 ? SER A 188 ? TYR L 179 SER L 188 AA4 4 SER A 165 ? THR A 170 ? SER L 165 THR L 170 AA5 1 ALA A 159 ? GLN A 161 ? ALA L 159 GLN L 161 AA5 2 VAL A 152 ? VAL A 156 ? VAL L 152 VAL L 156 AA5 3 VAL A 197 ? VAL A 202 ? VAL L 197 VAL L 202 AA5 4 VAL A 211 ? ASN A 216 ? VAL L 211 ASN L 216 AA6 1 GLN B 3 ? SER B 7 ? GLN H 4 SER H 8 AA6 2 THR B 21 ? SER B 25 ? THR H 22 SER H 26 AA6 3 GLN B 77 ? VAL B 85 ? GLN H 78 VAL H 86 AA6 4 GLU B 16 ? LEU B 18 ? GLU H 17 LEU H 19 AA7 1 GLN B 3 ? SER B 7 ? GLN H 4 SER H 8 AA7 2 THR B 21 ? SER B 25 ? THR H 22 SER H 26 AA7 3 GLN B 77 ? VAL B 85 ? GLN H 78 VAL H 86 AA7 4 VAL B 67 ? ASP B 72 ? VAL H 68 ASP H 73 AA8 1 LEU B 11 ? VAL B 12 ? LEU H 12 VAL H 13 AA8 2 THR B 113 ? VAL B 117 ? THR H 114 VAL H 118 AA8 3 ALA B 91 ? GLN B 98 ? ALA H 92 GLN H 99 AA8 4 VAL B 34 ? GLN B 39 ? VAL H 35 GLN H 40 AA8 5 GLU B 46 ? ILE B 51 ? GLU H 47 ILE H 52 AA8 6 ILE B 57 ? TYR B 59 ? ILE H 58 TYR H 60 AA9 1 LEU B 11 ? VAL B 12 ? LEU H 12 VAL H 13 AA9 2 THR B 113 ? VAL B 117 ? THR H 114 VAL H 118 AA9 3 ALA B 91 ? GLN B 98 ? ALA H 92 GLN H 99 AA9 4 MET B 106 ? TRP B 109 ? MET H 107 TRP H 110 AB1 1 THR B 141 ? ALA B 142 ? THR H 142 ALA H 143 AB1 2 VAL B 190 ? PRO B 191 ? VAL H 191 PRO H 192 AB2 1 GLY B 145 ? CYS B 146 ? GLY H 146 CYS H 147 AB2 2 SER B 186 ? VAL B 188 ? SER H 187 VAL H 189 AB2 3 VAL B 169 ? THR B 171 ? VAL H 170 THR H 172 AB3 1 LYS B 149 ? TYR B 151 ? LYS H 150 TYR H 152 AB3 2 TYR B 182 ? SER B 183 ? TYR H 183 SER H 184 AB3 3 VAL B 175 ? LEU B 176 ? VAL H 176 LEU H 177 AB4 1 THR B 157 ? SER B 159 ? THR H 158 SER H 160 AB4 2 TYR B 200 ? HIS B 206 ? TYR H 201 HIS H 207 AB4 3 THR B 211 ? VAL B 217 ? THR H 212 VAL H 218 AB5 1 LEU C 3 ? GLU C 4 ? LEU A 34 GLU A 35 AB5 2 PHE C 22 ? TYR C 23 ? PHE A 53 TYR A 54 AB6 1 VAL C 8 ? VAL C 9 ? VAL A 39 VAL A 40 AB6 2 ALA C 108 ? LEU C 112 ? ALA A 139 LEU A 143 AB6 3 GLY C 92 ? THR C 100 ? GLY A 123 THR A 131 AB6 4 VAL C 31 ? VAL C 39 ? VAL A 62 VAL A 70 AB6 5 ALA C 45 ? HIS C 52 ? ALA A 76 HIS A 83 AB6 6 GLY C 56 ? VAL C 59 ? GLY A 87 VAL A 90 AB7 1 ALA C 17 ? LEU C 19 ? ALA A 48 LEU A 50 AB7 2 VAL C 81 ? LEU C 83 ? VAL A 112 LEU A 114 AB7 3 VAL C 67 ? GLU C 68 ? VAL A 98 GLU A 99 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 5 ? N THR L 5 O LYS A 24 ? O LYS L 24 AA1 2 3 N CYS A 23 ? N CYS L 23 O PHE A 77 ? O PHE L 77 AA1 3 4 O THR A 78 ? O THR L 78 N SER A 71 ? N SER L 71 AA2 1 2 N LEU A 11 ? N LEU L 11 O LYS A 109 ? O LYS L 109 AA2 2 3 O THR A 108 ? O THR L 108 N TYR A 92 ? N TYR L 92 AA3 1 2 O LEU A 53 ? O LEU L 53 N TRP A 41 ? N TRP L 41 AA3 2 3 N ALA A 40 ? N ALA L 40 O GLN A 95 ? O GLN L 95 AA3 3 4 N GLN