HEADER VIRAL PROTEIN 16-NOV-24 9KMO TITLE HR1 DOMAIN FROM HCOV-OC43 IN COMPLEX WITH A PAN-COV INHIBITOR EK1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S2'; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HUMAN CORONAVIRUS OC43; SOURCE 4 ORGANISM_TAXID: 31631 KEYWDS HR1, EK1, OC43, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.YAN REVDAT 1 14-JAN-26 9KMO 0 JRNL AUTH X.HE,H.LIU,G.YANG,L.YAN JRNL TITL STRUCTURES OF HCOV-OC43 HR1 DOMAIN IN COMPLEX WITH COGNATE JRNL TITL 2 HR2 OR ANALOGUE EK1 PEPTIDE. JRNL REF VIRUSES V. 17 2025 JRNL REFN ESSN 1999-4915 JRNL PMID 40143271 JRNL DOI 10.3390/V17030343 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 5326 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.282 REMARK 3 FREE R VALUE : 0.311 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9KMO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 19-NOV-24. REMARK 100 THE DEPOSITION ID IS D_1300053881. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : BRUKER PHOTON 100 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5336 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1 M TRIS PH 8.5, AND REMARK 280 30% PEG 4K, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 26.50700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -45.91147 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 53.01400 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -26.50700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -45.91147 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 26.50700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -45.91147 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ACE A 16 REMARK 465 GLN A 91 REMARK 465 ACE B 16 REMARK 465 GLN B 91 REMARK 465 ILE B 92 REMARK 465 ASN B 93 REMARK 465 VAL B 94 REMARK 465 ILE B 118 REMARK 465 ACE C 16 REMARK 465 GLN C 90 REMARK 465 GLN C 91 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 28 OE2 GLU A 114 1.10 REMARK 500 NE2 GLN B 28 OE2 GLU B 114 1.12 REMARK 500 CD GLN A 28 OE2 GLU A 114 1.42 REMARK 500 O MET C 103 N LYS C 104 1.57 REMARK 500 OE1 GLN A 28 OE2 GLU A 114 1.63 REMARK 500 NE2 GLN A 28 CD GLU A 114 1.64 REMARK 500 O LYS C 112 OG SER C 116 1.94 REMARK 500 CD1 TYR B 101 OE2 GLU C 114 2.04 REMARK 500 CE1 TYR B 101 OE2 GLU C 114 2.07 REMARK 500 CD1 TYR B 101 NZ LYS C 111 2.09 REMARK 500 NE2 GLN A 28 OE1 GLU A 114 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 108 CD2 TYR C 101 3545 0.68 REMARK 500 OE1 GLU A 108 CG TYR C 101 3545 0.80 REMARK 500 CD GLU A 108 CD2 TYR C 101 3545 1.15 REMARK 500 OE2 GLU A 108 CE2 TYR C 101 3545 1.27 REMARK 500 CD GLU A 108 CG TYR C 101 3545 1.34 REMARK 500 OE1 GLU A 108 CD1 TYR C 101 3545 1.52 REMARK 500 OE1 GLU A 108 CB TYR C 101 3545 1.56 REMARK 500 CD GLU A 108 CE2 TYR C 101 3545 1.67 REMARK 500 OE1 GLU A 108 CD2 TYR C 101 3545 1.81 REMARK 500 CG GLU A 108 CZ TYR C 101 3545 1.81 REMARK 500 CD GLU A 108 CD1 TYR C 101 3545 1.90 REMARK 500 OE2 GLU A 108 CG TYR C 101 3545 1.95 REMARK 500 CG GLU A 108 CE1 TYR C 101 3545 2.02 REMARK 500 CG GLU A 108 CE2 TYR C 101 3545 2.09 REMARK 500 OE1 GLU B 29 NZ LYS C 104 2555 2.09 REMARK 500 CD GLU A 108 CZ TYR C 101 3545 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET C 103 C LYS C 104 N -0.770 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS C 104 C - N - CA ANGL. DEV. = 16.8 DEGREES REMARK 500 LYS C 104 CA - C - N ANGL. DEV. = 17.6 DEGREES REMARK 500 LYS C 104 O - C - N ANGL. DEV. = -17.4 DEGREES REMARK 500 LYS C 111 O - C - N ANGL. DEV. = -13.5 DEGREES REMARK 500 LYS C 112 CA - C - N ANGL. DEV. = -17.3 DEGREES REMARK 500 LYS C 112 O - C - N ANGL. DEV. = 17.1 DEGREES REMARK 500 LEU C 113 C - N - CA ANGL. DEV. = -16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 93 66.50 -161.98 REMARK 500 ASN C 93 66.50 -161.