A 96 ? N GLN L 96 O THR A 103 ? O THR L 103 AA4 1 2 N PHE A 122 ? N PHE L 122 O LEU A 141 ? O LEU L 141 AA4 2 3 N VAL A 138 ? N VAL L 138 O LEU A 185 ? O LEU L 185 AA4 3 4 O SER A 180 ? O SER L 180 N THR A 170 ? N THR L 170 AA5 1 2 O ALA A 159 ? O ALA L 159 N VAL A 156 ? N VAL L 156 AA5 2 3 N GLN A 153 ? N GLN L 153 O GLU A 201 ? O GLU L 201 AA5 3 4 N CYS A 200 ? N CYS L 200 O LYS A 213 ? O LYS L 213 AA6 1 2 N SER B 7 ? N SER H 8 O THR B 21 ? O THR H 22 AA6 2 3 N CYS B 22 ? N CYS H 23 O VAL B 78 ? O VAL H 79 AA6 3 4 O VAL B 85 ? O VAL H 86 N GLU B 16 ? N GLU H 17 AA7 1 2 N SER B 7 ? N SER H 8 O THR B 21 ? O THR H 22 AA7 2 3 N CYS B 22 ? N CYS H 23 O VAL B 78 ? O VAL H 79 AA7 3 4 O GLN B 77 ? O GLN H 78 N ASP B 72 ? N ASP H 73 AA8 1 2 N VAL B 12 ? N VAL H 13 O THR B 116 ? O THR H 117 AA8 2 3 O THR B 113 ? O THR H 114 N TYR B 93 ? N TYR H 94 AA8 3 4 O TYR B 94 ? O TYR H 95 N ILE B 37 ? N ILE H 38 AA8 4 5 N TRP B 36 ? N TRP H 37 O ILE B 48 ? O ILE H 49 AA8 5 6 N VAL B 50 ? N VAL H 51 O TYR B 58 ? O TYR H 59 AA9 1 2 N VAL B 12 ? N VAL H 13 O THR B 116 ? O THR H 117 AA9 2 3 O THR B 113 ? O THR H 114 N TYR B 93 ? N TYR H 94 AA9 3 4 N LYS B 97 ? N LYS H 98 O TYR B 108 ? O TYR H 109 AB1 1 2 N ALA B 142 ? N ALA H 143 O VAL B 190 ? O VAL H 191 AB2 1 2 N CYS B 146 ? N CYS H 147 O SER B 186 ? O SER H 187 AB2 2 3 O VAL B 187 ? O VAL H 188 N HIS B 170 ? N HIS H 171 AB3 1 2 N TYR B 151 ? N TYR H 152 O TYR B 182 ? O TYR H 183 AB3 2 3 O SER B 183 ? O SER H 184 N VAL B 175 ? N VAL H 176 AB4 1 2 N SER B 159 ? N SER H 160 O ASN B 203 ? O ASN H 204 AB4 2 3 N VAL B 204 ? N VAL H 205 O VAL B 213 ? O VAL H 214 AB5 1 2 N GLU C 4 ? N GLU A 35 O PHE C 22 ? O PHE A 53 AB6 1 2 N VAL C 9 ? N VAL A 40 O ARG C 111 ? O ARG A 142 AB6 2 3 O ALA C 108 ? O ALA A 139 N CYS C 96 ? N CYS A 127 AB6 3 4 O SER C 99 ? O SER A 130 N GLN C 33 ? N GLN A 64 AB6 4 5 N ARG C 38 ? N ARG A 69 O GLN C 46 ? O GLN A 77 AB6 5 6 N HIS C 52 ? N HIS A 83 O GLY C 56 ? O GLY A 87 AB7 1 2 N ALA C 17 ? N ALA A 48 O LEU C 83 ? O LEU A 114 AB7 2 3 O LEU C 82 ? O LEU A 113 N GLU C 68 ? N GLU A 99 # _pdbx_entry_details.entry_id 9KKJ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 H _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 204 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OD1 _pdbx_validate_close_contact.auth_asym_id_2 H _pdbx_validate_close_contact.auth_comp_id_2 ASP _pdbx_validate_close_contact.auth_seq_id_2 215 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.07 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB L SER 120 ? A CA L SER 120 ? ? C L SER 120 ? ? 126.78 110.10 16.68 1.90 N 2 1 CB L SER 120 ? B CA L SER 120 ? ? C L SER 120 ? ? 