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 MET C 103 12.06 REMARK 500 LYS C 111 -14.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 9KMO A 17 91 UNP P36334 SPIKE_CVHOC 1008 1049 DBREF 9KMO A 92 118 UNP P36334 SPIKE_CVHOC 1256 1282 DBREF 9KMO B 17 91 UNP P36334 SPIKE_CVHOC 1008 1049 DBREF 9KMO B 92 118 UNP P36334 SPIKE_CVHOC 1256 1282 DBREF 9KMO C 17 91 UNP P36334 SPIKE_CVHOC 1008 1049 DBREF 9KMO C 92 118 UNP P36334 SPIKE_CVHOC 1256 1282 SEQADV 9KMO ACE A 16 UNP P36334 ACETYLATION SEQADV 9KMO ASP A 25 UNP P36334 TYR 1016 CONFLICT SEQADV 9KMO GLU A 100 UNP P36334 GLN 1264 CONFLICT SEQADV 9KMO TYR A 101 UNP P36334 VAL 1265 CONFLICT SEQADV 9KMO LYS A 104 UNP P36334 ASN 1268 CONFLICT SEQADV 9KMO LYS A 105 UNP P36334 ARG 1269 CONFLICT SEQADV 9KMO GLU A 107 UNP P36334 GLN 1271 CONFLICT SEQADV 9KMO LYS A 112 UNP P36334 VAL 1276 CONFLICT SEQADV 9KMO GLU A 114 UNP P36334 ASN 1278 CONFLICT SEQADV 9KMO GLU A 115 UNP P36334 GLN 1279 CONFLICT SEQADV 9KMO ACE B 16 UNP P36334 ACETYLATION SEQADV 9KMO ASP B 25 UNP P36334 TYR 1016 CONFLICT SEQADV 9KMO GLU B 100 UNP P36334 GLN 1264 CONFLICT SEQADV 9KMO TYR B 101 UNP P36334 VAL 1265 CONFLICT SEQADV 9KMO LYS B 104 UNP P36334 ASN 1268 CONFLICT SEQADV 9KMO LYS B 105 UNP P36334 ARG 1269 CONFLICT SEQADV 9KMO GLU B 107 UNP P36334 GLN 1271 CONFLICT SEQADV 9KMO LYS B 112 UNP P36334 VAL 1276 CONFLICT SEQADV 9KMO GLU B 114 UNP P36334 ASN 1278 CONFLICT SEQADV 9KMO GLU B 115 UNP P36334 GLN 1279 CONFLICT SEQADV 9KMO ACE C 16 UNP P36334 ACETYLATION SEQADV 9KMO ASP C 25 UNP P36334 TYR 1016 CONFLICT SEQADV 9KMO GLU C 100 UNP P36334 GLN 1264 CONFLICT SEQADV 9KMO TYR C 101 UNP P36334 VAL 1265 CONFLICT SEQADV 9KMO LYS C 104 UNP P36334 ASN 1268 CONFLICT SEQADV 9KMO LYS C 105 UNP P36334 ARG 1269 CONFLICT SEQADV 9KMO GLU C 107 UNP P36334 GLN 1271 CONFLICT SEQADV 9KMO LYS C 112 UNP P36334 VAL 1276 CONFLICT SEQADV 9KMO GLU C 114 UNP P36334 ASN 1278 CONFLICT SEQADV 9KMO GLU C 115 UNP P36334 GLN 1279 CONFLICT SEQRES 1 A 70 ACE ALA ASN ALA PHE ASN ASN ALA LEU ASP ALA ILE GLN SEQRES 2 A 70 GLU GLY PHE ASP ALA THR ASN SER ALA LEU VAL LYS ILE SEQRES 3 A 70 GLN ALA VAL VAL ASN ALA ASN ALA GLU ALA LEU ASN ASN SEQRES 4 A 70 LEU LEU GLN GLN ILE ASN VAL THR PHE LEU ASP LEU GLU SEQRES 5 A 70 TYR GLU MET LYS LYS LEU GLU GLU ALA ILE LYS LYS LEU SEQRES 6 A 70 GLU GLU SER TYR ILE SEQRES 1 B 70 ACE ALA ASN ALA PHE ASN ASN ALA LEU ASP ALA ILE GLN SEQRES 2 B 70 GLU GLY PHE ASP ALA THR ASN SER ALA LEU VAL LYS ILE SEQRES 3 B 70 GLN ALA VAL VAL ASN ALA ASN ALA GLU ALA LEU ASN ASN SEQRES 4 B 70 LEU LEU GLN GLN ILE ASN VAL THR PHE LEU ASP LEU GLU SEQRES 5 B 70 TYR GLU MET LYS LYS LEU GLU GLU ALA ILE LYS LYS LEU SEQRES 6 B 70 GLU GLU SER TYR ILE SEQRES 1 C 70 ACE ALA ASN ALA PHE ASN ASN ALA LEU ASP ALA ILE GLN SEQRES 2 C 70 GLU GLY PHE ASP ALA THR ASN SER ALA LEU VAL LYS ILE SEQRES 3 C 70 GLN ALA VAL VAL ASN ALA ASN ALA GLU ALA LEU ASN ASN SEQRES 4 C 70 LEU LEU GLN GLN ILE ASN VAL THR PHE LEU ASP LEU GLU SEQRES 5 C 70 TYR GLU MET LYS LYS LEU GLU GLU ALA ILE LYS LYS LEU SEQRES 6 C 70 GLU GLU SER TYR ILE HELIX 1 AA1 ALA A 17 LEU A 56 1 40 HELIX 2 AA2 LEU A 99 GLU A 115 1 17 HELIX 3 AA3 ASN B 18 LEU B 56 1 39 HELIX 4 AA4 LEU B 99 GLU B 114 1 16 HELIX 5 AA5 GLU B 115 TYR B 117 5 3 HELIX 6 AA6 ASN C 18 LEU C 56 1 39 HELIX 7 AA7 LEU C 99 GLU C 115 1 17 CRYST1 53.014 53.014 62.175 90.00 90.00 120.00 P 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018863 0.010891 0.000000 0.00000 SCALE2 0.000000 0.021781 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016084 0.00000 TER 531 ILE A 118 TER 1031 TYR B 117 TER 1553 ILE C 118 MASTER 379 0 0 7 0 0 0 6 1550 3 0 18 END