128.49 110.10 18.39 1.90 N 3 1 N L SER 120 ? ? CA L SER 120 ? ? CB L SER 120 ? A 127.60 110.50 17.10 1.50 N 4 1 N L SER 120 ? ? CA L SER 120 ? ? CB L SER 120 ? B 125.80 110.50 15.30 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER L 7 ? ? -171.62 127.51 2 1 ALA L 57 ? ? 67.02 -47.49 3 1 ASN L 158 ? ? 56.02 19.86 4 1 ASP L 176 ? ? -142.86 26.10 5 1 SER L 177 ? ? 39.85 55.28 6 1 GLU H 17 ? ? -97.93 -157.32 7 1 SER H 20 ? ? -153.61 65.31 8 1 THR H 123 ? ? -102.87 78.44 9 1 SER H 134 ? ? 38.99 62.72 10 1 ASN H 162 ? ? 36.80 62.54 11 1 THR H 198 ? ? -102.41 -77.04 12 1 CYS A 52 ? ? -154.31 86.23 13 1 ASP A 71 ? ? -130.72 -55.57 14 1 ASN A 116 ? ? 38.09 62.72 15 1 GLU A 122 ? ? -38.64 126.23 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 TYR L 146 ? ? PRO L 147 ? ? 36.05 2 1 PHE A 132 ? ? PRO A 133 ? ? 36.70 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9KKJ _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9KKJ _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.26 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 152403 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Nectin-4 D1 domain in complex with the Fab fragment of 9MW2821 mAb' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3' # _em_imaging.entry_id 9KKJ _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2200 _em_imaging.calibrated_defocus_min 700 _em_imaging.calibrated_defocus_max 2500 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_vitrification.entry_id 9KKJ _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9KKJ _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H LYS 136 ? B LYS 135 2 1 Y 1 H SER 137 ? B SER 136 3 1 Y 1 H THR 138 ? B THR 137 4 1 Y 1 H SER 139 ? B SER 138 5 1 Y 1 H GLY 140 ? B GLY 139 6 1 Y 1 A GLY 32 ? C GLY 1 7 1 Y 1 A GLY 56 ? C GLY 25 8 1 Y 1 A ASP 57 ? C ASP 26 9 1 Y 1 A SER 58 ? C SER 27 10 1 Y 1 A GLY 59 ? C GLY 28 11 1 Y 1 A GLU 60 ? C GLU 29 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2024-11-13 _em_admin.deposition_site PDBJ _em_admin.entry_id 9KKJ _em_admin.last_update 2025-11-26 _em_admin.map_release_date 2025-11-19 _em_admin.title 'Structure of Nectin-4 D1 domain in complex with the Fab fragment of 9MW2821 mAb' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 20 mmol/L Tris-HCl 1 'Tris (hydroxymethyl)aminomethane hydrochloride' 1 200 mmol/L NaCl 2 'sodium chloride' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 10090 _em_entity_assembly_naturalsource.organism 'Mus musculus' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9KKJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #